CmaCh19G000790 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G000790
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	LOB domain-containing protein
Location	Cma_Chr19: 455219 .. 457045 (+)
RNA-Seq Expression	CmaCh19G000790
Synteny	CmaCh19G000790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGAGGCGGCGGTGGTGGTGGCGGTGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGTTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTGTGTCGCCCATATTTTTGCTCTCCAACAACAGGTAATTTTGAATATGAATGTAAGATCATGTTTTTGAGTGTTCGCAAAACGTGATTAACCCAATTCAAGGTAAGCTATACGGTTTAGGGTTGAATTACGAACTTATTTCAACTTATTTGAACTATTTGAATTGGGTTGAGTTTCAAATAGAGGAATATTTTACTCACCGAGTTGATTCATGAGTTTCTCTAAAATTAGATAGAGTTGAATCAAATCATCTCGTATTTATGTTAATTTAAAGAAATTAATTTTTTATTATTTATTCTCCCAAATATTTTTTAAACTATTTGGAAGGTAATTTTTCAAATATATATTGAAGTTAGTGGCAATGTTAATTAAATATTTATAAATAAATAAATATCTTATTAAGGTTGGATTGTGAGATCACACGTAAATTAGAGAAGGAAACCAAGCATTCTTTTTATAAGTGTAACATCCCAAGACGACCGTTAACAGATATTATCTGATTTGGCATGGTTACGTATCGCCGACAGCCTCATAGCTTTAAAACGTGTTGACTAGGGAGAGGTTTCTACACCCTTCTAAGAAATGTTCGTTTCCCTCTCCAACTGATGTGAGATCTCACAATCCGCATCTTTGGGGGTTTAGCGTTCTCGTTGGCACACCGCCCAGTGTCTGGCTTTGTACCATTTATAACATCTCTAGTCCACTATTAGCAAACATTGTCCGCTTGATCTGTTACATATCGTTGACAACCTCACACTTTTAAAACGCGTCTATTAGGGAAATGTTTCCACACCCTTATAAGAAATGCTTCGTTCCCCTCTCTAACCAATGTACGATCTCACACTAAGTGTTTGGAAACCTTTTCTTAGCAGACACGTTTTAAAATCATGAGTCCAAGAACCAAAGCAGACAATATCCACTAAGGGTGGTATTTGAGCAAAGAAAAATTTAAATAAATGACCTCAATGACTCAAACTAACCTAACAAAAAAAAAAAATTAATGGTTGGGTTTGGTTCAATATTTAACAAAATTCGTTTAGATTGAAAAAATTTACAAGTCTAACCATTGGATTAGGTCTAAAAGTCTCAACCCGACTCAACCGAACCCACAAACACCTGTACATATGCTTCTTTTTAAAATCCTTGAAGTGGGTTTTGTTTGTTGTTGTTGATTTTGAAGGTGGCATACCTACAAGCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGATTCAGGAGGCAACATGGAGCTTCAATGGACAGGAAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAATCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCTTGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA

mRNA sequence

ATGGCTTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGAGGCGGCGGTGGTGGTGGCGGTGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGTTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTGTGTCGCCCATATTTTTGCTCTCCAACAACAGGTGGCATACCTACAAGCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGATTCAGGAGGCAACATGGAGCTTCAATGGACAGGAAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAATCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCTTGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGAGGCGGCGGTGGTGGTGGCGGTGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGTTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTGTGTCGCCCATATTTTTGCTCTCCAACAACAGGTGGCATACCTACAAGCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGATTCAGGAGGCAACATGGAGCTTCAATGGACAGGAAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAATCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCTTGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA

Protein sequence

MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN

Homology

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BLAST of CmaCh19G000790 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.3e-52
Identity = 130/241 (53.94%), Postives = 153/241 (63.49%), Query Frame = 0


Query: 22  GGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHV 81
           G G   G GSPCGACKFLRRKC ++CIFAPYFSSEQGAARFAA+HKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 82  PVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQAQLMQAKAQLAQTLMDSG 141
           P+HDRCEAVVTIAYEAQAR+ DPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 142 G---------NMELQW-------TGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANN 201
           G         N  + W        GS  +   N     Y     N  VSPQSS+E + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 202 DA------ALMFMNHYQ--------------ESQTLARRRSASCHGDLGELQALALRMMR 227
            +      A +   H+Q              E     +R  + C  DLGELQALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

