CmaCh19G008270 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G008270
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cma_Chr19: 7863712 .. 7864806 (+)
RNA-Seq Expression	CmaCh19G008270
Synteny	CmaCh19G008270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCGTTGCAGATGCAATTACAATCTCGTCTTCGAGTTTCGAAGATTTTGTTTTCAACAATTCGGAATTGGGAAAGAGGCTTTCCTCTGCTCCATGATCCATTGCGAACGCCGGATTTATCACTCTCGCCGGTGGAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGAACTTCTCAAGGTCCGAGCCGAGAAGCAGCCCGCCGCAACGACGTTCTCCGCCGGATCCTCGCGAAGCTCGTCGAGTTCCCAAATTCGCCGGGGAAGTATCTGCTCCTTATCCTGAGGATAATCGGAATCAACGGTTTAATAGGCATTGGGAAGGTTCCGAGTCCCGATTCGCAAACGAAGGGCCGATGTCGCGGCGAAGGAGTGAGTCTTTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACCGACAATCTGAGTACTAGTACAGAGAAAACCGAGCCGAGCTCTTCTGCTCAGTTTTCTGAATCAATGCAGGGGAAGCAATCGCAACCACAGTGTCCTCCAGAGGCGGATGAGATATTCAGGAAAATGAAGGAAACTGGTCTAATTCCCAACGCTGTTGCTATGCTTGATGGGCTTTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTATTTGGTTTGATTCGTGAGAAGGGTACAATTCCAGAAGTTGTGGTTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCCGAGAATCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGGCATTTCTCCCAATGCATTCAGTTACGGCGTCTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGATGCCGTATCATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATCTAACCACTTTTGTCGGCCTAATTGATGAGTTATGCAAAGAAAAGGGGGTGGACGAAGCTCATACTGTCATAGAAACCTTAAAACAAAAGGGATTCTTGATTAATGAGAAAGCTTTAAGAGAATTCTTGAATAAAAGAGCCCCATTTTCACCTCATATCTGGGAACTAATCTTCGGGAAGAAAACGAAGGAATTTTTCTGA

mRNA sequence

ATGGGAGCGTTGCAGATGCAATTACAATCTCGTCTTCGAGTTTCGAAGATTTTGTTTTCAACAATTCGGAATTGGGAAAGAGGCTTTCCTCTGCTCCATGATCCATTGCGAACGCCGGATTTATCACTCTCGCCGGTGGAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGAACTTCTCAAGGTCCGAGCCGAGAAGCAGCCCGCCGCAACGACGTTCTCCGCCGGATCCTCGCGAAGCTCGTCGAGTTCCCAAATTCGCCGGGGAAGTATCTGCTCCTTATCCTGAGGATAATCGGAATCAACGGTTTAATAGGCATTGGGAAGGTTCCGAGTCCCGATTCGCAAACGAAGGGCCGATGTCGCGGCGAAGGAGTGAGTCTTTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACCGACAATCTGAGTACTAGTACAGAGAAAACCGAGCCGAGCTCTTCTGCTCAGTTTTCTGAATCAATGCAGGGGAAGCAATCGCAACCACAGTGTCCTCCAGAGGCGGATGAGATATTCAGGAAAATGAAGGAAACTGGTCTAATTCCCAACGCTGTTGCTATGCTTGATGGGCTTTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTATTTGGTTTGATTCGTGAGAAGGGTACAATTCCAGAAGTTGTGGTTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCCGAGAATCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGGCATTTCTCCCAATGCATTCAGTTACGGCGTCTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGATGCCGTATCATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATCTAACCACTTTTGTCGGCCTAATTGATGAGTTATGCAAAGAAAAGGGGGTGGACGAAGCTCATACTGTCATAGAAACCTTAAAACAAAAGGGATTCTTGATTAATGAGAAAGCTTTAAGAGAATTCTTGAATAAAAGAGCCCCATTTTCACCTCATATCTGGGAACTAATCTTCGGGAAGAAAACGAAGGAATTTTTCTGA

Coding sequence (CDS)

