CmaCh19G006440 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh19G006440
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionmethyltransferase-like protein 13
LocationCma_Chr19: 6837663 .. 6838239 (-)
RNA-Seq ExpressionCmaCh19G006440
SyntenyCmaCh19G006440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTTAAGTTAGGATGCCAGTATGCCCTTTTAGAGAGCCTAGTGGCTAGTTTAGACAAGGGCCTGATTCCTTCTGTGAGCCATAGTTTGGACTTTCAACAACCCGGGTTGGTTTTCTGTCAATCAAAAGTGTTCATAAACTCTCGGAATATGGTTGTCTTCATGAGTACTTCCAGTAATTCTCGACTTGATTATGCATCTTTCAACAATCGCAATAAAAGTTCGTGTATGTCTTTCATTTCTACTGGTAAATGCAATTGCTATTACCAGGGAAGGCGATCATCGGATGATAAAGATGAAGGTGAGAGATCAGTTACACCGTTGATCTGTCTACTTCAAGACGAGCTAGAGGGTGAAGATTACATGTTCAGAACAGACGTCGATGAGCTGAATTGCTAGTAGTAGTATTATCGTATCCGTTTTTGTTTAACGAATTGTACATCAAAATCAATCATAGTTTCACTAAGCTGTTATTCTGGCTGTTAGTTTTCCCCCCAAGTTCTGAATGGTTTAAGGCTTTATATATTGCTATTCATATTTGTATAGTTTCGTTCTTCAAATGGTGACCGTTTGA

mRNA sequence

ATGAACCTTAAGTTAGGATGCCAGTATGCCCTTTTAGAGAGCCTAGTGGCTAGTTTAGACAAGGGCCTGATTCCTTCTGTGAGCCATAGTTTGGACTTTCAACAACCCGGGTTGGTTTTCTGTCAATCAAAAGTGTTCATAAACTCTCGGAATATGGTTGTCTTCATGAGTACTTCCAGTAATTCTCGACTTGATTATGCATCTTTCAACAATCGCAATAAAAGTTCGTGTATGTCTTTCATTTCTACTGGTAAATGCAATTGCTATTACCAGGGAAGGCGATCATCGGATGATAAAGATGAAGGTGAGAGATCAGTTACACCGTTGATCTGTCTACTTCAAGACGAGCTAGAGGGTGAAGATTACATGTTCAGAACAGACGTCGATGAGCTGAATTGCTATTTCGTTCTTCAAATGGTGACCGTTTGA

Coding sequence (CDS)

ATGAACCTTAAGTTAGGATGCCAGTATGCCCTTTTAGAGAGCCTAGTGGCTAGTTTAGACAAGGGCCTGATTCCTTCTGTGAGCCATAGTTTGGACTTTCAACAACCCGGGTTGGTTTTCTGTCAATCAAAAGTGTTCATAAACTCTCGGAATATGGTTGTCTTCATGAGTACTTCCAGTAATTCTCGACTTGATTATGCATCTTTCAACAATCGCAATAAAAGTTCGTGTATGTCTTTCATTTCTACTGGTAAATGCAATTGCTATTACCAGGGAAGGCGATCATCGGATGATAAAGATGAAGGTGAGAGATCAGTTACACCGTTGATCTGTCTACTTCAAGACGAGCTAGAGGGTGAAGATTACATGTTCAGAACAGACGTCGATGAGCTGAATTGCTATTTCGTTCTTCAAATGGTGACCGTTTGA

Protein sequence

MNLKLGCQYALLESLVASLDKGLIPSVSHSLDFQQPGLVFCQSKVFINSRNMVVFMSTSSNSRLDYASFNNRNKSSCMSFISTGKCNCYYQGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNCYFVLQMVTV
Homology
[Close]
BLAST of CmaCh19G006440 vs. ExPASy TrEMBL
Match: A0A6J1I4L7 (methyltransferase-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111470938 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.7e-15
Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 

Query: 91  QGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           +GRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC
Sbjct: 215 KGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 257

[Close]
BLAST of CmaCh19G006440 vs. ExPASy TrEMBL
Match: A0A6J1GLR7 (methyltransferase-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111455500 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 0 

Query: 91  QGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           +GRRSSDD DE ERSVTP ICLLQDELEGEDYMFRTDVDELNC
Sbjct: 215 KGRRSSDDIDEVERSVTPSICLLQDELEGEDYMFRTDVDELNC 257

[Close]
BLAST of CmaCh19G006440 vs. ExPASy TrEMBL
Match: A0A6J1C2X9 (methyltransferase-like protein 13 OS=Momordica charantia OX=3673 GN=LOC111007974 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 9.1e-11
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 90  YQGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           ++GRRSSDDK E ERS  P ICLLQ+ELEGEDYMFRT+VDELNC
Sbjct: 214 HKGRRSSDDKGEDERSEMPSICLLQEELEGEDYMFRTNVDELNC 257

[Close]
BLAST of CmaCh19G006440 vs. ExPASy TrEMBL
Match: A0A5D3C5Z9 (Methyltransferase-like protein 13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00050 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 34/43 (79.07%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 91  QGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           +GRR   DK EGER   P ICLLQDELEGEDYMFRTDVDELNC
Sbjct: 220 KGRRLPSDKGEGERFDEPSICLLQDELEGEDYMFRTDVDELNC 262

[Close]
BLAST of CmaCh19G006440 vs. ExPASy TrEMBL
Match: A0A5A7SM21 (Methyltransferase-like protein 13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00050 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 34/43 (79.07%), Postives = 35/43 (81.40%), Query Frame = 0 

Query: 91  QGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           +GRR   DK EGER   P ICLLQDELEGEDYMFRTDVDELNC
Sbjct: 215 KGRRLPSDKGEGERFDEPSICLLQDELEGEDYMFRTDVDELNC 257

[Close]
BLAST of CmaCh19G006440 vs. NCBI nr
Match: XP_022972362.1 (methyltransferase-like protein 13 [Cucurbita maxima])

HSP 1 Score: 91.7 bits (226), Expect = 5.6e-15
Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 

Query: 91  QGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           +GRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC
Sbjct: 215 KGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 257

[Close]
BLAST of CmaCh19G006440 vs. NCBI nr
Match: XP_023554027.1 (methyltransferase-like protein 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 89.0 bits (219), Expect = 3.6e-14
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0 

Query: 91  QGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           +GRRSSDDKDEGERS+TP ICLLQDELEGEDYMFRTDVDELNC
Sbjct: 215 KGRRSSDDKDEGERSITPSICLLQDELEGEDYMFRTDVDELNC 257

[Close]
BLAST of CmaCh19G006440 vs. NCBI nr
Match: KAG7011687.1 (Protein TIC 62, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-12
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 0 

Query: 91  QGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           +GRRSSDD DE ERSVTP ICLLQDELEGEDYMFRTDVDELNC
Sbjct: 667 KGRRSSDDMDEVERSVTPSICLLQDELEGEDYMFRTDVDELNC 709

[Close]
BLAST of CmaCh19G006440 vs. NCBI nr
Match: XP_022952986.1 (methyltransferase-like protein 13 [Cucurbita moschata] >KAG6572013.1 EEF1A lysine methyltransferase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-12
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 0 

Query: 91  QGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           +GRRSSDD DE ERSVTP ICLLQDELEGEDYMFRTDVDELNC
Sbjct: 215 KGRRSSDDIDEVERSVTPSICLLQDELEGEDYMFRTDVDELNC 257

[Close]
BLAST of CmaCh19G006440 vs. NCBI nr
Match: XP_022136226.1 (methyltransferase-like protein 13 [Momordica charantia])

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-10
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 0 

Query: 90  YQGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDELNC 134
           ++GRRSSDDK E ERS  P ICLLQ+ELEGEDYMFRT+VDELNC
Sbjct: 214 HKGRRSSDDKGEDERSEMPSICLLQEELEGEDYMFRTNVDELNC 257

[Close]
BLAST of CmaCh19G006440 vs. TAIR 10
Match: AT4G34360.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-05
Identity = 22/40 (55.00%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 91  QGRRSSDDKDEGERSVTPLICLLQDELEGEDYMFRTDVDE 131
           +G+R +D+K E E+   P I L QDELEGEDY+FRT +D+
Sbjct: 207 KGKRCNDEK-EDEKCNDPSISLYQDELEGEDYLFRTRIDD 245

The following BLAST results are available for this feature:
BLAST of CmaCh19G006440 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh19G006440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I4L72.7e-1597.67methyltransferase-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111470938 PE... [more]
A0A6J1GLR71.3e-1290.70methyltransferase-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111455500 ... [more]
A0A6J1C2X99.1e-1179.55methyltransferase-like protein 13 OS=Momordica charantia OX=3673 GN=LOC111007974... [more]
A0A5D3C5Z91.3e-0979.07Methyltransferase-like protein 13 isoform X2 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5A7SM211.3e-0979.07Methyltransferase-like protein 13 isoform X2 OS=Cucumis melo var. makuwa OX=1194... [more]
BLAST of CmaCh19G006440 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022972362.15.6e-1597.67methyltransferase-like protein 13 [Cucurbita maxima][more]
XP_023554027.13.6e-1493.02methyltransferase-like protein 13 [Cucurbita pepo subsp. pepo][more]
KAG7011687.11.5e-1290.70Protein TIC 62, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022952986.12.6e-1290.70methyltransferase-like protein 13 [Cucurbita moschata] >KAG6572013.1 EEF1A lysin... [more]
XP_022136226.11.9e-1079.55methyltransferase-like protein 13 [Momordica charantia][more]
BLAST of CmaCh19G006440 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G34360.11.9e-0555.00S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G006440.1CmaCh19G006440.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
molecular_function GO:0008168 methyltransferase activity