CmaCh19G006310 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G006310
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr19: 6784622 .. 6785989 (-)
RNA-Seq Expression	CmaCh19G006310
Synteny	CmaCh19G006310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTAACCTCCCAGATGAAAGAGGAGGTGATTTGGGGTGGGAGAAGAACAAAGAACATACAAAAGAAAGTATCGGAAGAGAACCCTCTAGAGGGATCGAGGGTCGACAACCATTTCACCAGCAGAGCTTCATTACGTGAACTGAAGCTCCCTATGGCTAGGCCACCCGACTCCACTAGCTTAACTACTACCTCCCACTTAACATGATTAGGAATCACTACAACGGCAGTAAGATTCAGATTACCTTATTGATCGAATATCTCAAGACAAGAATATTTGGTTGAGACTCAATCACTCCACAAGCTTGAATGATTCTAGACATGTCATCTAAACTATATAGAATTGCAAAGAAACTTAACCCTTCGATAAGAAAAGGTAAGAACACTTGACCCTAATGATAAGAAATCACTCCATGGGAAAGCAAAATTTAGATCACATTATTGATCAAATATCTCAAGACAAGAACATGGTTGAGACTCGAATCCCTCCACAAGCAAGCTTGATCATGTCAAGCTTGAATGATTCTAAACATGCAACTTAAACTACGTAGAATCACAAAGAAATTTAGTCTTTAGCTAACGAAAGGTAAGAACACTCGGCCTTGATGATAAGAAATCATTCCAAGGGAAAGTAAAATTCATATCATCTTGTTGATCAAATATCTCAAAGGCTCAGAATACTTGTTTGAGATTCAGATCACTCTACAAGGTCAATCATGTCAAGCTTGAATGATTCTAACCTAAAAACCGGTCGATCTCTAGAAGAATATGCATTTTCCTCCCATCCAAACAGAAGAACAACATACTACATTGCCATTCTTTCGAAAGCAGAAAGGGAGAAAGAGAAAGAGGCCAAATGAATTTTGTCGATAGTTTTGACTGATAGAAACAATTGAGTTATAAGTAGTAAAAGTAACAGATTAACTTACAAATTCTGATTGATTCAACAATATCACCATTAACATTATAGCACCTTCTCACTCACTCTGCCTCCTCCACAGATGCCTCAATCCTGAGAAGAACAAACCCCACCGCCACTCCAACAAGAACAAGCCCATTGATAATGGCGGCGATCCTGAAAATCTCACCGGCGGCATTACAGGTAGAAGAGAGAGCCCCACCGCCGTTTTTGCCTTTTCCCTTTGATGGGTATTTCAAAGAACTCACAATGTTAGCAAATGACTGATCGGCACAAACGGGAAGGCCCAAGGAGAAGATATTGTTGTGAGCTTTCAAGCCACCAAAGGAGTTGAGGCCAGTGATGTAATGGACATTGGTGTTCCTCTGCCGCCTAGAGCCGGCGGCGATGGGGGCGGCGGTGGATATGGCCGGCGAGAGGGTAGCGGAGGCTGTAGCCGCCATTGA

mRNA sequence

ATGGATTTTAACCTCCCAGATGAAAGAGGAGGTGATTTGGGGTGGGAGAAGAACAAAGAACATACAAAAGAAAGTATCGGAAGAGAACCCTCTAGAGGGATCGAGGGTCGACAACCATTTCACCAGCAGAGCTTCATTACATGCCTCAATCCTGAGAAGAACAAACCCCACCGCCACTCCAACAAGAACAAGCCCATTGATAATGGCGGCGATCCTGAAAATCTCACCGGCGGCATTACAGCCACCAAAGGAGTTGAGGCCAGTGATGTAATGGACATTGGTGTTCCTCTGCCGCCTAGAGCCGGCGGCGATGGGGGCGGCGGTGGATATGGCCGGCGAGAGGGTAGCGGAGGCTGTAGCCGCCATTGA

Coding sequence (CDS)

ATGGATTTTAACCTCCCAGATGAAAGAGGAGGTGATTTGGGGTGGGAGAAGAACAAAGAACATACAAAAGAAAGTATCGGAAGAGAACCCTCTAGAGGGATCGAGGGTCGACAACCATTTCACCAGCAGAGCTTCATTACATGCCTCAATCCTGAGAAGAACAAACCCCACCGCCACTCCAACAAGAACAAGCCCATTGATAATGGCGGCGATCCTGAAAATCTCACCGGCGGCATTACAGCCACCAAAGGAGTTGAGGCCAGTGATGTAATGGACATTGGTGTTCCTCTGCCGCCTAGAGCCGGCGGCGATGGGGGCGGCGGTGGATATGGCCGGCGAGAGGGTAGCGGAGGCTGTAGCCGCCATTGA

Protein sequence

MDFNLPDERGGDLGWEKNKEHTKESIGREPSRGIEGRQPFHQQSFITCLNPEKNKPHRHSNKNKPIDNGGDPENLTGGITATKGVEASDVMDIGVPLPPRAGGDGGGGGYGRREGSGGCSRH

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh19G006310 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh19G006310 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh19G006310 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh19G006310 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G006310.1	CmaCh19G006310.1	mRNA