CmaCh19G001890 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G001890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAC domain-containing protein
Location	Cma_Chr19: 1256469 .. 1257880 (-)
RNA-Seq Expression	CmaCh19G001890
Synteny	CmaCh19G001890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTGAGATTCAAGCCTACTGATCCGCAACTTCTTCAATATCTACACTGGAAAATTCATGGCCAACCATATTTCAAACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGACGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCAGCCAGTCCAATTTTTGCTACCAAAACCGATAATACAATAATCGGCTATTGCAAACGCTTTAGGTTCGTTTTGTCATTTTGATTTCAATTTTTGATAGATTCTTTAACCTTATGTTTGTGTCCTTTGAACATTTTAGGTACGAAAATGTCCAATTGCCCGAGCGTCATGGCGAATGGATTATGCATGAATATAGCTTGCATCAAGATTCGATACAACAAGCTGTAGATTTAGATTATGTTTTATGCCGATTCAAAAAGAATGAAAGACTTAAAAGAAAATTACAAAAAGATCTCGAGGAGCAGCAACATAGCAAGAGAAGAATGACCACCTGAATTCTTTCATAGTGGAAGTCGTGCACTACAACTAACACTTCAGATGATCCAACCGATTTTAGAATATTAAATATTTGAATTTTATTAGATTTTAGTTATTTATGTAATATTTGAGGAAGATAGATATTTTTTTTAAAATAATTAATAAAATAGAGATTTCGGTTGTAAAATCCAAAATATTAACTAACCTCTCTAATTTCAAAAGCCTTAAAATTCTCTTATAATATTTTCCCTTCAAAATTTTATGATAAAATAATAATAATAATAATATTAATATAATTAAAAAAATAGAAAATCAATAATTTATATATCCTTATTCATTAATATATTATTACTAAATAATTAAACATTTAATTTAATCTAAAGTACAAAAAAATAAATTAAAGACATTATTCTTTTTTTTTTTAAAGTTAAAAAATGTAAGGATATTTTTATTAATTTAGTTTTTTTTTTTTTAAAATTTATAATTTAGCCCTATTTAAAACAAAAATATAAAATGGAGGGAAATGGGGTGCACGCGCCAAGAATACTACTAGCTCGATTAGGAGAGGCGAATGAGACGACGGTAGGGCAGCCGAACACCGGCGCTGAGATCGGCGGAAACTCATGCAAATTCTTCTCAGTTCAGAACCTCAAAGCCTTTCCAGTTTCGTAAACGACGGTTCATCTTCAGGTGTCTTGGGAGTCCATGATTGTTGCTGTCTCGACCTTCATTTCCATTATCCGCTCCCCCGAGCCCCTCACATGATTCTGACTCTAGAGTTTCTGTTCTGA

mRNA sequence

ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTGAGATTCAAGCCTACTGATCCGCAACTTCTTCAATATCTACACTGGAAAATTCATGGCCAACCATATTTCAAACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGACGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCAGCCAGTCCAATTTTTGCTACCAAAACCGATAATACAATAATCGGCTATTGCAAACGCTTTAGTTCAGAACCTCAAAGCCTTTCCAGTTTCGTAAACGACGGTTCATCTTCAGGTGTCTTGGGAGTCCATGATTGTTGCTGTCTCGACCTTCATTTCCATTATCCGCTCCCCCGAGCCCCTCACATGATTCTGACTCTAGAGTTTCTGTTCTGA

Coding sequence (CDS)

ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTGAGATTCAAGCCTACTGATCCGCAACTTCTTCAATATCTACACTGGAAAATTCATGGCCAACCATATTTCAAACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGACGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCAGCCAGTCCAATTTTTGCTACCAAAACCGATAATACAATAATCGGCTATTGCAAACGCTTTAGTTCAGAACCTCAAAGCCTTTCCAGTTTCGTAAACGACGGTTCATCTTCAGGTGTCTTGGGAGTCCATGATTGTTGCTGTCTCGACCTTCATTTCCATTATCCGCTCCCCCGAGCCCCTCACATGATTCTGACTCTAGAGTTTCTGTTCTGA

