CmaCh19G008850 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGATGCAAATCTTACTCATCCCATCTTCAAAATTTAGTCTCATCCTAAACACAAAAATGAGTTCCAAAGCCTTTATTTTTCTAGGTCTTCTTTTCGCCTTCATTCTCCTTATCTCTTCAGAGGTGGCCGCCAGAGACCTTGCCGAGACCTCCGCAAATAAGGAGAAGGGTTAGTTCGTAAAATATTTATTTATTCCATTTAAATCGGAGTGTTGTAACGTTAGTTTGTTTTAATGATGATATTGTAGAAGCCACGGTGGAGACCAATGGCGTAGAGGATGCCAAGTACGGAGGATATGATGGAGGTTATGGCGGGCGTGGTGGGTACGGTGGTCGTGGTGGGTATGGTGGTCGTGGTGGGTATGGTGGTCGAGGTGGGTATGGTGGTCGAGGTGGGTACGGTGGTCGTGGTGGCTACGGAAGGGGTTGCCGGTATGGACGATGCGGGTACAGGTGCTGCAGCTACGCCGGTGAGGTGGTGGAGGGCGCAAAGCCGTAAGACGACGTGGGGATGGGGTGAAAAATAATGAAATAGTTTAAAAGTTAATGTGTGAAGTGTGAAGTTTGTGAAATAAATGCATGGGGAATGGAGTGGCTGCTAGTTTTTCCTTTTTCCCTGTGTTTGGGTTTTAGTTTGTTGCTACAAGATTTGCTTTCTGCAAATTTTTGCATATCCACTTTGTATAATCCTACTACTATTTCCATGACTCCAGCTCCAGCTCGAGTACTCCTTCATTCATTCATCTCTATCTCGACTTGAAAACTCGCAAGCCATGCATTATCTAAAGGTTAGCAGCCTTGTAAGTACCGCTATTCATAAAATCTGATGAACTCGAAAATATTTTATGGATTGGATTGGGTTGGGTAGTACATTTTTTAATGTAAATTTTTTAACTCAAACGATGAATCATGATTTGGGTAATCTATTATTAATTTTTGGGAATAATCATGTGAAATTTTGGC CAAAGATGCAAATCTTACTCATCCCATCTTCAAAATTTAGTCTCATCCTAAACACAAAAATGAGTTCCAAAGCCTTTATTTTTCTAGGTCTTCTTTTCGCCTTCATTCTCCTTATCTCTTCAGAGGTGGCCGCCAGAGACCTTGCCGAGACCTCCGCAAATAAGGAGAAGGAAGCCACGGTGGAGACCAATGGCGTAGAGGATGCCAAGTACGGAGGATATGATGGAGGTTATGGCGGGCGTGGTGGGTACGGTGGTCGTGGTGGGTATGGTGGTCGTGGTGGGTATGGTGGTCGAGGTGGGTATGGTGGTCGAGGTGGGTACGGTGGTCGTGGTGGCTACGGAAGGGGTTGCCGGTATGGACGATGCGGGTACAGGTGCTGCAGCTACGCCGGTGAGGTGGTGGAGGGCGCAAAGCCGTAAGACGACGTGGGGATGGGGTGAAAAATAATGAAATAGTTTAAAAGTTAATGTGTGAAGTGTGAAGTTTGTGAAATAAATGCATGGGGAATGGAGTGGCTGCTAGTTTTTCCTTTTTCCCTGTGTTTGGGTTTTAGTTTGTTGCTACAAGATTTGCTTTCTGCAAATTTTTGCATATCCACTTTGTATAATCCTACTACTATTTCCATGACTCCAGCTCCAGCTCGAGTACTCCTTCATTCATTCATCTCTATCTCGACTTGAAAACTCGCAAGCCATGCATTATCTAAAGGTTAGCAGCCTTGTAAGTACCGCTATTCATAAAATCTGATGAACTCGAAAATATTTTATGGATTGGATTGGGTTGGGTAGTACATTTTTTAATGTAAATTTTTTAACTCAAACGATGAATCATGATTTGGGTAATCTATTATTAATTTTTGGGAATAATCATGTGAAATTTTGGC ATGCAAATCTTACTCATCCCATCTTCAAAATTTAGTCTCATCCTAAACACAAAAATGAGTTCCAAAGCCTTTATTTTTCTAGGTCTTCTTTTCGCCTTCATTCTCCTTATCTCTTCAGAGGTGGCCGCCAGAGACCTTGCCGAGACCTCCGCAAATAAGGAGAAGGAAGCCACGGTGGAGACCAATGGCGTAGAGGATGCCAAGTACGGAGGATATGATGGAGGTTATGGCGGGCGTGGTGGGTACGGTGGTCGTGGTGGGTATGGTGGTCGTGGTGGGTATGGTGGTCGAGGTGGGTATGGTGGTCGAGGTGGGTACGGTGGTCGTGGTGGCTACGGAAGGGGTTGCCGGTATGGACGATGCGGGTACAGGTGCTGCAGCTACGCCGGTGAGGTGGTGGAGGGCGCAAAGCCGTAA MQILLIPSSKFSLILNTKMSSKAFIFLGLLFAFILLISSEVAARDLAETSANKEKEATVETNGVEDAKYGGYDGGYGGRGGYGGRGGYGGRGGYGGRGGYGGRGGYGGRGGYGRGCRYGRCGYRCCSYAGEVVEGAKP Homology
BLAST of CmaCh19G008850 vs. ExPASy Swiss-Prot
Match: P23137 (Glycine-rich protein OS=Nicotiana tabacum OX=4097 GN=GRP PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05 Identity = 60/122 (49.18%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of CmaCh19G008850 vs. ExPASy TrEMBL
Match: A0A6J1HZJ5 (glycine-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111468344 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.5e-60 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of CmaCh19G008850 vs. ExPASy TrEMBL
Match: A0A6J1GM55 (cold and drought-regulated protein CORA-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455223 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.9e-54 Identity = 129/138 (93.48%), Postives = 130/138 (94.20%), Query Frame = 0
BLAST of CmaCh19G008850 vs. ExPASy TrEMBL
Match: A0A6J1GKL6 (glycine-rich protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455223 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 6.9e-48 Identity = 118/138 (85.51%), Postives = 119/138 (86.23%), Query Frame = 0
BLAST of CmaCh19G008850 vs. ExPASy TrEMBL
Match: A0A5D3DE59 (Cold and drought-regulated protein CORA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00050 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 9.4e-37 Identity = 106/122 (86.89%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of CmaCh19G008850 vs. ExPASy TrEMBL
Match: A0A0A0K6L7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037600 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36 Identity = 109/144 (75.69%), Postives = 118/144 (81.94%), Query Frame = 0
BLAST of CmaCh19G008850 vs. NCBI nr
Match: XP_022969295.1 (glycine-rich protein-like [Cucurbita maxima]) HSP 1 Score: 240.7 bits (613), Expect = 7.3e-60 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of CmaCh19G008850 vs. NCBI nr
Match: XP_023554637.1 (cold and drought-regulated protein CORA-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 227.3 bits (578), Expect = 8.3e-56 Identity = 131/138 (94.93%), Postives = 132/138 (95.65%), Query Frame = 0
BLAST of CmaCh19G008850 vs. NCBI nr
Match: XP_022952570.1 (cold and drought-regulated protein CORA-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 221.1 bits (562), Expect = 6.0e-54 Identity = 129/138 (93.48%), Postives = 130/138 (94.20%), Query Frame = 0
BLAST of CmaCh19G008850 vs. NCBI nr
Match: XP_022952571.1 (glycine-rich protein-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47 Identity = 118/138 (85.51%), Postives = 119/138 (86.23%), Query Frame = 0
BLAST of CmaCh19G008850 vs. NCBI nr
Match: XP_023554636.1 (cold and drought-regulated protein CORA-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 198.4 bits (503), Expect = 4.2e-47 Identity = 114/120 (95.00%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of CmaCh19G008850 vs. TAIR 10
Match: AT2G05540.1 (Glycine-rich protein family ) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08 Identity = 70/131 (53.44%), Postives = 83/131 (63.36%), Query Frame = 0
BLAST of CmaCh19G008850 vs. TAIR 10
Match: AT2G05530.1 (Glycine-rich protein family ) HSP 1 Score: 49.7 bits (117), Expect = 2.2e-06 Identity = 60/124 (48.39%), Postives = 72/124 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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