CmaCh19G004430 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G004430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	tobamovirus multiplication protein 2A-like
Location	Cma_Chr19: 5390970 .. 5396308 (+)
RNA-Seq Expression	CmaCh19G004430
Synteny	CmaCh19G004430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCGGACCGTCTTTCTCTAATTCCATTTTCTCTCTCTCTCTCTTCTGATTTCGAGGTCCGAGAAAGCGAGTAATCTGATAATCATCGTCTCTGAATTTGTAAGTTCTCCGATTTCTTCCTTGATCGTGTTAAGTTTTCATCTAGATTACGTCCGCTATTGCGGAGTTTTGTATGATTTCATTCTAAAGCCGAGAATATGGATATTGAGACAAATTGTGATGGTTTTGGTAATAATTCCGCTTTGATGGACGACGTAGGAAGGGAAGTATTCCGTTTGGTTGCTGAGATGCTGTGATGCAACTTGAAGGTTATGAGGATTTTATTAGTTCAGGTGTTGTTTTGGAAATTGGAAGCCGTCGTAGCTAAATTCTAGATTGGGATCCGTGTTTATTTGATATGAATCACATTTAATGCACGAATGTTCTAGCGAAGTTGTAATTTGTCTTACTTCCTTCAAGTTTGGGATATTTTAGTGGTAGAAATGACTAGCTGTATGTATGATGAACTTGTTTGTTTTTTTAATGAATACTAATTAGCGCTCTAATGCATGTACGATGCACATTTCAAATGTTGTTTTTAGCCCTCGAAAGCATATAGAGGATGGCCTGCAGAGGGTGCTTTGAGTGCCTGTTGAAGCTTCTGAACTTCTTTTTATCCCTTCTGGGTCTTGCCATGGTGGGGTATGGGATTTACTTGTTGGTTGACTACTTGCAATCTCCTAGTGATATCCCAAGACCTCCGTTGAGTGGTGATCACGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAACATCTTTGATCACCTTCCAAAAGCCTGGTATGACTTTTCCTTTTAAATATAATATGTTTGTTTCTTACTGCATGTAATGGCTGACTTTAGGCAGAACAAATATTCTGAAAAATAAAGGACATTGAGCTTCATAAGTAACTCATTGATTTGGTGGTCATATATCCTACCCCTGGGTCAGAAGTTCGATCCCCATTGTGCCCTTCCCCCCAATTCCTGTTGTAAGAATAAGATAACCTCTCAATTTTTTAGAAAAAAAAGAAAAGAAAAGAAAAAGAAGGAATGAGAGGTACATGATTAACGTCATGATGTGATGAAGTTTATGAAGCAGCTGAATTATGGATTCACTGATTGAAGATAAAAAAATTTATGAATTTCCTAAACATTCTACAATAGTGCTTTATCACCCAGTGTTCTAGAAGTCTCATTTAGTTTTAAGGTTCTGTTTGTTTGTTTGGAAACAGTTTAGTTTGCTGTCACAATGGATAGGTTCTACTTTTTCAAGAATATCCCGGATGCTCACAAATATTTTAAAAAATTAAAAAAAAAGCATACAAAAGGTTGTCTATTTTATCTTTTAACAGCAGAAACGCTTGAAGTGCATCAGTGAATCACAATCGATATTGATCTATATTGCTGAATGGAAATGTTATCACTTTTCAACTTTTATTCTTATTGCATAATTTCATGGAAACTCGAGCCAGTTTATTGAGTCTCATCAAGTACAGGAATTGGTGTACATATTGATTTTCTGTACAATGCATAAGTTACTGCCGAGAATATAAGATATTTCATACTGAAATAATGATATGCCATTTCAAAAGTACTGGATGTGACATTCTTGTCTCTTCTTCTTCATTATTTTTTTAAATTTTTTAATCTGAAAGGATTCTACTCCGGAATCTTCACATGTAAGCAAATTCATGTCATCGGTTAGTACATTTTAGCAGCTTAGAATAGTATGGATATTTGTGGCATCTGCTTAATCTGTTTCTTCTATTTTAATTCTTTTGCAGGTTCATATACTTGTTCATTGCTGTGGGAGTCATTATCTTTGTTGTTTCTTGTTTTGGGTGCATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTGTATCCTATTTGCCTGCATTGCTTCATTGTTATTTGATTTATGAATTAGTAATGAAACAATTAGGCCACCAGGGAACAACTTGTTGGCTTCAGGATAACTACACTGTTCATAGAGATAAGATGGTGATCTTAAATATAATACAACATAGTCATGATAACACATACGGTTTAATCTAAAAAATTTGACAGTGATTTTCCTATGATTTTTATGTTACTGTATCCTTAATGATCACAGTATTCAGTTTTGGTGCTTCTACTGATTTTGGTGCAAGTAGGATGTGCAGCCTTCATATTCTTTGACAAACATTGGAGAGATGTGAGTGGTTCACCTCACAAACTAAAATTGAAATTTTAGTTCATTTTCTTATTATTATTACTGTTATTCCATAGGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTTCTCGAAGACAAGTGGGAAATCATCAAATGGGTTGCACTAGGAGCTGTAATTTTTGAGGTACGTGAACCCCTTTTTTGAAGCTTTTGAATCTTAGACTGGCATGGCGGAGGCCTAATGCTGCTCTAACCTCTGAATGTCTTGCTTAGCAGAAATGTTACATGCACTGTAATTACTAAATTACTGGGATCTTCGTTATTTCTAATTCATGTGAATATATAACTTAATTTCGCATAAATATTGAATATTGTTGTAATTGTTTTATTATAGAACATAATAATTATATAATGATTAACAGAATATATCGCTAGAATTTTATTATTTAATTATCAAATGGATTTGTATCAATAATTGATGTGTTAATCCCAATTTGGTCCATTTTTGTTTTTGAATTCAAATGACATTTGAAATTCTTTTTCTTTTCTGATTTTTTGTTAATCTTATTTTAGTCTTTTTAGTTATCCACTCTACTGATTGAATTGTATCTTTTTAGTTATCTACTCTTTACTGATTGAATTGTATATCATTCTTTACTATGTTTGTATGCATTAAACATTGCACTTCTCAAGAAACAGATTGACCTGTTTCTTGCTGCTGAAACTCTGTCATCAAGAATATGTACTTTTACGCCCCTCATCAAATTTTAGAGTTTTTTTTTTTTTCTTCTTCTTCTTCTTTTTGCATCTCTCTTGAATTCTGGTTTAGTGCATTTTTTCCGCATGAGTTTAACATATGCGGTTGGTAGGTTCTTTAATTCCAATTTGTGATTTGCAATATAAATTCATTTTACTTTCACATCAATAATTAAAAAATTGGTTTTTTTGATCGCAAAAGACTTCATATGTAATACTTCAATGTTGCCCTAACATGATTTGCTTTACTTCTGTTTTTCCCTTTATTGATTTAACAACTTTGTGCTTTTGCCTAAGCCACTTATCTATAAACTCCCTTTTACCAATTTGGCCATGGATTTATTTGCTTTACACTGATTGTAACTTCTTTTTTCTCTCATTGAAATCATGATTTCCACCTTGTAATATTGTGTTTCATTGTATTTGCAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGTCCTGCAGACTATGACAGTGATGATGAGTACATTGCTCCAAGGCTACAAATCCGACAACCTTTGATCAATAGGCCTGTTGCTCCTGCAACAGGTGTACCTGTTGCTGGGGCACTTGATCAACGACCAAGCCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGGTATAACCACTTCTAGGTTGAATTTTGCCGCTGAAAATAATTAGAATGTAGAGAGACATGACAAAAACGAAAGGTCCTCCTTTCCTTTTATTCCTTTCCTTTTATTCTTTCATTTACTATAATAAAACGATGCTGATATAAACCCAAGAGCTAAAACATATTGAAAGGTAAAATATAGAGGAACTACAATAACTAAGTAATTCGAGGTGTTTGGATACCTTATGCTCCTCCCACTTTCTATTATGTTCAACTCCTACTAACAAGCTCCTTATCTACTTACTAATATGCCTTCAATACCCTAATAATATTTCTAACCAGCCAAATAGCATTCCTATTGGATACTAGGACTTCAGATGACACTTCATTATGTTCTGTATTTATGTTGGGAGATTCCATTTTGAAGTTGTATAAATAGCTTATATGATTGAGTATCCATTGTTAAATAGTCTTTTGGTTCCTCTCAGATACTCATGCGGATCAATCCTTGACAATTTTATTTTAAGTTCCCAACAAAATTTGGATGTCATTATTGGTTGACATTGAGCTGAAGACAACAGAGCTCAACTAATCAGATCGATAATTCTCAATCTCAAGAATTGAATTTTGATCGTTTGGAATCTGTTTCAGTAGTTAGCGTTGGACCCTTTATTGTTCAGACTTGGTGTTTTTTTTATGCTCTTATCTATTCTTTCTTGTCTCTCCATAAAAGTGCGGTTTCTTAAAATCTTGATTTCCAGACGTTATGCATCCTATTTGAACATTTGTAAAGCTTCCTGCCTGGGATAGTATTTTCCGTCTCTGCACGTTTGTTTCTTCCTGGCTACTACAATCAGACGTTATGCATCCTATTTGAACATTTGTAAAGCTTCCTGCCTGGGATAGTATTTTCCGTCTCTGCACGTTTGTTTCTTCCTGGCTACTACAATCAGATCTCGGACTTGAGGACCCAAATTCTTATTTTTACTTCTATAAATTATTATGATTGAATGGTGTCTGATCAACTGCCCACCGTTCTACGTATCGTATATATGTTTGGAACTCTTAATTGGAGATTTGTGTGGTAGCGTTTCCCCCTGACCATGAACTACTTCATATATGATCTGATGAGCAGTTTCTTTTCACAATGTGCTTCTGATGTAATGTTTATAACCTCTTTTGCATAAATTGCAATTCTGACGTTGGTTCTTTTTCTGTTTGAAACAGTATGGGCTGGATACTTCCGAGTTCACATACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCCCAACAGCCAGCAGAAGAAAAGAGCCGCTGCACCATCATGTGATCAGTATGTCTTGTATTATTTGTTTCTTACTCTACTTTAGCGTTTTAGCGGGTCGAATGCTTGTTCCACTTGTGTATAACCAAGAGGTTGTTCCGGAGGCTGTACTTGTATAACCTAAACTTTTCAGAATAAGAAATTTGTAACTATTTGTTGTGTGAAACCGTTCCTCTATATTTGGATTTCCTTTTTGTTCTAGACGGATGGGTCAGCACAGGACCAAGGAAAATGATTGTAAGCTCCATCTCACTTGGGAAAAGACTACTTGCTGGAAGTTGCTTTTAATTGTGAGTTCAATCCAAGTAAATATGCAATGTATATTCTGTGTCATGCTCGGTCTCTGCCCTCCTCAAGTCCTCTCGACTTCATGAAACATCCTTATATTTATTAATATCTGCTAGC