ATGGGAGCGTTGCAGATGCAATTACAATCTCGTCTTCGAGTTTCGAAGATTTTGTTTTCAACAATTCGGAATTGGGAAAGAGGCTTTCCTCTGCTCCATGATCCATTGCGAACGCCGGATTTATCACTCTCGCCGGTGGAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGAACTTCTCAAGGTCCGAGCCGAGAAGCAGCCCGCCGCAACGACGTTCTCCGCCGGATCCTCGCGAAGCTCGTCGAGTTCCCAAATTCGCCGGGGAAGTATCTGCTCCTTATCCTGAGGATAATCGGAATCAACGGTTTAATAGGCATTGGGAAGGTTCCGAGTCCCGATTCGCAAACGAAGGGCCGATGTCGCGGCGAAGGAGTGAGTCTTTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACCGACAATCTGAGTACTAGTACAGAGAAAACCGAGCCGAGCTCTTCTGCTCAGTTTTCTGAATCAATGCAGGGGAAGCAATCGCAACCACAGTGTCCTCCAGAGGCGGATGAGATATTCAGGAAAATGAAGGAAACTGGTCTAATTCCCAACGCTGTTGCTATGCTTGATGGGCTTTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTATTTGGTTTGATTCGTGAGAAGGGTACAATTCCAGAAGTTGTGGTTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCCGAGAATCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGGCATTTCTCCCAATGCATTCAGTTACGGCGTCTTGATACAGGGACTGTACAAATGCAAAAAATTAGAGGATGCCGTATCATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATCTAACCACTTTTGTCGGCCTAATTGATGAGTTATGCAAAGAAAAGGGGGTGGACGAAGCTCATACTGTCATAGAAACCTTAAAACAAAAGGGATTCTTGATTAATGAGAAAGCTTTAAGAGAATTCTTGAATAAAAGAGCCCCATTTTCACCTCATATCTGGGAACTAATCTTCGGGAAGAAAACGAAGGAATTTTTCTGA

Protein sequence

MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANEGPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKTKEFF

Homology

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BLAST of CmaCh19G008270 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.7e-77
Identity = 152/261 (58.24%), Postives = 188/261 (72.03%), Query Frame = 0


Query: 107 NRHWEGSESRFANEGPMSRRR----SESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSA 166
           NR   G  S  ++  P +R+         +  D  FLE+FKL  +  S  T K E     
Sbjct: 51  NRPLRGERSSNSHREPPARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRETPKPE----- 110

Query: 167 QFSESMQGKQSQPQCPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIR 226
           Q+ +       +P  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R
Sbjct: 111 QYPQ-------EPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMR 170

Query: 227 EKGTIPEVVVYTAVVDGFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLE 286
           +KGTIPEVV+YTAVV+ FCKA  +++A RIFRKMQNNGI+PNAFSYGVL+QGLY C  L+
Sbjct: 171 DKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLD 230

Query: 287 DAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFL 346
           DAV+FC EMLESGHSPN+ TFV L+D LC+ KGV++A + I+TL QKGF +N KA++EF+
Sbjct: 231 DAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 290

Query: 347 NKRAPFSPHIWELIFGKKTKE 363
           +KRAPF    WE IF KK  E
Sbjct: 291 DKRAPFPSLAWEAIFKKKPTE 299

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BLAST of CmaCh19G008270 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.7e-23
Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 183 EIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGF 242
           +IF +M + G  P++     ++ GLC+ G I EA KLF  + EK   P VV YT++++G 
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237

Query: 243 CKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNL 302
           C ++N+DEA+R   +M++ GI PN F+Y  L+ GL K  +   A+     M+  G  PN+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297

Query: 303 TTFVGLIDELCKEKGVDEAHTVIETLKQKG 330
            T+  LI  LCKE+ + EA  +++ +  +G
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQG 327

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BLAST of CmaCh19G008270 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 8.8e-23
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 180 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVV 239
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 240 DGFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHS 299
            GFC+  ++ EA ++F +M   G+ P++ ++  LI G  K   ++DA      M+++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 300 PNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN 334
           PN+ T+  LID LCKE  +D A+ ++  + + G   N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490

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BLAST of CmaCh19G008270 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.0e-22
Identity = 55/152 (36.18%), Postives = 84/152 (55.26%), Query Frame = 0