Protein sequence

MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCKRFSSEPQSLSSFVNDGSSSGVLGVHDCCCLDLHFHYPLPRAPHMILTLEFLF

Homology

[Close]

BLAST of CmaCh19G001890 vs. ExPASy Swiss-Prot
Match: Q9ZNU2 (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 33/104 (31.73%), Postives = 46/104 (44.23%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + D DLY + +PWE+  +      + 
Sbjct: 15  PNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAK-ASFGEQE 74

Query: 67  LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFAT 110
            YFF+   R   N  R     NR     +G W    +  P+ +T
Sbjct: 75  WYFFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPVIST 110

[Close]

BLAST of CmaCh19G001890 vs. ExPASy Swiss-Prot
Match: A0SPJ4 (NAC transcription factor NAM-B1 OS=Triticum dicoccoides OX=85692 GN=NAM-B1 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.3e-04
Identity = 35/106 (33.02%), Postives = 48/106 (45.28%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PWE+  +   I  + 
Sbjct: 32  PELPPGFRFHPTDEELVVHYLKKKADKAPLPVNIIAEVDLY-KFDPWELPEK-ATIGEQE 91

Query: 67  LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKT 112
            YFF+   R   N  R     NR     +G W    +  PI A+ T
Sbjct: 92  WYFFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPILASGT 129

[Close]

BLAST of CmaCh19G001890 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 5.6e-04
Identity = 35/115 (30.43%), Postives = 50/115 (43.48%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PWE+  +      + 
Sbjct: 27  PELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLY-KFDPWELPEK-ANFGEQE 86

Query: 67  LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 121
            YFF+   R   N  R     NR     +G W    +  PI A+ +    +G  K
Sbjct: 87  WYFFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPIMASGSTREKVGVKK 133

[Close]

BLAST of CmaCh19G001890 vs. ExPASy Swiss-Prot
Match: Q8GY42 (NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.6e-04
Identity = 37/103 (35.92%), Postives = 46/103 (44.66%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PWE  L      GEH
Sbjct: 14  PHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLY-KFDPWE--LPSKASFGEH 73

Query: 67  -LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIF 108
             YFF+   R   N  R     NR     +G W    +  PIF
Sbjct: 74  EWYFFSPRDRKYPNGVR----PNR--AATSGYWKATGTDKPIF 107

[Close]

BLAST of CmaCh19G001890 vs. ExPASy TrEMBL
Match: A0A6J1HSR6 (NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC111467095 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.2e-69
Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
           IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK
Sbjct: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120

Query: 121 RFSSE 126
           RF  E
Sbjct: 121 RFRYE 125

[Close]

BLAST of CmaCh19G001890 vs. ExPASy TrEMBL
Match: A0A6J1HVP9 (NAC domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111467098 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.5e-68
Identity = 121/125 (96.80%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
           IDGEHLYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTDNTIIGYCK
Sbjct: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120

Query: 121 RFSSE 126
           RF  E
Sbjct: 121 RFRYE 125

[Close]

BLAST of CmaCh19G001890 vs. ExPASy TrEMBL
Match: A0A6J1HH13 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463973 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.9e-63
Identity = 117/129 (90.70%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRF+PTD QLLQYL WKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFRPTDQQLLQYLIWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
            DGE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSAS IFATKTD TIIGYCK
Sbjct: 61  TDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASSIFATKTDKTIIGYCK 120

Query: 121 RFSSEPQSL 130
           RF  E   L
Sbjct: 121 RFRYENAQL 129

[Close]

BLAST of CmaCh19G001890 vs. ExPASy TrEMBL
Match: A0A6J1HIZ2 (NAC transcription factor 25-like OS=Cucurbita moschata OX=3662 GN=LOC111463972 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.4e-60
Identity = 111/129 (86.05%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHD PLLPVGVRF+PTD QLLQYL WKIH QPYFKRAVLDCDLYG+MEPWEIWLRFGG
Sbjct: 1   MDSHDRPLLPVGVRFRPTDQQLLQYLLWKIHDQPYFKRAVLDCDLYGDMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
            DGE+LYFFTKLKRSTNNSGRLS HINRKVGL NGTWSGENSA+PIFA KTD TIIGYCK
Sbjct: 61  TDGENLYFFTKLKRSTNNSGRLSVHINRKVGLTNGTWSGENSANPIFAAKTDKTIIGYCK 120