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BLAST of CmaCh19G000790 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 2.0e-41
Identity = 97/138 (70.29%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 6   SSSSTANSSVSGGGGGGGGG---------GGGGGSPCGACKFLRRKCVAECIFAPYFSSE 65
           S      ++V GGGGG GGG         GGGGG PCGACKFLRRKCV  CIFAPYF SE
Sbjct: 2   SGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSE 61

Query: 66  QGAARFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQ 125
           QG+A FAAVHKVFGASNVSKLLLH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQ
Sbjct: 62  QGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQ 121

Query: 126 QQVAYLQAQLMQAKAQLA 135
           QQV  LQA++   +A LA
Sbjct: 122 QQVVNLQAEVSYLQAHLA 139

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BLAST of CmaCh19G000790 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-39
Identity = 77/109 (70.64%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 30  GSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPVHDRCEA 89
           GSPCGACKFLRRKC   C+FAPYF  EQGA+ FAA+HKVFGASN SKLL H+P+ DRCEA
Sbjct: 9   GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEA 68

Query: 90  VVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQAQLMQAKAQLAQTLM 139
            +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQA+L   K Q AQ+++
Sbjct: 69  AITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMI 117

[Close]

BLAST of CmaCh19G000790 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-39
Identity = 83/108 (76.85%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 28  GGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPVHDRC 87
           G GSPCGACKFLRRKCV  C+FAPYF  EQGAA FAA+HKVFGASNVSKLL H+P+ DR 
Sbjct: 3   GFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRP 62

Query: 88  EAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQAQLMQAKAQLAQ 136
           EA VTI+YEAQAR+ DP+YGCVAHIFALQQQV  LQAQL   KA  AQ
Sbjct: 63  EAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

[Close]

BLAST of CmaCh19G000790 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-36
Identity = 107/215 (49.77%), Postives = 130/215 (60.47%), Query Frame = 0


Query: 8   SSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHK 67
           SS+ N S S GGGGG         PCGACKFLRRKCVA CIFAPYF SEQGAA FAAVHK
Sbjct: 2   SSSGNPSSSSGGGGG---------PCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHK 61

Query: 68  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQAQLM 127
           VFGASNVSKLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQ +L 
Sbjct: 62  VFGASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELS 121

Query: 128 QAKAQLA--QTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANN 187
             +A LA  +        + +  +GS        +P+      ++P+V   SS+     +
Sbjct: 122 YLQAHLATLELPQPQPPQVPVSSSGSLQALSITDLPT------ISPSVYDLSSIFEPVMS 181

Query: 188 DAALMFMNHYQESQTLARRRSASCHGDLGELQALA 221
               M     + S  L    S+S  G  GELQALA
Sbjct: 182 STWAM-QQQPRPSDHLFGVPSSSNMGGGGELQALA 200

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BLAST of CmaCh19G000790 vs. ExPASy TrEMBL
Match: A0A6J1HWM7 (LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111466950 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.4e-114
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60
           MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60

Query: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120
           RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180
           YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE
Sbjct: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180

Query: 181 SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 227
           SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN
Sbjct: 181 SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 226

[Close]

BLAST of CmaCh19G000790 vs. ExPASy TrEMBL
Match: A0A6J1HIG3 (LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463903 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.4e-108
Identity = 217/226 (96.02%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60
           MASSSSSSSTANSSVS    GGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA
Sbjct: 1   MASSSSSSSTANSSVS----GGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60

Query: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120
           RFAAVHKVFGASNVSKLL HVP HDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180
            LQAQLMQAKAQLAQTLM+SGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE
Sbjct: 121 CLQAQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180

Query: 181 SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 227
           SAANNDAALMFMNHYQESQTL RRRSASCHGDLGELQALALRMMRN
Sbjct: 181 SAANNDAALMFMNHYQESQTLGRRRSASCHGDLGELQALALRMMRN 222

[Close]

BLAST of CmaCh19G000790 vs. ExPASy TrEMBL
Match: A0A5D3C536 (LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00040 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.5e-79
Identity = 180/241 (74.69%), Postives = 197/241 (81.74%), Query Frame = 0


