CmaCh19G010420 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G010420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Small ubiquitin-related modifier
Location	Cma_Chr19: 8835747 .. 8836961 (-)
RNA-Seq Expression	CmaCh19G010420
Synteny	CmaCh19G010420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACAACGATGGATGAAAATCAGGAAGCACCGACCCGGAAACCCGAAGCACAACCCGGAACGAACTATGTCAACGTGAAGGTCAACGGGCAGGTTCTGTTTCGATCTCCGATTTCAGTGTTTTTTGGACGAATCCTTAAAACGCTCGAAATGAAAGTGAAGTTTTATTTGATTGGTAGGATGGGAGTGAAGTATATTTCAGGATTTGTAAGAGGACGCAACTCAGTAAACTTATGAAAGGGTACTGTAAACGACAAGCATTGGAGCTGAGAACCATTGCGTTTCTGTTGGACGGCCATGCCATTGCCGGAAACCAAACAGCCGATGAGGTTGTTTTTTTCGAACCTCTTCTTTTTTTGGGTTTTGGTTTGGTTTTTTTATCCCAATTTCTGTGTGTCGGTTCGATTCGATTCTCAGCTGGGAATGGAGGATGGGGATGAAATTGATGCTATGAAACACCACGGCGGCGGCGGTGGCGGCGGAAGACTAAAGTGGGTCTTTTCATGTCTCTGAAAAATGGTCACCGATCCGGCGAACTGGTTTTTGGGTTGTCGTAAAATCATGAAACCACCGAACATGTTAAGAAACGACAACGTTTTGGATTTGGTTTTACCCTGCTCATTGAGTGACCTTCCTCGCACGTGCAAGCTGTTTTGTGTGTGAATATTAAGGATTTAATACCATTTTATGATATATTTAATTTAGGTTATCTCTTATTTTACTTTATTCGATTTTAAAAATTATTATTTTAGTTATTTTAGTTATAACCTCTTGAGATCCTGAGGGCCCAAATTGAAAAAAGCCCGGCCCATATTGAGATCAACGTCAGAAATTAGGGCTACAAATTCAGGGCCCCTAAACTCACGGCCTCTCTCGCCTCCATAAATACCGACCAATCTCCGTCGTCATCTTCATCTTTCTGAAGTTGAATTCTTCCCTAATTATGATTCCTTTTATTTCAGCGGCTTTGGATTTCTTTCGATTCGAGTTAGCAATACGATTTGTTGGTTTAGGGTTTAGAGTTTGAATCCAATGAGGAAGCTCTCCCAAAATTGATAGGAAGTGCCGTATGACACTCCAAATCGCAGCGAGAAGCCACTCGACTGTGGTTCCCATCCGCCAGTGAGCTCCGTCTCCGATTCGTCTCTTTACCGGAGCGATCTGGTTTCTTCGGGGTTTTTACTGGTCGGGAATTTGCAGCCGGTTATGTGA

mRNA sequence

ATGTCGACAACGATGGATGAAAATCAGGAAGCACCGACCCGGAAACCCGAAGCACAACCCGGAACGAACTATGTCAACGTGAAGGTCAACGGGCAGGATGGGAGTGAAGTATATTTCAGGATTTGTAAGAGGACGCAACTCAGTAAACTTATGAAAGGGTACTGTAAACGACAAGCATTGGAGCTGAGAACCATTGCGTTTCTGTTGGACGGCCATGCCATTGCCGGAAACCAAACAGCCGATGAGCTGGGAATGGAGGATGGGGATGAAATTGATGCTATGAAACACCACGGCGGCGGCGGTGGCGGCGGAAGACTAAAGTGGGAAGTGCCGTATGACACTCCAAATCGCAGCGAGAAGCCACTCGACTGTGGTTCCCATCCGCCAGTGAGCTCCGTCTCCGATTCGTCTCTTTACCGGAGCGATCTGGTTTCTTCGGGGTTTTTACTGGTCGGGAATTTGCAGCCGGTTATGTGA

Coding sequence (CDS)

ATGTCGACAACGATGGATGAAAATCAGGAAGCACCGACCCGGAAACCCGAAGCACAACCCGGAACGAACTATGTCAACGTGAAGGTCAACGGGCAGGATGGGAGTGAAGTATATTTCAGGATTTGTAAGAGGACGCAACTCAGTAAACTTATGAAAGGGTACTGTAAACGACAAGCATTGGAGCTGAGAACCATTGCGTTTCTGTTGGACGGCCATGCCATTGCCGGAAACCAAACAGCCGATGAGCTGGGAATGGAGGATGGGGATGAAATTGATGCTATGAAACACCACGGCGGCGGCGGTGGCGGCGGAAGACTAAAGTGGGAAGTGCCGTATGACACTCCAAATCGCAGCGAGAAGCCACTCGACTGTGGTTCCCATCCGCCAGTGAGCTCCGTCTCCGATTCGTCTCTTTACCGGAGCGATCTGGTTTCTTCGGGGTTTTTACTGGTCGGGAATTTGCAGCCGGTTATGTGA

