CmaCh19G003280 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G003280
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Mitochondrial outer membrane porin
Location	Cma_Chr19: 3164695 .. 3164919 (-)
RNA-Seq Expression	CmaCh19G003280
Synteny	CmaCh19G003280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTACCCTGTTTTTTTATAATACCATCACTGTTGGCACCCAACATGCTCTTGATCCTCTGACCACGGTGAAGGCTCGAGTGAACAACTTTGGCAAGGCCAGTGCTCTTATCCAGCACGAGTGGCGTCCAAAGTCGTTCTTCACCGTATTTGCGGATGTAGACACCCAAACAATTGATAAGAGTGCTAAAGTTGGACTAGCTTTGGCCCTTGAGCCATGA

mRNA sequence

ATGGAAGCTACCCTGTTTTTTTATAATACCATCACTGTTGGCACCCAACATGCTCTTGATCCTCTGACCACGGTGAAGGCTCGAGTGAACAACTTTGGCAAGGCCAGTGCTCTTATCCAGCACGAGTGGCGTCCAAAGTCGTTCTTCACCGTATTTGCGGATGTAGACACCCAAACAATTGATAAGAGTGCTAAAGTTGGACTAGCTTTGGCCCTTGAGCCATGA

Coding sequence (CDS)

ATGGAAGCTACCCTGTTTTTTTATAATACCATCACTGTTGGCACCCAACATGCTCTTGATCCTCTGACCACGGTGAAGGCTCGAGTGAACAACTTTGGCAAGGCCAGTGCTCTTATCCAGCACGAGTGGCGTCCAAAGTCGTTCTTCACCGTATTTGCGGATGTAGACACCCAAACAATTGATAAGAGTGCTAAAGTTGGACTAGCTTTGGCCCTTGAGCCATGA

Protein sequence

MEATLFFYNTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGLALALEP

Homology

[Close]

BLAST of CmaCh19G003280 vs. ExPASy Swiss-Prot
Match: Q9SMX3 (Mitochondrial outer membrane protein porin 3 OS=Arabidopsis thaliana OX=3702 GN=VDAC3 PE=1 SV=3)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-24
Identity = 54/66 (81.82%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           N ITVGTQHALDPLTTVKARVNN G A+ALIQHEWRPKSFFTV  +VD++ IDKSAKVG+
Sbjct: 209 NAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGI 268

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 269 ALALKP 274

[Close]

BLAST of CmaCh19G003280 vs. ExPASy Swiss-Prot
Match: P42056 (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 3.6e-24
Identity = 50/66 (75.76%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NT+T+GTQH LDPLTTVKARVN++GKASALIQHEWRPKS FT+  +VDT+ I+KSAK+GL
Sbjct: 211 NTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIGL 270

Query: 69  ALALEP 75
           A+AL+P
Sbjct: 271 AVALKP 276

[Close]

BLAST of CmaCh19G003280 vs. ExPASy Swiss-Prot
Match: P42055 (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 6.1e-24
Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           N ITVGTQH LDPLT+VKAR+NNFGKASAL+QHEWRPKS FTV  +VDT+++DK AK GL
Sbjct: 211 NIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. ExPASy Swiss-Prot
Match: Q9SRH5 (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana OX=3702 GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 109.8 bits (273), Expect = 1.4e-23
Identity = 52/66 (78.79%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           +TITVGTQH+LDPLT+VKARVN+ G ASALIQHEW+PKSFFT+  +VDT++IDKSAKVGL
Sbjct: 211 STITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. ExPASy Swiss-Prot
Match: P42054 (Outer plastidial membrane protein porin OS=Pisum sativum OX=3888 GN=POR1 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-22
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NT T+GTQHALDPLTTVK RV N GKASALIQHEWRPKS  T+ ++VDT+ I+KSAK+GL
Sbjct: 211 NTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKSAKIGL 270

Query: 69  ALALEP 75
           +LAL+P
Sbjct: 271 SLALKP 276

[Close]

BLAST of CmaCh19G003280 vs. ExPASy TrEMBL
Match: A0A6J1I888 (mitochondrial outer membrane protein porin of 34 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111470080 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.4e-25
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTV  +VDT+ IDKSAKVGL
Sbjct: 211 NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIDKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. ExPASy TrEMBL
Match: A0A6J1ELN3 (mitochondrial outer membrane protein porin of 34 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111435543 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.4e-25
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTV  +VDT+ IDKSAKVGL
Sbjct: 211 NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIDKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. ExPASy TrEMBL
Match: A0A5D3DPS3 (Mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008270 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.9e-24
Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NTITVGTQHALDPLT+VKARVNNFGKASALIQHEWRPKSFFTV  +VDT+ I+KSAKVGL
Sbjct: 211 NTITVGTQHALDPLTSVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIEKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. ExPASy TrEMBL
Match: A0A0A0LC61 (Porin OS=Cucumis sativus OX=3659 GN=Csa_3G827370 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.9e-24
Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NTITVGTQHALDPLT+VKARVNNFGKASALIQHEWRPKSFFTV  +VDT+ I+KSAKVGL
Sbjct: 211 NTITVGTQHALDPLTSVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIEKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. ExPASy TrEMBL
Match: A0A1S3B832 (mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo OX=3656 GN=LOC103487026 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.9e-24
Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NTITVGTQHALDPLT+VKARVNNFGKASALIQHEWRPKSFFTV  +VDT+ I+KSAKVGL
Sbjct: 211 NTITVGTQHALDPLTSVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIEKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. NCBI nr
Match: XP_022928719.1 (mitochondrial outer membrane protein porin of 34 kDa-like [Cucurbita moschata] >XP_022971329.1 mitochondrial outer membrane protein porin of 34 kDa-like [Cucurbita maxima] >XP_023531639.1 mitochondrial outer membrane protein porin of 34 kDa-like [Cucurbita pepo subsp. pepo] >KAG6588388.1 hypothetical protein SDJN03_16953, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022235.1 hypothetical protein SDJN02_15965, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123.6 bits (309), Expect = 7.0e-25
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTV  +VDT+ IDKSAKVGL
Sbjct: 211 NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIDKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. NCBI nr
Match: XP_038905108.1 (mitochondrial outer membrane protein porin of 34 kDa [Benincasa hispida])

HSP 1 Score: 120.6 bits (301), Expect = 5.9e-24
Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NTITVGTQHALDPLT+VKARVNNFGKASALIQHEWRPKSFFTV  +VDT+ I+KSAKVGL
Sbjct: 211 NTITVGTQHALDPLTSVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIEKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. NCBI nr
Match: XP_008443436.1 (PREDICTED: mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo] >KAA0053740.1 mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo var. makuwa] >TYK25663.1 mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 5.9e-24
Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NTITVGTQHALDPLT+VKARVNNFGKASALIQHEWRPKSFFTV  +VDT+ I+KSAKVGL
Sbjct: 211 NTITVGTQHALDPLTSVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIEKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. NCBI nr
Match: XP_011652245.1 (mitochondrial outer membrane protein porin of 34 kDa [Cucumis sativus] >KGN59595.1 hypothetical protein Csa_002619 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 5.9e-24
Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NTITVGTQHALDPLT+VKARVNNFGKASALIQHEWRPKSFFTV  +VDT+ I+KSAKVGL
Sbjct: 211 NTITVGTQHALDPLTSVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIEKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. NCBI nr
Match: XP_020232738.1 (outer plastidial membrane protein porin [Cajanus cajan] >KYP49897.1 hypothetical protein KK1_028397 [Cajanus cajan])

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           NT+T+GTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFT+  +VDT+ IDKSAKVGL
Sbjct: 211 NTLTLGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTISGEVDTKAIDKSAKVGL 270

Query: 69  ALALEP 75
            LAL+P
Sbjct: 271 GLALKP 276

[Close]

BLAST of CmaCh19G003280 vs. TAIR 10
Match: AT5G15090.1 (voltage dependent anion channel 3 )

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25
Identity = 54/66 (81.82%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           N ITVGTQHALDPLTTVKARVNN G A+ALIQHEWRPKSFFTV  +VD++ IDKSAKVG+
Sbjct: 209 NAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGI 268

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 269 ALALKP 274

[Close]

BLAST of CmaCh19G003280 vs. TAIR 10
Match: AT5G15090.2 (voltage dependent anion channel 3 )

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25
Identity = 54/66 (81.82%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           N ITVGTQHALDPLTTVKARVNN G A+ALIQHEWRPKSFFTV  +VD++ IDKSAKVG+
Sbjct: 209 NAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGI 268

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 269 ALALKP 274

[Close]

BLAST of CmaCh19G003280 vs. TAIR 10
Match: AT3G01280.1 (voltage dependent anion channel 1 )

HSP 1 Score: 109.8 bits (273), Expect = 9.7e-25
Identity = 52/66 (78.79%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 9   NTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGL 68
           +TITVGTQH+LDPLT+VKARVN+ G ASALIQHEW+PKSFFT+  +VDT++IDKSAKVGL
Sbjct: 211 STITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGL 270

Query: 69  ALALEP 75
           ALAL+P
Sbjct: 271 ALALKP 276

[Close]

BLAST of CmaCh19G003280 vs. TAIR 10
Match: AT5G57490.1 (voltage dependent anion channel 4 )

HSP 1 Score: 74.7 bits (182), Expect = 3.5e-14
Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 7   FYNTITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKV 66
           + N+ TVG+ H++D  T VK R +N GKA  ++Q EWRPKS  T  A+ D++ +  S K+
Sbjct: 207 YNNSFTVGSSHSVDQFTVVKTRFSNSGKAGMVVQREWRPKSHITFSAEYDSKAVTSSPKL 266

Query: 67  GLALALEP 75
           GLALAL+P
Sbjct: 267 GLALALKP 274

[Close]

BLAST of CmaCh19G003280 vs. TAIR 10
Match: AT3G49920.1 (voltage dependent anion channel 5 )

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-13
Identity = 33/65 (50.77%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 10  TITVGTQHALDPLTTVKARVNNFGKASALIQHEWRPKSFFTVFADVDTQTIDKSAKVGLA 69
           T+TVG  +A+D LT VKA++N+ GK  AL+QHE  PKS  T+  ++DT+T+DK  ++GL+
Sbjct: 162 TVTVGGLYAVDHLTNVKAKLNSNGKFGALLQHEGLPKSIVTISGEIDTKTLDKYPRLGLS 221

Query: 70  LALEP 75
           L+L+P
Sbjct: 222 LSLKP 226

The following BLAST results are available for this feature:

BLAST of CmaCh19G003280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMX3	2.1e-24	81.82	Mitochondrial outer membrane protein porin 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P42056	3.6e-24	75.76	Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum OX=411...	[more]
P42055	6.1e-24	77.27	Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum OX=411...	[more]
Q9SRH5	1.4e-23	78.79	Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P42054	1.5e-22	74.24	Outer plastidial membrane protein porin OS=Pisum sativum OX=3888 GN=POR1 PE=1 SV...	[more]

BLAST of CmaCh19G003280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I888	3.4e-25	90.91	mitochondrial outer membrane protein porin of 34 kDa-like OS=Cucurbita maxima OX...	[more]
A0A6J1ELN3	3.4e-25	90.91	mitochondrial outer membrane protein porin of 34 kDa-like OS=Cucurbita moschata ...	[more]
A0A5D3DPS3	2.9e-24	87.88	Mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo var. makuwa...	[more]
A0A0A0LC61	2.9e-24	87.88	Porin OS=Cucumis sativus OX=3659 GN=Csa_3G827370 PE=3 SV=1	[more]
A0A1S3B832	2.9e-24	87.88	mitochondrial outer membrane protein porin of 34 kDa OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of CmaCh19G003280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928719.1	7.0e-25	90.91	mitochondrial outer membrane protein porin of 34 kDa-like [Cucurbita moschata] >...	[more]
XP_038905108.1	5.9e-24	87.88	mitochondrial outer membrane protein porin of 34 kDa [Benincasa hispida]	[more]
XP_008443436.1	5.9e-24	87.88	PREDICTED: mitochondrial outer membrane protein porin of 34 kDa [Cucumis melo] >...	[more]
XP_011652245.1	5.9e-24	87.88	mitochondrial outer membrane protein porin of 34 kDa [Cucumis sativus] >KGN59595...	[more]
XP_020232738.1	1.0e-23	84.85	outer plastidial membrane protein porin [Cajanus cajan] >KYP49897.1 hypothetical...	[more]

BLAST of CmaCh19G003280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15090.1	1.5e-25	81.82	voltage dependent anion channel 3	[more]
AT5G15090.2	1.5e-25	81.82	voltage dependent anion channel 3	[more]
AT3G01280.1	9.7e-25	78.79	voltage dependent anion channel 1	[more]
AT5G57490.1	3.5e-14	48.53	voltage dependent anion channel 4	[more]
AT3G49920.1	1.3e-13	50.77	voltage dependent anion channel 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027246	Eukaryotic porin/Tom40	PFAM	PF01459	Porin_3	coord: 9..67 e-value: 1.0E-13 score: 51.4
IPR023614	Porin domain superfamily	GENE3D	2.40.160.10	Porin	coord: 4..73 e-value: 1.1E-20 score: 76.0
None	No IPR available	PANTHER	PTHR11743:SF50	MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3	coord: 9..74
IPR001925	Porin, eukaryotic type	PANTHER	PTHR11743	VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL	coord: 9..74
IPR001925	Porin, eukaryotic type	PROSITE	PS00558	EUKARYOTIC_PORIN	coord: 17..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G003280.1	CmaCh19G003280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098656	anion transmembrane transport
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0015698	inorganic anion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005741	mitochondrial outer membrane
molecular_function	GO:0004650	polygalacturonase activity
molecular_function	GO:0008308	voltage-gated anion channel activity