Query: 121 RFSSEPQSL 130
           RF  E   L
Sbjct: 121 RFRYENAQL 129

[Close]

BLAST of CmaCh19G001890 vs. ExPASy TrEMBL
Match: A0A6J1HXC3 (NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55
Identity = 107/125 (85.60%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGVRF+PTDPQLL+YL++KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
           I GEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTD  IIGYCK
Sbjct: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120

Query: 121 RFSSE 126
            F  E
Sbjct: 121 CFRYE 125

[Close]

BLAST of CmaCh19G001890 vs. NCBI nr
Match: XP_022967651.1 (NAC domain-containing protein 72-like [Cucurbita maxima])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
           IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK
Sbjct: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120

Query: 121 RFSSE 126
           RF  E
Sbjct: 121 RFRYE 125

[Close]

BLAST of CmaCh19G001890 vs. NCBI nr
Match: XP_022967653.1 (NAC domain-containing protein 18-like [Cucurbita maxima])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 121/125 (96.80%), Postives = 121/125 (96.80%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
           IDGEHLYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTDNTIIGYCK
Sbjct: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120

Query: 121 RFSSE 126
           RF  E
Sbjct: 121 RFRYE 125

[Close]

BLAST of CmaCh19G001890 vs. NCBI nr
Match: KAG6571617.1 (NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-63
Identity = 117/129 (90.70%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHD PLLPVGVRF+PTD QLLQYLHWKIHGQPYF+RAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDHPLLPVGVRFRPTDQQLLQYLHWKIHGQPYFRRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
            DGE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTD TIIGYCK
Sbjct: 61  TDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDKTIIGYCK 120

Query: 121 RFSSEPQSL 130
           RF  E   L
Sbjct: 121 RFRYENAQL 129

[Close]

BLAST of CmaCh19G001890 vs. NCBI nr
Match: XP_023511534.1 (NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.1 bits (645), Expect = 1.8e-63
Identity = 117/125 (93.60%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           M SHD  LLPVGVRF+PTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MGSHDRSLLPVGVRFRPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
           IDGE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTD TIIGYCK
Sbjct: 61  IDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDKTIIGYCK 120

Query: 121 RFSSE 126
           RF  E
Sbjct: 121 RFRYE 125

[Close]

BLAST of CmaCh19G001890 vs. NCBI nr
Match: XP_022963781.1 (NAC domain-containing protein 30-like [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 3.9e-63
Identity = 117/129 (90.70%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRF+PTD QLLQYL WKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFRPTDQQLLQYLIWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120
            DGE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSAS IFATKTD TIIGYCK
Sbjct: 61  TDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASSIFATKTDKTIIGYCK 120

Query: 121 RFSSEPQSL 130
           RF  E   L
Sbjct: 121 RFRYENAQL 129

[Close]

BLAST of CmaCh19G001890 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.8e-05
Identity = 33/104 (31.73%), Postives = 46/104 (44.23%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + D DLY + +PWE+  +      + 
Sbjct: 15  PNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAK-ASFGEQE 74

Query: 67  LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFAT 110
            YFF+   R   N  R     NR     +G W    +  P+ +T
Sbjct: 75  WYFFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPVIST 110

[Close]

BLAST of CmaCh19G001890 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 )

HSP 1 Score: 46.6 bits (109), Expect = 2.3e-05
Identity = 34/108 (31.48%), Postives = 48/108 (44.44%), Query Frame = 0


Query: 9   LPVGVRFKPTDPQLLQ-YLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEHLY 68
           LP G RF PTD +L+  YL  KI  Q +  +A+ D DL  + EPWE+  +   + G+  Y
Sbjct: 16  LPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMGGKEWY 75

Query: 69  FFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTI 116
           FF+   R      R +   N       G W        IF + T   +
Sbjct: 76  FFSLRDRKYPTGVRTNRATN------TGYWKTTGKDKEIFNSTTSELV 115

[Close]

BLAST of CmaCh19G001890 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 )

HSP 1 Score: 46.6 bits (109), Expect = 2.3e-05
Identity = 34/108 (31.48%), Postives = 48/108 (44.44%), Query Frame = 0


Query: 9   LPVGVRFKPTDPQLLQ-YLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEHLY 68
           LP G RF PTD +L+  YL  KI  Q +  +A+ D DL  + EPWE+  +   + G+  Y
Sbjct: 16  LPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMGGKEWY 75

Query: 69  FFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTI 116
           FF+   R      R +   N       G W        IF + T   +
Sbjct: 76  FFSLRDRKYPTGVRTNRATN------TGYWKTTGKDKEIFNSTTSELV 115

[Close]

BLAST of CmaCh19G001890 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 )

HSP 1 Score: 45.1 bits (105), Expect = 6.8e-05
Identity = 37/103 (35.92%), Postives = 46/103 (44.66%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PWE  L      GEH
Sbjct: 14  PHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLY-KFDPWE--LPSKASFGEH 73

Query: 67  -LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIF 108
             YFF+   R   N  R     NR     +G W    +  PIF
Sbjct: 74  EWYFFSPRDRKYPNGVR----PNR--AATSGYWKATGTDKPIF 107

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BLAST of CmaCh19G001890 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 )

HSP 1 Score: 44.7 bits (104), Expect = 8.9e-05
Identity = 32/104 (30.77%), Postives = 46/104 (44.23%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PWE+  +      + 
Sbjct: 15  PNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLY-KFDPWELPAK-ASFGEQE 74

Query: 67  LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFAT 110
            YFF+   R   N  R     NR     +G W    +  P+ A+
Sbjct: 75  WYFFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPVLAS 110

The following BLAST results are available for this feature:

BLAST of CmaCh19G001890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNU2	2.5e-04	31.73	NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 ...	[more]
A0SPJ4	4.3e-04	33.02	NAC transcription factor NAM-B1 OS=Triticum dicoccoides OX=85692 GN=NAM-B1 PE=4 ...	[more]
A2YMR0	5.6e-04	30.43	NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC0...	[more]
Q8GY42	9.6e-04	35.92	NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1	[more]

BLAST of CmaCh19G001890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HSR6	5.2e-69	98.40	NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC11146709...	[more]
A0A6J1HVP9	7.5e-68	96.80	NAC domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11146709...	[more]
A0A6J1HH13	1.9e-63	90.70	NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1HIZ2	3.4e-60	86.05	NAC transcription factor 25-like OS=Cucurbita moschata OX=3662 GN=LOC111463972 P...	[more]
A0A6J1HXC3	1.1e-55	85.60	NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=...	[more]

BLAST of CmaCh19G001890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967651.1	1.1e-68	98.40	NAC domain-containing protein 72-like [Cucurbita maxima]	[more]
XP_022967653.1	1.5e-67	96.80	NAC domain-containing protein 18-like [Cucurbita maxima]	[more]
KAG6571617.1	1.4e-63	90.70	NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023511534.1	1.8e-63	93.60	NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963781.1	3.9e-63	90.70	NAC domain-containing protein 30-like [Cucurbita moschata]	[more]

BLAST of CmaCh19G001890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52880.1	1.8e-05	31.73	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT2G24430.1	2.3e-05	31.48	NAC domain containing protein 38	[more]
AT2G24430.2	2.3e-05	31.48	NAC domain containing protein 38	[more]
AT1G61110.1	6.8e-05	35.92	NAC domain containing protein 25	[more]
AT3G15510.1	8.9e-05	30.77	NAC domain containing protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 10..122 e-value: 7.1E-12 score: 46.3
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 9..172 score: 10.108032
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 18..130 e-value: 7.0E-13 score: 50.7
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 5..123
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 9..126
None	No IPR available	PANTHER	PTHR31989:SF220	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 9..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G001890.1	CmaCh19G001890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding