CmaCh19G006540 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G006540
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein .
Location	Cma_Chr19: 6893087 .. 6893788 (+)
RNA-Seq Expression	CmaCh19G006540
Synteny	CmaCh19G006540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCTTCAACTCTCTCTTGCCCTCCCGTCCGCCGCCACCGCCGCCACTACCGCCGCCGCCGCCGCCACCGCCACCACCACCGCCGCCGCCACGGTGGCTGCCGCCGCTGCAGCCTACGAGCTACACTTACTATCCTCATTGAGAACCCCCAACATTTTAGGAGTCCGTCAAACATCTCTCCGCCGTAGGAAGTGTAATTCTCCAACGACGGGGCCGATCGAGCCACCATATCCATGGTCGACGGACCGAATAGCGGTGGTTCATACGCTACACTATTTGACATTGAACCAAATCCTGACGATCACCGGGGATGTCAAGTGCCAGCAATGTCGGAGAATTTACGAGATCGAATACAACGTTGTTTCGAAGTTTAACGAGATTGGGAGCTTCGTAGAGCACAACATGGAGTCGTTCCGGGACCGGGCGCCAAAGAAGTGGATGCAGCCGAACTATCCGACGTGTCGGTTTTGCGGGGCGGAAAAAGGAGTGAAGCCGGTGATTCCAAAGGAATGGGAGAAGATCAATTGGGTGTTCTTGCTTTTGGGGGAAATGGTTGGAGCTTTGAAACTGAATCATTTGAAGTACTTTTGCAGTTACACGAAGAATCATCGAACAGGTTCAAAGGATCGTCTTGTTTATCTCACTTACATCACTTTGTGCCGCCAAATTGATCCTTCTGGCCGTTTCAGTCGAATTTGA

mRNA sequence

ATGGACCTTCAACTCTCTCTTGCCCTCCCGTCCGCCGCCACCGCCGCCACTACCGCCGCCGCCGCCGCCACCGCCACCACCACCGCCGCCGCCACGGTGGCTGCCGCCGCTGCAGCCTACGAGCTACACTTACTATCCTCATTGAGAACCCCCAACATTTTAGGAGTCCGTCAAACATCTCTCCGCCGTAGGAAGTGTAATTCTCCAACGACGGGGCCGATCGAGCCACCATATCCATGGTCGACGGACCGAATAGCGGTGGTTCATACGCTACACTATTTGACATTGAACCAAATCCTGACGATCACCGGGGATGTCAAGTGCCAGCAATGTCGGAGAATTTACGAGATCGAATACAACGTTGTTTCGAAGTTTAACGAGATTGGGAGCTTCGTAGAGCACAACATGGAGTCGTTCCGGGACCGGGCGCCAAAGAAGTGGATGCAGCCGAACTATCCGACGTGTCGGTTTTGCGGGGCGGAAAAAGGAGTGAAGCCGGTGATTCCAAAGGAATGGGAGAAGATCAATTGGGTGTTCTTGCTTTTGGGGGAAATGGTTGGAGCTTTGAAACTGAATCATTTGAAGTACTTTTGCAGTTACACGAAGAATCATCGAACAGGTTCAAAGGATCGTCTTGTTTATCTCACTTACATCACTTTGTGCCGCCAAATTGATCCTTCTGGCCGTTTCAGTCGAATTTGA

Coding sequence (CDS)

ATGGACCTTCAACTCTCTCTTGCCCTCCCGTCCGCCGCCACCGCCGCCACTACCGCCGCCGCCGCCGCCACCGCCACCACCACCGCCGCCGCCACGGTGGCTGCCGCCGCTGCAGCCTACGAGCTACACTTACTATCCTCATTGAGAACCCCCAACATTTTAGGAGTCCGTCAAACATCTCTCCGCCGTAGGAAGTGTAATTCTCCAACGACGGGGCCGATCGAGCCACCATATCCATGGTCGACGGACCGAATAGCGGTGGTTCATACGCTACACTATTTGACATTGAACCAAATCCTGACGATCACCGGGGATGTCAAGTGCCAGCAATGTCGGAGAATTTACGAGATCGAATACAACGTTGTTTCGAAGTTTAACGAGATTGGGAGCTTCGTAGAGCACAACATGGAGTCGTTCCGGGACCGGGCGCCAAAGAAGTGGATGCAGCCGAACTATCCGACGTGTCGGTTTTGCGGGGCGGAAAAAGGAGTGAAGCCGGTGATTCCAAAGGAATGGGAGAAGATCAATTGGGTGTTCTTGCTTTTGGGGGAAATGGTTGGAGCTTTGAAACTGAATCATTTGAAGTACTTTTGCAGTTACACGAAGAATCATCGAACAGGTTCAAAGGATCGTCTTGTTTATCTCACTTACATCACTTTGTGCCGCCAAATTGATCCTTCTGGCCGTTTCAGTCGAATTTGA

Protein sequence

MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTSLRRRKCNSPTTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI

Homology

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BLAST of CmaCh19G006540 vs. ExPASy TrEMBL
Match: A0A6J1I5V9 (uncharacterized protein LOC111470968 OS=Cucurbita maxima OX=3661 GN=LOC111470968 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 6.3e-118
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 23  ATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTSLRRRKCNSPTTGPIEPPYPWST 82
           ATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTSLRRRKCNSPTTGPIEPPYPWST
Sbjct: 6   ATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTSLRRRKCNSPTTGPIEPPYPWST 65

Query: 83  DRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSFVEHNMESFRDR 142
           DRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSFVEHNMESFRDR
Sbjct: 66  DRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSFVEHNMESFRDR 125

Query: 143 APKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKLNHLKYFCSYTK 202
           APKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKLNHLKYFCSYTK
Sbjct: 126 APKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKLNHLKYFCSYTK 185

Query: 203 NHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           NHRTGSKDRLVYLTYITLCRQIDPSGRFSRI
Sbjct: 186 NHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 216

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BLAST of CmaCh19G006540 vs. ExPASy TrEMBL
Match: A0A6J1GLD4 (uncharacterized protein LOC111455388 OS=Cucurbita moschata OX=3662 GN=LOC111455388 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.5e-114
Identity = 214/233 (91.85%), Postives = 219/233 (93.99%), Query Frame = 0


Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           MDL+LSLALPSAATAAT+AA         AATVAAAAAAYELHLLSSLRTPN LGVRQTS
Sbjct: 1   MDLKLSLALPSAATAATSAA--------TAATVAAAAAAYELHLLSSLRTPNNLGVRQTS 60

Query: 61  LRRRKCNSPTTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYN 120
           LR RK NSPTTGPIEPPYPWSTDRIAVVHTLHYLT NQILTITG+VKCQQCRRIYEIEY+
Sbjct: 61  LRLRKSNSPTTGPIEPPYPWSTDRIAVVHTLHYLTSNQILTITGEVKCQQCRRIYEIEYD 120

Query: 121 VVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL 180
           VVSKFNEIGSFVEHNMESFRDRAPK+WMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL
Sbjct: 121 VVSKFNEIGSFVEHNMESFRDRAPKEWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL 180

Query: 181 LLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           LLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFS I
Sbjct: 181 LLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSPI 225

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BLAST of CmaCh19G006540 vs. ExPASy TrEMBL
Match: A0A1S3BHR1 (uncharacterized protein LOC103489770 OS=Cucumis melo OX=3656 GN=LOC103489770 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67
Identity = 139/234 (59.40%), Postives = 167/234 (71.37%), Query Frame = 0


Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           +DLQLSL  PS    +  +  A          +  A A    + L++ R    LG R++S
Sbjct: 10  LDLQLSLRPPSGDLRSRPSPPA----------IGHARA----NALTNRRITRNLGTRRSS 69

Query: 61  LRRRKCNSP-TTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEY 120
           LRR    SP TT  IEPPYPWST+R A+V TL+ L  +QIL ITGDV+C+QC+  Y IEY
Sbjct: 70  LRRCNSRSPRTTETIEPPYPWSTNRRAMVRTLNDLRSSQILQITGDVRCRQCQIEYTIEY 129

Query: 121 NVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVF 180
           ++VSKF EI SFVE N   FRDRAP+ WM PNYPTCRFCG E G +PVIP EW KINW+F
Sbjct: 130 DMVSKFEEIASFVEENKNLFRDRAPRSWMNPNYPTCRFCGHENGARPVIPDEWRKINWLF 189

Query: 181 LLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           LLLGEM+G L LNHLKYFCSYT NHRTG+K+RL+YLTYITLC Q+DPSGRF+R+
Sbjct: 190 LLLGEMLGVLNLNHLKYFCSYTNNHRTGAKNRLLYLTYITLCHQVDPSGRFNRV 229

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BLAST of CmaCh19G006540 vs. ExPASy TrEMBL
Match: A0A0A0K3Q8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259350 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.2e-65
Identity = 136/234 (58.12%), Postives = 165/234 (70.51%), Query Frame = 0


Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           +DL+LSL  PS   ++  +AA        A T              ++R    LG R++S
Sbjct: 16  LDLRLSLRPPSGHLSSQPSAAPIGHARPNAVT--------------NMRVTRSLGTRRSS 75

Query: 61  LRRRKCNSP-TTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEY 120
            +R    SP TT  IEPPYPWST+R A+V TL+ L  NQIL ITGDV+C+QC+  Y IEY
Sbjct: 76  HQRCNSRSPRTTETIEPPYPWSTNRRAMVRTLNDLKSNQILQITGDVQCRQCQVEYTIEY 135

Query: 121 NVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVF 180
           ++ SKF EI SFVE N  SFRDRAP+ WM PNYPTCRFCG E G +PVIPK+W KINW+F
Sbjct: 136 DMDSKFEEIASFVEENKNSFRDRAPQSWMNPNYPTCRFCGHENGARPVIPKQWRKINWLF 195

Query: 181 LLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           LLLGEM+G L LNHLKYFCS T NHRTG+K+RL+YLTYITLC Q+DPSGRF+R+
Sbjct: 196 LLLGEMLGVLNLNHLKYFCSNTYNHRTGAKNRLLYLTYITLCHQVDPSGRFNRV 235

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BLAST of CmaCh19G006540 vs. ExPASy TrEMBL
Match: A0A5A7T547 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00840 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 3.3e-58
Identity = 127/219 (57.99%), Postives = 152/219 (69.41%), Query Frame = 0


Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           +DLQLSL  PS    +  +  A          +  A A    + L++ R    LG R++S
Sbjct: 10  LDLQLSLRPPSGDLRSRPSPPA----------IGHARA----NALTNRRITRNLGTRRSS 69

Query: 61  LRRRKCNSP-TTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEY 120
           LRR    SP TT  IEPPYPWST+R A+V TL+ L  +QIL ITGDV+C+QC+  Y IEY
Sbjct: 70  LRRCNSRSPRTTETIEPPYPWSTNRRAMVRTLNDLRSSQILQITGDVRCRQCQIEYTIEY 129

Query: 121 NVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVF 180
           ++VSKF EI SFVE N   FRDRAP+ WM PNYPTCRFCG E G +PVIP EW KINW+F
Sbjct: 130 DMVSKFEEIASFVEENKNLFRDRAPRSWMNPNYPTCRFCGHENGARPVIPDEWRKINWLF 189

Query: 181 LLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYI 219
           LLLGEM+G L LNHLKYFCSYT NHRTG+K+RL+YLT I
Sbjct: 190 LLLGEMLGVLNLNHLKYFCSYTNNHRTGAKNRLLYLTKI 214

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BLAST of CmaCh19G006540 vs. NCBI nr
Match: XP_022972401.1 (uncharacterized protein LOC111470968 [Cucurbita maxima])

HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 23  ATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTSLRRRKCNSPTTGPIEPPYPWST 82
           ATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTSLRRRKCNSPTTGPIEPPYPWST
Sbjct: 6   ATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTSLRRRKCNSPTTGPIEPPYPWST 65

Query: 83  DRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSFVEHNMESFRDR 142
           DRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSFVEHNMESFRDR
Sbjct: 66  DRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSFVEHNMESFRDR 125

Query: 143 APKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKLNHLKYFCSYTK 202
           APKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKLNHLKYFCSYTK
Sbjct: 126 APKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKLNHLKYFCSYTK 185

Query: 203 NHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           NHRTGSKDRLVYLTYITLCRQIDPSGRFSRI
Sbjct: 186 NHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 216

[Close]

BLAST of CmaCh19G006540 vs. NCBI nr
Match: XP_022952797.1 (uncharacterized protein LOC111455388 [Cucurbita moschata])

HSP 1 Score: 421.4 bits (1082), Expect = 5.1e-114
Identity = 214/233 (91.85%), Postives = 219/233 (93.99%), Query Frame = 0


Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           MDL+LSLALPSAATAAT+AA         AATVAAAAAAYELHLLSSLRTPN LGVRQTS
Sbjct: 1   MDLKLSLALPSAATAATSAA--------TAATVAAAAAAYELHLLSSLRTPNNLGVRQTS 60

Query: 61  LRRRKCNSPTTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYN 120
           LR RK NSPTTGPIEPPYPWSTDRIAVVHTLHYLT NQILTITG+VKCQQCRRIYEIEY+
Sbjct: 61  LRLRKSNSPTTGPIEPPYPWSTDRIAVVHTLHYLTSNQILTITGEVKCQQCRRIYEIEYD 120

Query: 121 VVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL 180
           VVSKFNEIGSFVEHNMESFRDRAPK+WMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL
Sbjct: 121 VVSKFNEIGSFVEHNMESFRDRAPKEWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL 180

Query: 181 LLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           LLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFS I
Sbjct: 181 LLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSPI 225

[Close]

BLAST of CmaCh19G006540 vs. NCBI nr
Match: KAG6572022.1 (hypothetical protein SDJN03_28750, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 403.7 bits (1036), Expect = 1.1e-108
Identity = 202/233 (86.70%), Postives = 210/233 (90.13%), Query Frame = 0


Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           MDL+LSLALPSAATAAT             +T  +AAAAYELHLLSSLRTPN LGVRQTS
Sbjct: 1   MDLKLSLALPSAATAAT-------------STATSAAAAYELHLLSSLRTPNNLGVRQTS 60

Query: 61  LRRRKCNSPTTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYN 120
           LRRRK NSPTTGPIEPPYPWSTDRIAVV TL YLT NQILTITG+VKCQQCRRIYE+EY+
Sbjct: 61  LRRRKSNSPTTGPIEPPYPWSTDRIAVVQTLQYLTSNQILTITGEVKCQQCRRIYEMEYD 120

Query: 121 VVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL 180
           VVSKFNEIG FVEH MESFRDRAPK+WMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL
Sbjct: 121 VVSKFNEIGRFVEHKMESFRDRAPKEWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL 180

Query: 181 LLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           LLGEM+GALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFS I
Sbjct: 181 LLGEMIGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSPI 220

[Close]

BLAST of CmaCh19G006540 vs. NCBI nr
Match: XP_023511615.1 (uncharacterized protein LOC111776409 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.3 bits (1022), Expect = 4.6e-107
Identity = 198/233 (84.98%), Postives = 208/233 (89.27%), Query Frame = 0


Query: 1   MDLQLSLALPSAATAATTAAAAATATTTAAATVAAAAAAYELHLLSSLRTPNILGVRQTS 60
           MDL+LSLALPSAATAA                 + AAAAYELHLLSSLRTPN LGVRQTS
Sbjct: 1   MDLKLSLALPSAATAA----------------ASTAAAAYELHLLSSLRTPNNLGVRQTS 60

Query: 61  LRRRKCNSPTTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYN 120
           LRRRKCNSPTTG IEPPYPWSTDRIAVVHTLHYLT NQI+TITG+VKCQQCRRIYE+EY+
Sbjct: 61  LRRRKCNSPTTGRIEPPYPWSTDRIAVVHTLHYLTSNQIVTITGEVKCQQCRRIYEMEYD 120

Query: 121 VVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL 180
           VVSKFNEIG FVE+ MESFRDRAPK+WMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL
Sbjct: 121 VVSKFNEIGRFVENKMESFRDRAPKEWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFL 180

Query: 181 LLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           LLGEMVGAL+LNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQI PSGRF+ I
Sbjct: 181 LLGEMVGALRLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIHPSGRFTPI 217

[Close]

BLAST of CmaCh19G006540 vs. NCBI nr
Match: KAG7011694.1 (hypothetical protein SDJN02_26600, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.0 bits (855), Expect = 1.1e-87
Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 72  GPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNVVSKFNEIGSF 131
           GPIEPPYPWSTDRIAVVHTL YLT NQILTITG+VKCQQCRRIYE+EY+VVSKFNEIG F
Sbjct: 2   GPIEPPYPWSTDRIAVVHTLQYLTSNQILTITGEVKCQQCRRIYEMEYDVVSKFNEIGRF 61

Query: 132 VEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKL 191
           VEH MESFRDRAPK+WMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKL
Sbjct: 62  VEHKMESFRDRAPKEWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLLLGEMVGALKL 121

Query: 192 NHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSRI 234
           NHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFS I
Sbjct: 122 NHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFSPI 163

[Close]

BLAST of CmaCh19G006540 vs. TAIR 10
Match: AT1G49330.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 174.9 bits (442), Expect = 7.7e-44
Identity = 76/165 (46.06%), Postives = 105/165 (63.64%), Query Frame = 0


Query: 62  RRRKCNSPTTGPIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRIYEIEYNV 121
           R R   S  +  I PP+PW+T+R   + +L YL  NQI TITG+V+C+ C ++Y++ YN+
Sbjct: 155 RSRSTVSKKSDTISPPFPWATNRRGEIQSLEYLESNQITTITGEVQCRHCEKVYQVSYNL 214

Query: 122 VSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEKINWVFLL 181
             +F E+  F        RDRA K W  P    C  CG EK VKPVI +   +INW+FLL
Sbjct: 215 RERFAEVVKFYLTEKRKMRDRAHKDWAYPEQRRCELCGREKAVKPVIAERKSQINWLFLL 274

Query: 182 LGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDP 227
           LG+ +G   L  LK FC ++KNHRTG+KDR++YLTY+ LC+ + P
Sbjct: 275 LGQTLGFCTLEQLKNFCKHSKNHRTGAKDRVLYLTYMGLCKMLQP 319

[Close]

BLAST of CmaCh19G006540 vs. TAIR 10
Match: AT2G16190.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-40
Identity = 76/177 (42.94%), Postives = 107/177 (60.45%), Query Frame = 0


Query: 63  RRKCNSPTTG--------PIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRI 122
           RR    P  G         I PPYPW+T +   + +   L+ N I  I+G V C+ C R 
Sbjct: 128 RRNSKRPVAGVERNVGDREIVPPYPWATKKPGKIQSFRDLSSNNINVISGQVHCKTCDRT 187

Query: 123 YEIEYNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEK 182
             +EYN+  KF+E+  +++ N E  R RAP  W  P    CR C +E  +KPV+ +  E+
Sbjct: 188 DTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKLIPCRTCKSE--MKPVMSERKEE 247

Query: 183 INWVFLLLGEMVGALKLNHLKYFCSYTKNHRTGSKDRLVYLTYITLCRQIDPSGRFS 232
           INW+FLLLG+M+G   L+ L+YFC     HRTGSKDR+VY+TY++LC+Q+DP G F+
Sbjct: 248 INWLFLLLGQMLGCCTLDQLRYFCQLNSKHRTGSKDRVVYITYLSLCKQLDPEGPFN 302

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BLAST of CmaCh19G006540 vs. TAIR 10
Match: AT2G16190.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-24
Identity = 58/152 (38.16%), Postives = 82/152 (53.95%), Query Frame = 0


Query: 63  RRKCNSPTTG--------PIEPPYPWSTDRIAVVHTLHYLTLNQILTITGDVKCQQCRRI 122
           RR    P  G         I PPYPW+T +   + +   L+ N I  I+G V C+ C R 
Sbjct: 128 RRNSKRPVAGVERNVGDREIVPPYPWATKKPGKIQSFRDLSSNNINVISGQVHCKTCDRT 187

Query: 123 YEIEYNVVSKFNEIGSFVEHNMESFRDRAPKKWMQPNYPTCRFCGAEKGVKPVIPKEWEK 182
             +EYN+  KF+E+  +++ N E  R RAP  W  P    CR C +E  +KPV+ +  E+
Sbjct: 188 DTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKLIPCRTCKSE--MKPVMSERKEE 247

Query: 183 INWVFLLLGEMVGALKLNHLKYFCSYTKNHRT 207
           INW+FLLLG+M+G   L+ L    S  K+H T
Sbjct: 248 INWLFLLLGQMLGCCTLDQLS---STPKDHLT 274

The following BLAST results are available for this feature:

BLAST of CmaCh19G006540 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh19G006540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5V9	6.3e-118	100.00	uncharacterized protein LOC111470968 OS=Cucurbita maxima OX=3661 GN=LOC111470968...	[more]
A0A6J1GLD4	2.5e-114	91.85	uncharacterized protein LOC111455388 OS=Cucurbita moschata OX=3662 GN=LOC1114553...	[more]
A0A1S3BHR1	1.3e-67	59.40	uncharacterized protein LOC103489770 OS=Cucumis melo OX=3656 GN=LOC103489770 PE=...	[more]
A0A0A0K3Q8	1.2e-65	58.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259350 PE=4 SV=1	[more]
A0A5A7T547	3.3e-58	57.99	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmaCh19G006540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972401.1	1.3e-117	100.00	uncharacterized protein LOC111470968 [Cucurbita maxima]	[more]
XP_022952797.1	5.1e-114	91.85	uncharacterized protein LOC111455388 [Cucurbita moschata]	[more]
KAG6572022.1	1.1e-108	86.70	hypothetical protein SDJN03_28750, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023511615.1	4.6e-107	84.98	uncharacterized protein LOC111776409 [Cucurbita pepo subsp. pepo]	[more]
KAG7011694.1	1.1e-87	94.44	hypothetical protein SDJN02_26600, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh19G006540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49330.1	7.7e-44	46.06	hydroxyproline-rich glycoprotein family protein	[more]
AT2G16190.1	1.0e-40	42.94	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein fam...	[more]
AT2G16190.2	2.3e-24	38.16	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34272:SF1	EXPRESSED PROTEIN	coord: 18..231
None	No IPR available	PANTHER	PTHR34272	EXPRESSED PROTEIN	coord: 18..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G006540.1	CmaCh19G006540.1	mRNA