mRNA sequence

AACCGGACCGTCTTTCTCTAATTCCATTTTCTCTCTCTCTCTCTTCTGATTTCGAGGTCCGAGAAAGCGAGTAATCTGATAATCATCGTCTCTGAATTTGAAGGGAAGTATTCCGTTTGGTTGCTGAGATGCTGTGATGCAACTTGAAGGTTATGAGGATTTTATTAGTTCAGCCCTCGAAAGCATATAGAGGATGGCCTGCAGAGGGTGCTTTGAGTGCCTGTTGAAGCTTCTGAACTTCTTTTTATCCCTTCTGGGTCTTGCCATGGTGGGGTATGGGATTTACTTGTTGGTTGACTACTTGCAATCTCCTAGTGATATCCCAAGACCTCCGTTGAGTGGTGATCACGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAACATCTTTGATCACCTTCCAAAAGCCTGGTTCATATACTTGTTCATTGCTGTGGGAGTCATTATCTTTGTTGTTTCTTGTTTTGGGTGCATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTGTATCCTATTTGCCTGCATTGCTTCATTGTTATTTGATTTATGAATTAGTAATGAAACAATTAGGCCACCAGGGAACAACTTGTTGGCTTCAGGATAACTACACTGTTCATAGAGATAAGATGTATTCAGTTTTGGTGCTTCTACTGATTTTGGTGCAAGTAGGATGTGCAGCCTTCATATTCTTTGACAAACATTGGAGAGATGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTTCTCGAAGACAAGTGGGAAATCATCAAATGGGTTGCACTAGGAGCTGTAATTTTTGAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGTCCTGCAGACTATGACAGTGATGATGAGTACATTGCTCCAAGGCTACAAATCCGACAACCTTTGATCAATAGGCCTGTTGCTCCTGCAACAGGTGTACCTGTTGCTGGGGCACTTGATCAACGACCAAGCCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCCGAGTTCACATACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCCCAACAGCCAGCAGAAGAAAAGAGCCGCTGCACCATCATGTGATCAGTATGTCTTGTATTATTTGTTTCTTACTCTACTTTAGCGTTTTAGCGGGTCGAATGCTTGTTCCACTTGTGTATAACCAAGAGGTTGTTCCGGAGGCTGTACTTGTATAACCTAAACTTTTCAGAATAAGAAATTTGTAACTATTTGTTGTGTGAAACCGTTCCTCTATATTTGGATTTCCTTTTTGTTCTAGACGGATGGGTCAGCACAGGACCAAGGAAAATGATTGTAAGCTCCATCTCACTTGGGAAAAGACTACTTGCTGGAAGTTGCTTTTAATTGTGAGTTCAATCCAAGTAAATATGCAATGTATATTCTGTGTCATGCTCGGTCTCTGCCCTCCTCAAGTCCTCTCGACTTCATGAAACATCCTTATATTTATTAATATCTGCTAGC

Coding sequence (CDS)

ATGGCCTGCAGAGGGTGCTTTGAGTGCCTGTTGAAGCTTCTGAACTTCTTTTTATCCCTTCTGGGTCTTGCCATGGTGGGGTATGGGATTTACTTGTTGGTTGACTACTTGCAATCTCCTAGTGATATCCCAAGACCTCCGTTGAGTGGTGATCACGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAACATCTTTGATCACCTTCCAAAAGCCTGGTTCATATACTTGTTCATTGCTGTGGGAGTCATTATCTTTGTTGTTTCTTGTTTTGGGTGCATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTGTATCCTATTTGCCTGCATTGCTTCATTGTTATTTGATTTATGAATTAGTAATGAAACAATTAGGCCACCAGGGAACAACTTGTTGGCTTCAGGATAACTACACTGTTCATAGAGATAAGATGTATTCAGTTTTGGTGCTTCTACTGATTTTGGTGCAAGTAGGATGTGCAGCCTTCATATTCTTTGACAAACATTGGAGAGATGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTTCTCGAAGACAAGTGGGAAATCATCAAATGGGTTGCACTAGGAGCTGTAATTTTTGAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGTCCTGCAGACTATGACAGTGATGATGAGTACATTGCTCCAAGGCTACAAATCCGACAACCTTTGATCAATAGGCCTGTTGCTCCTGCAACAGGTGTACCTGTTGCTGGGGCACTTGATCAACGACCAAGCCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCCGAGTTCACATACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCCCAACAGCCAGCAGAAGAAAAGAGCCGCTGCACCATCATGTGA

Protein sequence

MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRPMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALLHCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEYIAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESHRFQQVAQQPAEEKSRCTIM

Homology

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BLAST of CmaCh19G004430 vs. ExPASy Swiss-Prot
Match: Q9C5W7 (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 6.0e-108
Identity = 198/321 (61.68%), Postives = 233/321 (72.59%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQ-SPSDIPRPPLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL V+Y + + + +     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAL 120
           P+LMAVSLSSNIFD+LPKAWFIYLFI +GV +FV+SC GC+G  +R+ CCLSC       
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSC------- 120

Query: 121 LHCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWR 180
                                             YS+L++LLILV++G AAFIFFD  WR
Sbjct: 121 ----------------------------------YSLLLILLILVELGFAAFIFFDNSWR 180

Query: 181 DEIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDE 240
           DE+P D+TGNFD IY  L + W+I++WVALGAV+FEALLFLLAL+VRAAN+PA+YDSDDE
Sbjct: 181 DELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAEYDSDDE 240

Query: 241 YIAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSE 300
           Y+APR QIRQP INR  AP TGVPVA  LDQRPSR+D WS RMREKYGLDTSEFTYNPSE
Sbjct: 241 YLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 280

Query: 301 SHRFQQVAQQPAEEKSRCTIM 321
           SHRFQQ+  QP EEK RCTIM
Sbjct: 301 SHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CmaCh19G004430 vs. ExPASy Swiss-Prot
Match: Q93XY5 (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.5e-26
Identity = 94/310 (30.32%), Postives = 141/310 (45.48%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPL---SGDHDLVQLGR 62
           C   F   LK+LNF  + +G++++ Y I++L +Y +     P P     SG      +  
Sbjct: 6   CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65

Query: 63  PM------LMAVSLSSNIFDH--------LPKAWFIYLFIAVGVIIFVVSCFGCIGAATR 122
           P+      + ++ L SN  DH        LP  WFIY F+AVG+++ +V+  G I A   
Sbjct: 66  PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125

Query: 123 NGCCLSCVSYLPALLHCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQ 182
           NGCCL           C+                              YS+L  LLIL++
Sbjct: 126 NGCCL-----------CF------------------------------YSILKTLLILLE 185

Query: 183 VGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVV 242
               A+I  D+HW  ++P D TG    +   +E+  +I KWV +  V  + L  LLA+V+
Sbjct: 186 AALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVL 245

Query: 243 RAANS----PADYDSDDEYIAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTR 292
           RA  S      D + DDE   PR +   PL+     P      AG+     S+ + WS+R
Sbjct: 246 RAMVSTPKPELDEEEDDE--NPRSRTWDPLL----GPQGNQAPAGS-----SKIENWSSR 263

[Close]

BLAST of CmaCh19G004430 vs. ExPASy Swiss-Prot
Match: Q9SVU4 (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-25
Identity = 91/326 (27.91%), Postives = 144/326 (44.17%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQS-PSDIP--RPPLSGDHD------ 62
           C   F  +LK+LNF  + +G++++ Y I++L  Y    P D P  +PP +   D      
Sbjct: 6   CHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFS 65

Query: 63  --LVQLGR---------PMLMAVSLSSNIFD--------HLPKAWFIYLFIAVGVIIFVV 122
             ++++             +  + L S   D         LP  WFIY F+A+G+++ +V
Sbjct: 66  NSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIV 125

Query: 123 SCFGCIGAATRNGCCLSCVSYLPALLHCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMY 182
           +  G I A   NGCCL           C+                              Y
Sbjct: 126 TIIGFIAAEAINGCCL-----------CF------------------------------Y 185

Query: 183 SVLVLLLILVQVGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIF 242
           S+L  LLI+++     FI  D+HW  ++P D TG  + +   +E+  +I KWV +  V  
Sbjct: 186 SILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAI 245

Query: 243 EALLFLLALVVRAANSP--ADYDSDDEYIAPRLQIRQPLINRPVAPATGVPVAGALDQRP 299
           + L  LLALV+RA  SP  ++ D +D++  P  + R  L+          P A       
Sbjct: 246 QLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRARDNLLG---------PQANQTSSGS 280

[Close]

BLAST of CmaCh19G004430 vs. ExPASy Swiss-Prot
Match: Q940P5 (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.6e-20
Identity = 73/281 (25.98%), Postives = 122/281 (43.42%), Query Frame = 0


Query: 4   RGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRPMLM 63
           R C + +LKL+N  + ++G+AM+ Y ++L+  + +   ++P      DH           
Sbjct: 6   RSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPF--ADSDH----------- 65

Query: 64  AVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALLHCY 123
                       P  WFIY F+ +G I+ VV+C G I A T NGCCL             
Sbjct: 66  ------------PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCL------------- 125

Query: 124 LIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRDEIP 183
                                        +Y   ++LL +V+ G  A IF ++ W+ + P
Sbjct: 126 ----------------------------YLYMGFIVLLTMVEGGVVADIFLNRDWKKDFP 185

Query: 184 GDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRA--ANSPADYDSDDEYI 243
            D +G F +  + +E  ++I KW+ L  V  + L  L+A++++A   +    YDSDDEY 
Sbjct: 186 EDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYN 213

Query: 244 APRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRM 283
              + + Q    +P     G P+ GA      +  AW+ R+
Sbjct: 246 VSTVALLQD-ARQPPPYVVGEPMYGA------KPGAWTVRL 213

[Close]

BLAST of CmaCh19G004430 vs. ExPASy TrEMBL
Match: A0A6J1I3F8 (tobamovirus multiplication protein 2A-like OS=Cucurbita maxima OX=3661 GN=LOC111470643 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 5.0e-150
Identity = 279/320 (87.19%), Postives = 279/320 (87.19%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of CmaCh19G004430 vs. ExPASy TrEMBL
Match: A0A6J1GMT3 (tobamovirus multiplication protein 2A OS=Cucurbita moschata OX=3662 GN=LOC111455402 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 8.0e-148
Identity = 275/320 (85.94%), Postives = 277/320 (86.56%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNF LSLLGLAMVGYGIYLLV+YLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFLLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEII+WVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of CmaCh19G004430 vs. ExPASy TrEMBL
Match: A0A6J1EYE4 (tobamovirus multiplication protein 2A-like OS=Cucurbita moschata OX=3662 GN=LOC111437351 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.5e-143
Identity = 265/320 (82.81%), Postives = 273/320 (85.31%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLV+YLQS SD+PRPPLSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFD+LP+AWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQ+GCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQLGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEII+WVALGAVIFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPLDYDSDDEY 240

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAG LDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVA QPAEEKSRCTIM
Sbjct: 301 HRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CmaCh19G004430 vs. ExPASy TrEMBL
Match: A0A6J1K6M6 (tobamovirus multiplication protein 2A-like OS=Cucurbita maxima OX=3661 GN=LOC111491627 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.9e-142
Identity = 263/320 (82.19%), Postives = 271/320 (84.69%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLV+YLQS SD+PRPPLSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFD+LP+AWFIYLFIAVG IIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGAIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQ+GCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQLGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEII+WVALGAVIFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPVDYDSDDEY 240

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAG LDQRPSRNDAWS RMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSARMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVA QPAEEKSRCTIM
Sbjct: 301 HRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CmaCh19G004430 vs. ExPASy TrEMBL
Match: A0A5A7T8L3 (Tobamovirus multiplication protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00630 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 8.3e-137
Identity = 254/320 (79.38%), Postives = 267/320 (83.44%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLV+YLQS SD+P P LSGDHDLVQLGRP
Sbjct: 90  MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPGPSLSGDHDLVQLGRP 149

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFD+LPKAWFIYLFIA GVI+FVVSCFGCIGAATR+GCCLSC        
Sbjct: 150 MLMAVSLSSNIFDNLPKAWFIYLFIATGVIVFVVSCFGCIGAATRSGCCLSC-------- 209

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YS+L+LLLILVQ+GCAAFIFFDK+WRD
Sbjct: 210 ---------------------------------YSILLLLLILVQLGCAAFIFFDKNWRD 269

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLE+KW+II+WVALG +IFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 270 EIPGDKTGNFDKIYELLENKWKIIRWVALGTIIFEALLFLLALVVRAANRPVDYDSDDEY 329

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAG LDQRPSRNDAWS RMREKYGLDTSEFTYNPSES
Sbjct: 330 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSARMREKYGLDTSEFTYNPSES 368

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVA Q AEEKSRCTIM
Sbjct: 390 HRFQQVAPQAAEEKSRCTIM 368

[Close]

BLAST of CmaCh19G004430 vs. NCBI nr
Match: XP_022971990.1 (tobamovirus multiplication protein 2A-like [Cucurbita maxima] >XP_022971992.1 tobamovirus multiplication protein 2A-like [Cucurbita maxima])

HSP 1 Score: 540.4 bits (1391), Expect = 1.0e-149
Identity = 279/320 (87.19%), Postives = 279/320 (87.19%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of CmaCh19G004430 vs. NCBI nr
Match: XP_023553897.1 (tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 535.4 bits (1378), Expect = 3.3e-148
Identity = 276/320 (86.25%), Postives = 278/320 (86.88%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLV+YLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEII+WVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of CmaCh19G004430 vs. NCBI nr
Match: XP_022952814.1 (tobamovirus multiplication protein 2A [Cucurbita moschata])

HSP 1 Score: 533.1 bits (1372), Expect = 1.6e-147
Identity = 275/320 (85.94%), Postives = 277/320 (86.56%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNF LSLLGLAMVGYGIYLLV+YLQSPSDIPRPPLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFLLSLLGLAMVGYGIYLLVEYLQSPSDIPRPPLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQVGCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQVGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEII+WVALGAVIFEALLFLLALVVRAANSPADYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVAQQPAEEKSRCTIM
Sbjct: 301 HRFQQVAQQPAEEKSRCTIM 279

[Close]

BLAST of CmaCh19G004430 vs. NCBI nr
Match: XP_022931040.1 (tobamovirus multiplication protein 2A-like [Cucurbita moschata] >KAG7036173.1 Tobamovirus multiplication protein 2A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 517.7 bits (1332), Expect = 7.2e-143
Identity = 265/320 (82.81%), Postives = 273/320 (85.31%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLV+YLQS SD+PRPPLSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFD+LP+AWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQ+GCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQLGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGDKTGNFDKIYELLEDKWEII+WVALGAVIFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 181 EIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPLDYDSDDEY 240

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAG LDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVA QPAEEKSRCTIM
Sbjct: 301 HRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CmaCh19G004430 vs. NCBI nr
Match: XP_023533384.1 (tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.5 bits (1329), Expect = 1.6e-142
Identity = 264/320 (82.50%), Postives = 273/320 (85.31%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLV+YLQS SD+PRPPLSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPALL 120
           MLMAVSLSSNIFD+LP+AWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC        
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSC-------- 120

Query: 121 HCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWRD 180
                                            YSVLVLLLILVQ+GCAAFIFFDKHWRD
Sbjct: 121 ---------------------------------YSVLVLLLILVQLGCAAFIFFDKHWRD 180

Query: 181 EIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDEY 240
           EIPGD+TGNFDKIYELLEDKWEII+WVALGAVIFEALLFLLALVVRAAN P DYDSDDEY
Sbjct: 181 EIPGDRTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPLDYDSDDEY 240

Query: 241 IAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 300
           IAPR QIRQPLINRPVAPATGVPVAG LDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES
Sbjct: 241 IAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSES 279

Query: 301 HRFQQVAQQPAEEKSRCTIM 321
           HRFQQVA QPAEEKSRCTIM
Sbjct: 301 HRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CmaCh19G004430 vs. TAIR 10
Match: AT1G32400.1 (tobamovirus multiplication 2A )

HSP 1 Score: 392.1 bits (1006), Expect = 4.2e-109
Identity = 198/321 (61.68%), Postives = 233/321 (72.59%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQ-SPSDIPRPPLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL V+Y + + + +     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAL 120
           P+LMAVSLSSNIFD+LPKAWFIYLFI +GV +FV+SC GC+G  +R+ CCLSC       
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSC------- 120

Query: 121 LHCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWR 180
                                             YS+L++LLILV++G AAFIFFD  WR
Sbjct: 121 ----------------------------------YSLLLILLILVELGFAAFIFFDNSWR 180

Query: 181 DEIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDE 240
           DE+P D+TGNFD IY  L + W+I++WVALGAV+FEALLFLLAL+VRAAN+PA+YDSDDE
Sbjct: 181 DELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAEYDSDDE 240

Query: 241 YIAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSE 300
           Y+APR QIRQP INR  AP TGVPVA  LDQRPSR+D WS RMREKYGLDTSEFTYNPSE
Sbjct: 241 YLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 280

Query: 301 SHRFQQVAQQPAEEKSRCTIM 321
           SHRFQQ+  QP EEK RCTIM
Sbjct: 301 SHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CmaCh19G004430 vs. TAIR 10
Match: AT1G32400.2 (tobamovirus multiplication 2A )

HSP 1 Score: 392.1 bits (1006), Expect = 4.2e-109
Identity = 198/321 (61.68%), Postives = 233/321 (72.59%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQ-SPSDIPRPPLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL V+Y + + + +     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAL 120
           P+LMAVSLSSNIFD+LPKAWFIYLFI +GV +FV+SC GC+G  +R+ CCLSC       
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSC------- 120

Query: 121 LHCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWR 180
                                             YS+L++LLILV++G AAFIFFD  WR
Sbjct: 121 ----------------------------------YSLLLILLILVELGFAAFIFFDNSWR 180

Query: 181 DEIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDE 240
           DE+P D+TGNFD IY  L + W+I++WVALGAV+FEALLFLLAL+VRAAN+PA+YDSDDE
Sbjct: 181 DELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAEYDSDDE 240

Query: 241 YIAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSE 300
           Y+APR QIRQP INR  AP TGVPVA  LDQRPSR+D WS RMREKYGLDTSEFTYNPSE
Sbjct: 241 YLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 280

Query: 301 SHRFQQVAQQPAEEKSRCTIM 321
           SHRFQQ+  QP EEK RCTIM
Sbjct: 301 SHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CmaCh19G004430 vs. TAIR 10
Match: AT1G32400.3 (tobamovirus multiplication 2A )

HSP 1 Score: 392.1 bits (1006), Expect = 4.2e-109
Identity = 198/321 (61.68%), Postives = 233/321 (72.59%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQ-SPSDIPRPPLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL V+Y + + + +     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSNIFDHLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPAL 120
           P+LMAVSLSSNIFD+LPKAWFIYLFI +GV +FV+SC GC+G  +R+ CCLSC       
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSC------- 120

Query: 121 LHCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQVGCAAFIFFDKHWR 180
                                             YS+L++LLILV++G AAFIFFD  WR
Sbjct: 121 ----------------------------------YSLLLILLILVELGFAAFIFFDNSWR 180

Query: 181 DEIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVVRAANSPADYDSDDE 240
           DE+P D+TGNFD IY  L + W+I++WVALGAV+FEALLFLLAL+VRAAN+PA+YDSDDE
Sbjct: 181 DELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAEYDSDDE 240

Query: 241 YIAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTRMREKYGLDTSEFTYNPSE 300
           Y+APR QIRQP INR  AP TGVPVA  LDQRPSR+D WS RMREKYGLDTSEFTYNPSE
Sbjct: 241 YLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSEFTYNPSE 280

Query: 301 SHRFQQVAQQPAEEKSRCTIM 321
           SHRFQQ+  QP EEK RCTIM
Sbjct: 301 SHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CmaCh19G004430 vs. TAIR 10
Match: AT2G20230.1 (Tetraspanin family protein )

HSP 1 Score: 119.4 bits (298), Expect = 5.3e-27
Identity = 94/310 (30.32%), Postives = 141/310 (45.48%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQSPSDIPRPPL---SGDHDLVQLGR 62
           C   F   LK+LNF  + +G++++ Y I++L +Y +     P P     SG      +  
Sbjct: 6   CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65

Query: 63  PM------LMAVSLSSNIFDH--------LPKAWFIYLFIAVGVIIFVVSCFGCIGAATR 122
           P+      + ++ L SN  DH        LP  WFIY F+AVG+++ +V+  G I A   
Sbjct: 66  PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125

Query: 123 NGCCLSCVSYLPALLHCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMYSVLVLLLILVQ 182
           NGCCL           C+                              YS+L  LLIL++
Sbjct: 126 NGCCL-----------CF------------------------------YSILKTLLILLE 185

Query: 183 VGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIFEALLFLLALVV 242
               A+I  D+HW  ++P D TG    +   +E+  +I KWV +  V  + L  LLA+V+
Sbjct: 186 AALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVL 245

Query: 243 RAANS----PADYDSDDEYIAPRLQIRQPLINRPVAPATGVPVAGALDQRPSRNDAWSTR 292
           RA  S      D + DDE   PR +   PL+     P      AG+     S+ + WS+R
Sbjct: 246 RAMVSTPKPELDEEEDDE--NPRSRTWDPLL----GPQGNQAPAGS-----SKIENWSSR 263

[Close]

BLAST of CmaCh19G004430 vs. TAIR 10
Match: AT4G28770.1 (Tetraspanin family protein )

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-26
Identity = 91/326 (27.91%), Postives = 144/326 (44.17%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVDYLQS-PSDIP--RPPLSGDHD------ 62
           C   F  +LK+LNF  + +G++++ Y I++L  Y    P D P  +PP +   D      
Sbjct: 6   CHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFS 65

Query: 63  --LVQLGR---------PMLMAVSLSSNIFD--------HLPKAWFIYLFIAVGVIIFVV 122
             ++++             +  + L S   D         LP  WFIY F+A+G+++ +V
Sbjct: 66  NSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIV 125

Query: 123 SCFGCIGAATRNGCCLSCVSYLPALLHCYLIYELVMKQLGHQGTTCWLQDNYTVHRDKMY 182
           +  G I A   NGCCL           C+                              Y
Sbjct: 126 TIIGFIAAEAINGCCL-----------CF------------------------------Y 185

Query: 183 SVLVLLLILVQVGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIKWVALGAVIF 242
           S+L  LLI+++     FI  D+HW  ++P D TG  + +   +E+  +I KWV +  V  
Sbjct: 186 SILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAI 245

Query: 243 EALLFLLALVVRAANSP--ADYDSDDEYIAPRLQIRQPLINRPVAPATGVPVAGALDQRP 299
           + L  LLALV+RA  SP  ++ D +D++  P  + R  L+          P A       
Sbjct: 246 QLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRARDNLLG---------PQANQTSSGS 280

The following BLAST results are available for this feature:

BLAST of CmaCh19G004430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5W7	6.0e-108	61.68	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]
Q93XY5	7.5e-26	30.32	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
Q9SVU4	2.8e-25	27.91	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]
Q940P5	3.6e-20	25.98	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]

BLAST of CmaCh19G004430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3F8	5.0e-150	87.19	tobamovirus multiplication protein 2A-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GMT3	8.0e-148	85.94	tobamovirus multiplication protein 2A OS=Cucurbita moschata OX=3662 GN=LOC111455...	[more]
A0A6J1EYE4	3.5e-143	82.81	tobamovirus multiplication protein 2A-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K6M6	2.9e-142	82.19	tobamovirus multiplication protein 2A-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7T8L3	8.3e-137	79.38	Tobamovirus multiplication protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of CmaCh19G004430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971990.1	1.0e-149	87.19	tobamovirus multiplication protein 2A-like [Cucurbita maxima] >XP_022971992.1 to...	[more]
XP_023553897.1	3.3e-148	86.25	tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952814.1	1.6e-147	85.94	tobamovirus multiplication protein 2A [Cucurbita moschata]	[more]
XP_022931040.1	7.2e-143	82.81	tobamovirus multiplication protein 2A-like [Cucurbita moschata] >KAG7036173.1 To...	[more]
XP_023533384.1	1.6e-142	82.50	tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh19G004430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32400.1	4.2e-109	61.68	tobamovirus multiplication 2A	[more]
AT1G32400.2	4.2e-109	61.68	tobamovirus multiplication 2A	[more]
AT1G32400.3	4.2e-109	61.68	tobamovirus multiplication 2A	[more]
AT2G20230.1	5.3e-27	30.32	Tetraspanin family protein	[more]
AT4G28770.1	2.0e-26	27.91	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 9..116 e-value: 9.4E-11 score: 41.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..320
None	No IPR available	PANTHER	PTHR19282:SF417	TOBAMOVIRUS MULTIPLICATION PROTEIN 2A	coord: 2..293
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 2..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G004430.1	CmaCh19G004430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane