CmaCh19G004180 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G004180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	remorin-like
Location	Cma_Chr19: 5040692 .. 5042933 (+)
RNA-Seq Expression	CmaCh19G004180
Synteny	CmaCh19G004180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTTCAAGGCAACATATTTTTATTTTTTATTTTCCATATCATATCATTCTTCTAAATCTAACAACCCTCCCCTCATCTCTCTCTCTCTCTCTCTGTCTCTTTATATTTGGAAACTCATCCTCATATCTCTCAGATTCCCACTCTCCAATCCCCCATGGCTGACCAATCAACCCCGCCCTCCGATCCTCCGCCGCAGGAGCTCCCCAAAGACGTCGCTGAAGAGAAAACCGTAATTCCACCACCGCCCTCATCGGCACCAGTACCTGCGCCCACACCTGCTGAACACAAAACCGATGACTCCAAAGCTCTTGTTCTTGTTGAAAGTAAATAATTATACCTCAAACCCCTTTCTTCCTCTCTATTTCTCTGTTTTTTTTTTTTTTTTTTTTAATTCTATTATTATTATTATTTTTCAGCTCAGAGTTTATTTTTGTTTATACTCTGTTTGGTGGGGGAAAATATTTATATATATATATATGCATCTTTGATTCTGATCTCTTGTTTGGGGATTCGATTCAACTTTTATTTTACTGTGTGCCATCTATTGGGAAAGTGGAATTTTTGTTTCCTTATTCTGTTTGGTGACTGGAAAATATATCATTAATCACTTTGACCCATGATCATTCTCTTCCAATCATTTTTTATTCGAATAAAGTATACTATAAAAACTCCCTCAAATCTATGAAACCTTCAAATAGTCTCTTTAGGGCACAACCCTGAAACCCTATTAAAAGTCACGAATCTATACAATAATATGTTAGTCTCTCTTAAGCATAAACTCTTGTGGCTTTGATTTGGGCTTCTCGAAAAGTCTCTTTCCCTCCCAACCATACGAAAAAGAATTAATCATGTGTTGTTGTTATTGCAGAGGCTCCAGAAGCGGGTGAGGCAAAAAGCAGCGAGGGGTCTGTAAACAGAGGTATTCATTACATAAACCCGGTTTTGAATGACTATTTTGGTTCCTTAAAAGAGTGAGTTTGTATATGATTTTTGTTCAGATGCTGTGCTAGCCAAAGTTGCAACAGAGAAGAGGGTGTCGCTCATAAAAGCTTGGGAAGAAAGTGAAAAGTCAAAGGCTGAGAATAAGTAACCTTCTCAAGACCTTGCATCGACCTTTTATTACAGACAAATATATTATATGATTAAAAATATTTAGACTTACCATTTATCTTAAAAATATTTAGACTTACCATTTATCTTAATTATAATATTTGATCATTTATTATTAACAAATATTTTTTACTAAGCTTAACAAATATATCATATTTAACTATTTATTGTTCTTTATTTATTCTTGGCCATTTATTTGATTCTCTAAATGGTTATAAATGGAGAACCTTTACCTCATTTAAATGTGGTGATTTTAGAAAATATTCTCAATTTCCTTACAGTTGAGCTCGTTTTGCAGAGCTCACAAAAAGTTTTCTTCGGTTGTGGCTTGGGAGAATAGCAGAAAGGCTTCTGTAGAGGCTGAGTTGAAGAAGATTGAGGTATCAAAACATTCTATTTACACGAACTAAATGTTAGTTTGCTTTGCTTACGACTTCATCTCTAAAAGCTCTCGAGGAATATATATATATATATAAAATGAGAAAGAGAAGTAGAGAAGGGGGACGGAGAGTCCCACCTTTATCTATGTTCACAATATTTAGATAGGATACAGGCTATCCACTAATTCTAATCTTCACCTTTAAACGGAATAGAAGCTACCAACTAACTCCTAAAACACAAAATCTGGCCAGATAAAATATATATATATATTTTCTGGAGTGGTTTTATGTTAGAAGAGTAATTAAACAAAATTTTGAGCAGGAAAATTTGGAGAAGAAGAAGGCAGAGTACATAGAGAAAATGAAGAACAAAATTGCTCTGCTTCACAAAGAAGCAGAGGAGAAGAGGGCGATAATCGAAGCCAAGCGCGGAGAAGAGCTTCTCAAGGCAGAGGAGACGGCTGCAAAGTATCGTGCTACCGGTACTGCCCCGAAGAAGCTTCTCAGCTGCTTCTCGAGCTGAGCAACTCATCAGTTCATGTTCGTGTTCATGTTCGTGTTCATGTCATTTGGGTGTTACTTTAGATATGTGTTGTTGTTTATGGTTTGATTTGTTGGTATGATTAGTGAAGATTTGAAAAGTGCTTGTGAATATGATATTTGGAGGAACATTTGTTTGAATGTAAATCAATATTGTTATAGTCATTCTAATTTATTGCAACTCAATCAGATCTGAAATTTATTTGTTC

mRNA sequence

CAATTTTCAAGGCAACATATTTTTATTTTTTATTTTCCATATCATATCATTCTTCTAAATCTAACAACCCTCCCCTCATCTCTCTCTCTCTCTCTCTGTCTCTTTATATTTGGAAACTCATCCTCATATCTCTCAGATTCCCACTCTCCAATCCCCCATGGCTGACCAATCAACCCCGCCCTCCGATCCTCCGCCGCAGGAGCTCCCCAAAGACGTCGCTGAAGAGAAAACCGTAATTCCACCACCGCCCTCATCGGCACCAGTACCTGCGCCCACACCTGCTGAACACAAAACCGATGACTCCAAAGCTCTTGTTCTTGTTGAAAAAGCGGGTGAGGCAAAAAGCAGCGAGGGGTCTGTAAACAGAGATGCTGTGCTAGCCAAAGTTGCAACAGAGAAGAGGGTGTCGCTCATAAAAGCTTGGGAAGAAAGTGAAAAGTCAAAGGCTGAGAATAAAAAGGCTTCTGTAGAGGCTGAGTTGAAGAAGATTGAGGAAAATTTGGAGAAGAAGAAGGCAGAGTACATAGAGAAAATGAAGAACAAAATTGCTCTGCTTCACAAAGAAGCAGAGGAGAAGAGGGCGATAATCGAAGCCAAGCGCGGAGAAGAGCTTCTCAAGGCAGAGGAGACGGCTGCAAAGTATCGTGCTACCGGTACTGCCCCGAAGAAGCTTCTCAGCTGCTTCTCGAGCTGAGCAACTCATCAGTTCATGTTCGTGTTCATGTTCGTGTTCATGTCATTTGGGTGTTACTTTAGATATGTGTTGTTGTTTATGGTTTGATTTGTTGGTATGATTAGTGAAGATTTGAAAAGTGCTTGTGAATATGATATTTGGAGGAACATTTGTTTGAATGTAAATCAATATTGTTATAGTCATTCTAATTTATTGCAACTCAATCAGATCTGAAATTTATTTGTTC

Coding sequence (CDS)

ATGGCTGACCAATCAACCCCGCCCTCCGATCCTCCGCCGCAGGAGCTCCCCAAAGACGTCGCTGAAGAGAAAACCGTAATTCCACCACCGCCCTCATCGGCACCAGTACCTGCGCCCACACCTGCTGAACACAAAACCGATGACTCCAAAGCTCTTGTTCTTGTTGAAAAAGCGGGTGAGGCAAAAAGCAGCGAGGGGTCTGTAAACAGAGATGCTGTGCTAGCCAAAGTTGCAACAGAGAAGAGGGTGTCGCTCATAAAAGCTTGGGAAGAAAGTGAAAAGTCAAAGGCTGAGAATAAAAAGGCTTCTGTAGAGGCTGAGTTGAAGAAGATTGAGGAAAATTTGGAGAAGAAGAAGGCAGAGTACATAGAGAAAATGAAGAACAAAATTGCTCTGCTTCACAAAGAAGCAGAGGAGAAGAGGGCGATAATCGAAGCCAAGCGCGGAGAAGAGCTTCTCAAGGCAGAGGAGACGGCTGCAAAGTATCGTGCTACCGGTACTGCCCCGAAGAAGCTTCTCAGCTGCTTCTCGAGCTGA

Protein sequence

MADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS

Homology

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BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-45
Identity = 124/188 (65.96%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 8   PSDPPPQELPKD-VAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVE-KAGEA--KS 67
           P  P P E PK+ VA+EK ++ P      +P P   + K DDSKALV+VE KA E   + 
Sbjct: 16  PPAPGPVEAPKEVVADEKAIVAP-----ALPPPAEEKEKPDDSKALVVVETKAPEPADEK 75

Query: 68  SEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAEN---------------KKASVEAEL 127
            EGS++RDAVLA+VATEKRVSLIKAWEESEKSKAEN               KKA++EAEL
Sbjct: 76  KEGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAEL 135

Query: 128 KKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTA 177
           KK+EE LEKKKAEY EKMKNKIALLHKEAEEKRA+IEAKRGE+LLKAEE AAKYRATGTA
Sbjct: 136 KKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTA 195

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BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.9e-43
Identity = 117/187 (62.57%), Postives = 137/187 (73.26%), Query Frame = 0


Query: 8   PSDPPPQELP---KDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALV-LVEKAGEAKS 67
           P+   P E P    DVA ++  + PPP    +P+P PAE K +DSKA+V +V K  E + 
Sbjct: 18  PTPEVPVEKPAAAADVAPQEKPVAPPP---VLPSPAPAEEKQEDSKAIVPVVPKEVEEEK 77

Query: 68  SEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAE---------------NKKASVEAEL 127
            EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K E               NKKA+VEAEL
Sbjct: 78  KEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAEL 137

Query: 128 KKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTA 176
           KK+EE LEKKKAEY+E+MKNKIA +HKEAEEKRA+IEAKRGEE+LKAEE AAKYRATGTA
Sbjct: 138 KKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTA 197

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BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 107/194 (55.15%), Postives = 128/194 (65.98%), Query Frame = 0


Query: 2   ADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGE- 61
           A+   P   P P ++ KDVAEEK   PPP            E   DDSKAL +VEK  E 
Sbjct: 31  AEIPAPAPAPTPADVTKDVAEEKIQNPPP------------EQIFDDSKALTVVEKPVEE 90

Query: 62  ---AKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAEN---------------KKA 121
              AK +  S++RD  LA ++ EKR+S ++AWEESEKSKAEN               KKA
Sbjct: 91  PAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKA 150

Query: 122 SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY 177
           +VEA+LKKIEE LEKKKAEY E+MKNK+A +HKEAEE+RA+IEAKRGE++LKAEETAAKY
Sbjct: 151 AVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKY 210

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BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.9e-32
Identity = 100/189 (52.91%), Postives = 119/189 (62.96%), Query Frame = 0


Query: 7   PPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGE----AK 66
           P  +P P   P +VA+EK   PPP                 +SKAL +VEK  E     K
Sbjct: 20  PAKEPTP--APVEVADEKIHNPPPV----------------ESKALAVVEKPIEEHTPKK 79

Query: 67  SSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAEN---------------KKASVEAE 126
           +S GS +RD +LA +  EK+ S IKAWEESEKSKAEN               KKA+VEA+
Sbjct: 80  ASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQ 139

Query: 127 LKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGT 177
           L+KIEE LEKKKA+Y EKMKNK+A +HK AEEKRA++EAK+GEELLKAEE  AKYRATG 
Sbjct: 140 LRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGV 190

[Close]

BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.6e-04
Identity = 57/184 (30.98%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 3   DQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGEAK 62
           D S    D     + +D  EE   +   P S P+P+P          +A + +   G+  
Sbjct: 138 DSSRAGVDDALGRIGEDELEETNPLAIVPDSNPIPSP---------RRAHLALPAPGDVS 197

Query: 63  SSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKKASVE---------------AE 122
           S+ G    +  + +V  E+  S I AW+ +E +K  N+    E               A 
Sbjct: 198 SAGGGHGDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGDQVEKANAW 257

Query: 123 LKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGT 172
           LKK E  LE+K+A+ +EK +N++A   ++AEEKRA  EAKRG ++ +  E A   RA G 
Sbjct: 258 LKKYERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELANFMRAVGR 312

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BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A6J1I6W2 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111470544 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.1e-77
Identity = 178/196 (90.82%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 1   MADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEK--- 60
           MADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEK   
Sbjct: 1   MADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAPE 60

Query: 61  AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK---------------KA 120
           AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK               KA
Sbjct: 61  AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKFSSVVAWENSRKA 120

Query: 121 SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY 179
           SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY
Sbjct: 121 SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY 180

[Close]

BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A6J1GJE1 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.5e-74
Identity = 177/199 (88.94%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 1   MADQSTPPSD---PPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEK 60
           MADQSTPPSD   PPPQELPKDVAEEKTVIPPPP SAPVPAPTPAEHKTDDSKALVLVEK
Sbjct: 1   MADQSTPPSDPPPPPPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVEK 60

Query: 61  ---AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK-------------- 120
              AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK              
Sbjct: 61  VPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENS 120

Query: 121 -KASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 179
            KASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA
Sbjct: 121 RKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 180

[Close]

BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A1S3CPW1 (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.8e-57
Identity = 149/196 (76.02%), Postives = 156/196 (79.59%), Query Frame = 0


Query: 4   QSTPPSD---PPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGE 63
           +S PPSD   PPP+ELPKDVAEEK+VIPPPP           E KTDDSKALVLVEK  E
Sbjct: 9   ESPPPSDPPPPPPEELPKDVAEEKSVIPPPP-----------EDKTDDSKALVLVEKVPE 68

Query: 64  A---KSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAEN---------------KKA 123
               KS+EGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAEN               KKA
Sbjct: 69  VADPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVAAWENSKKA 128

Query: 124 SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY 179
           SVEAELKKIEE+LEKKK EYIEKMKNKIALLHK AEEKRAIIEAKRGE+LLKAEETAAKY
Sbjct: 129 SVEAELKKIEESLEKKKGEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKY 188

[Close]

BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A0A0LKG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915100 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.1e-56
Identity = 144/193 (74.61%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 4   QSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGEA-- 63
           +S PPSD PPQ+LPKDV EEK+VIPPPP           EHKTDDSKALVLVEK  E   
Sbjct: 9   ESPPPSD-PPQQLPKDVTEEKSVIPPPP-----------EHKTDDSKALVLVEKVPEVAD 68

Query: 64  -KSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK---------------KASVE 123
            K++EGSVNRDAVLAKVATEKR+SL+KAWEESEKSKAENK               KASVE
Sbjct: 69  PKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVE 128

Query: 124 AELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRAT 179
           A+LKKIEE+LEKKKA+YIE+MKNKIALLHK AEEKRAIIEAKRGE+LLKAEETAAKYRAT
Sbjct: 129 ADLKKIEESLEKKKAKYIEQMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRAT 188

[Close]

BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A6J1DYY5 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 150/197 (76.14%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MADQS-TPPSDPPP-QELPKDVAEEKTVIPPPPSSAPVPAPTPAEHK-TDDSKALVLVEK 60
           MA++S  P S PPP +E+PKDVAEEKTVIPPP      P P PAE K  DDSKALVLVEK
Sbjct: 1   MAEESKNPESTPPPAEEVPKDVAEEKTVIPPP------PPPPPAEDKPADDSKALVLVEK 60

Query: 61  ---AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAEN--------------- 120
              A E KS+EGSVNRD VLAKVATEKR+SLIKAWEESEKSKAEN               
Sbjct: 61  VPEAAEPKSAEGSVNRDTVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENS 120

Query: 121 KKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 177
           KKASVEAELKKIEE+LEKKKAEYIEKMKNKIALLHK AEEKRAIIEAKRGE+LLKAEETA
Sbjct: 121 KKASVEAELKKIEESLEKKKAEYIEKMKNKIALLHKTAEEKRAIIEAKRGEDLLKAEETA 180

[Close]

BLAST of CmaCh19G004180 vs. NCBI nr
Match: XP_022971850.1 (remorin-like [Cucurbita maxima])

HSP 1 Score: 296.2 bits (757), Expect = 1.9e-76
Identity = 178/196 (90.82%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 1   MADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEK--- 60
           MADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEK   
Sbjct: 1   MADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAPE 60

Query: 61  AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK---------------KA 120
           AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK               KA
Sbjct: 61  AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKFSSVVAWENSRKA 120

Query: 121 SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY 179
           SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY
Sbjct: 121 SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY 180

[Close]

BLAST of CmaCh19G004180 vs. NCBI nr
Match: XP_022952053.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 288.9 bits (738), Expect = 3.0e-74
Identity = 177/199 (88.94%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 1   MADQSTPPSD---PPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEK 60
           MADQSTPPSD   PPPQELPKDVAEEKTVIPPPP SAPVPAPTPAEHKTDDSKALVLVEK
Sbjct: 1   MADQSTPPSDPPPPPPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVEK 60

Query: 61  ---AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK-------------- 120
              AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK              
Sbjct: 61  VPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENS 120

Query: 121 -KASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 179
            KASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA
Sbjct: 121 RKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 180

[Close]

BLAST of CmaCh19G004180 vs. NCBI nr
Match: KAG7011502.1 (hypothetical protein SDJN02_26408 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.7 bits (735), Expect = 6.7e-74
Identity = 176/199 (88.44%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 1   MADQSTPPSD---PPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEK 60
           MADQSTPPSD   PPPQELPKDVAEEKTVIPPPP SAPVPAPTPAEHKTDDSKALVLVEK
Sbjct: 1   MADQSTPPSDPPPPPPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVEK 60

Query: 61  ---AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK-------------- 120
              AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK              
Sbjct: 61  VPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENS 120

Query: 121 -KASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 179
            KASVEAELK+IEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA
Sbjct: 121 RKASVEAELKRIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 180

[Close]

BLAST of CmaCh19G004180 vs. NCBI nr
Match: KAG6571806.1 (hypothetical protein SDJN03_28534, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.8 bits (730), Expect = 2.5e-73
Identity = 175/199 (87.94%), Postives = 175/199 (87.94%), Query Frame = 0


Query: 1   MADQSTPPSD---PPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEK 60
           MADQSTPPSD   PPPQELPKDV EEKTVIPPPP SAPVPAPTPAEHKTDDSKALVLVEK
Sbjct: 1   MADQSTPPSDPPPPPPQELPKDVTEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVEK 60

Query: 61  ---AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK-------------- 120
              AGE KSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENK              
Sbjct: 61  VPEAGETKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENS 120

Query: 121 -KASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 179
            KASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA
Sbjct: 121 RKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 180

[Close]

BLAST of CmaCh19G004180 vs. NCBI nr
Match: XP_023554190.1 (remorin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.3 bits (726), Expect = 7.4e-73
Identity = 174/199 (87.44%), Postives = 176/199 (88.44%), Query Frame = 0


Query: 1   MADQSTPPSD---PPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEK 60
           MADQSTPPSD   PPPQELPKDVAEEKTVIPPPP SAP PAPTPAEHKTDDSKALVLVEK
Sbjct: 1   MADQSTPPSDPPPPPPQELPKDVAEEKTVIPPPPPSAPAPAPTPAEHKTDDSKALVLVEK 60

Query: 61  ---AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAEN--------------- 120
              AGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAEN               
Sbjct: 61  VPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENS 120

Query: 121 KKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETA 179
           KKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRA+IEAKRGEELLKAEETA
Sbjct: 121 KKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAMIEAKRGEELLKAEETA 180

[Close]

BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 176.8 bits (447), Expect = 1.6e-44
Identity = 116/186 (62.37%), Postives = 135/186 (72.58%), Query Frame = 0


Query: 8   PSDPPPQELP---KDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGEAKSS 67
           P+   P E P    DVA ++  + PPP    +P+P PAE K +DSKA+V V    E +  
Sbjct: 18  PTPEVPVEKPAAAADVAPQEKPVAPPP---VLPSPAPAEEKQEDSKAIVPVVPKVEEEKK 77

Query: 68  EGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAE---------------NKKASVEAELK 127
           EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K E               NKKA+VEAELK
Sbjct: 78  EGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELK 137

Query: 128 KIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTAP 176
           K+EE LEKKKAEY+E+MKNKIA +HKEAEEKRA+IEAKRGEE+LKAEE AAKYRATGTAP
Sbjct: 138 KMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAP 197

[Close]

BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-44
Identity = 117/187 (62.57%), Postives = 137/187 (73.26%), Query Frame = 0


Query: 8   PSDPPPQELP---KDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALV-LVEKAGEAKS 67
           P+   P E P    DVA ++  + PPP    +P+P PAE K +DSKA+V +V K  E + 
Sbjct: 18  PTPEVPVEKPAAAADVAPQEKPVAPPP---VLPSPAPAEEKQEDSKAIVPVVPKEVEEEK 77

Query: 68  SEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAE---------------NKKASVEAEL 127
            EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K E               NKKA+VEAEL
Sbjct: 78  KEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAEL 137

Query: 128 KKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTA 176
           KK+EE LEKKKAEY+E+MKNKIA +HKEAEEKRA+IEAKRGEE+LKAEE AAKYRATGTA
Sbjct: 138 KKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTA 197

[Close]

BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 157.5 bits (397), Expect = 9.8e-39
Identity = 107/194 (55.15%), Postives = 128/194 (65.98%), Query Frame = 0


Query: 2   ADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGE- 61
           A+   P   P P ++ KDVAEEK   PPP            E   DDSKAL +VEK  E 
Sbjct: 31  AEIPAPAPAPTPADVTKDVAEEKIQNPPP------------EQIFDDSKALTVVEKPVEE 90

Query: 62  ---AKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAEN---------------KKA 121
              AK +  S++RD  LA ++ EKR+S ++AWEESEKSKAEN               KKA
Sbjct: 91  PAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKA 150

Query: 122 SVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKY 177
           +VEA+LKKIEE LEKKKAEY E+MKNK+A +HKEAEE+RA+IEAKRGE++LKAEETAAKY
Sbjct: 151 AVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKY 210

[Close]

BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 155.2 bits (391), Expect = 4.8e-38
Identity = 103/172 (59.88%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 22  EEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGEAKSSE--GSVNRDAVLAKVAT 81
           EE+  +  P + A  P+P   E K+DDSKA+VLV  A E    +  GSV+RDAVL ++  
Sbjct: 4   EEQKKVIMPEAVASEPSPPSKEEKSDDSKAIVLVVAAKEPTEDKKVGSVHRDAVLVRLEQ 63

Query: 82  EKRVSLIKAWEESEKSKAEN---------------KKASVEAELKKIEENLEKKKAEYIE 141
           +KR+SLIKAWEE+EKSK EN               KKASVEAELKKIEE L KKKA Y E
Sbjct: 64  DKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTE 123

Query: 142 KMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCF 177
           +MKNKIA +HKEAEEKRA+ EAKRGE++LKAEE AAKYRATGTAP KL   F
Sbjct: 124 QMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 139.4 bits (350), Expect = 2.7e-33
Identity = 100/189 (52.91%), Postives = 119/189 (62.96%), Query Frame = 0


Query: 7   PPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGE----AK 66
           P  +P P   P +VA+EK   PPP                 +SKAL +VEK  E     K
Sbjct: 20  PAKEPTP--APVEVADEKIHNPPPV----------------ESKALAVVEKPIEEHTPKK 79

Query: 67  SSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAEN---------------KKASVEAE 126
           +S GS +RD +LA +  EK+ S IKAWEESEKSKAEN               KKA+VEA+
Sbjct: 80  ASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQ 139

Query: 127 LKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGT 177
           L+KIEE LEKKKA+Y EKMKNK+A +HK AEEKRA++EAK+GEELLKAEE  AKYRATG 
Sbjct: 140 LRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGV 190

The following BLAST results are available for this feature:

BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	2.3e-45	65.96	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	2.9e-43	62.57	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	1.4e-37	55.15	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	3.9e-32	52.91	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q7XII4	2.6e-04	30.98	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]

BLAST of CmaCh19G004180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6W2	9.1e-77	90.82	remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111470544 PE=3 SV=1	[more]
A0A6J1GJE1	1.5e-74	88.94	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1	[more]
A0A1S3CPW1	2.8e-57	76.02	remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1	[more]
A0A0A0LKG1	3.1e-56	74.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915100 PE=3 SV=1	[more]
A0A6J1DYY5	1.2e-55	76.14	remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1	[more]

BLAST of CmaCh19G004180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971850.1	1.9e-76	90.82	remorin-like [Cucurbita maxima]	[more]
XP_022952053.1	3.0e-74	88.94	remorin-like [Cucurbita moschata]	[more]
KAG7011502.1	6.7e-74	88.44	hypothetical protein SDJN02_26408 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6571806.1	2.5e-73	87.94	hypothetical protein SDJN03_28534, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023554190.1	7.4e-73	87.44	remorin-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh19G004180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.2	1.6e-44	62.37	Remorin family protein	[more]
AT5G23750.1	2.0e-44	62.57	Remorin family protein	[more]
AT3G61260.1	9.8e-39	55.15	Remorin family protein	[more]
AT3G48940.1	4.8e-38	59.88	Remorin family protein	[more]
AT2G45820.1	2.7e-33	52.91	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 5..177
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 5..177
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 80..171 e-value: 1.3E-19 score: 70.0
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 18..77 e-value: 2.9E-17 score: 62.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G004180.1	CmaCh19G004180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress