CmaCh19G003220 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G003220
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Gag/pol protein
Location	Cma_Chr19: 3002853 .. 3004134 (-)
RNA-Seq Expression	CmaCh19G003220
Synteny	CmaCh19G003220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGGCCTCGTGTCGCCCTGGGAGCGTCCTCCATTCGGAAGGTATTTGAATGAGTCAATAACAAAGTGAATGGAGAAAGTATTTATAGTAAGTGGAAAGAGAAAGTATATCAACACGTCCTATGGTCTCCACCACTAGTTTACACTGTGAGATTCCCATGTTCTGCCTGCATGTTGCCCTAGAGCAACTACCCATTCGGAGGGTCGTAACATGGGAGTCGAAACAACGCAAACTCCAGAAATGGATAGGATTTCTTAGGTCCATTCCTAACTTTGGCTTTTTCATTCGATAGCATTGTTGGAACCGATCTATGAGGACTGAAATTTGTGGGTCACACTTGCGAAGAATTACTAAGAGTTAGTATATTCTTGACCAAAATAGCGATAACTAAAACACTATAGGAACAAGAGTTATTCTGGGATTAGTGTATAAGTCAAGAATGCCTTGGTTTAGTGAATGAGTGATTGACTACTCCTCGGTAGCAGTTACTCTAAATCACTAAAGTATCATTGCAAATTAATAACTTTTTGGGTAGATTATTACATTTACTAAAACTAATTGGATTAAACAGGATTAAGTCAAATCACTAATAGAATTTTCTTTATATCACAACATGACAAACTCAATAGTACAATTACTCGCTTCTGAGAAATTAAACGACGACAATTATGCAACTTGGAAATCAAACCTAAACACAATACTGGTAATTGATGATTTAAGGTTTGTTTTCACTGAGGAATGTCCTCCAAACCCCAGCTCAAATGCAAATCGAACAGTTCGAGATGCGTATGACAGATGGATAAAGGTAAATGACAAAGCCTACATTCTAGCCAGCATATTTGATGTTTTGGCTAAGAAACACGATGTTATGGGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCGTCCTTCTCCCTTCGACATGAAGCCATAAAATACATTTACAATTGTCGTATGAAAGAAGGGACCTCAGTTAGAGAACATGTCCTGGACATGATGGTTCATTTCAATGTGGCAGAAGAAAATGAAGTTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGGAGTCTCTTCTGAAGAGCTTCTTCCAGTTCCGCACAAATGTGGTGATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAGTCCCTCTTAACGAACAAGGGACATACAGGAGAAGAAAATATTGCTATCTCCAAGAAATTACAACGAGAATCGTCCTCCAAAAAAAAAGTATGA

mRNA sequence

ATGCTCGGCCTCGTGTCGCCCTGGGAGCGTCCTCCATTCGGAAGGTTTGTTTTCACTGAGGAATGTCCTCCAAACCCCAGCTCAAATGCAAATCGAACAGTTCGAGATGCGTATGACAGATGGATAAAGGTAAATGACAAAGCCTACATTCTAGCCAGCATATTTGATGTTTTGGCTAAGAAACACGATGTTATGGGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCGTCCTTCTCCCTTCGACATGAAGCCATAAAATACATTTACAATTGTCGTATGAAAGAAGGGACCTCAGTTAGAGAACATGTCCTGGACATGATGGTTCATTTCAATGTGGCAGAAGAAAATGAAGTTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGGAGTCTCTTCTGAAGAGCTTCTTCCAGTTCCGCACAAATGTGGTGATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAGTCCCTCTTAACGAACAAGGGACATACAGGAGAAGAAAATATTGCTATCTCCAAGAAATTACAACGAGAATCGTCCTCCAAAAAAAAAGTATGA

Coding sequence (CDS)

ATGCTCGGCCTCGTGTCGCCCTGGGAGCGTCCTCCATTCGGAAGGTTTGTTTTCACTGAGGAATGTCCTCCAAACCCCAGCTCAAATGCAAATCGAACAGTTCGAGATGCGTATGACAGATGGATAAAGGTAAATGACAAAGCCTACATTCTAGCCAGCATATTTGATGTTTTGGCTAAGAAACACGATGTTATGGGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCGTCCTTCTCCCTTCGACATGAAGCCATAAAATACATTTACAATTGTCGTATGAAAGAAGGGACCTCAGTTAGAGAACATGTCCTGGACATGATGGTTCATTTCAATGTGGCAGAAGAAAATGAAGTTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGGAGTCTCTTCTGAAGAGCTTCTTCCAGTTCCGCACAAATGTGGTGATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAGTCCCTCTTAACGAACAAGGGACATACAGGAGAAGAAAATATTGCTATCTCCAAGAAATTACAACGAGAATCGTCCTCCAAAAAAAAAGTATGA

Protein sequence

MLGLVSPWERPPFGRFVFTEECPPNPSSNANRTVRDAYDRWIKVNDKAYILASIFDVLAKKHDVMGTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQVSFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISKKLQRESSSKKKV

Homology

[Close]

BLAST of CmaCh19G003220 vs. ExPASy TrEMBL
Match: A0A6J1DWG6 (uncharacterized protein LOC111025021 OS=Momordica charantia OX=3673 GN=LOC111025021 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 7.1e-62
Identity = 120/177 (67.80%), Postives = 148/177 (83.62%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDKA--YILASIFDVLAKKHDVMGTAKEIM 74
           RFV TEECPP P+ NANRTVRDAYDRW+K N+KA  YILASI +VL+KKH+ + T +EIM
Sbjct: 42  RFVLTEECPPAPAPNANRTVRDAYDRWVKANEKARVYILASISEVLSKKHERLATTREIM 101

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           +SL+ +FGQPS +L H+A+KY+YNCRMKEG+SVREHVL+MMVHFNVAE N+ V++E SQV
Sbjct: 102 DSLQALFGQPSTTLMHDAVKYVYNCRMKEGSSVREHVLNMMVHFNVAEVNDTVMNEISQV 161

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISKK 190
            FIM+SL KS+FQF+ N +MNKIEY+LT LLNELQ Y+SLL NKG   E N+A + K
Sbjct: 162 GFIMQSLPKSYFQFKINAMMNKIEYSLTTLLNELQLYESLLKNKGFEAEANVATTSK 218

[Close]

BLAST of CmaCh19G003220 vs. ExPASy TrEMBL
Match: A0A5A7TWX1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001820 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.9e-61
Identity = 130/189 (68.78%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDKA--YILASIFDVLAKKHDVMGTAKEIM 74
           RFV TEECP  P+SNANRT R+AYDRWIK N+KA  YILAS+ DVLAKKH+ + TAKEIM
Sbjct: 36  RFVLTEECPQTPASNANRTSREAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIM 95

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           +SLKGMFGQP +SLRH+AIKYIY  RMKEGTS+REHVL MM+HFN+AE N   IDE +QV
Sbjct: 96  DSLKGMFGQPKWSLRHKAIKYIYTKRMKEGTSIREHVLYMMIHFNIAEVNGGAIDEANQV 155

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISK-KLQ 194
           SFI+ESL KSF  F+TNV +NKIE+NLT LLNELQ +Q+L   K    E NIA +K K  
Sbjct: 156 SFILESLPKSFIPFQTNVSLNKIEFNLTTLLNELQRFQNLTMGKAKEMEANIATTKGKFS 215

Query: 195 RESSSKKKV 201
           R SSSK KV
Sbjct: 216 RGSSSKSKV 224

[Close]

BLAST of CmaCh19G003220 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.9e-60
Identity = 129/189 (68.25%), Postives = 152/189 (80.42%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDKA--YILASIFDVLAKKHDVMGTAKEIM 74
           RFV TEECP  P+ NANRTVR+AYDRW+K NDKA  YILAS+ DVLAKKHD + TAK IM
Sbjct: 36  RFVLTEECPQAPALNANRTVREAYDRWVKANDKARVYILASMTDVLAKKHDSIATAKGIM 95

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           +SL+ MFGQPS+SLRHEAIK+IY  RMKEGTSVREHVLDMM+HFN+AE N   IDE +QV
Sbjct: 96  DSLREMFGQPSWSLRHEAIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQV 155

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISK-KLQ 194
           SFI++SL KSF  F+TN  +NKIE+NLT LLNELQ +Q+L  +KG   E N+A++K K  
Sbjct: 156 SFILQSLPKSFVPFQTNASLNKIEFNLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFI 215

Query: 195 RESSSKKKV 201
           R SSSK KV
Sbjct: 216 RGSSSKNKV 224

[Close]

BLAST of CmaCh19G003220 vs. ExPASy TrEMBL
Match: A0A5D3BPM3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold128G00170 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.1e-59
Identity = 127/188 (67.55%), Postives = 147/188 (78.19%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDK--AYILASIFDVLAKKHDVMGTAKEIM 74
           RFV TEECP  P+SNANR  + AYDRWIK N K   YILAS+ DVLAKKH+ + T KEI+
Sbjct: 36  RFVLTEECPQTPASNANRASQKAYDRWIKANGKVCVYILASMSDVLAKKHESLATTKEIV 95

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           +SLKGMFGQP +SLRHEAIKYIY  RMKEGTSVREHVLDMM+HFN+AE N  VIDE  QV
Sbjct: 96  DSLKGMFGQPDWSLRHEAIKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGVIDEAKQV 155

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISK-KLQ 194
           SFI+ESLLKSF  F+TN  +NKIE+NLT LLNELQ +Q+L   KG   E N+A +K K +
Sbjct: 156 SFILESLLKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTKGKGKEVEANVATTKGKFK 215

Query: 195 RESSSKKK 200
           R SSS+ K
Sbjct: 216 RGSSSRSK 223

[Close]

BLAST of CmaCh19G003220 vs. ExPASy TrEMBL
Match: A0A5A7T0E9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00680 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.5e-59
Identity = 125/188 (66.49%), Postives = 148/188 (78.72%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDKA--YILASIFDVLAKKHDVMGTAKEIM 74
           RF+ TEECP  P+SNANR  R+AYDRWIK N+KA  YILAS+ DVLAKKH+ + T KEI+
Sbjct: 36  RFILTEECPQTPTSNANRASREAYDRWIKANEKARVYILASMSDVLAKKHECLATTKEIV 95

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           +SLKGMFGQP +SLRHEAIKYIY  RMK+GTSVREHVLDMM+HFN+ E N   IDE +QV
Sbjct: 96  DSLKGMFGQPEWSLRHEAIKYIYTKRMKKGTSVREHVLDMMMHFNITEVNGGAIDEANQV 155

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISK-KLQ 194
           SFI+ESLLKSF  F+TN  +NKIE+NLT LLNELQ +Q+L   KG   E N+A +K K +
Sbjct: 156 SFILESLLKSFIPFQTNASLNKIEFNLTTLLNELQHFQNLTKGKGKEVEANVATTKGKFK 215

Query: 195 RESSSKKK 200
           R S SK K
Sbjct: 216 RGSFSKSK 223

[Close]

BLAST of CmaCh19G003220 vs. NCBI nr
Match: XP_022158568.1 (uncharacterized protein LOC111025021 [Momordica charantia])

HSP 1 Score: 246.9 bits (629), Expect = 1.5e-61
Identity = 120/177 (67.80%), Postives = 148/177 (83.62%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDKA--YILASIFDVLAKKHDVMGTAKEIM 74
           RFV TEECPP P+ NANRTVRDAYDRW+K N+KA  YILASI +VL+KKH+ + T +EIM
Sbjct: 42  RFVLTEECPPAPAPNANRTVRDAYDRWVKANEKARVYILASISEVLSKKHERLATTREIM 101

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           +SL+ +FGQPS +L H+A+KY+YNCRMKEG+SVREHVL+MMVHFNVAE N+ V++E SQV
Sbjct: 102 DSLQALFGQPSTTLMHDAVKYVYNCRMKEGSSVREHVLNMMVHFNVAEVNDTVMNEISQV 161

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISKK 190
            FIM+SL KS+FQF+ N +MNKIEY+LT LLNELQ Y+SLL NKG   E N+A + K
Sbjct: 162 GFIMQSLPKSYFQFKINAMMNKIEYSLTTLLNELQLYESLLKNKGFEAEANVATTSK 218

[Close]

BLAST of CmaCh19G003220 vs. NCBI nr
Match: XP_038885834.1 (uncharacterized protein LOC120076130 [Benincasa hispida])

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-61
Identity = 122/154 (79.22%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDK--AYILASIFDVLAKKHDVMGTAKEIM 74
           +F+ TEECPP PSSNANRTVRDAY+RWI+VNDK  AYILA+I DVLAKKH+ MGT K+IM
Sbjct: 36  QFILTEECPPIPSSNANRTVRDAYNRWIRVNDKVHAYILANISDVLAKKHESMGTTKKIM 95

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           E L+GMFGQPSFSLRH++IKYIYNC MKEG SVREHVL+MMVHFNVAE NEVV+DEKSQ+
Sbjct: 96  EFLRGMFGQPSFSLRHDSIKYIYNCSMKEGASVREHVLNMMVHFNVAEVNEVVVDEKSQI 155

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNEL 167
            FI+ESL KSF QF TN +MNKIEYNLT LLNEL
Sbjct: 156 GFILESLPKSFLQFCTNALMNKIEYNLTTLLNEL 189

[Close]

BLAST of CmaCh19G003220 vs. NCBI nr
Match: KAA0048103.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-60
Identity = 130/189 (68.78%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDKA--YILASIFDVLAKKHDVMGTAKEIM 74
           RFV TEECP  P+SNANRT R+AYDRWIK N+KA  YILAS+ DVLAKKH+ + TAKEIM
Sbjct: 36  RFVLTEECPQTPASNANRTSREAYDRWIKANEKARVYILASMSDVLAKKHESLATAKEIM 95

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           +SLKGMFGQP +SLRH+AIKYIY  RMKEGTS+REHVL MM+HFN+AE N   IDE +QV
Sbjct: 96  DSLKGMFGQPKWSLRHKAIKYIYTKRMKEGTSIREHVLYMMIHFNIAEVNGGAIDEANQV 155

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISK-KLQ 194
           SFI+ESL KSF  F+TNV +NKIE+NLT LLNELQ +Q+L   K    E NIA +K K  
Sbjct: 156 SFILESLPKSFIPFQTNVSLNKIEFNLTTLLNELQRFQNLTMGKAKEMEANIATTKGKFS 215

Query: 195 RESSSKKKV 201
           R SSSK KV
Sbjct: 216 RGSSSKSKV 224

[Close]

BLAST of CmaCh19G003220 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 241.1 bits (614), Expect = 8.1e-60
Identity = 129/189 (68.25%), Postives = 152/189 (80.42%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDKA--YILASIFDVLAKKHDVMGTAKEIM 74
           RFV TEECP  P+ NANRTVR+AYDRW+K NDKA  YILAS+ DVLAKKHD + TAK IM
Sbjct: 36  RFVLTEECPQAPALNANRTVREAYDRWVKANDKARVYILASMTDVLAKKHDSIATAKGIM 95

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           +SL+ MFGQPS+SLRHEAIK+IY  RMKEGTSVREHVLDMM+HFN+AE N   IDE +QV
Sbjct: 96  DSLREMFGQPSWSLRHEAIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQV 155

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISK-KLQ 194
           SFI++SL KSF  F+TN  +NKIE+NLT LLNELQ +Q+L  +KG   E N+A++K K  
Sbjct: 156 SFILQSLPKSFVPFQTNASLNKIEFNLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFI 215

Query: 195 RESSSKKKV 201
           R SSSK KV
Sbjct: 216 RGSSSKNKV 224

[Close]

BLAST of CmaCh19G003220 vs. NCBI nr
Match: TYK01653.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 239.6 bits (610), Expect = 2.4e-59
Identity = 127/188 (67.55%), Postives = 147/188 (78.19%), Query Frame = 0


Query: 15  RFVFTEECPPNPSSNANRTVRDAYDRWIKVNDK--AYILASIFDVLAKKHDVMGTAKEIM 74
           RFV TEECP  P+SNANR  + AYDRWIK N K   YILAS+ DVLAKKH+ + T KEI+
Sbjct: 36  RFVLTEECPQTPASNANRASQKAYDRWIKANGKVCVYILASMSDVLAKKHESLATTKEIV 95

Query: 75  ESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEVVIDEKSQV 134
           +SLKGMFGQP +SLRHEAIKYIY  RMKEGTSVREHVLDMM+HFN+AE N  VIDE  QV
Sbjct: 96  DSLKGMFGQPDWSLRHEAIKYIYTKRMKEGTSVREHVLDMMMHFNIAEVNGGVIDEAKQV 155

Query: 135 SFIMESLLKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGHTGEENIAISK-KLQ 194
           SFI+ESLLKSF  F+TN  +NKIE+NLT LLNELQ +Q+L   KG   E N+A +K K +
Sbjct: 156 SFILESLLKSFIPFQTNASLNKIEFNLTTLLNELQRFQNLTKGKGKEVEANVATTKGKFK 215

Query: 195 RESSSKKK 200
           R SSS+ K
Sbjct: 216 RGSSSRSK 223

The following BLAST results are available for this feature:

BLAST of CmaCh19G003220 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh19G003220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWG6	7.1e-62	67.80	uncharacterized protein LOC111025021 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A5A7TWX1	7.9e-61	68.78	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G0018...	[more]
E2GK51	3.9e-60	68.25	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]
A0A5D3BPM3	1.1e-59	67.55	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold128G0017...	[more]
A0A5A7T0E9	1.5e-59	66.49	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G0068...	[more]

BLAST of CmaCh19G003220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158568.1	1.5e-61	67.80	uncharacterized protein LOC111025021 [Momordica charantia]	[more]
XP_038885834.1	1.9e-61	79.22	uncharacterized protein LOC120076130 [Benincasa hispida]	[more]
KAA0048103.1	1.6e-60	68.78	gag/pol protein [Cucumis melo var. makuwa]	[more]
ADJ18449.1	8.1e-60	68.25	gag/pol protein, partial [Bryonia dioica]	[more]
TYK01653.1	2.4e-59	67.55	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of CmaCh19G003220 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 47..169 e-value: 1.2E-12 score: 47.8
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 31..199
None	No IPR available	PANTHER	PTHR35317:SF8	POLYPROTEIN-LIKE PROTEIN	coord: 31..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G003220.1	CmaCh19G003220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding