CmaCh19G006910 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGAAGTGGTTTGTAAGTTACAGCGTTGTAGATTACATGTTGAGATAATCTAGAGGTCCGTGAATTGTGTTTGTTTTTAGTTGTTGTTGTTGTTGTTGAGCGTCTGTAAATGTTCTTGGTATAATTTCTCTCAACGAATATGAAATTTCTCTTTATGTGCCAACTTATCACGTCTGCAAAGATCTCGTGATTTGTGGCAGTTGTAGTTATTATTTGCGTTAGCGTTGCTTAGTAGTTCGTATGTTGGCTTTGCTTGTTTCTATTAGAAATTTTAACGGCTGCACAAATTGACTGTAGAACCTGTTCTGCAAAATTAGTAATTAGTTAAAGAGATGTTTCCAAAATGATCACTCGTGGTGGGATTACCAGTTGTAAACTGTGAAATTTTCAAAAATCATTGACACAAATGACTTACAAGTTGTAATAGTGAAAGAAGTTGATGCAGCAATATGGAATGTGAATGTTAGTGGGCGTTGTTTGTGGATGGTCCGCTACTGGATAAATTCTTAGCTTGGTGATGTGTTGGCAATGTTAACTTCAGCCATTCTTGAAATTGTATGAAGAATGTAGTTGAGGAATTGGATGTTGTGGTGGTGTTTGCTTTGTTGGAATTTTACTACTTTGTTGAATGGGATTGGAAATTGGTGTTTTCTATTTGAAGGGAAAAGAAAGAGTTTGGTTTGGATTCATGGATATGAATTTGGTGTGTGGTTGTTATATGGGCAGGGAGGAGGCAGCATCGGTGTGATATTTTGGTGGTGGTGGTGGTGGTATTTTCACGTATCAGTGGGAATAAGTATTGGAGAATAAGTTTGGATATGAGTTCAGATAGCAGGAGTCAAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCCCACTGGATCGTAAAATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATCTCGTCGGGGTTTCAGGTTTCTGATTCTGATAAATTATGTATTTATCTCATATCTTATATGTAGGATGGGGAAGAATTTGCAGTTGTGTTTTTTAAATCCATCTTTGGCTGTGGACCTACCTTCCCCGTCTTTTTTTTAGTACATTTCATTCATTCATCAATTCGTATCTCGTTTCTTCTCAATACATACACAGATACCTATCACACACATGGTCATGGAGTCTGTTTTTAAGGAATTATGTAGCCATTGCATTATTGGGGTTGCACACTTTGTGTTTGACGAACTCGACAAATCTCTGCATTTACCATGCTTGAGCAGACATGGGCTTCTCCTGCATTGCTGCGATCTGTATAATATCCATGTTATACTAATTGTATGGTAATAGTATTTGATGTTTATGTTTCTGACATTCGGACACGAACATATATTAGTATGAAAAGTTGCGGAGGGAGCTTATATTGTTGTGGTTGATCCTTTTAAATTTCTTCATTATGCTTCTTGATCATTTTCCCTTGCTTATCCGGAAAAAAAAAAAATTATTGAGATGTTAATCTTAATCTGATTTTATTGCCAGTCGAGATAATCTTTGCAAGAACTGCAAGCGGCCTGGCCATTTTGCAAGAGAATGCCAAGATGTCGCAATTTGTCACAATTGTAGTCTCCCTGGGTAAGGAAACTTGATCTTATGCTTATTATCTTCGTCGCCTATTCGGATACATATGCTTATTATCTTCGTTGCCTATTCGGATACAAATGTTTACTTGGGAGAATACTTATTTTTTTATGTACTTAAATATTCACCATTCTACTGGCTGCTATATTCCATTCTACTTGACATGAAAATTATGGATTTGGTTCCATTCTACTCCGGTGTCACTAATCTTAATTTAGAATTTGAGATTTGAAGTTGACTCGAGGATATATTGTACGATGCTATCAAGCAGGTTTTATGTGATTTAGGTCGGTGAGTAATTTTGAAATGGTTAAAATCACTTCAAAACATGGTTTTAATCATTCGAAATCAATTTTGCTGACACGAAAATCACATTCGAAGGATTAAAAACGTGTCTTTGAGTCTTAGAGTGATTTTAATCATTTCAATAGCACTCCTAAACATGGTCGAATCGGGTTATAATTGCATATTTGGTATACATTTGGTTGAACAATGACCCCCTTTTACTTATCACTTGATCTACTAGGCATATTGCTTCCGAGTGCACGACAAAGTCGCTATGTTGGAACTGTCGAGAACCCGGTCACATGGCAAGTAGCTGCCCCAATGAAGGCATTTGCCACACCTGTGGTAAGGCAGGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTCCCCACTGGCGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAATGAGAAGGCGTGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGTGAATGTCCAAATGACCCGATTTGCAACCTGTGTAATGTATCAGGGCATGTGGCCAGACAGTGTCCGAAGTCCAACGTCCTCGGAGACCGAGTAGACCGAGGCAGTGGCGGTGGCAGTGTGCGGGGTGGTGCTGGTGTTTACCGGGATGTTGTGTGTAGGACATGCCAGCAGCTTGGCCATATGAGTAGAGATTGCATGGGCCCTTTGATGATCTGCCATAACTGCGGGGGACGTGGTCACTTGGCATACGAATGCCCTTCTGGTCGGTTTATGGACCGTTATCCCCGGAGGTACTGATGATCAAAAGAGATAACACACGTTCTCGACAAGGTTAGACCTTCAGATTTTGCTTGGAGTTTAGATAATCTGAGAACTAAACTTTATAGATTGCTCTACTCGGTTGCATTGTAGTATTTGCCCGTGCTATTATTACGAAACATTGCTATGCGGTTTAGACAATGAATTTTCGGTCTCATTGATCTTGCTTCTATATAATATAAAGACTTCCTTTCATTGTTTGTTGATTTTCCTTGTAACGAAATTGCCTTGTTTGTAAACTATGAATTACCACTCTTGTTGAGATGTAACTGACCAAT ATGATGGAAGTGGTTTGGAGGAGGCAGCATCGGTGTGATATTTTGGTGGTGGTGGTGGTGGTATTTTCACGTATCAGTGGGAATAAGTATTGGAGAATAAGTTTGGATATGAGTTCAGATAGCAGGAGTCAAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCCCACTGGATCGTAAAATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATCTCGTCGGGGTTTCAGTCGAGATAATCTTTGCAAGAACTGCAAGCGGCCTGGCCATTTTGCAAGAGAATGCCAAGATGTCGCAATTTGTCACAATTGTAGTCTCCCTGGGCATATTGCTTCCGAGTGCACGACAAAGTCGCTATGTTGGAACTGTCGAGAACCCGGTCACATGGCAAGTAGCTGCCCCAATGAAGGCATTTGCCACACCTGTGGTAAGGCAGGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTCCCCACTGGCGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAATGAGAAGGCGTGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGTGAATGTCCAAATGACCCGATTTGCAACCTGTGTAATGTATCAGGGCATGTGGCCAGACAGTGTCCGAAGTCCAACGTCCTCGGAGACCGAGTAGACCGAGGCAGTGGCGGTGGCAGTGTGCGGGGTGGTGCTGGTGTTTACCGGGATGTTGTGTGTAGGACATGCCAGCAGCTTGGCCATATGAGTAGAGATTGCATGGGCCCTTTGATGATCTGCCATAACTGCGGGGGACGTGGTCACTTGGCATACGAATGCCCTTCTGGTCGGTTTATGGACCGTTATCCCCGGAGGTACTGATGATCAAAAGAGATAACACACGTTCTCGACAAGGTTAGACCTTCAGATTTTGCTTGGAGTTTAGATAATCTGAGAACTAAACTTTATAGATTGCTCTACTCGGTTGCATTGTAGTATTTGCCCGTGCTATTATTACGAAACATTGCTATGCGGTTTAGACAATGAATTTTCGGTCTCATTGATCTTGCTTCTATATAATATAAAGACTTCCTTTCATTGTTTGTTGATTTTCCTTGTAACGAAATTGCCTTGTTTGTAAACTATGAATTACCACTCTTGTTGAGATGTAACTGACCAAT ATGATGGAAGTGGTTTGGAGGAGGCAGCATCGGTGTGATATTTTGGTGGTGGTGGTGGTGGTATTTTCACGTATCAGTGGGAATAAGTATTGGAGAATAAGTTTGGATATGAGTTCAGATAGCAGGAGTCAAAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCCCACTGGATCGTAAAATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATCTCGTCGGGGTTTCAGTCGAGATAATCTTTGCAAGAACTGCAAGCGGCCTGGCCATTTTGCAAGAGAATGCCAAGATGTCGCAATTTGTCACAATTGTAGTCTCCCTGGGCATATTGCTTCCGAGTGCACGACAAAGTCGCTATGTTGGAACTGTCGAGAACCCGGTCACATGGCAAGTAGCTGCCCCAATGAAGGCATTTGCCACACCTGTGGTAAGGCAGGACATCGGGCCAGGGAATGCACGGCTCCTCCGCTCCCCACTGGCGACTTGAGGCTTTGCAATAATTGCTATAAGCAAGGTCATATAGCAGCTGATTGTACTAATGAGAAGGCGTGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGTGAATGTCCAAATGACCCGATTTGCAACCTGTGTAATGTATCAGGGCATGTGGCCAGACAGTGTCCGAAGTCCAACGTCCTCGGAGACCGAGTAGACCGAGGCAGTGGCGGTGGCAGTGTGCGGGGTGGTGCTGGTGTTTACCGGGATGTTGTGTGTAGGACATGCCAGCAGCTTGGCCATATGAGTAGAGATTGCATGGGCCCTTTGATGATCTGCCATAACTGCGGGGGACGTGGTCACTTGGCATACGAATGCCCTTCTGGTCGGTTTATGGACCGTTATCCCCGGAGGTACTGA MMEVVWRRQHRCDILVVVVVVFSRISGNKYWRISLDMSSDSRSQSRSRSRSRSRSRSPLDRKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECQDVAICHNCSLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARECTAPPLPTGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARECPNDPICNLCNVSGHVARQCPKSNVLGDRVDRGSGGGSVRGGAGVYRDVVCRTCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY Homology
BLAST of CmaCh19G006910 vs. ExPASy Swiss-Prot
Match: P53849 (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GIS2 PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 5.9e-25 Identity = 53/149 (35.57%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of CmaCh19G006910 vs. ExPASy Swiss-Prot
Match: P36627 (Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=byr3 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.8e-21 Identity = 61/187 (32.62%), Postives = 79/187 (42.25%), Query Frame = 0
BLAST of CmaCh19G006910 vs. ExPASy Swiss-Prot
Match: Q8T8R1 (CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster OX=7227 GN=CG3800 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14 Identity = 50/161 (31.06%), Postives = 69/161 (42.86%), Query Frame = 0
BLAST of CmaCh19G006910 vs. ExPASy Swiss-Prot
Match: O76743 (ATP-dependent RNA helicase glh-4 OS=Caenorhabditis elegans OX=6239 GN=glh-4 PE=1 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 1.4e-13 Identity = 48/148 (32.43%), Postives = 63/148 (42.57%), Query Frame = 0
BLAST of CmaCh19G006910 vs. ExPASy Swiss-Prot
Match: P62633 (Cellular nucleic acid-binding protein OS=Homo sapiens OX=9606 GN=CNBP PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.3e-08 Identity = 42/152 (27.63%), Postives = 65/152 (42.76%), Query Frame = 0
BLAST of CmaCh19G006910 vs. ExPASy TrEMBL
Match: A0A6J1HZW0 (zinc finger protein GIS2-like OS=Cucurbita maxima OX=3661 GN=LOC111468434 PE=4 SV=1) HSP 1 Score: 567.0 bits (1460), Expect = 4.7e-158 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CmaCh19G006910 vs. ExPASy TrEMBL
Match: A0A6J1GNK1 (zinc finger protein GIS2-like OS=Cucurbita moschata OX=3662 GN=LOC111455578 PE=4 SV=1) HSP 1 Score: 541.2 bits (1393), Expect = 2.7e-150 Identity = 250/258 (96.90%), Postives = 251/258 (97.29%), Query Frame = 0
BLAST of CmaCh19G006910 vs. ExPASy TrEMBL
Match: A0A6J1C2F8 (zinc finger protein GIS2 OS=Momordica charantia OX=3673 GN=LOC111007845 PE=4 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 3.8e-144 Identity = 242/259 (93.44%), Postives = 249/259 (96.14%), Query Frame = 0
BLAST of CmaCh19G006910 vs. ExPASy TrEMBL
Match: A0A1S3BIU7 (zinc finger protein GIS2 OS=Cucumis melo OX=3656 GN=LOC103490347 PE=4 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 5.0e-144 Identity = 242/258 (93.80%), Postives = 245/258 (94.96%), Query Frame = 0
BLAST of CmaCh19G006910 vs. ExPASy TrEMBL
Match: A0A0A0K138 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G006230 PE=4 SV=1) HSP 1 Score: 518.1 bits (1333), Expect = 2.5e-143 Identity = 240/258 (93.02%), Postives = 245/258 (94.96%), Query Frame = 0
BLAST of CmaCh19G006910 vs. NCBI nr
Match: KAG6572065.1 (DNA-binding protein HEXBP, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 592.4 bits (1526), Expect = 2.1e-165 Identity = 281/295 (95.25%), Postives = 283/295 (95.93%), Query Frame = 0
BLAST of CmaCh19G006910 vs. NCBI nr
Match: XP_022969420.1 (zinc finger protein GIS2-like [Cucurbita maxima]) HSP 1 Score: 567.0 bits (1460), Expect = 9.7e-158 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CmaCh19G006910 vs. NCBI nr
Match: XP_023553589.1 (zinc finger protein GIS2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 544.3 bits (1401), Expect = 6.7e-151 Identity = 255/264 (96.59%), Postives = 257/264 (97.35%), Query Frame = 0
BLAST of CmaCh19G006910 vs. NCBI nr
Match: XP_022953059.1 (zinc finger protein GIS2-like [Cucurbita moschata]) HSP 1 Score: 541.2 bits (1393), Expect = 5.7e-150 Identity = 250/258 (96.90%), Postives = 251/258 (97.29%), Query Frame = 0
BLAST of CmaCh19G006910 vs. NCBI nr
Match: XP_038887879.1 (zinc finger protein GIS2 [Benincasa hispida] >XP_038887880.1 zinc finger protein GIS2 [Benincasa hispida] >XP_038887881.1 zinc finger protein GIS2 [Benincasa hispida] >XP_038887882.1 zinc finger protein GIS2 [Benincasa hispida]) HSP 1 Score: 522.3 bits (1344), Expect = 2.7e-144 Identity = 242/258 (93.80%), Postives = 247/258 (95.74%), Query Frame = 0
BLAST of CmaCh19G006910 vs. TAIR 10
Match: AT1G75560.1 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 347.4 bits (890), Expect = 1.1e-95 Identity = 172/271 (63.47%), Postives = 203/271 (74.91%), Query Frame = 0
BLAST of CmaCh19G006910 vs. TAIR 10
Match: AT1G75560.2 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 347.4 bits (890), Expect = 1.1e-95 Identity = 172/271 (63.47%), Postives = 203/271 (74.91%), Query Frame = 0
BLAST of CmaCh19G006910 vs. TAIR 10
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 68.2 bits (165), Expect = 1.3e-11 Identity = 51/189 (26.98%), Postives = 73/189 (38.62%), Query Frame = 0
BLAST of CmaCh19G006910 vs. TAIR 10
Match: AT3G42860.1 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 63.9 bits (154), Expect = 2.5e-10 Identity = 42/129 (32.56%), Postives = 60/129 (46.51%), Query Frame = 0
BLAST of CmaCh19G006910 vs. TAIR 10
Match: AT5G52380.1 (VASCULAR-RELATED NAC-DOMAIN 6 ) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09 Identity = 37/121 (30.58%), Postives = 47/121 (38.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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