Query: 181 ADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVD 240
           A E+ RKM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 241 GFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSP 300
           GFC A   D+  ++ R M    ISPN  ++ VLI    K  KL +A     EM++ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 301 NLTTFVGLIDELCKEKGVDEAHTVIETLKQKG 330
           N  T+  LID  CKE  ++EA  +++ +  KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

[Close]

BLAST of CmaCh19G008270 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.4e-22
Identity = 46/151 (30.46%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 180 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVV 239
           EA E++ +M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ ++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392

Query: 240 DGFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHS 299
           + +CKA+ +D+ +R+FR++ + G+ PN  +Y  L+ G  +  KL  A     EM+  G  
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452

Query: 300 PNLTTFVGLIDELCKEKGVDEAHTVIETLKQ 328
           P++ T+  L+D LC    +++A  + E +++
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQK 483

[Close]

BLAST of CmaCh19G008270 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1)

HSP 1 Score: 725.3 bits (1871), Expect = 1.2e-205
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60
           MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120
           NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180
           GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240
           ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300
           KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT
Sbjct: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360
           TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of CmaCh19G008270 vs. ExPASy TrEMBL
Match: A0A6J1GKZ0 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111455321 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 2.0e-195
Identity = 349/364 (95.88%), Postives = 354/364 (97.25%), Query Frame = 0


Query: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60
           MGALQMQLQSRLRVSKIL STIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120
           NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRH EGS SRFAN+
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180
           GPMSR R+ESLSQKDFSFLEKFKLNTDN STSTEK EPSSSAQ SESMQGKQSQPQCPPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPE 180

Query: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240
           ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300
           KAE LDEAIRIFRKMQNNGISPNAFSYG+LIQGLYK K+LEDAVSFCIEMLESGHSPNLT
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360
           TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK LR+FLNKRAPFSPHIWELIFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of CmaCh19G008270 vs. ExPASy TrEMBL
Match: A0A6J1C2J3 (pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=3673 GN=LOC111007869 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 6.1e-160
Identity = 292/364 (80.22%), Postives = 320/364 (87.91%), Query Frame = 0


Query: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60
           M ALQ+QLQSRLR+SKI+ S+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW
Sbjct: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60

Query: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120
             S SEPRS+PP RRSPPD RE RRVPKF+  VSA YP D+RN+R N+  EGS  RF NE
Sbjct: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120

Query: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180
           G +SR+RSE LSQKDFSFLEKFKLNTDN S+S EKTE SS+ +FSES+Q KQSQPQ PPE
Sbjct: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180

Query: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFC
Sbjct: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240

Query: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300
           KAE LDEAIRIFRKMQ NGISPNAFS+GVLIQGLYKC KLE+A+ FCIEMLESGHSPN+T
Sbjct: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300

Query: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360
           T VGL+DELCKE+G +EA +VIETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKT
Sbjct: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of CmaCh19G008270 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.3e-149
Identity = 288/360 (80.00%), Postives = 306/360 (85.00%), Query Frame = 0


Query: 7   QLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSE 66
           Q QSRL+VSKIL S+IR WE  FPLLH+PLRTPD SLSP  SR FSSNSMDDD  FS SE
Sbjct: 5   QFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESE 64

Query: 67  PRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANEGPMSRR 126
           PR++PPQRR PPD REARRVP+  G V+  Y  DNRNQRFNRH EGS SRF NEG  SR+
Sbjct: 65  PRNTPPQRRFPPDHREARRVPR--GGVTDSY--DNRNQRFNRHSEGSSSRFTNEGSTSRQ 124

Query: 127 RSESLSQKDFSFLEKFKLNTDNLSTSTEKTEP-SSSAQFSESMQGK-QSQPQCPPEADEI 186
           RSESLSQKDFSFLEKFKLNTDN S+  EKTE  SSSA  SESMQ K QSQ Q PP ADEI
Sbjct: 125 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 184

Query: 187 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEN 246
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVV+YTAVVDGFCKAE 
Sbjct: 185 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 247 LDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLTTFVG 306
            DEAIRIFRKMQN GISPNAFS+GVLIQGLYKCKKL+DAV+FC EMLESGH PNLTTFVG
Sbjct: 245 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 304

Query: 307 LIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKTKEFF 365
           LID LC EKGVDEAH V+ET KQKGFLI+EKALREFLNKRAPFSP IW++ FG K   FF
Sbjct: 305 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]

BLAST of CmaCh19G008270 vs. ExPASy TrEMBL
Match: A0A5D3D5J5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00030 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.3e-149
Identity = 288/360 (80.00%), Postives = 306/360 (85.00%), Query Frame = 0


Query: 7   QLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSE 66
           Q QSRL+VSKIL S+IR WE  FPLLH+PLRTPD SLSP  SR FSSNSMDDD  FS SE
Sbjct: 5   QFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESE 64

Query: 67  PRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANEGPMSRR 126
           PR++PPQRR PPD REARRVP+  G V+  Y  DNRNQRFNRH EGS SRF NEG  SR+
Sbjct: 65  PRNTPPQRRFPPDHREARRVPR--GGVTDSY--DNRNQRFNRHSEGSSSRFTNEGSTSRQ 124

Query: 127 RSESLSQKDFSFLEKFKLNTDNLSTSTEKTEP-SSSAQFSESMQGK-QSQPQCPPEADEI 186
           RSESLSQKDFSFLEKFKLNTDN S+  EKTE  SSSA  SESMQ K QSQ Q PP ADEI
Sbjct: 125 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 184

Query: 187 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEN 246
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVV+YTAVVDGFCKAE 
Sbjct: 185 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 247 LDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLTTFVG 306
            DEAIRIFRKMQN GISPNAFS+GVLIQGLYKCKKL+DAV+FC EMLESGH PNLTTFVG
Sbjct: 245 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 304

Query: 307 LIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKTKEFF 365
           LID LC EKGVDEAH V+ET KQKGFLI+EKALREFLNKRAPFSP IW++ FG K   FF
Sbjct: 305 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]

BLAST of CmaCh19G008270 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 725.3 bits (1871), Expect = 2.6e-205
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60
           MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120
           NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180
           GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240
           ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300
           KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT
Sbjct: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360
           TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of CmaCh19G008270 vs. NCBI nr
Match: XP_023554525.1 (pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554526.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 694.5 bits (1791), Expect = 4.9e-196
Identity = 351/364 (96.43%), Postives = 355/364 (97.53%), Query Frame = 0


Query: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60
           MGALQMQLQSRLRVSKIL STIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120
           NFSRSEPRSSPPQRRSPPDPREARRVPKFAGE SAPYPEDNRNQRFNRH EGS SRFANE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEGSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180
           GPMSRRR+ESLSQKDFSFLEKFKLNTDN STSTEK EPSSSAQFSESMQG+QSQPQCPPE
Sbjct: 121 GPMSRRRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGEQSQPQCPPE 180

Query: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240
           ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300
           KAE LDEAIRIFRKMQNNGISPNAFSYG+LIQGLYK K+LEDAVSFCIEMLESGHSPNLT
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360
           TFVGLIDELCKEKG DEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT
Sbjct: 301 TFVGLIDELCKEKGEDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of CmaCh19G008270 vs. NCBI nr
Match: KAG7011839.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 691.8 bits (1784), Expect = 3.2e-195
Identity = 349/364 (95.88%), Postives = 353/364 (96.98%), Query Frame = 0


Query: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60
           MGALQMQLQSRLRVSKIL STIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120
           NFS+SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRH EGS SRFANE
Sbjct: 61  NFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180
           GPMSR R+ESLSQKDFSFLEKFKLNTDN STSTEK EPSSSAQFSESMQGKQSQPQCPPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240
           ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300
           KAE  DEAIRIFRKMQNNGISPNAFSYG+LIQGLYK K+LEDAVSFC EMLESGHSPNLT
Sbjct: 241 KAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360
           TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK LREFLNKRAPFSPHIWELIFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of CmaCh19G008270 vs. NCBI nr
Match: XP_022952706.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] >XP_022952707.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata])

HSP 1 Score: 691.4 bits (1783), Expect = 4.1e-195
Identity = 349/364 (95.88%), Postives = 354/364 (97.25%), Query Frame = 0


Query: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60
           MGALQMQLQSRLRVSKIL STIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120
           NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRH EGS SRFAN+
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180
           GPMSR R+ESLSQKDFSFLEKFKLNTDN STSTEK EPSSSAQ SESMQGKQSQPQCPPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPE 180

Query: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240
           ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300
           KAE LDEAIRIFRKMQNNGISPNAFSYG+LIQGLYK K+LEDAVSFCIEMLESGHSPNLT
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360
           TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK LR+FLNKRAPFSPHIWELIFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of CmaCh19G008270 vs. NCBI nr
Match: KAG6572199.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 609.4 bits (1570), Expect = 2.1e-170
Identity = 309/320 (96.56%), Postives = 312/320 (97.50%), Query Frame = 0


Query: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60
           MGALQMQLQSRLRVSKIL STIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120
           NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRH EGS SRFANE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180
           GPMSR R+ESLSQKDFSFLEKFKLNTDN STSTEK EPSSSAQFSESMQGKQSQPQCPPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240
           ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300
           KAE LDEAIRIFRKMQNNGISPNAFSYG+LIQGLYK K+LEDAVSFCIEMLESGHSPNLT
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKEKGVDEAHT 321
           TFVGLIDELCKEKGVDEAHT
Sbjct: 301 TFVGLIDELCKEKGVDEAHT 320

[Close]

BLAST of CmaCh19G008270 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 289.7 bits (740), Expect = 3.4e-78
Identity = 152/261 (58.24%), Postives = 188/261 (72.03%), Query Frame = 0


Query: 107 NRHWEGSESRFANEGPMSRRR----SESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSA 166
           NR   G  S  ++  P +R+         +  D  FLE+FKL  +  S  T K E     
Sbjct: 51  NRPLRGERSSNSHREPPARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRETPKPE----- 110

Query: 167 QFSESMQGKQSQPQCPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIR 226
           Q+ +       +P  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R
Sbjct: 111 QYPQ-------EPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMR 170

Query: 227 EKGTIPEVVVYTAVVDGFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLE 286
           +KGTIPEVV+YTAVV+ FCKA  +++A RIFRKMQNNGI+PNAFSYGVL+QGLY C  L+
Sbjct: 171 DKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLD 230

Query: 287 DAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFL 346
           DAV+FC EMLESGHSPN+ TFV L+D LC+ KGV++A + I+TL QKGF +N KA++EF+
Sbjct: 231 DAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 290

Query: 347 NKRAPFSPHIWELIFGKKTKE 363
           +KRAPF    WE IF KK  E
Sbjct: 291 DKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of CmaCh19G008270 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 289.7 bits (740), Expect = 3.4e-78
Identity = 152/261 (58.24%), Postives = 188/261 (72.03%), Query Frame = 0


Query: 107 NRHWEGSESRFANEGPMSRRR----SESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSA 166
           NR   G  S  ++  P +R+         +  D  FLE+FKL  +  S  T K E     
Sbjct: 51  NRPLRGERSSNSHREPPARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRETPKPE----- 110

Query: 167 QFSESMQGKQSQPQCPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIR 226
           Q+ +       +P  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R
Sbjct: 111 QYPQ-------EPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMR 170

Query: 227 EKGTIPEVVVYTAVVDGFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLE 286
           +KGTIPEVV+YTAVV+ FCKA  +++A RIFRKMQNNGI+PNAFSYGVL+QGLY C  L+
Sbjct: 171 DKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLD 230

Query: 287 DAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFL 346
           DAV+FC EMLESGHSPN+ TFV L+D LC+ KGV++A + I+TL QKGF +N KA++EF+
Sbjct: 231 DAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 290

Query: 347 NKRAPFSPHIWELIFGKKTKE 363
           +KRAPF    WE IF KK  E
Sbjct: 291 DKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of CmaCh19G008270 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-29
Identity = 101/334 (30.24%), Postives = 158/334 (47.31%), Query Frame = 0


Query: 40  DLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPY-- 99
           D++ S +    FS       +  S S   SSP    +    +E +   +F+  + A +  
Sbjct: 30  DITSSAINGGEFSDFVRAFAFYSSSSSWWSSPDDLTASSKRKEKKTTERFSAVIDAVHDR 89

Query: 100 ---PEDNRNQRFNRHWEGSESRFANEGPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTE 159
              PE    + F R    S S F         R  S   K  +    F L+ D+    TE
Sbjct: 90  KLPPELRGRRDFVRSKRNSNSLFPWFCGGVFARQFSSETKRVNTKVNFSLSDDDSDEETE 149

Query: 160 --------KTEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCK 219
                   K EP        S +    +P+ P    EIF KM+  G    AV M D L K
Sbjct: 150 TQVTEDSKKQEPPPPPYDPFSKKPAIEEPEDPKNLQEIFHKMRTEGFTNEAVKMFDALSK 209

Query: 220 DGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAENLDEAIRIFRKMQNNGISPNAFS 279
           DG   EA++LF  I++K  +P+VV +TA+V+ +  A    E +++F +M  +G+SPNA++
Sbjct: 210 DGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYT 269

Query: 280 YGVLIQGLYKCKKL-EDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETL 339
           Y VLI+GL    K  +DA  + +EM+ +G SPN  T+  + +   +E   + A  +++ +
Sbjct: 270 YSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEM 329

Query: 340 KQKGFLINEKALREFLN-KRAPFSPHIWELIFGK 359
           K KGF+ +EKA+RE L  KR      +  L+F K
Sbjct: 330 KGKGFVPDEKAVREALEYKRGQVFRTVINLLFDK 363

[Close]

BLAST of CmaCh19G008270 vs. TAIR 10
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 4.8e-24
Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 183 EIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGF 242
           +IF +M + G  P++     ++ GLC+ G I EA KLF  + EK   P VV YT++++G 
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237

Query: 243 CKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNL 302
           C ++N+DEA+R   +M++ GI PN F+Y  L+ GL K  +   A+     M+  G  PN+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297

Query: 303 TTFVGLIDELCKEKGVDEAHTVIETLKQKG 330
            T+  LI  LCKE+ + EA  +++ +  +G
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQG 327

[Close]

BLAST of CmaCh19G008270 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 6.2e-24
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 180 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVV 239
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 240 DGFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHS 299
            GFC+  ++ EA ++F +M   G+ P++ ++  LI G  K   ++DA      M+++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 300 PNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN 334
           PN+ T+  LID LCKE  +D A+ ++  + + G   N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490

The following BLAST results are available for this feature:

BLAST of CmaCh19G008270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL5	4.7e-77	58.24	Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX...	[more]
Q9FNL2	6.7e-23	36.67	Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	8.8e-23	34.39	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9LPX2	2.0e-22	36.18	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]
Q6NQ83	7.4e-22	30.46	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]

BLAST of CmaCh19G008270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1Q2	1.2e-205	100.00	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O...	[more]
A0A6J1GKZ0	2.0e-195	95.88	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata...	[more]
A0A6J1C2J3	6.1e-160	80.22	pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=...	[more]
A0A1S3CFW0	1.3e-149	80.00	pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3D5J5	1.3e-149	80.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmaCh19G008270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969144.1	2.6e-205	100.00	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X...	[more]
XP_023554525.1	4.9e-196	96.43	pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita...	[more]
KAG7011839.1	3.2e-195	95.88	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022952706.1	4.1e-195	95.88	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] ...	[more]
KAG6572199.1	2.1e-170	96.56	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of CmaCh19G008270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38150.1	3.4e-78	58.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G38150.2	3.4e-78	58.24	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G03560.2	1.3e-29	30.24	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G46100.1	4.8e-24	36.67	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G05670.1	6.2e-24	34.39	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 199..224 e-value: 5.8E-5 score: 23.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 265..298 e-value: 3.9E-5 score: 21.6 coord: 199..227 e-value: 7.8E-5 score: 20.6 coord: 230..264 e-value: 1.1E-10 score: 39.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 227..276 e-value: 1.4E-15 score: 57.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 263..297 score: 10.720209
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 228..262 score: 13.065928
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 193..227 score: 8.582755
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 298..332 score: 8.582755
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 167..243 e-value: 2.0E-14 score: 55.3 coord: 244..345 e-value: 3.8E-20 score: 74.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..131
None	No IPR available	PANTHER	PTHR45613:SF39	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 54..362
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 54..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G008270.1	CmaCh19G008270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding