CmaCh19G008960 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G008960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	translation initiation factor IF-2 isoform X1
Location	Cma_Chr19: 8180921 .. 8183395 (+)
RNA-Seq Expression	CmaCh19G008960
Synteny	CmaCh19G008960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTAAATTTATAATTTTATTTTCCTAAAAGAATTTCCATTGTGACAGTTAAAACAAAACTATTCATACATGGTGAAAAAGAAATCTTAAAAATAGTTTGTTCTTGTAACGGGGGGTTTTGGCATGTGAGCTGCATTGGCCTGCCCTCAATCCATGATCTTCCTTCGACGACACCTCAAAACGGTGTTGTCTTCAACAATCTCCCCAATGCCAAGCAATCCATTTTCCGTTCCATTATAAAATCCTCTCTACCTCCTTCTCTTTCTTCTTCCTCCAGATCCTCTCGACGTTCATAATTCTTCTGTAATTCCAACAGCTTTAAAGATCCATATTGGCGGTGGTGGATGGCAAAAACCAACAAATACACCTCCATCAATTACAATCACATCTACGACAAGGATCTCTCCCCCAATTCCAAAACTGGCAACAATCCCTCCAAAAACCCATCTTCTTCTTCTTCTTCTTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCGCTAACAAGTCCCATGGCCGCATGCTCGTCCTGACCCGTCCCACTCCCAAACCCATCTCTTCGCTGCCGGTCCTGTCCCCTCAGCCTCAATCTCGATCCCCATCTGCCGATCCTCGTCCTGTTGCGGATCAGACCCATCCGCAATGCGAATCCGATTCCATCTCTCTTCGCCCTCTCGGTCGGACAGGTACGGGCGCGATCGCTCCGTCTCCGATTCCGAACTTGGAGAAGGACAAGGAGATTCCTCCTCCGACTGTTACGTTGCATAAACCGGAGAAATTTGTGCCGCCTCACCTCAGGGCGGGCTTCGTCGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTATGGGAATTACGGGTCTCCGGGTCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGCAAATGAGAGAATGAACGGGGCGGGAGAGGCAGATCAGGGGGAGATGGTGAATCGACCAAGATCCAGTGGCAATCGCCCGAATTCTAGTGGATGGTATGTTTCTCTCAAATACCATCAACGTGTAGTTAACTGTAGTTGCAATTGAAAACTAATTTTGGCCCTGCATTTTGGGTATGGAATTGCCTTCTGTGGATGCCCTGTTACCATTGAACTGAGATGCTGTTGTGGCTTTTTGAGTTTATTACGAGATTCTCTTGATGTAGTTGACTGTCTAAAGATGAATCAATTCATTTATAATCTCGTGAGTAAATTATAGAGTAGATGGCTCCTTTTGTCTCAATGAATTGGGATTAGGACACTTCCTGGCACTGCATTATAAGGTATGGAATTGCCTTATTTGGATGCCCTTTTACCATGGCACTGCATTATGAGTTTGATTTTTATGAGATTCTCTTGATTTTGAAAGGCTCTGTGGAGATGAATCAATCCATTTCATGGCTCCTTTTTTGGGTCTCTGTATTTAGACTTCTAAGTGTTGGCCTATAAGATGTAAAAGTTTCTTAGGATAGTTTGAAGGTTTGGTTTGACCTGTTAGATGAACACGACTCTCTATAATGGTATGACATTGTCCACTTTGAGCATAAGCTCTCGTGGTTGCTTTGGGCTTCCCCAAAATGCCTCGTACCAGTGGAGATAGTATTCCTCACTTATAAACCCACGATAATTTTCTAAATTAGTCGACGTGGGACTTTCATCCTCCAACATGACCTATTGGAGACGCATAATACAAAATCCATAATTTTCTACCAGGAAAATGTAGAAGCCTCCAAAAGAACGGCCCAAATAGACCATCTTGCTTATCTCCCAGCACAGCCATCTCATTTTCAGACTTCTTGATTGCATGCTACACGTAATCTCCCAAATCCAAATAACATCACATCATATTCTATTCCTTTGATGACACGACGCAAGGAAAACAATCAAACACAGCCCCAAAAGTTCATCTTGCTTTTGCTTTACTTGTTTGTGTTCATATCATTAATTTCCTGTTGTAAACATTGCTTTCATTCAATTTGTATTCTCACTGAATTTATGTTGGCGACGAATAGTGCTTCAAGGGATTCATTCTGAAGTTGGATACTTTTCCAAGGATGAAGATGGATCACGTCGTCGAAGTTTTTACTTTTTAGAATTGTTTGCCATGGAAGATAAACGGACACCACACCAAGGTGACAGGATCTCAACAATGAAGTGACGTACTTCAGATTCAGATTGTTATACCTCAAGGAAACTATGTTTCTTTGGCTTCTTCACCCTTCTTCTGCATTCCTGGAGAGGGATGGAAGCTCGTTTGGAATGTAGAACTGACCGGTGTTATGTATTGTCGTCATTTTCGTCGTCGTAGTTGTTTAACTGCTTTTAGATCAGGGTTAGCATCTTGTGTGGAGGATGCTGCTGTGTTTTTCATTTTTCATCTCACAGTTTGTAAAACAAAGTTTCTTCTGGTGTGTGAGGATGTTAGGTTTCTTTGA

mRNA sequence

TTCTAAATTTATAATTTTATTTTCCTAAAAGAATTTCCATTGTGACAGTTAAAACAAAACTATTCATACATGGTGAAAAAGAAATCTTAAAAATAGTTTGTTCTTGTAACGGGGGGTTTTGGCATGTGAGCTGCATTGGCCTGCCCTCAATCCATGATCTTCCTTCGACGACACCTCAAAACGGTGTTGTCTTCAACAATCTCCCCAATGCCAAGCAATCCATTTTCCGTTCCATTATAAAATCCTCTCTACCTCCTTCTCTTTCTTCTTCCTCCAGATCCTCTCGACGTTCATAATTCTTCTGTAATTCCAACAGCTTTAAAGATCCATATTGGCGGTGGTGGATGGCAAAAACCAACAAATACACCTCCATCAATTACAATCACATCTACGACAAGGATCTCTCCCCCAATTCCAAAACTGGCAACAATCCCTCCAAAAACCCATCTTCTTCTTCTTCTTCTTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCGCTAACAAGTCCCATGGCCGCATGCTCGTCCTGACCCGTCCCACTCCCAAACCCATCTCTTCGCTGCCGGTCCTGTCCCCTCAGCCTCAATCTCGATCCCCATCTGCCGATCCTCGTCCTGTTGCGGATCAGACCCATCCGCAATGCGAATCCGATTCCATCTCTCTTCGCCCTCTCGGTCGGACAGGTACGGGCGCGATCGCTCCGTCTCCGATTCCGAACTTGGAGAAGGACAAGGAGATTCCTCCTCCGACTGTTACGTTGCATAAACCGGAGAAATTTGTGCCGCCTCACCTCAGGGCGGGCTTCGTCGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTATGGGAATTACGGGTCTCCGGGTCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGCAAATGAGAGAATGAACGGGGCGGGAGAGGCAGATCAGGGGGAGATGGTGAATCGACCAAGATCCAGTGGCAATCGCCCGAATTCTAGTGGATGGCTCTGTGGAGATGAATCAATCCATTTCATGGCTCCTTTTTTGGTGCTTCAAGGGATTCATTCTGAAGTTGGATACTTTTCCAAGGATGAAGATGGATCACGTCGTCGAAGTTTTTACTTTTTAGAATTGTTTGCCATGGAAGATAAACGGACACCACACCAAGGAAACTATGTTTCTTTGGCTTCTTCACCCTTCTTCTGCATTCCTGGAGAGGGATGGAAGCTCGTTTGGAATGTAGAACTGACCGGTGTTATGTATTGTCGTCATTTTCGTCGTCGTAGTTGTTTAACTGCTTTTAGATCAGGGTTAGCATCTTGTGTGGAGGATGCTGCTGTGTTTTTCATTTTTCATCTCACAGTTTGTAAAACAAAGTTTCTTCTGGTGTGTGAGGATGTTAGGTTTCTTTGA

Coding sequence (CDS)

ATGGCAAAAACCAACAAATACACCTCCATCAATTACAATCACATCTACGACAAGGATCTCTCCCCCAATTCCAAAACTGGCAACAATCCCTCCAAAAACCCATCTTCTTCTTCTTCTTCTTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCGCTAACAAGTCCCATGGCCGCATGCTCGTCCTGACCCGTCCCACTCCCAAACCCATCTCTTCGCTGCCGGTCCTGTCCCCTCAGCCTCAATCTCGATCCCCATCTGCCGATCCTCGTCCTGTTGCGGATCAGACCCATCCGCAATGCGAATCCGATTCCATCTCTCTTCGCCCTCTCGGTCGGACAGGTACGGGCGCGATCGCTCCGTCTCCGATTCCGAACTTGGAGAAGGACAAGGAGATTCCTCCTCCGACTGTTACGTTGCATAAACCGGAGAAATTTGTGCCGCCTCACCTCAGGGCGGGCTTCGTCGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTATGGGAATTACGGGTCTCCGGGTCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGCAAATGAGAGAATGAACGGGGCGGGAGAGGCAGATCAGGGGGAGATGGTGAATCGACCAAGATCCAGTGGCAATCGCCCGAATTCTAGTGGATGGCTCTGTGGAGATGAATCAATCCATTTCATGGCTCCTTTTTTGGTGCTTCAAGGGATTCATTCTGAAGTTGGATACTTTTCCAAGGATGAAGATGGATCACGTCGTCGAAGTTTTTACTTTTTAGAATTGTTTGCCATGGAAGATAAACGGACACCACACCAAGGAAACTATGTTTCTTTGGCTTCTTCACCCTTCTTCTGCATTCCTGGAGAGGGATGGAAGCTCGTTTGGAATGTAGAACTGACCGGTGTTATGTATTGTCGTCATTTTCGTCGTCGTAGTTGTTTAACTGCTTTTAGATCAGGGTTAGCATCTTGTGTGGAGGATGCTGCTGTGTTTTTCATTTTTCATCTCACAGTTTGTAAAACAAAGTTTCTTCTGGTGTGTGAGGATGTTAGGTTTCTTTGA

Protein sequence

MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGWLCGDESIHFMAPFLVLQGIHSEVGYFSKDEDGSRRRSFYFLELFAMEDKRTPHQGNYVSLASSPFFCIPGEGWKLVWNVELTGVMYCRHFRRRSCLTAFRSGLASCVEDAAVFFIFHLTVCKTKFLLVCEDVRFL

Homology

[Close]

BLAST of CmaCh19G008960 vs. ExPASy TrEMBL
Match: A0A6J1I0F0 (uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468300 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 4.7e-120
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60
           MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
           AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180

Query: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGW 232
           GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGW
Sbjct: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGW 231

[Close]

BLAST of CmaCh19G008960 vs. ExPASy TrEMBL
Match: A0A6J1HX94 (uncharacterized protein LOC111468300 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468300 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 8.9e-119
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60
           MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
           AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180

Query: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 231
           GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG
Sbjct: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 230

[Close]

BLAST of CmaCh19G008960 vs. ExPASy TrEMBL
Match: A0A6J1GJZ3 (uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 3.3e-113
Identity = 224/230 (97.39%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60
           MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP SSSSSSSSSFASATYSSISSANKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP-SSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPISS PVLSPQPQSRSPSADPRPVADQT PQCESDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
           AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQY 180

Query: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 231
           GNYGSPGRYGEDGRPKSGGA ERMNGAGEADQG MVNRPRSSGNRPNSSG
Sbjct: 181 GNYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of CmaCh19G008960 vs. ExPASy TrEMBL
Match: A0A6J1GK55 (uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455051 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 3.3e-113
Identity = 224/230 (97.39%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60
           MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP SSSSSSSSSFASATYSSISSANKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP-SSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPISS PVLSPQPQSRSPSADPRPVADQT PQCESDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
           AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQY 180

Query: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 231
           GNYGSPGRYGEDGRPKSGGA ERMNGAGEADQG MVNRPRSSGNRPNSSG
Sbjct: 181 GNYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of CmaCh19G008960 vs. ExPASy TrEMBL
Match: A0A0A0K3D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 194/241 (80.50%), Postives = 206/241 (85.48%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60
           MAKTNKYTSIN+NHIYDK+LS NSKTGNNPS N  + SSSSSSSFA+ATYSSISS NKSH
Sbjct: 1   MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSSN-KNPSSSSSSSFATATYSSISSPNKSH 60

Query: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120
           GRMLVLTRPTP+PI+S   LSPQPQSR  SAD RPV D   PQ +SDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPRPITSPQPLSPQPQSRPSSADHRPVPDHPRPQSDSDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
           AIAPSPIP LEKD+EI PP VTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQY
Sbjct: 121 AIAPSPIPVLEKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQY 180

Query: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGWLCGDESIHF 240
           GNYGS GRYGEDGRPKSGG  ERM   GEAD G MVNRPRSSGNRP+SSGW    + + F
Sbjct: 181 GNYGSSGRYGEDGRPKSGGGYERMKEVGEADLGAMVNRPRSSGNRPSSSGWYVSVKYLLF 240

Query: 241 M 242
           +
Sbjct: 241 L 240

[Close]

BLAST of CmaCh19G008960 vs. NCBI nr
Match: XP_022969243.1 (uncharacterized protein LOC111468300 isoform X2 [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 9.8e-120
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60
           MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
           AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180

Query: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGW 232
           GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGW
Sbjct: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGW 231

[Close]

BLAST of CmaCh19G008960 vs. NCBI nr
Match: XP_022969241.1 (uncharacterized protein LOC111468300 isoform X1 [Cucurbita maxima])

HSP 1 Score: 436.8 bits (1122), Expect = 1.8e-118
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60
           MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
           AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180

Query: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 231
           GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG
Sbjct: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 230

[Close]

BLAST of CmaCh19G008960 vs. NCBI nr
Match: KAG7011894.1 (hypothetical protein SDJN02_26801, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 420.2 bits (1079), Expect = 1.8e-113
Identity = 226/233 (97.00%), Postives = 227/233 (97.42%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP-SSSSSSSSSSFASATYSSISSANKS 60
           MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP SSSSSSSSSSFASATYSSISSANKS
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKS 60

Query: 61  HGRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGT 120
           HGRMLVLTRPTPKPISS PVLSPQPQSRSPSADPRPVADQT PQCESDSISLRPLGRTGT
Sbjct: 61  HGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGT 120

Query: 121 GAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQ 180
           GAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQ
Sbjct: 121 GAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQ 180

Query: 181 YGNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSGWL 233
           YGNYGSPGRYGEDGRPKSGGA ERMNGAGEADQG MVNRPRSSGNRPNSSG L
Sbjct: 181 YGNYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSGCL 233

[Close]

BLAST of CmaCh19G008960 vs. NCBI nr
Match: XP_022952341.1 (uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata] >KAG6572266.1 hypothetical protein SDJN03_28994, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 418.3 bits (1074), Expect = 6.8e-113
Identity = 224/230 (97.39%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60
           MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP SSSSSSSSSFASATYSSISSANKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP-SSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPISS PVLSPQPQSRSPSADPRPVADQT PQCESDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
           AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQY 180

Query: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 231
           GNYGSPGRYGEDGRPKSGGA ERMNGAGEADQG MVNRPRSSGNRPNSSG
Sbjct: 181 GNYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of CmaCh19G008960 vs. NCBI nr
Match: XP_022952342.1 (uncharacterized protein LOC111455051 isoform X2 [Cucurbita moschata])

HSP 1 Score: 418.3 bits (1074), Expect = 6.8e-113
Identity = 224/230 (97.39%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSH 60
           MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP SSSSSSSSSFASATYSSISSANKSH
Sbjct: 1   MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP-SSSSSSSSSFASATYSSISSANKSH 60

Query: 61  GRMLVLTRPTPKPISSLPVLSPQPQSRSPSADPRPVADQTHPQCESDSISLRPLGRTGTG 120
           GRMLVLTRPTPKPISS PVLSPQPQSRSPSADPRPVADQT PQCESDSISLRPLGRTGTG
Sbjct: 61  GRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSISLRPLGRTGTG 120

Query: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQY 180
           AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQY
Sbjct: 121 AIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQY 180

Query: 181 GNYGSPGRYGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 231
           GNYGSPGRYGEDGRPKSGGA ERMNGAGEADQG MVNRPRSSGNRPNSSG
Sbjct: 181 GNYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG 229

[Close]

BLAST of CmaCh19G008960 vs. TAIR 10
Match: AT3G54680.1 (proteophosphoglycan-related )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 98/239 (41.00%), Postives = 128/239 (53.56%), Query Frame = 0


Query: 5   NKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSFASATYSSISSANKSHGRML 64
           NKYTSIN+NHI  KD              PSSSSSSSS+S+        SS  +S+GRML
Sbjct: 7   NKYTSINFNHILHKD-------------PPSSSSSSSSASY--------SSVARSNGRML 66

Query: 65  VLTRPTPKPISSLPVLSPQPQSRSP--SADPRPVADQTHPQCESDSISLRPLGRTGTGAI 124
           VLT+ +PKP+ S P  +P   + +P  S  PR  ++Q     +   ISLRPLG TG+ + 
Sbjct: 67  VLTKSSPKPLRS-PSAAPTTTTTAPPISTAPRIPSNQAISDPDPSQISLRPLGHTGSSSS 126

Query: 125 APSPI--PNLEKDKEI--PPPTVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREAN-- 184
              PI  P + K  E+  P P     KP++FVPPHLR GFV K+E+P     R R+ N  
Sbjct: 127 LSFPIRTPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPGFVRKDEKPGLNSSRVRDPNPN 186

Query: 185 -QRQYGNYGSPGR----YGEDGRPKSGGANERMNGAGEADQGEMVNRPRSSGNRPNSSG 231
             ++  N   P +    YG+ GRPKSGG  ER+              PR +GNRP +SG
Sbjct: 187 LNQRLPNQEQPRQEYFGYGQPGRPKSGG-YERIR-----------TDPRITGNRPGTSG 211

The following BLAST results are available for this feature:

BLAST of CmaCh19G008960 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh19G008960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0F0	4.7e-120	100.00	uncharacterized protein LOC111468300 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HX94	8.9e-119	100.00	uncharacterized protein LOC111468300 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GJZ3	3.3e-113	97.39	uncharacterized protein LOC111455051 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GK55	3.3e-113	97.39	uncharacterized protein LOC111455051 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0K3D7	1.3e-93	80.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G039270 PE=4 SV=1	[more]

BLAST of CmaCh19G008960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969243.1	9.8e-120	100.00	uncharacterized protein LOC111468300 isoform X2 [Cucurbita maxima]	[more]
XP_022969241.1	1.8e-118	100.00	uncharacterized protein LOC111468300 isoform X1 [Cucurbita maxima]	[more]
KAG7011894.1	1.8e-113	97.00	hypothetical protein SDJN02_26801, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022952341.1	6.8e-113	97.39	uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata] >KAG6572266...	[more]
XP_022952342.1	6.8e-113	97.39	uncharacterized protein LOC111455051 isoform X2 [Cucurbita moschata]	[more]

BLAST of CmaCh19G008960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54680.1	1.1e-23	41.00	proteophosphoglycan-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G008960.1	CmaCh19G008960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006413	translational initiation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003743	translation initiation factor activity