Protein sequence

MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKWEVPYDTPNRSEKPLDCGSHPPVSSVSDSSLYRSDLVSSGFLLVGNLQPVM

Homology

[Close]

BLAST of CmaCh19G010420 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-22
Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 5   MDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRT 64
           M  NQE   +KP    G  ++N+KV GQDG+EV+FRI + TQL KLM  YC RQ++++ +
Sbjct: 1   MSANQE-EDKKP--GDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNS 60

Query: 65  IAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGG 105
           IAFL DG  +   QT DEL MEDGDEIDAM H  GG GGG
Sbjct: 61  IAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSGGG 97

[Close]

BLAST of CmaCh19G010420 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.1e-21
Identity = 50/88 (56.82%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 14  RKPE-AQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTIAFLLDGH 73
           +KP   + G  ++N+KV GQDG+EV+FRI + TQL KLM  YC RQ++++  IAFL DG 
Sbjct: 9   KKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGR 68

Query: 74  AIAGNQTADELGMEDGDEIDAMKHHGGG 101
            + G QT DEL MEDGDEIDAM H  GG
Sbjct: 69  RLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]

BLAST of CmaCh19G010420 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.9e-21
Identity = 55/107 (51.40%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 1   MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60
           MS T +E+     +KP+      ++N+KV GQDG+EV+FRI + TQL KLM  YC RQ++
Sbjct: 1   MSATPEED-----KKPDQGA---HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLK 108
           +  +IAFL DG  +   QT DEL MEDGDEIDAM H  GGG    LK
Sbjct: 61  DFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGAKNGLK 99

[Close]

BLAST of CmaCh19G010420 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-16
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 13  TRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTIAFLLDGH 72
           T + + +P T ++N+KV GQD +EV+F+I K T+ SKLMK YC RQ   + ++ FL+DG 
Sbjct: 24  TSQQDVKPSTEHINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGE 83

Query: 73  AIAGNQTADELGMEDGDEIDAMKHHGGG 101
            I  +QT  EL MEDGD+I+A+    GG
Sbjct: 84  RIRPDQTPAELDMEDGDQIEAVLEQLGG 111

[Close]

BLAST of CmaCh19G010420 vs. ExPASy Swiss-Prot
Match: Q9Z172 (Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 8   NQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTIAF 67
           ++E P  K   +   +++N+KV GQDGS V F+I + T LSKLMK YC+RQ L +R I F
Sbjct: 2   SEEKP--KEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRF 61

Query: 68  LLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKWEVPYDTPNR 118
             DG  I    T  +L MED D ID  +   GG      +  VP  TPNR
Sbjct: 62  RFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGSAS---RGSVP--TPNR 104

[Close]

BLAST of CmaCh19G010420 vs. ExPASy TrEMBL
Match: A0A6J1I0U8 (small ubiquitin-related modifier 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468415 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60
           MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL
Sbjct: 1   MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60

Query: 61  ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW 109
           ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW
Sbjct: 61  ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW 108

[Close]

BLAST of CmaCh19G010420 vs. ExPASy TrEMBL
Match: A0A6J1GLF8 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111455344 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.7e-48
Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MSTTMDENQEAPTRKPEAQPGT-NYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQA 60
           MSTTMDENQEAP RKPEA+PG  NYVNVKVNGQDGSEVYFRICKRTQLSKLMK YCKRQA
Sbjct: 1   MSTTMDENQEAPIRKPEAEPGNPNYVNVKVNGQDGSEVYFRICKRTQLSKLMKAYCKRQA 60

Query: 61  LELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW 109
           LELRTIAFLLDGHAIAGNQTADELGMEDGD+IDAMKHH GGGGGGR+KW
Sbjct: 61  LELRTIAFLLDGHAIAGNQTADELGMEDGDKIDAMKHH-GGGGGGRVKW 108

[Close]

BLAST of CmaCh19G010420 vs. ExPASy TrEMBL
Match: A0A6J1HW85 (small ubiquitin-related modifier 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468415 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.5e-38
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60
          MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL
Sbjct: 1  MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60

Query: 61 ELRTIAFLLDGHAIAGNQTADEL 84
          ELRTIAFLLDGHAIAGNQTADE+
Sbjct: 61 ELRTIAFLLDGHAIAGNQTADEV 83

[Close]

BLAST of CmaCh19G010420 vs. ExPASy TrEMBL
Match: A0A5A7V249 (Small ubiquitin-related modifier 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00130 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 74/104 (71.15%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 1   MSTTMDE-NQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQA 60
           MST+M+  + E  TRK E +P + YVN+KVNGQDGSEVYFRI K+++LSKLM  YCKRQ 
Sbjct: 1   MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQE 60

Query: 61  LELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGG 104
           LE  TIAFL+DGH IAG QTA+ELG+EDGDEIDAMKHH GGGGG
Sbjct: 61  LEFSTIAFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG 104

[Close]

BLAST of CmaCh19G010420 vs. ExPASy TrEMBL
Match: A0A6J1D1W9 (small ubiquitin-related modifier 1-like OS=Momordica charantia OX=3673 GN=LOC111016840 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 8.2e-29
Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 9   QEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTIAFL 68
           +E  TRKPE++P   YVN+KVNGQDGSEVYFR+ K+TQL KLM  YC+RQ  + R +AFL
Sbjct: 4   REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFL 63

Query: 69  LDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGG 103
           LDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Sbjct: 64  LDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG 97

[Close]

BLAST of CmaCh19G010420 vs. NCBI nr
Match: XP_022969393.1 (small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-54
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60
           MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL
Sbjct: 1   MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60

Query: 61  ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW 109
           ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW
Sbjct: 61  ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW 108

[Close]

BLAST of CmaCh19G010420 vs. NCBI nr
Match: XP_022952738.1 (small ubiquitin-related modifier 1-like [Cucurbita moschata])

HSP 1 Score: 201.4 bits (511), Expect = 5.6e-48
Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 0


Query: 1   MSTTMDENQEAPTRKPEAQPGT-NYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQA 60
           MSTTMDENQEAP RKPEA+PG  NYVNVKVNGQDGSEVYFRICKRTQLSKLMK YCKRQA
Sbjct: 1   MSTTMDENQEAPIRKPEAEPGNPNYVNVKVNGQDGSEVYFRICKRTQLSKLMKAYCKRQA 60

Query: 61  LELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW 109
           LELRTIAFLLDGHAIAGNQTADELGMEDGD+IDAMKHH GGGGGGR+KW
Sbjct: 61  LELRTIAFLLDGHAIAGNQTADELGMEDGDKIDAMKHH-GGGGGGRVKW 108

[Close]

BLAST of CmaCh19G010420 vs. NCBI nr
Match: XP_023553983.1 (small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200.7 bits (509), Expect = 9.6e-48
Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60
           MSTTMDEN+EAPTRKPEA+PG+ YVNVKVNGQDGSEVYFRICKRTQLS+LMK YCKRQAL
Sbjct: 1   MSTTMDENREAPTRKPEAEPGSKYVNVKVNGQDGSEVYFRICKRTQLSELMKAYCKRQAL 60

Query: 61  ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW 109
           EL TIAFLLDGHAI GNQTADELGMEDGDEIDAMKHH GGGGGGR+KW
Sbjct: 61  ELGTIAFLLDGHAIVGNQTADELGMEDGDEIDAMKHH-GGGGGGRVKW 107

[Close]

BLAST of CmaCh19G010420 vs. NCBI nr
Match: XP_022969392.1 (small ubiquitin-related modifier 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 168.3 bits (425), Expect = 5.3e-38
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60
          MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL
Sbjct: 1  MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60

Query: 61 ELRTIAFLLDGHAIAGNQTADEL 84
          ELRTIAFLLDGHAIAGNQTADE+
Sbjct: 61 ELRTIAFLLDGHAIAGNQTADEV 83

[Close]

BLAST of CmaCh19G010420 vs. NCBI nr
Match: XP_038888534.1 (small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 154.5 bits (389), Expect = 7.9e-34
Identity = 75/98 (76.53%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 6   DENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTI 65
           +++ E   RKPE++P + YVN+KVNGQDGSEVYFRI KRTQL KLMK YCKRQ LELRTI
Sbjct: 7   NDSDEETVRKPESKPDSEYVNLKVNGQDGSEVYFRIFKRTQLKKLMKSYCKRQGLELRTI 66

Query: 66  AFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGG 104
           AFLLDGH+IAG QTA+EL MEDGDEIDAMKHHGGG  G
Sbjct: 67  AFLLDGHSIAGTQTAEELEMEDGDEIDAMKHHGGGSDG 104

[Close]

BLAST of CmaCh19G010420 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-23
Identity = 56/100 (56.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 5   MDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRT 64
           M  NQE   +KP    G  ++N+KV GQDG+EV+FRI + TQL KLM  YC RQ++++ +
Sbjct: 1   MSANQE-EDKKP--GDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNS 60

Query: 65  IAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGG 105
           IAFL DG  +   QT DEL MEDGDEIDAM H  GG GGG
Sbjct: 61  IAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGSGGG 97

[Close]

BLAST of CmaCh19G010420 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 101.7 bits (252), Expect = 5.6e-22
Identity = 55/107 (51.40%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 1   MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQAL 60
           MS T +E+     +KP+      ++N+KV GQDG+EV+FRI + TQL KLM  YC RQ++
Sbjct: 1   MSATPEED-----KKPDQGA---HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV 60

Query: 61  ELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLK 108
           +  +IAFL DG  +   QT DEL MEDGDEIDAM H  GGG    LK
Sbjct: 61  DFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGAKNGLK 99

[Close]

BLAST of CmaCh19G010420 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-19
Identity = 55/120 (45.83%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 1   MSTTMDENQEAPTRKPEAQPGTNYVNVKVNGQ-------------DGSEVYFRICKRTQL 60
           MS T +E+     +KP+      ++N+KV GQ             DG+EV+FRI + TQL
Sbjct: 1   MSATPEED-----KKPDQGA---HINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQL 60

Query: 61  SKLMKGYCKRQALELRTIAFLLDGHAIAGNQTADELGMEDGDEIDAMKHHGGGGGGGRLK 108
            KLM  YC RQ+++  +IAFL DG  +   QT DEL MEDGDEIDAM H  GGG    LK
Sbjct: 61  KKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGAKNGLK 112

[Close]

BLAST of CmaCh19G010420 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 42/94 (44.68%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 15  KPEAQPGTNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTIAFLLDGHAI 74
           KP  Q    +V +KV  QDG EV F+  K   L KLM  YC R+ L+L   AF+ +G  I
Sbjct: 8   KPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNGARI 67

Query: 75  AGNQTADELGMEDGDEIDAMKHHGGGGGGGRLKW 109
            G +T DEL MEDGD IDA +   GG    + +W
Sbjct: 68  GGLETPDELDMEDGDVIDACRAMSGGLRANQRQW 101

[Close]

BLAST of CmaCh19G010420 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 22  TNYVNVKVNGQDGSEVYFRICKRTQLSKLMKGYCKRQALELRTIAFLLDGHAIAGNQTAD 81
           ++++ VKV  QD   VYFRI +  +L K+M  Y  +  +E+ T+ FL DG+ I  NQT +
Sbjct: 12  SSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRIKLNQTPN 71

Query: 82  ELGMEDGDEIDAMKHHGGG 101
           ELG+ED DEI+A     GG
Sbjct: 72  ELGLEDEDEIEAFGEQLGG 90

The following BLAST results are available for this feature:

BLAST of CmaCh19G010420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	4.2e-22	56.00	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
P55857	6.1e-21	56.82	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FLP6	7.9e-21	51.40	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
O13351	2.0e-16	47.73	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9Z172	1.2e-13	43.64	Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=1 SV=1	[more]

BLAST of CmaCh19G010420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0U8	1.1e-54	100.00	small ubiquitin-related modifier 1-like isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1GLF8	2.7e-48	92.66	Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111455344 P...	[more]
A0A6J1HW85	2.5e-38	98.80	small ubiquitin-related modifier 1-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A5A7V249	1.0e-31	71.15	Small ubiquitin-related modifier 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1D1W9	8.2e-29	67.02	small ubiquitin-related modifier 1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of CmaCh19G010420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969393.1	2.4e-54	100.00	small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]	[more]
XP_022952738.1	5.6e-48	92.66	small ubiquitin-related modifier 1-like [Cucurbita moschata]	[more]
XP_023553983.1	9.6e-48	90.74	small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022969392.1	5.3e-38	98.80	small ubiquitin-related modifier 1-like isoform X1 [Cucurbita maxima]	[more]
XP_038888534.1	7.9e-34	76.53	small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]	[more]

BLAST of CmaCh19G010420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26840.1	3.0e-23	56.00	small ubiquitin-like modifier 1	[more]
AT5G55160.1	5.6e-22	51.40	small ubiquitin-like modifier 2	[more]
AT5G55160.2	3.4e-19	45.83	small ubiquitin-like modifier 2	[more]
AT5G55170.1	1.3e-13	44.68	small ubiquitin-like modifier 3	[more]
AT5G55856.1	3.1e-12	44.30	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 26..94 e-value: 3.8E-17 score: 61.8
None	No IPR available	GENE3D	3.10.20.90		coord: 1..100 e-value: 2.6E-28 score: 100.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 1..100
None	No IPR available	PANTHER	PTHR10562:SF104	SMALL UBIQUITIN-RELATED MODIFIER 3	coord: 1..100
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 24..96 e-value: 9.0058E-35 score: 114.248
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 23..100 score: 10.331637
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 12..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G010420.1	CmaCh19G010420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding