CmaCh19G005740 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh19G005740
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr19: 6440805 .. 6442862 (-)
RNA-Seq ExpressionCmaCh19G005740
SyntenyCmaCh19G005740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAAAGGTGCTTGAAAATGTCAACACGTTTTTTTTTTTCTTCCATAAGCTCCGACAACACAATCAAAACAAAATTTAAAATATTGAAGAAAATTACAAAGACGTGCAAACAATATTTAATTTTAATTAATCATTTGTAATTAGTATTTAATTATTTTGCCGTACTCCGCCTTGCACTCCGCCCAAAGCTCGTCGGCCGTCGCGGCCATCAGCTCCACAAAGTAATCTTCGCTGTAACCATTTCTCATTTTCCGGTTAAGCTCCGCCACGAACCCACTCCCCAACCCCTCCAAATACTCCATAAACCTCGCCGTCACCCCTCCGCCGCCCTCATCCCACCTCTCACCATCTCCCGCCGCCGCTCACTCTCCTGGGACAAACCCGGATTTCAGCATCACGAATTCCGCCACCCCTTCGATAAGCCCGGCCGGCGCCTCACCGTTTCCAGTCCACTGCCACACTTTTCCCAGCTCCTGGTACAAAATTCCGGCGAATTCGCTCCTCAGGTCGCCGGATATTCAACGATGTAGTTTGCGGCGATGAATATGTCAGTGCCGGAAGTGTAGGAAACGACTTCGTTTTCGGCGTCGATGATGAGGCGGATTTTGTGGACAGTTTATGTCAGCGTTGACGTGTTTAAGAATGTTTGATTAATCCATTCAGAATGTTATCTTATTTATAATCAAATAAATTGGAAGATATAGAAATAATAATAAATGAAAATAAAAATAAATAGAAAAATATTGATAATAAGACAAATATCTAATATTTGTCTTATAATAAAATATAAAATATAATATATATGGTAAATTATAATTTATTCCTAAATATCCTTAACACCCCACCGCAAGTTAAGCGTCGAATTTAAACGAACGTGAAGCTTGAATCTAAAAAATTCAAAGAGGTTGAGAAACACTTTTCGTGAAGATATCAACAACCTGGTTCAGAGGAGGCGTAGAGAAACAATTTCTTGGCCATCAAAGATTGCAGAGGGATCGCCGCTCAGCGGTGATGCTGCCTTGGCTTCGGCGAGAATATGTCTAACCCATGAAGAGGGATTGTCACTTAGCGACGATGTTGTCTTGGCTCTAGTGAGAATATGTCTAACCTCAAGAAGTAGAAAGGGAAACCTAGAGCAAGGGACAAAGACAATGTTGAAGTCGGAAGAGGAGAGTCGCCATATTGGGCGAAGGAGCCAATTTTGGCCAGAAGGGCACTCGGAAGAGTTGCCACATTGGGCGAAGGAGCCAATTTTGGCAGGAAGGGCAGCGGCAACTTGGTTGGCGAATAGGTCAGTGCGGCACCCAGATTACAAAGGTAAATCTCTGCAAAAGGTTGATGGGCTTGTCGAGATTCCGTATATTTATGAAAAGAACACTGATAAGAATCCTGAGATTAGGGTTTTTGGGAAGAATGAAGGGTTGATTGGGAAGAAAATGAGGGAGACTATATTGGCCAAGGGAAAAACCGATTGGGTTGGAAAAGGTGAGGTTGTATGACTAAAGGTGATTTGGAGGTCAATAGGGTGGAGCTGAAGAGTAATTAATCGGCTCCGCCTGCGGCAGCCATGAAGACTGCCCCTGCGGCGTCAAAGCCACCAGGGGTGGTGAAGAAGAAGATTAGAGGATTAAAAAACCATTGAAAAGAAATGATCTCGGTTGAATATTATCTTATTTATAATCAAATAAATTACAAAGATATGAAAATAACACTAAATGAATCTATTAATTTATTACTAAATATCCTTATCACGGTTGGAATATTTTAAAGATAAAATCGGTAGCAATTTTTTTTTGAGTATTCTCTGCGTTAGAATTTTCGATTTCGAGGTTCAAACGAGTGCCGCCCGCGGTGTTTCCGGCGGCATTGGTGACGGAGACTCCGCTAGTTTGTGAGTTTTATGGAGGATAGAGTTATAAGGAAAGCTAGGAAGATTAGATTGTGGGAAGCCATGAAATTTGATTTATGAATGATTTTCTCTTCGGAGAAGACGATGATGTTTATATGGGAACCTGCAAGAGGCAAATTGGTCATTGGACAAATGGTCGATTTTGA

mRNA sequence

ATGTTCAAAGTATTTAATTATTTTGCCGTACTCCGCCTTGCACTCCGCCCAAAGCTCGTCGGCCGTCGCGGCCATCAGCTCCACAAAGTAATCTTCGCTGTAACCATTTCTCATTTTCCGGTTAAGCTCCGCCACGAACCCACTCCCCAACCCCTCCAAATACTCCATAAACCTCGCCGTCACCCCTCCGCCGCCCTCATCCCACCTCTCACCATCTCCCGCCGCCGCTCACTCTCCTGGGACAAACCCGGATTTCAGCATCACGAATTCCGCCACCCCTTCGATAAGCCCGGCCGGCGCCTCACCGTTTCCAGTCGCCGGATATTCAACGATGTAGTTTGCGGCGATGAATATGTCAGTGCCGGAAAATTTTCGATTTCGAGGTTCAAACGAGTGCCGCCCGCGGTGTTTCCGGCGGCATTGGTGACGGAGACTCCGCTAGTTTACGATGATGTTTATATGGGAACCTGCAAGAGGCAAATTGGTCATTGGACAAATGGTCGATTTTGA

Coding sequence (CDS)

ATGTTCAAAGTATTTAATTATTTTGCCGTACTCCGCCTTGCACTCCGCCCAAAGCTCGTCGGCCGTCGCGGCCATCAGCTCCACAAAGTAATCTTCGCTGTAACCATTTCTCATTTTCCGGTTAAGCTCCGCCACGAACCCACTCCCCAACCCCTCCAAATACTCCATAAACCTCGCCGTCACCCCTCCGCCGCCCTCATCCCACCTCTCACCATCTCCCGCCGCCGCTCACTCTCCTGGGACAAACCCGGATTTCAGCATCACGAATTCCGCCACCCCTTCGATAAGCCCGGCCGGCGCCTCACCGTTTCCAGTCGCCGGATATTCAACGATGTAGTTTGCGGCGATGAATATGTCAGTGCCGGAAAATTTTCGATTTCGAGGTTCAAACGAGTGCCGCCCGCGGTGTTTCCGGCGGCATTGGTGACGGAGACTCCGCTAGTTTACGATGATGTTTATATGGGAACCTGCAAGAGGCAAATTGGTCATTGGACAAATGGTCGATTTTGA

Protein sequence

MFKVFNYFAVLRLALRPKLVGRRGHQLHKVIFAVTISHFPVKLRHEPTPQPLQILHKPRRHPSAALIPPLTISRRRSLSWDKPGFQHHEFRHPFDKPGRRLTVSSRRIFNDVVCGDEYVSAGKFSISRFKRVPPAVFPAALVTETPLVYDDVYMGTCKRQIGHWTNGRF
Homology
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BLAST of CmaCh19G005740 vs. ExPASy TrEMBL
Match: A0A7N0TN05 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.1e-10
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 0 

Query: 9   AVLRLALRPKLVGRRGHQLHKVIFAVTISHFPVKLRHEPTPQPLQILHKPRRHPSAALIP 68
           AVL L L P+L+ R   QLH+V  AV   H  V+LRHEPT QPL ++ +PRRH    L+P
Sbjct: 14  AVLSLVLTPQLIHRLPQQLHEVAGAVRAPHLLVQLRHEPTTQPLAVVQEPRRH-VVPLVP 73

Query: 69  PLTISRRRSLSWDKPGFQHHEFRHPFDKPGRR 101
           PL + R   +    P  +  E RH   +P RR
Sbjct: 74  PLPLPRPHPVRRRVPAPEPDEVRHALHQPPRR 104

The following BLAST results are available for this feature:
BLAST of CmaCh19G005740 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh19G005740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7N0TN059.1e-1044.57Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1[more]
BLAST of CmaCh19G005740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CmaCh19G005740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G005740.1CmaCh19G005740.1mRNA