Query: 4   SSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFA 63
           +SSSS++ N+SVS     G GG GGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFA
Sbjct: 2   ASSSSTSTNTSVS-----GCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 61

Query: 64  AVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQ 123
           A+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ
Sbjct: 62  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 121

Query: 124 AQLMQAKAQLAQTLMDSGGNMELQWTGSFNN-NLSNG-IP-SNYETQIMNPAVSPQSSVE 183
            QLMQAKAQLAQTLMDSG NME+QWTG FNN NLSNG IP +NY+TQIMN   +PQSS+E
Sbjct: 122 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP-TPQSSLE 181

Query: 184 SAANNDAALMFMNH---YQES------------QTLARRRSASCHGDLGELQALALRMMR 227
           SAANND AL+F+N    + ES            Q   R++ +S H DLGEL ALALRMMR
Sbjct: 182 SAANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMR 236

[Close]

BLAST of CmaCh19G000790 vs. ExPASy TrEMBL
Match: A0A1S3CG76 (LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.5e-79
Identity = 180/241 (74.69%), Postives = 197/241 (81.74%), Query Frame = 0


Query: 4   SSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFA 63
           +SSSS++ N+SVS     G GG GGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFA
Sbjct: 2   ASSSSTSTNTSVS-----GCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 61

Query: 64  AVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQ 123
           A+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ
Sbjct: 62  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 121

Query: 124 AQLMQAKAQLAQTLMDSGGNMELQWTGSFNN-NLSNG-IP-SNYETQIMNPAVSPQSSVE 183
            QLMQAKAQLAQTLMDSG NME+QWTG FNN NLSNG IP +NY+TQIMN   +PQSS+E
Sbjct: 122 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP-TPQSSLE 181

Query: 184 SAANNDAALMFMNH---YQES------------QTLARRRSASCHGDLGELQALALRMMR 227
           SAANND AL+F+N    + ES            Q   R++ +S H DLGEL ALALRMMR
Sbjct: 182 SAANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMR 236

[Close]

BLAST of CmaCh19G000790 vs. ExPASy TrEMBL
Match: A0A0A0LAE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.9e-79
Identity = 182/242 (75.21%), Postives = 198/242 (81.82%), Query Frame = 0


Query: 4   SSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFA 63
           +SSSS++ N+S+S GGGGG G GGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFA
Sbjct: 2   ASSSSTSTNTSMS-GGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 61

Query: 64  AVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQ 123
           A+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ
Sbjct: 62  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 121

Query: 124 AQLMQAKAQLAQTLMDSGGNMELQWTGSF-NNNLSNG-IPS-NYETQIMNPAVSPQSSVE 183
            QLM AKAQLA+TLMDSG NME+QWTG F NNNLSNG IPS NY+TQI N   SPQSS+E
Sbjct: 122 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP-SPQSSLE 181

Query: 184 SAANNDAALMFMNH------------YQESQTL----ARRRSASCHGDLGELQALALRMM 227
           SAANND AL+F+N              QE Q L     ++  +S H DLGEL ALALRMM
Sbjct: 182 SAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMM 241

[Close]

BLAST of CmaCh19G000790 vs. NCBI nr
Match: XP_022967414.1 (LOB domain-containing protein 16-like [Cucurbita maxima])

HSP 1 Score: 421.4 bits (1082), Expect = 4.9e-114
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60
           MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60

Query: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120
           RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180
           YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE
Sbjct: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180

Query: 181 SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 227
           SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN
Sbjct: 181 SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 226

[Close]

BLAST of CmaCh19G000790 vs. NCBI nr
Match: XP_023511722.1 (LOB domain-containing protein 16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.9 bits (1060), Expect = 1.8e-111
Identity = 223/226 (98.67%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60
           MASSSSSSSTANSSVS GGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA
Sbjct: 1   MASSSSSSSTANSSVS-GGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60

Query: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120
           RFAAVHKVFGASNVSKLLLHVP HDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180
           YLQAQLMQAKAQLAQTLM+SGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE
Sbjct: 121 YLQAQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180

Query: 181 SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 227
           SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN
Sbjct: 181 SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 225

[Close]

BLAST of CmaCh19G000790 vs. NCBI nr
Match: KAG7011259.1 (LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404.1 bits (1037), Expect = 8.2e-109
Identity = 219/226 (96.90%), Postives = 221/226 (97.79%), Query Frame = 0


Query: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60
           MASSSSSSSTANSSVS GGGGGGGGGGGGGSPCGACKFLRRKCVA+CIFAPYFSSEQGAA
Sbjct: 1   MASSSSSSSTANSSVS-GGGGGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFSSEQGAA 60

Query: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120
           RFAAVHKVFGASNVSKLL HVP HDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180
            LQAQLMQAKAQLAQTLM+SGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE
Sbjct: 121 CLQAQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180

Query: 181 SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 227
           SAANNDAALMFMNHYQESQTL RRRSASCHGDLGELQALALRMMRN
Sbjct: 181 SAANNDAALMFMNHYQESQTLGRRRSASCHGDLGELQALALRMMRN 225

[Close]

BLAST of CmaCh19G000790 vs. NCBI nr
Match: XP_022963633.1 (LOB domain-containing protein 16-like [Cucurbita moschata])

HSP 1 Score: 400.6 bits (1028), Expect = 9.0e-108
Identity = 217/226 (96.02%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60
           MASSSSSSSTANSSVS    GGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA
Sbjct: 1   MASSSSSSSTANSSVS----GGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60

Query: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120
           RFAAVHKVFGASNVSKLL HVP HDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180
            LQAQLMQAKAQLAQTLM+SGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE
Sbjct: 121 CLQAQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVE 180

Query: 181 SAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 227
           SAANNDAALMFMNHYQESQTL RRRSASCHGDLGELQALALRMMRN
Sbjct: 181 SAANNDAALMFMNHYQESQTLGRRRSASCHGDLGELQALALRMMRN 222

[Close]

BLAST of CmaCh19G000790 vs. NCBI nr
Match: KAG6571511.1 (LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399.1 bits (1024), Expect = 2.6e-107
Identity = 216/225 (96.00%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 2   ASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAAR 61
           +SSSSSSSTANSSVS  GGGGGGGGGGGGSPCGACKFLRRKCVA+CIFAPYFSSEQGAAR
Sbjct: 4   SSSSSSSSTANSSVS--GGGGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFSSEQGAAR 63

Query: 62  FAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAY 121
           FAAVHKVFGASNVSKLL HVP HDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 
Sbjct: 64  FAAVHKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAC 123

Query: 122 LQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVES 181
           LQAQLMQAKAQLAQTLM+SGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVES
Sbjct: 124 LQAQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVES 183

Query: 182 AANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN 227
           AANNDAALMFMNHYQESQTL RRRSASCHGDLGELQALALRMMRN
Sbjct: 184 AANNDAALMFMNHYQESQTLGRRRSASCHGDLGELQALALRMMRN 226

[Close]

BLAST of CmaCh19G000790 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 205.3 bits (521), Expect = 5.2e-53
Identity = 130/241 (53.94%), Postives = 153/241 (63.49%), Query Frame = 0


Query: 22  GGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHV 81
           G G   G GSPCGACKFLRRKC ++CIFAPYFSSEQGAARFAA+HKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 82  PVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQAQLMQAKAQLAQTLMDSG 141
           P+HDRCEAVVTIAYEAQAR+ DPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 142 G---------NMELQW-------TGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANN 201
           G         N  + W        GS  +   N     Y     N  VSPQSS+E + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 202 DA------ALMFMNHYQ--------------ESQTLARRRSASCHGDLGELQALALRMMR 227
            +      A +   H+Q              E     +R  + C  DLGELQALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

[Close]

BLAST of CmaCh19G000790 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-42
Identity = 97/138 (70.29%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 6   SSSSTANSSVSGGGGGGGGG---------GGGGGSPCGACKFLRRKCVAECIFAPYFSSE 65
           S      ++V GGGGG GGG         GGGGG PCGACKFLRRKCV  CIFAPYF SE
Sbjct: 2   SGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSE 61

Query: 66  QGAARFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQ 125
           QG+A FAAVHKVFGASNVSKLLLH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQ
Sbjct: 62  QGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQ 121

Query: 126 QQVAYLQAQLMQAKAQLA 135
           QQV  LQA++   +A LA
Sbjct: 122 QQVVNLQAEVSYLQAHLA 139

[Close]

BLAST of CmaCh19G000790 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-40
Identity = 77/109 (70.64%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 30  GSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPVHDRCEA 89
           GSPCGACKFLRRKC   C+FAPYF  EQGA+ FAA+HKVFGASN SKLL H+P+ DRCEA
Sbjct: 9   GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEA 68

Query: 90  VVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQAQLMQAKAQLAQTLM 139
            +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQA+L   K Q AQ+++
Sbjct: 69  AITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMI 117

[Close]

BLAST of CmaCh19G000790 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-37
Identity = 107/215 (49.77%), Postives = 130/215 (60.47%), Query Frame = 0


Query: 8   SSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHK 67
           SS+ N S S GGGGG         PCGACKFLRRKCVA CIFAPYF SEQGAA FAAVHK
Sbjct: 2   SSSGNPSSSSGGGGG---------PCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHK 61

Query: 68  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQAQLM 127
           VFGASNVSKLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQ +L 
Sbjct: 62  VFGASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELS 121

Query: 128 QAKAQLA--QTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANN 187
             +A LA  +        + +  +GS        +P+      ++P+V   SS+     +
Sbjct: 122 YLQAHLATLELPQPQPPQVPVSSSGSLQALSITDLPT------ISPSVYDLSSIFEPVMS 181

Query: 188 DAALMFMNHYQESQTLARRRSASCHGDLGELQALA 221
               M     + S  L    S+S  G  GELQALA
Sbjct: 182 STWAM-QQQPRPSDHLFGVPSSSNMGGGGELQALA 200

[Close]

BLAST of CmaCh19G000790 vs. TAIR 10
Match: AT2G45410.1 (LOB domain-containing protein 19 )

HSP 1 Score: 148.7 bits (374), Expect = 5.8e-36
Identity = 77/115 (66.96%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 20  GGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLL 79
           G   GGG GG  PCGACKFLRRKCV  C+FAPYF +EQG ARFAAVHKVFGASN SK+LL
Sbjct: 4   GNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLL 63

Query: 80  HVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQAQLMQAKAQLA 135
            +P+H R +AVVT+ YEA ARI DPVYG V H+F+LQ QV  LQA+L   +A+L+
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLS 118

The following BLAST results are available for this feature:

BLAST of CmaCh19G000790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLB7	7.3e-52	53.94	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]
O22131	2.0e-41	70.29	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
Q9M2J7	1.9e-39	70.64	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
Q5UG13	1.9e-39	76.85	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
O81323	1.5e-36	49.77	LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S...	[more]

BLAST of CmaCh19G000790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HWM7	2.4e-114	100.00	LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC11146695...	[more]
A0A6J1HIG3	4.4e-108	96.02	LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A5D3C536	1.5e-79	74.69	LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CG76	1.5e-79	74.69	LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV...	[more]
A0A0A0LAE8	1.9e-79	75.21	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV...	[more]

BLAST of CmaCh19G000790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967414.1	4.9e-114	100.00	LOB domain-containing protein 16-like [Cucurbita maxima]	[more]
XP_023511722.1	1.8e-111	98.67	LOB domain-containing protein 16-like [Cucurbita pepo subsp. pepo]	[more]
KAG7011259.1	8.2e-109	96.90	LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022963633.1	9.0e-108	96.02	LOB domain-containing protein 16-like [Cucurbita moschata]	[more]
KAG6571511.1	2.6e-107	96.00	LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of CmaCh19G000790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42430.1	5.2e-53	53.94	lateral organ boundaries-domain 16	[more]
AT2G45420.1	1.4e-42	70.29	LOB domain-containing protein 18	[more]
AT3G58190.1	1.3e-40	70.64	lateral organ boundaries-domain 29	[more]
AT4G00220.1	1.0e-37	49.77	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G45410.1	5.8e-36	66.96	LOB domain-containing protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR31529:SF23	LOB DOMAIN-CONTAINING PROTEIN 16	coord: 26..225
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 26..225
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 32..130 e-value: 8.9E-37 score: 125.7
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 31..133 score: 23.074108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000790.1	CmaCh19G000790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus