CmaCh19G002670 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G002670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	chaperone protein dnaJ 20, chloroplastic-like
Location	Cma_Chr19: 1910701 .. 1911195 (-)
RNA-Seq Expression	CmaCh19G002670
Synteny	CmaCh19G002670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCTTCACCAAATTCTTCTCCAAACCGAGTGGCTTTCTTCACCCCGATGGTGAGCAATCCGACCAGGCCGATGGTGGGCTTGTCCTGCAAGGCTGCTACCACCAAAGGGCCTGATTATTACAAATTGCTGTCGGTGAGTAGCGGCTGCAATGCAAGCGGTGAAGAGATCAAGAGGGCTTATAGAGCCATGGCTTTGCAGTATCATCCTGACCTGGTTTGTGATCCTTTGCTCAAAGAGCAGTCTACCAAGATGTTTGTTCAGCTCAATGCGGCTTACAAGACGCTCTCAGATCCTGTTCTTAGAAGACAATATGATGACTCTATGATGGGTTTGAATAATGGGTATTCCTATGAGAGAAGAGGCTTTGAGGTGGATAGAACCGTGTGGCAAAGGCAGATTCTTGAGCTCAAGCGTCGGTCTGCATGTCAAAGGGATCGGTCGGTGTCGTGGGGCGGGAGAATGCGGGCTCGGAATTACTCGGAATGTTAA

mRNA sequence

ATGTTTTCTTCACCAAATTCTTCTCCAAACCGAGTGGCTTTCTTCACCCCGATGGTGAGCAATCCGACCAGGCCGATGGTGGGCTTGTCCTGCAAGGCTGCTACCACCAAAGGGCCTGATTATTACAAATTGCTGTCGGTGAGTAGCGGCTGCAATGCAAGCGGTGAAGAGATCAAGAGGGCTTATAGAGCCATGGCTTTGCAGTATCATCCTGACCTGGTTTGTGATCCTTTGCTCAAAGAGCAGTCTACCAAGATGTTTGTTCAGCTCAATGCGGCTTACAAGACGCTCTCAGATCCTGTTCTTAGAAGACAATATGATGACTCTATGATGGGTTTGAATAATGGGTATTCCTATGAGAGAAGAGGCTTTGAGGTGGATAGAACCGTGTGGCAAAGGCAGATTCTTGAGCTCAAGCGTCGGTCTGCATGTCAAAGGGATCGGTCGGTGTCGTGGGGCGGGAGAATGCGGGCTCGGAATTACTCGGAATGTTAA

Coding sequence (CDS)

ATGTTTTCTTCACCAAATTCTTCTCCAAACCGAGTGGCTTTCTTCACCCCGATGGTGAGCAATCCGACCAGGCCGATGGTGGGCTTGTCCTGCAAGGCTGCTACCACCAAAGGGCCTGATTATTACAAATTGCTGTCGGTGAGTAGCGGCTGCAATGCAAGCGGTGAAGAGATCAAGAGGGCTTATAGAGCCATGGCTTTGCAGTATCATCCTGACCTGGTTTGTGATCCTTTGCTCAAAGAGCAGTCTACCAAGATGTTTGTTCAGCTCAATGCGGCTTACAAGACGCTCTCAGATCCTGTTCTTAGAAGACAATATGATGACTCTATGATGGGTTTGAATAATGGGTATTCCTATGAGAGAAGAGGCTTTGAGGTGGATAGAACCGTGTGGCAAAGGCAGATTCTTGAGCTCAAGCGTCGGTCTGCATGTCAAAGGGATCGGTCGGTGTCGTGGGGCGGGAGAATGCGGGCTCGGAATTACTCGGAATGTTAA

Protein sequence

MFSSPNSSPNRVAFFTPMVSNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILELKRRSACQRDRSVSWGGRMRARNYSEC

Homology

[Close]

BLAST of CmaCh19G002670 vs. ExPASy Swiss-Prot
Match: Q9SDN0 (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11
Identity = 55/165 (33.33%), Postives = 83/165 (50.30%), Query Frame = 0


Query: 5   PNSSPNRVAFFTPMVSNPTRPMVGLSCKAATTKGPD--YYKLLSVSSGCNASGEEIKRAY 64
           P S P  +++ T    + TR    L+      +  D  +Y LL V+   + +  EIK+AY
Sbjct: 29  PTSIPTTISYPTRTRFSSTRIQSRLTHDDPVKQSEDLSFYDLLGVTE--SVTLPEIKQAY 88

Query: 65  RAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSDPVLRRQYD-DSMMGLNNGYSYER 124
           + +A +YHPD V  P   E+ T  F+++  AY+TLSDP  R  YD D  MG +  +S  R
Sbjct: 89  KQLARKYHPD-VSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRR 148

Query: 125 RGFEVDRTV---------WQRQILELKRRSACQRDRSVSWGGRMR 158
           +       V         WQ Q+  L+RRS  + + ++SW  RMR
Sbjct: 149 QNRYDQEVVEEKSEWKAKWQTQLSGLRRRSNQKDNNTMSWAARMR 190

[Close]

BLAST of CmaCh19G002670 vs. ExPASy Swiss-Prot
Match: Q5U458 (DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-10
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 40  DYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSD 99
           DYY LL+V     AS EE+K AYR + + YHPD   DP LK Q+ ++F  ++ AY+ LSD
Sbjct: 14  DYYSLLNVRR--EASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSD 73

Query: 100 PVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILELKRRSA 144
           P  R  YD           Y +RG E++   W  +++E KR  A
Sbjct: 74  PQTRAIYD----------IYGKRGLEMEG--W--EVVERKRTPA 101

[Close]

BLAST of CmaCh19G002670 vs. ExPASy Swiss-Prot
Match: A4XKA5 (Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-10
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 40  DYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSD 99
           DYY++L V    NA+ EEIKRAYR +A QYHPD   +P  KE   K F ++N AY+ LSD
Sbjct: 6   DYYEILGVPR--NATQEEIKRAYRRLAKQYHPD--ANPGNKEAEEK-FKEINEAYEVLSD 65

Query: 100 PVLRRQYD 108
           P  RR+YD
Sbjct: 66  PEKRRKYD 68

[Close]

BLAST of CmaCh19G002670 vs. ExPASy Swiss-Prot
Match: Q9NVH1 (DnaJ homolog subfamily C member 11 OS=Homo sapiens OX=9606 GN=DNAJC11 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 6.5e-10
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 40  DYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSD 99
           DYY LL+V     AS EE+K AYR + + YHPD   DP LK Q+ ++F  ++ AY+ LSD
Sbjct: 14  DYYSLLNVRR--EASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSD 73

Query: 100 PVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILELKRRSA 144
           P  R  YD           Y +RG E++   W  +++E +R  A
Sbjct: 74  PQTRAIYD----------IYGKRGLEMEG--W--EVVERRRTPA 101

[Close]

BLAST of CmaCh19G002670 vs. ExPASy Swiss-Prot
Match: Q5RC70 (DnaJ homolog subfamily C member 11 OS=Pongo abelii OX=9601 GN=DNAJC11 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.5e-10
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 40  DYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSD 99
           DYY LL+V     AS EE+K AYR + + YHPD   DP LK Q+ ++F  ++ AY+ LSD
Sbjct: 14  DYYSLLNVRR--EASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVLSD 73

Query: 100 PVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILELKRRSA 144
           P  R  YD           Y +RG E++   W  +++E +R  A
Sbjct: 74  PQTRAIYD----------IYGKRGLEMEG--W--EVVERRRTPA 101

[Close]

BLAST of CmaCh19G002670 vs. ExPASy TrEMBL
Match: A0A6J1HXC8 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467103 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 18  MVSNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP 77
           MVSNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP
Sbjct: 1   MVSNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP 60

Query: 78  LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILE 137
           LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILE
Sbjct: 61  LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILE 120

Query: 138 LKRRSACQRDRSVSWGGRMRARNYSEC 165
           LKRRSACQRDRSVSWGGRMRARNYSEC
Sbjct: 121 LKRRSACQRDRSVSWGGRMRARNYSEC 147

[Close]

BLAST of CmaCh19G002670 vs. ExPASy TrEMBL
Match: A0A6J1HH09 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111463967 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0


Query: 18  MVSNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP 77
           MV  PTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP
Sbjct: 1   MVGTPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP 60

Query: 78  LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILE 137
           LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYER GFEVDRTVWQRQILE
Sbjct: 61  LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERGGFEVDRTVWQRQILE 120

Query: 138 LKRRSACQRDRSVSWGGRMRARNYSEC 165
           LKRRSACQRDRSVSWGGRMRARNYSEC
Sbjct: 121 LKRRSACQRDRSVSWGGRMRARNYSEC 147

[Close]

BLAST of CmaCh19G002670 vs. ExPASy TrEMBL
Match: A0A0A0K7A4 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G061190 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 5.0e-45
Identity = 108/172 (62.79%), Postives = 128/172 (74.42%), Query Frame = 0


Query: 1   MFSSPNSSPNRVAF-FTPMVSNP-----TRPMVGLSCKAATTKGPDYYKLLSVSSGCNAS 60
           MF+SPNSS   ++  F    + P     +R    +SCKA+ T+  DYYKLLSVS GCNAS
Sbjct: 1   MFASPNSSSTSLSLSFLSKTTPPSHQAASRGRFCVSCKASATRERDYYKLLSVSGGCNAS 60

Query: 61  GEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLN 120
            EEIK+AYRAMAL+YHPDLVCDPLLKEQST+MFVQLNAAYKTLSDPVLRRQYDDS   LN
Sbjct: 61  PEEIKKAYRAMALRYHPDLVCDPLLKEQSTRMFVQLNAAYKTLSDPVLRRQYDDS---LN 120

Query: 121 NGYSYERRGFEVDRTVWQRQILELKRRSACQRDRS--VSWGGRMRARNYSEC 165
            G++   +GF  D  VW+RQILELKRRS+ ++DRS   SW  RM+A  +S C
Sbjct: 121 MGFN--TKGFRGDSAVWERQILELKRRSSQRKDRSAPASWAARMQA--HSRC 165

[Close]

BLAST of CmaCh19G002670 vs. ExPASy TrEMBL
Match: A0A6J1EIE4 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434524 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.5e-45
Identity = 105/164 (64.02%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 1   MFSSPNSSPNRVAFFTPMVS--NPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEI 60
           MFSSPN S  R AF +P+ S    TRP++ +SC     KG DYY LLSVS GC+AS E+I
Sbjct: 1   MFSSPNPS-LRAAFCSPISSRNKTTRPVMSVSC-----KGTDYYTLLSVSDGCHASNEDI 60

Query: 61  KRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYS 120
           K+AYRA ALQYHPDLVCDP LK++ T+MFVQLNAAYKTLSDPVLRR+YDDS+MGL   + 
Sbjct: 61  KKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHH 120

Query: 121 YERRGFEVD-RTVWQRQILELKRRSACQRDRSV-SWGGRMRARN 161
               GF+ D R +WQRQILEL RRS  +R+ S+ SWGGRMRA+N
Sbjct: 121 GTSTGFKGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 158

[Close]

BLAST of CmaCh19G002670 vs. ExPASy TrEMBL
Match: A0A6J1JPJ3 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486574 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43
Identity = 102/168 (60.71%), Postives = 124/168 (73.81%), Query Frame = 0


Query: 1   MFSSPNSSPNRVAFFTPMVS--NPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEI 60
           MFS PN S  R  F +P+ S    TRP++ +SC     KG DYY LLSVS GC+AS E+I
Sbjct: 1   MFSPPNPS-LRAGFCSPLSSQNKTTRPVMSVSC-----KGTDYYTLLSVSDGCHASNEDI 60

Query: 61  KRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYS 120
           K+AYR  ALQYHPDLVCDP LK++ T+MFVQLNAAYKTLSDPVLRR+YDDS+MGL   + 
Sbjct: 61  KKAYRTKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHH 120

Query: 121 YERRGFEVD-RTVWQRQILELKRRSACQRDRSV-SWGGRMRARNYSEC 165
               GF+ D R +WQRQILEL +RS  +R+ S+ SWGGRMRA+N  +C
Sbjct: 121 GTSTGFKGDYRDLWQRQILELNQRSNLRRNWSLSSWGGRMRAQNRWKC 162

[Close]

BLAST of CmaCh19G002670 vs. NCBI nr
Match: XP_022967659.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 302.4 bits (773), Expect = 2.4e-78
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 18  MVSNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP 77
           MVSNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP
Sbjct: 1   MVSNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP 60

Query: 78  LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILE 137
           LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILE
Sbjct: 61  LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILE 120

Query: 138 LKRRSACQRDRSVSWGGRMRARNYSEC 165
           LKRRSACQRDRSVSWGGRMRARNYSEC
Sbjct: 121 LKRRSACQRDRSVSWGGRMRARNYSEC 147

[Close]

BLAST of CmaCh19G002670 vs. NCBI nr
Match: XP_022963776.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata] >XP_023511548.1 chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6571688.1 Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011414.1 Chaperone protein dnaJ 20, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 0


Query: 18  MVSNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP 77
           MV  PTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP
Sbjct: 1   MVGTPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDP 60

Query: 78  LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERRGFEVDRTVWQRQILE 137
           LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYER GFEVDRTVWQRQILE
Sbjct: 61  LLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYSYERGGFEVDRTVWQRQILE 120

Query: 138 LKRRSACQRDRSVSWGGRMRARNYSEC 165
           LKRRSACQRDRSVSWGGRMRARNYSEC
Sbjct: 121 LKRRSACQRDRSVSWGGRMRARNYSEC 147

[Close]

BLAST of CmaCh19G002670 vs. NCBI nr
Match: XP_038888723.1 (dnaJ homolog subfamily A member 3, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 218.8 bits (556), Expect = 3.5e-53
Identity = 118/173 (68.21%), Postives = 133/173 (76.88%), Query Frame = 0


Query: 1   MFSSPNSSPNRVAFFTPMVSNPTRPMVGL-----SCKAATT----KGPDYYKLLSVSSGC 60
           MF+SPNSS N +A F P  +  T P   +     SCKAA      K  DYYKLLSVS GC
Sbjct: 1   MFASPNSSSNSLALFFPSKTITTAPPTAMAACRFSCKAAAVAAAPKERDYYKLLSVSGGC 60

Query: 61  NASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMM 120
           NAS EEIK+AYRAMALQYHPDLVCDPLLKEQST++FVQLNAAYKTLSDPVLRRQYD S+M
Sbjct: 61  NASNEEIKKAYRAMALQYHPDLVCDPLLKEQSTRIFVQLNAAYKTLSDPVLRRQYDASLM 120

Query: 121 GL-NNGYSYERRGFEVDRTVWQRQILELKRRSACQRDRS--VSWGGRMRARNY 162
           G  NNG+S  RRGF+ D TVWQRQ+LELKRRSA +RDRS   SWG  M+AR++
Sbjct: 121 GFNNNGFSNGRRGFQADTTVWQRQLLELKRRSALRRDRSAKASWGATMQARSF 173

[Close]

BLAST of CmaCh19G002670 vs. NCBI nr
Match: XP_004136866.1 (chaperone protein dnaJ 20, chloroplastic [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-44
Identity = 108/172 (62.79%), Postives = 128/172 (74.42%), Query Frame = 0


Query: 1   MFSSPNSSPNRVAF-FTPMVSNP-----TRPMVGLSCKAATTKGPDYYKLLSVSSGCNAS 60
           MF+SPNSS   ++  F    + P     +R    +SCKA+ T+  DYYKLLSVS GCNAS
Sbjct: 1   MFASPNSSSTSLSLSFLSKTTPPSHQAASRGRFCVSCKASATRERDYYKLLSVSGGCNAS 60

Query: 61  GEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLN 120
            EEIK+AYRAMAL+YHPDLVCDPLLKEQST+MFVQLNAAYKTLSDPVLRRQYDDS   LN
Sbjct: 61  PEEIKKAYRAMALRYHPDLVCDPLLKEQSTRMFVQLNAAYKTLSDPVLRRQYDDS---LN 120

Query: 121 NGYSYERRGFEVDRTVWQRQILELKRRSACQRDRS--VSWGGRMRARNYSEC 165
            G++   +GF  D  VW+RQILELKRRS+ ++DRS   SW  RM+A  +S C
Sbjct: 121 MGFN--TKGFRGDSAVWERQILELKRRSSQRKDRSAPASWAARMQA--HSRC 165

[Close]

BLAST of CmaCh19G002670 vs. NCBI nr
Match: XP_022927706.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-44
Identity = 105/164 (64.02%), Postives = 125/164 (76.22%), Query Frame = 0


Query: 1   MFSSPNSSPNRVAFFTPMVS--NPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEI 60
           MFSSPN S  R AF +P+ S    TRP++ +SC     KG DYY LLSVS GC+AS E+I
Sbjct: 1   MFSSPNPS-LRAAFCSPISSRNKTTRPVMSVSC-----KGTDYYTLLSVSDGCHASNEDI 60

Query: 61  KRAYRAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSDPVLRRQYDDSMMGLNNGYS 120
           K+AYRA ALQYHPDLVCDP LK++ T+MFVQLNAAYKTLSDPVLRR+YDDS+MGL   + 
Sbjct: 61  KKAYRAKALQYHPDLVCDPSLKDKCTRMFVQLNAAYKTLSDPVLRREYDDSLMGLKGNHH 120

Query: 121 YERRGFEVD-RTVWQRQILELKRRSACQRDRSV-SWGGRMRARN 161
               GF+ D R +WQRQILEL RRS  +R+ S+ SWGGRMRA+N
Sbjct: 121 GTSTGFKGDYRDLWQRQILELNRRSNLRRNWSLSSWGGRMRAQN 158

[Close]

BLAST of CmaCh19G002670 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 )

HSP 1 Score: 71.2 bits (173), Expect = 8.5e-13
Identity = 55/165 (33.33%), Postives = 83/165 (50.30%), Query Frame = 0


Query: 5   PNSSPNRVAFFTPMVSNPTRPMVGLSCKAATTKGPD--YYKLLSVSSGCNASGEEIKRAY 64
           P S P  +++ T    + TR    L+      +  D  +Y LL V+   + +  EIK+AY
Sbjct: 29  PTSIPTTISYPTRTRFSSTRIQSRLTHDDPVKQSEDLSFYDLLGVTE--SVTLPEIKQAY 88

Query: 65  RAMALQYHPDLVCDPLLKEQSTKMFVQLNAAYKTLSDPVLRRQYD-DSMMGLNNGYSYER 124
           + +A +YHPD V  P   E+ T  F+++  AY+TLSDP  R  YD D  MG +  +S  R
Sbjct: 89  KQLARKYHPD-VSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDLSMGFSFSFSGRR 148

Query: 125 RGFEVDRTV---------WQRQILELKRRSACQRDRSVSWGGRMR 158
           +       V         WQ Q+  L+RRS  + + ++SW  RMR
Sbjct: 149 QNRYDQEVVEEKSEWKAKWQTQLSGLRRRSNQKDNNTMSWAARMR 190

[Close]

BLAST of CmaCh19G002670 vs. TAIR 10
Match: AT2G35720.1 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 32  KAATTKGP--DYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLLKEQSTKMFVQ 91
           +AA T  P  + Y LL++S    AS EEI++AYR  A  YHPD +  P +KE +T+ F +
Sbjct: 5   EAAPTGPPNRELYALLNLSP--EASDEEIRKAYRQWAQVYHPDKIQSPQMKEVATENFQR 64

Query: 92  LNAAYKTLSDPVLRRQYD-DSMMGLNNGYSYERRGFEVDRTVWQRQILELKRRS 143
           +  AY+ LSD   R  YD   M GLN+G     R  + D    + ++  +KRR+
Sbjct: 65  ICEAYEILSDETKRLIYDLYGMEGLNSGLELGPRLSKADEI--KEELERIKRRN 114

[Close]

BLAST of CmaCh19G002670 vs. TAIR 10
Match: AT1G80030.1 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 20  SNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLL 79
           S P R   G S     T G DYY  L VS   +A+ +EIK AYR +A QYHPD+  +P  
Sbjct: 56  STPYRNRRGRSLVVFATSG-DYYATLGVSK--SANNKEIKAAYRRLARQYHPDVNKEP-- 115

Query: 80  KEQSTKMFVQLNAAYKTLSDPVLRRQYD 108
              +T+ F +++AAY+ LSD   R  YD
Sbjct: 116 --GATEKFKEISAAYEVLSDEQKRALYD 136

[Close]

BLAST of CmaCh19G002670 vs. TAIR 10
Match: AT1G80030.3 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 20  SNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLL 79
           S P R   G S     T G DYY  L VS   +A+ +EIK AYR +A QYHPD+  +P  
Sbjct: 56  STPYRNRRGRSLVVFATSG-DYYATLGVSK--SANNKEIKAAYRRLARQYHPDVNKEP-- 115

Query: 80  KEQSTKMFVQLNAAYKTLSDPVLRRQYD 108
              +T+ F +++AAY+ LSD   R  YD
Sbjct: 116 --GATEKFKEISAAYEVLSDEQKRALYD 136

[Close]

BLAST of CmaCh19G002670 vs. TAIR 10
Match: AT1G80030.2 (Molecular chaperone Hsp40/DnaJ family protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 20  SNPTRPMVGLSCKAATTKGPDYYKLLSVSSGCNASGEEIKRAYRAMALQYHPDLVCDPLL 79
           S P R   G S     T G DYY  L VS   +A+ +EIK AYR +A QYHPD+  +P  
Sbjct: 56  STPYRNRRGRSLVVFATSG-DYYATLGVSK--SANNKEIKAAYRRLARQYHPDVNKEP-- 115

Query: 80  KEQSTKMFVQLNAAYKTLSDPVLRRQYD 108
              +T+ F +++AAY+ LSD   R  YD
Sbjct: 116 --GATEKFKEISAAYEVLSDEQKRALYD 136

The following BLAST results are available for this feature:

BLAST of CmaCh19G002670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SDN0	1.2e-11	33.33	Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ2...	[more]
Q5U458	2.9e-10	40.38	DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=2	[more]
A4XKA5	3.8e-10	54.41	Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 4349...	[more]
Q9NVH1	6.5e-10	39.42	DnaJ homolog subfamily C member 11 OS=Homo sapiens OX=9606 GN=DNAJC11 PE=1 SV=2	[more]
Q5RC70	6.5e-10	39.42	DnaJ homolog subfamily C member 11 OS=Pongo abelii OX=9601 GN=DNAJC11 PE=2 SV=1	[more]

BLAST of CmaCh19G002670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HXC8	1.2e-78	100.00	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HH09	1.1e-76	97.96	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0K7A4	5.0e-45	62.79	J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G061190 PE=4 SV=1	[more]
A0A6J1EIE4	6.5e-45	64.02	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JPJ3	1.2e-43	60.71	chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of CmaCh19G002670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967659.1	2.4e-78	100.00	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima]	[more]
XP_022963776.1	2.3e-76	97.96	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata] >XP_023511548...	[more]
XP_038888723.1	3.5e-53	68.21	dnaJ homolog subfamily A member 3, mitochondrial-like [Benincasa hispida]	[more]
XP_004136866.1	1.0e-44	62.79	chaperone protein dnaJ 20, chloroplastic [Cucumis sativus]	[more]
XP_022927706.1	1.3e-44	64.02	chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of CmaCh19G002670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13830.2	8.5e-13	33.33	DNAJ-like 20	[more]
AT2G35720.1	3.9e-10	38.60	DNAJ heat shock N-terminal domain-containing protein	[more]
AT1G80030.1	3.3e-09	43.18	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.3	3.3e-09	43.18	Molecular chaperone Hsp40/DnaJ family protein	[more]
AT1G80030.2	3.3e-09	43.18	Molecular chaperone Hsp40/DnaJ family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	PRINTS	PR00625	JDOMAIN	coord: 82..102 score: 31.25 coord: 62..77 score: 44.2 coord: 44..62 score: 32.64
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 39..102 e-value: 1.1E-18 score: 78.1
IPR001623	DnaJ domain	PFAM	PF00226	DnaJ	coord: 40..107 e-value: 5.4E-19 score: 68.1
IPR001623	DnaJ domain	PROSITE	PS50076	DNAJ_2	coord: 40..110 score: 18.014336
IPR001623	DnaJ domain	CDD	cd06257	DnaJ	coord: 40..99 e-value: 4.78234E-19 score: 74.1189
IPR036869	Chaperone J-domain superfamily	GENE3D	1.10.287.110	DnaJ domain	coord: 28..128 e-value: 1.4E-22 score: 81.9
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 38..114
None	No IPR available	PANTHER	PTHR45090:SF8	CHAPERONE DNAJ DOMAIN PROTEIN	coord: 25..161
None	No IPR available	PANTHER	PTHR45090	CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC	coord: 25..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G002670.1	CmaCh19G002670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0009507	chloroplast