CmaCh19G000570 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G000570
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	U3 small nucleolar RNA-associated protein 18 homolog
Location	Cma_Chr19: 310050 .. 312897 (+)
RNA-Seq Expression	CmaCh19G000570
Synteny	CmaCh19G000570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGAGGAAGGTCCCCACGGGTTGAAATGACACTTCTTACCTATAAAATTTTTCAATTTCTCTCGAGCTACAAATCCTTACTAATGTAGTCTCGTCTCAATCAAACTTACCATTTTGTATAGTTTTATACTCCCTATCGACACTAAATTAAAGGTTTAAAATTTGAGAACCAGTGTCTTTGCTGGCATTCGTTCTCTTCTCCAATCGATGTTGGATCTTACCGTCCACCCCTTCAGGACCTAGAGTCCTTGCTGGTACACCAGCCTGGTATCTAGCTATGATACTATTTATAACACCTCAAATCAACGGATAGCTCGTGCAAAGTTTTAAATTGCATTTGATAGGGAGAGAAATTTTCACACGGTTGGTGAGAACAATTGAAAAATAAAGTTGAGCCCAAGCCCACTTTGTAAAATAAAATAAAATTAATAAATAAAACAAAGAGGAAAACCCTAACCACCGTGTAAAATAAAACCTCTGTGCTGACTTATTCTTCTTCACGCTGTCTCCTCCTCCGCCTCTCTCCCGTTCCTACTTTCGCCGCCGCCGTCGTTCTTGTCCGCTCGTGCCTCCGCCGCGGATTTCTTTCTTCCGTTCGTTCCGGCGCAGCTCTCTCTTATTGGTTTTGCGCTGATTTTCTACTCCTTTGTTGTTACTGGTATGTCTTTCTAACGAAAAAAATAAAAACATTCTTGCCCCAAATTGGGACGCGGTTTGTGTTCGTTGTTTTGATTCGGACATGATGAATGTGGCTTATTGTTCTTCCGTGATGTAGAATTCAACTATTTGTTTTCAAAAATTAAGACAAAAAGGGTACACAATTTACAATGAAGGGATAAATTGAGCTTATGGATCGTGGGATTTTTTACTTCTGATGCATTTTTTGTTATCTTGTTAATATGATTGGTTTTGCAGGAGCTGAGTGGAAGATGAGTTTAATATCTCAAAATGTTGCTGTAATTAGTAGTACTGAGAATGTTAATGGGGATAATACTGTTGGCTCTTCATCTCTGTTGAGAAAAGTAGATGCTAGTGATGTAGAAAACTCTGGTGTAGATACTACCCGGTCAAAGAAGAGAAAGAAAGAACACAAAAAAGAAGATGAACAAATAGTAAAAGAACAACAAAAGGAAATGGAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGAAAAATGATTTCAGTGCTGAAGAAAAGGCTCCTGCTTTGTACATTATGGACCGCTCTGCAAATAATTCCCTTTCCGTGTATGAAAATGATGTTGGGCTCCTAGATGAGAGTTCGAGTAAGGAGGAAGCTCAGCAAAGAAAACCGGTATGGGTCGACGAGGAAGAGGAGAAGGCCTCAGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAAATCGATTTCGGGTTCAGAGTACGTGTCGCGACTGAGGGCTCAGCATGCCAAGCTAAACCCTGGAACCGAGTGGGCTCAACTTGATGCACAATCCAGGAGTGGCAGTGATGATGATGATGATCTATCATCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTTACGATAATGTCGATTCTATTGACGATATCCTTAGAACAAATGAGAATCTTGTAGCGAAGAGTGGTGCTAAATTGTTGCCTGGTCTACTTGAATACTCGAGACTTGTTGATGCTAACGCGCAGGAGCCATCTAATGGTCCTATCCATTCCGTTCAGTTTCATCGCAATGCTCAGTTACTGCTAGCTACTGGGTTGGATCGGAAGCTTCGATTTTTTCAGATTGATGGGAAACGGAATACCAAAATTCAGAGCATTTTTCTCGAGGATTGCCCCATACGAAAGGCATCATTTTTGCCTGATGGATCTCAGGTCATCATATCTGGGAGGCGAAAATTCTTCTATAGCCTTGATCTAGTGAAGGCAAAAGTAGATAAAATAGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTCATAGGTAATGAAGGTTATATCCTGTTAGTGTCGACCAAAACAAAGGAGCTCATCGGGACGCTTAAGATGAATGGAACTGTTCGTTCCTTGGCGTTTGCCGACGATGGACGACAGCTACTGAGCTCTGGCGGTGACGGGCAGGTCTACCACTGGGATTTGAGAACAAGAACGTGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGCACAGCACTTTGTACGTCTCCTAATGGAGCGTTGTTTGCAGCGGGTTCTGACAGTGGTATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAGGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTGGCAATCTGTTCAAGGATGAAGAAAAGTAGTTTGAAGCTGATACACGTTCCTTCTTTTACCATATTTTCGAACTGGCCGCCACCGAAGAAGAACCTTCAGTACCCGTCATGCTTGGATTTCAGCCCCGAAGGAGGCTACATGGCTGTCGGAAATGCTGCTGGAAAGGTATTATTGTATAAGCTACATCATTATCAGCATGCTTAGATTTGATATCCATAGGCTTAATCATAATGGATTGCTACAGTTTTGACACTTCTATTATTAGTTCTTACAATCAGCTGTTACTTCAGCAAAGTGTCTGAAGTTTGTACCTTGTTTACTTATTAAGAGTCTGTTCTTTTGTTAAAAGATTAGAACTTGATATTAAGCGATTCTTTGAACGACGTTGCTCATATCTACCTCTTATG

mRNA sequence

ATGTTTGAGGAAGGAGCTGAGTGGAAGATGAGTTTAATATCTCAAAATGTTGCTGTAATTAGTAGTACTGAGAATGTTAATGGGGATAATACTGTTGGCTCTTCATCTCTGTTGAGAAAAGTAGATGCTAGTGATGTAGAAAACTCTGGTGTAGATACTACCCGGTCAAAGAAGAGAAAGAAAGAACACAAAAAAGAAGATGAACAAATAGTAAAAGAACAACAAAAGGAAATGGAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGAAAAATGATTTCAGTGCTGAAGAAAAGGCTCCTGCTTTGTACATTATGGACCGCTCTGCAAATAATTCCCTTTCCGTGTATGAAAATGATGTTGGGCTCCTAGATGAGAGTTCGAGTAAGGAGGAAGCTCAGCAAAGAAAACCGGTATGGGTCGACGAGGAAGAGGAGAAGGCCTCAGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAAATCGATTTCGGGTTCAGAGTACGTGTCGCGACTGAGGGCTCAGCATGCCAAGCTAAACCCTGGAACCGAGTGGGCTCAACTTGATGCACAATCCAGGAGTGGCAGTGATGATGATGATGATCTATCATCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTTACGATAATGTCGATTCTATTGACGATATCCTTAGAACAAATGAGAATCTTGTAGCGAAGAGTGGTGCTAAATTGTTGCCTGGTCTACTTGAATACTCGAGACTTGTTGATGCTAACGCGCAGGAGCCATCTAATGGTCCTATCCATTCCGTTCAGTTTCATCGCAATGCTCAGTTACTGCTAGCTACTGGGTTGGATCGGAAGCTTCGATTTTTTCAGATTGATGGGAAACGGAATACCAAAATTCAGAGCATTTTTCTCGAGGATTGCCCCATACGAAAGGCATCATTTTTGCCTGATGGATCTCAGGTCATCATATCTGGGAGGCGAAAATTCTTCTATAGCCTTGATCTAGTGAAGGCAAAAGTAGATAAAATAGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTCATAGGTAATGAAGGTTATATCCTGTTAGTGTCGACCAAAACAAAGGAGCTCATCGGGACGCTTAAGATGAATGGAACTGTTCGTTCCTTGGCGTTTGCCGACGATGGACGACAGCTACTGAGCTCTGGCGGTGACGGGCAGGTCTACCACTGGGATTTGAGAACAAGAACGTGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGCACAGCACTTTGTACGTCTCCTAATGGAGCGTTGTTTGCAGCGGGTTCTGACAGTGGTATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAGGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTGGCAATCTGTTCAAGGATGAAGAAAAGTAGTTTGAAGCTGATACACGTTCCTTCTTTTACCATATTTTCGAACTGGCCGCCACCGAAGAAGAACCTTCAGTACCCGTCATGCTTGGATTTCAGCCCCGAAGGAGGCTACATGGCTGTCGGAAATGCTGCTGGAAAGGTATTATTGTATAAGCTACATCATTATCAGCATGCTTAGATTTGATATCCATAGGCTTAATCATAATGGATTGCTACAGTTTTGACACTTCTATTATTAGTTCTTACAATCAGCTGTTACTTCAGCAAAGTGTCTGAAGTTTGTACCTTGTTTACTTATTAAGAGTCTGTTCTTTTGTTAAAAGATTAGAACTTGATATTAAGCGATTCTTTGAACGACGTTGCTCATATCTACCTCTTATG

Coding sequence (CDS)

ATGTTTGAGGAAGGAGCTGAGTGGAAGATGAGTTTAATATCTCAAAATGTTGCTGTAATTAGTAGTACTGAGAATGTTAATGGGGATAATACTGTTGGCTCTTCATCTCTGTTGAGAAAAGTAGATGCTAGTGATGTAGAAAACTCTGGTGTAGATACTACCCGGTCAAAGAAGAGAAAGAAAGAACACAAAAAAGAAGATGAACAAATAGTAAAAGAACAACAAAAGGAAATGGAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGAAAAATGATTTCAGTGCTGAAGAAAAGGCTCCTGCTTTGTACATTATGGACCGCTCTGCAAATAATTCCCTTTCCGTGTATGAAAATGATGTTGGGCTCCTAGATGAGAGTTCGAGTAAGGAGGAAGCTCAGCAAAGAAAACCGGTATGGGTCGACGAGGAAGAGGAGAAGGCCTCAGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAAATCGATTTCGGGTTCAGAGTACGTGTCGCGACTGAGGGCTCAGCATGCCAAGCTAAACCCTGGAACCGAGTGGGCTCAACTTGATGCACAATCCAGGAGTGGCAGTGATGATGATGATGATCTATCATCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTTACGATAATGTCGATTCTATTGACGATATCCTTAGAACAAATGAGAATCTTGTAGCGAAGAGTGGTGCTAAATTGTTGCCTGGTCTACTTGAATACTCGAGACTTGTTGATGCTAACGCGCAGGAGCCATCTAATGGTCCTATCCATTCCGTTCAGTTTCATCGCAATGCTCAGTTACTGCTAGCTACTGGGTTGGATCGGAAGCTTCGATTTTTTCAGATTGATGGGAAACGGAATACCAAAATTCAGAGCATTTTTCTCGAGGATTGCCCCATACGAAAGGCATCATTTTTGCCTGATGGATCTCAGGTCATCATATCTGGGAGGCGAAAATTCTTCTATAGCCTTGATCTAGTGAAGGCAAAAGTAGATAAAATAGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTCATAGGTAATGAAGGTTATATCCTGTTAGTGTCGACCAAAACAAAGGAGCTCATCGGGACGCTTAAGATGAATGGAACTGTTCGTTCCTTGGCGTTTGCCGACGATGGACGACAGCTACTGAGCTCTGGCGGTGACGGGCAGGTCTACCACTGGGATTTGAGAACAAGAACGTGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGCACAGCACTTTGTACGTCTCCTAATGGAGCGTTGTTTGCAGCGGGTTCTGACAGTGGTATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAGGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTGGCAATCTGTTCAAGGATGAAGAAAAGTAGTTTGAAGCTGATACACGTTCCTTCTTTTACCATATTTTCGAACTGGCCGCCACCGAAGAAGAACCTTCAGTACCCGTCATGCTTGGATTTCAGCCCCGAAGGAGGCTACATGGCTGTCGGAAATGCTGCTGGAAAGGTATTATTGTATAAGCTACATCATTATCAGCATGCTTAG

Protein sequence

MFEEGAEWKMSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA

Homology

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BLAST of CmaCh19G000570 vs. ExPASy Swiss-Prot
Match: Q9FMU5 (U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14050 PE=1 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 5.4e-192
Identity = 354/546 (64.84%), Postives = 424/546 (77.66%), Query Frame = 0


Query: 42  DASDVENSGV--DTTRSKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDE 101
           D  D E  G   D TR K+RK E  KE +++ + +  EM+KLEN +FGSLYSPV FGK+E
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTE--KEKQKLEESELVEMKKLENLIFGSLYSPVTFGKEE 83

Query: 102 EKNDFSAEEKAPALYIMDRSANNSLSVYENDVGLLDESSSKEEAQ-----QRKPVWVDEE 161
                  EE   AL+ +DRSA   +  YE+D    +E S +E  Q     + +  W DEE
Sbjct: 84  -------EEDGSALFHVDRSAVRQIPDYEDDGDDDEELSDEENGQVVAIRKGEAAWEDEE 143

Query: 162 EEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRSGSD 221
           E++ +V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q   G  
Sbjct: 144 EKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGES 203

Query: 222 DDDDLSSDDENAVALADGYDNVDSIDDILRTNENLVAKS-GAKLLPGLLEYSRLVDANAQ 281
            DDD + D                +DDILRTNE+LV KS G KL  G LEYS+LVDANA 
Sbjct: 204 SDDDDTQD--------------GGVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAA 263

Query: 282 EPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDG 341
           +PSNGPI+SV FH+NAQLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+G
Sbjct: 264 DPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNG 323

Query: 342 SQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLV 401
           SQVI+SGRRKFFYS DL KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLV
Sbjct: 324 SQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLV 383

Query: 402 STKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCING 461
           STKTKELIGTLKMNG+VRSLAF++DG+ LLSSGGDGQVY WDLRT  C++K VDEG   G
Sbjct: 384 STKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCG 443

Query: 462 TALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILA 521
           T+LC+S NGALFA+G+D GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILA
Sbjct: 444 TSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILA 503

Query: 522 ICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKL 580
           I S M K+S+KL+HVPS T+FSNWPPP   + YP CLDFSP  G+MA+GNAAGKVLLYKL
Sbjct: 504 IVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKL 546

[Close]

BLAST of CmaCh19G000570 vs. ExPASy Swiss-Prot
Match: Q9Y5J1 (U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=UTP18 PE=1 SV=3)

HSP 1 Score: 307.0 bits (785), Expect = 4.6e-82
Identity = 180/438 (41.10%), Postives = 255/438 (58.22%), Query Frame = 0


Query: 145 QRKPVWVDEEEEKASVNITNVSRLRK-LRKEEDEKSISGSEYVSRLRA--QHAKLNPGTE 204
           Q+KPVWVDEE+E   +     +R RK + K   E  +S      RL+   QHA +     
Sbjct: 137 QKKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKKRLKEEFQHA-MGGVPA 196

Query: 205 WAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENLVAKSGAKLLPGL 264
           WA+   +  S     DD S +DE               DD+L+   N ++ S   L  G+
Sbjct: 197 WAETTKRKTS----SDDESEEDE---------------DDLLQRTGNFISTS-TSLPRGI 256

Query: 265 LEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLED 324
           L+      ANA+ P+   I SVQFH  AQ+++  GLD  +  FQ+DGK N KIQSI+LE 
Sbjct: 257 LKMKNCQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLFQVDGKTNPKIQSIYLER 316

Query: 325 CPIRKASFLPDGSQVI-ISGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSST 384
            PI KA F  +G +V+  S   K  Y  D++  K+  +  + G +EK +  FEVSPD S 
Sbjct: 317 FPIFKACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKEKIVRSFEVSPDGSF 376

Query: 385 VAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQVYHWDLRTRT 444
           +   G  GY+ L++ KTKELIG++K+NG V +  F+ D +++ +S GDG+VY WD+ +R 
Sbjct: 377 LLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNSRK 436

Query: 445 CIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFL-GGKKKPLKAIENLTTK 504
           C+++ VDEG + G ++ TS NG   A GS+ G+VNIYN+   L     KP+KAI NL T 
Sbjct: 437 CLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKAIMNLVTG 496

Query: 505 VDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPK-KNLQYPSCLDFSPEGGY 564
           V  L FN   +ILAI S   K +++L+H+PS T+FSN+P  K KN+ +   +DFSP  GY
Sbjct: 497 VTSLTFNPTTEILAIASEKMKEAVRLVHLPSCTVFSNFPVIKNKNISHVHTMDFSPRSGY 553

Query: 565 MAVGNAAGKVLLYKLHHY 577
            A+GN  GK L+Y+LHHY
Sbjct: 557 FALGNEKGKALMYRLHHY 553

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BLAST of CmaCh19G000570 vs. ExPASy Swiss-Prot
Match: Q5SSI6 (U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.5e-80
Identity = 179/476 (37.61%), Postives = 277/476 (58.19%), Query Frame = 0


Query: 107 EEKAPALYIMDRSANNSLSVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVS 166
           E+   AL    RS+   L    ++  + +E+      ++++PVWVDE++E   +   + +
Sbjct: 94  EDDEDALLQRLRSSRGQLHGSSDESEVENEAKDIFSQKKKQPVWVDEDDEDEEIVDMSNN 153

Query: 167 RLRK-LRKEEDEKSISGSEYVSRLRA--QHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDD 226
           R RK + K   E  +S  +   RL+   QHA +    +WA+  ++ R+ SDD+   S +D
Sbjct: 154 RFRKDIMKNASESKLSKDKLQKRLKEEFQHA-MGGVPDWAEAGSKRRTSSDDE---SEED 213

Query: 227 ENAVALADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSV 286
           E               DD+L+   N ++ S   L  G+L+      ANA+ P+   I SV
Sbjct: 214 E---------------DDLLQRTGNFISTS-TSLPRGILKMKNCRPANAERPTTARISSV 273

Query: 287 QFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVI-ISGRR 346
           QFH  AQ+++ +G+D  +  FQ+DGK N KIQSI+LE  PI KA F  +G +V+  S   
Sbjct: 274 QFHPGAQVVMVSGVDNAISLFQVDGKTNPKIQSIYLEKFPIFKACFSANGEEVLATSMHS 333

Query: 347 KFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIG 406
           K  Y  D++  K+  +  + G +EK+++ FEVSPD S +   G  G+  L+S KTKELIG
Sbjct: 334 KVLYVYDMLAGKLIPVHQVRGLKEKTVKQFEVSPDGSFLLISGIAGFSHLLSMKTKELIG 393

Query: 407 TLKMNGTVRSLAFADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNG 466
           ++K+NG + +  F+ D +++ +   +G+VY WD+ +R C+++ +DEG + G ++  S NG
Sbjct: 394 SMKINGRIAASTFSSDSKRIYTYSENGEVYVWDVNSRKCMNRFLDEGSLCGLSIAASKNG 453

Query: 467 ALFAAGSDSGIVNIYNRQEFL-GGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKS 526
              A GS SG+VNIYN+   L     KP+KAI NL T V  L FN   +ILA+ SR  K 
Sbjct: 454 QYVACGSKSGVVNIYNQDSCLQQTNPKPIKAIMNLVTGVTSLAFNPTTEILAVASRKMKE 513

Query: 527 SLKLIHVPSFTIFSNWPPPKKN-LQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY 577
           +++L+H+PS T+FSN+P  KK+ L     +DFSP GGY A+GN  G+ L+Y+LHHY
Sbjct: 514 AVRLVHLPSCTVFSNFPVFKKSTLSRVQTMDFSPRGGYFALGNEKGRALMYRLHHY 549

[Close]

BLAST of CmaCh19G000570 vs. ExPASy Swiss-Prot
Match: P78750 (Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.06 PE=2 SV=3)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-72
Identity = 175/530 (33.02%), Postives = 278/530 (52.45%), Query Frame = 0


Query: 73  EQQKEMEKLENFLFGSLYSPVEF-GKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN-- 132
           E+  E  +LEN +FG++ +   F  K+ E  D    E AP L   + +  + L   E+  
Sbjct: 2   EKDTEELELENAVFGNINNFSSFLDKENETFDVMMNE-APELSEDNDAQEDELEKLEDAE 61

Query: 133 ----DVGLLDESSSK---------------EEAQQRKP-VWVDEEEEKASVNITNVSRLR 192
               D G  D +                  EEA    P +W D ++E+  +++ + SRLR
Sbjct: 62  LFMFDTGSADGAKDSVPLDIIAGDNTVKEDEEASNEIPSIWEDSDDERLMISLQDHSRLR 121

Query: 193 KLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVAL 252
           KLR+ EDE  ++G +Y  RLR Q  ++ P  EWA+             D++ +++   AL
Sbjct: 122 KLRQYEDEDMVNGLQYARRLRTQFERVYPVPEWAK-----------KQDVTEEEDEFNAL 181

Query: 253 ADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNA 312
           ++      S+  + +++ + + +S   L PG +   RL DAN Q PS+  I  +  H   
Sbjct: 182 SEKSVIPKSLKSLFKSSVSYINQSSKLLAPGTINIKRLKDANFQAPSHSGIRCMSIHPYF 241

Query: 313 QLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLD 372
            LLL  G DR LR +Q+DGK N  + S+ L    ++ A F PDG +VI +GRRK+ Y  D
Sbjct: 242 PLLLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSALQTALFHPDGKRVIAAGRRKYMYIWD 301

Query: 373 LVKAKVDKIGPLVGRE--EKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMN 432
           L  A+V K+  + G+E  + S+E F V P    +A  G  G+I L+   T +   + K+ 
Sbjct: 302 LESAQVQKVSRMYGQENFQPSMERFHVDPTGKYIALEGRSGHINLLHALTGQFATSFKIE 361

Query: 433 GTVRSLAFADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAA 492
           G +  + F  DG ++L      +V+H+++  R+ + +   +  ++ T  C  P+    A 
Sbjct: 362 GVLSDVLFTSDGSEMLVLSYGAEVWHFNVEQRSVVRRWQVQDGVSTTHFCLDPSNKYLAI 421

Query: 493 GSDSGIVNIYNRQ-EFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLI 552
           GS SGIVNIY+ Q        KP+  ++N+T  ++ + F+ D+Q+LAI SR KK +L+L+
Sbjct: 422 GSKSGIVNIYDLQTSNADAAPKPVTTLDNITFSINSMSFSQDSQVLAIASRGKKDTLRLV 481

Query: 553 HVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY 577
           HVPSF++F NWP     L   +CL F  +GG + VGN AG+V L+KL HY
Sbjct: 482 HVPSFSVFRNWPTSATPLGRVTCLAFG-KGGELCVGNEAGRVGLWKLAHY 518

[Close]

BLAST of CmaCh19G000570 vs. ExPASy Swiss-Prot
Match: P40362 (U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP18 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.6e-56
Identity = 182/559 (32.56%), Postives = 282/559 (50.45%), Query Frame = 0


Query: 83  NFLFGSLYSPVEFGKDE-EKNDFSAEEKA----------PALYIMDRSAN-NSLSVYEN- 142
           +F+F      VE  +DE  ++D S E++A            L+ +D   N +S    E+ 
Sbjct: 43  DFIFNEQEMDVEDQEDEGSESDNSEEDEAQNGELDHVNNDQLFFVDDGGNEDSQDKNEDT 102

Query: 143 -DVGLLDESSSKEEAQ-QRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVS 202
            DV   D+SSS + ++   +  W+D ++EK  V I   ++ +KLR   +E  I+G  Y++
Sbjct: 103 MDVDDEDDSSSDDYSEDSEEAAWIDSDDEKIKVPILVTNKTKKLRTSYNESKINGVHYIN 162

Query: 203 RLRAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNE 262
           RLR+Q  K+ P  +W  +D +S S  DD++D   +  N V   D    ++++  IL T  
Sbjct: 163 RLRSQFEKIYPRPKW--VDDESDSELDDEEDDEEEGSNNVINGD----INALTKILSTTY 222

Query: 263 NLV-AKSGAKLL-PGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQ 322
           N     S +KLL P  L+  RL DANA  PS+  I S+ FH +  LLL  G D+ LR + 
Sbjct: 223 NYKDTLSNSKLLPPKKLDIVRLKDANASHPSHSAIQSLSFHPSKPLLLTGGYDKTLRIYH 282

Query: 323 IDGKRNTKIQSIFLEDCPIRKASFLPDGS-----QVIISGRRKFFYSLDL--------VK 382
           IDGK N  + S+ L   PI+  +F    S      +  +GRR++ +S DL          
Sbjct: 283 IDGKTNHLVTSLHLVGSPIQTCTFYTSLSNQNQQNIFTAGRRRYMHSWDLSLENLTHSQT 342

Query: 383 AKVDKIGPLVGRE--EKSLEVFEVS--PDSST------VAFIGNEGYI-LLVSTKTKELI 442
           AK++K   L G E  ++S E F+V+   +S T      V   GN G+I +L ST    L+
Sbjct: 343 AKIEKFSRLYGHESTQRSFENFKVAHLQNSQTNSVHGIVLLQGNNGWINILHSTSGLWLM 402

Query: 443 GTLKMNGTV-------RSLAFADDGRQLLSSGGDGQVYHWDL-RTRTCIHKAVDEG---- 502
           G  K+ G +       + ++       L++    G+V+ +DL +    I +  D+G    
Sbjct: 403 G-CKIEGVITDFCIDYQPISRGKFRTILIAVNAYGEVWEFDLNKNGHVIRRWKDQGGVGI 462

Query: 503 ---CINGTALCTSP--------NGALFAAGSDSGIVNIYNRQEFL-GGKKKPLKAIENLT 562
               + G    T P             A GS+SG VN+Y+R   +      P+ A++ LT
Sbjct: 463 TKIQVGGGTTTTCPALQISKIKQNRWLAVGSESGFVNLYDRNNAMTSSTPTPVAALDQLT 522

Query: 563 TKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGG 577
           T +  L+F+ D QIL + SR  K +L+L+H+PS ++FSNWP     L   + + FSP GG
Sbjct: 523 TTISNLQFSPDGQILCMASRAVKDALRLVHLPSCSVFSNWPTSGTPLGKVTSVAFSPSGG 582

[Close]

BLAST of CmaCh19G000570 vs. ExPASy TrEMBL
Match: A0A6J1HWX2 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466993 PE=4 SV=1)

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 0


Query: 10  MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 69
           MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 60

Query: 70  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 129
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 130 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 189
           DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 190 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 249
           RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 250 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 309
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 310 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 369
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 370 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 429
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 430 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 489
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 490 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 549
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 550 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of CmaCh19G000570 vs. ExPASy TrEMBL
Match: A0A6J1HKC7 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463814 PE=4 SV=1)

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 557/570 (97.72%), Postives = 560/570 (98.25%), Query Frame = 0


Query: 10  MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 69
           MSLISQNVAVISS E V  DNTV SSS LRKVDASDVENSGVDTTR+KKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 60

Query: 70  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 129
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 120

Query: 130 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 189
           DVGLLDESS+KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 190 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 249
           RAQHAKLNPGTEWAQLDAQSR GSDDDDDL+SDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 250 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 309
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 310 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 369
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 370 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 429
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 430 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 489
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 490 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 549
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 550 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of CmaCh19G000570 vs. ExPASy TrEMBL
Match: A0A1S3C7I9 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=LOC103497366 PE=4 SV=1)

HSP 1 Score: 997.3 bits (2577), Expect = 2.7e-287
Identity = 510/570 (89.47%), Postives = 540/570 (94.74%), Query Frame = 0


Query: 10  MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 69
           MSLISQNVAVISS E    +NT+G SS LR  DAS+V+ SG+DT+R+KKRKKEH+KEDEQ
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 70  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 129
           +V+EQQKEM KLENFLFGSLYSPVEFGKDEE+N F++EEK PALYIMDRSA+NSLS YE+
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 130 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 189
           D  +LDES++KEE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEEDE SISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 190 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 249
           RAQHAKLNPGTEWAQLDAQSR G  DDDD+ SDDENAVALA GYDNVDSIDDILRT+ENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSR-GDSDDDDILSDDENAVALAGGYDNVDSIDDILRTSENL 240

Query: 250 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 309
           V KSG KL+PGLL YSRLVDANA+EPSNGPI+SVQFHRN+QLLLATGLDRKLRFFQIDGK
Sbjct: 241 VVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGK 300

Query: 310 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 369
           RNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 370 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 429
           E FEVSPDSST+AFIGNEGYILLVS KTKELIGTLKMNG+VRSLAFADDGRQLLSSGGDG
Sbjct: 361 EAFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDG 420

Query: 430 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 489
           Q+YHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QIYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 490 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 549
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIH+PSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSC 540

Query: 550 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 569

[Close]

BLAST of CmaCh19G000570 vs. ExPASy TrEMBL
Match: A0A6J1ET16 (U3 small nucleolar RNA-associated protein 18 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437464 PE=4 SV=1)

HSP 1 Score: 989.6 bits (2557), Expect = 5.6e-285
Identity = 511/571 (89.49%), Postives = 535/571 (93.70%), Query Frame = 0


Query: 10  MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 69
           MSLISQ+VA IS+ E V G+  VGSSS LR +DASDVE SG DTTR KKRKKEHKKED Q
Sbjct: 1   MSLISQSVAAISNLEKVTGETIVGSSSPLRNLDASDVEMSGADTTRPKKRKKEHKKEDAQ 60

Query: 70  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEK-APALYIMDRSANNSLSVYE 129
           +VKEQQ+EM+ LENFLFGSLYSPVEFGK EE N  S EEK APALYIMDRSAN+SLS YE
Sbjct: 61  LVKEQQQEMKNLENFLFGSLYSPVEFGKHEEVNGLSGEEKEAPALYIMDRSANSSLSAYE 120

Query: 130 NDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSR 189
            D GLLDES ++EE QQRKPVW+DEEEEKA+VNITNVSRLRKLRKEEDEKSISGSEYVSR
Sbjct: 121 GDFGLLDESVNEEEPQQRKPVWIDEEEEKATVNITNVSRLRKLRKEEDEKSISGSEYVSR 180

Query: 190 LRAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNEN 249
           LRAQHAKLNP TEWAQLD Q+R GS DDDDLSSDDENAV +ADGYD+VDSIDDILRT++N
Sbjct: 181 LRAQHAKLNPSTEWAQLDVQTRGGS-DDDDLSSDDENAVVMADGYDDVDSIDDILRTSDN 240

Query: 250 LVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDG 309
           LV KSG KLLPGLLEYSRLVDANA+EPSNGPIHSVQFHRNAQLLLATGLDR+LRFFQIDG
Sbjct: 241 LVEKSGGKLLPGLLEYSRLVDANAEEPSNGPIHSVQFHRNAQLLLATGLDRRLRFFQIDG 300

Query: 310 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKS 369
           KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYS DLVKAKVDKIGPLVGREEKS
Sbjct: 301 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSFDLVKAKVDKIGPLVGREEKS 360

Query: 370 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGD 429
           LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF D+GRQLLSSGGD
Sbjct: 361 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFTDNGRQLLSSGGD 420

Query: 430 GQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKK 489
           GQVYHWDLRTRTCIHK VDEGCINGTAL TSPNGALFAAGSDSGIVNIYNR+EFLGGKKK
Sbjct: 421 GQVYHWDLRTRTCIHKGVDEGCINGTALGTSPNGALFAAGSDSGIVNIYNREEFLGGKKK 480

Query: 490 PLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPS 549
           PLKAIENLTTKV+FLKFNHDAQILAICSRMKKSSLKLIHVPSFT FSNWPPPKKNLQYPS
Sbjct: 481 PLKAIENLTTKVEFLKFNHDAQILAICSRMKKSSLKLIHVPSFTTFSNWPPPKKNLQYPS 540

Query: 550 CLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           CLDFSPEGGYMAVGNAAGKVLLYKLHHY+HA
Sbjct: 541 CLDFSPEGGYMAVGNAAGKVLLYKLHHYRHA 570

[Close]

BLAST of CmaCh19G000570 vs. ExPASy TrEMBL
Match: A0A6J1K5W3 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490998 PE=4 SV=1)

HSP 1 Score: 982.2 bits (2538), Expect = 9.0e-283
Identity = 508/571 (88.97%), Postives = 533/571 (93.35%), Query Frame = 0


Query: 10  MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 69
           MSLISQNVA ISS E V G+  V SSS LR +DASDVE SG DTTR KKRKKEHKKED Q
Sbjct: 1   MSLISQNVAAISSLEKVTGETIVASSSPLRNLDASDVEISGADTTRPKKRKKEHKKEDAQ 60

Query: 70  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEK-APALYIMDRSANNSLSVYE 129
           +VKEQQ++M+KLENFLFGSLYSP EFGK EE N  S EEK APALYIMDRSAN+SLS YE
Sbjct: 61  LVKEQQQKMKKLENFLFGSLYSPAEFGKHEEVNGLSGEEKEAPALYIMDRSANSSLSAYE 120

Query: 130 NDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSR 189
            D GLLDES ++EE QQRKPVW+DEEEEKA+VNITNVSRLRKLRKEEDEKSISGSEYVSR
Sbjct: 121 GDFGLLDESVNEEEPQQRKPVWIDEEEEKATVNITNVSRLRKLRKEEDEKSISGSEYVSR 180

Query: 190 LRAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNEN 249
           LRAQHAKLNP TEWAQLD Q+ SG  DDDDLSSDDENAV +ADG+D+VDSIDDILRT++N
Sbjct: 181 LRAQHAKLNPSTEWAQLDVQT-SGGSDDDDLSSDDENAVVMADGHDDVDSIDDILRTSDN 240

Query: 250 LVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDG 309
           LV KSG KLLPGLLEYSRLVDANA+EPSNGPIHSVQFHRNAQLLLATGLDR+LRFFQIDG
Sbjct: 241 LVEKSGGKLLPGLLEYSRLVDANAEEPSNGPIHSVQFHRNAQLLLATGLDRRLRFFQIDG 300

Query: 310 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKS 369
           KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGREEKS
Sbjct: 301 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKS 360

Query: 370 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGD 429
           LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF D+G QLLSSGGD
Sbjct: 361 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFTDNGFQLLSSGGD 420

Query: 430 GQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKK 489
           GQVYHWDLRTRTCIHK VDEGCINGTAL TSPNGALFAAGSDSGIVNIYNR+EFLGGKKK
Sbjct: 421 GQVYHWDLRTRTCIHKGVDEGCINGTALGTSPNGALFAAGSDSGIVNIYNREEFLGGKKK 480

Query: 490 PLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPS 549
           P+KAIENLTTKV+FLKFNHDAQILAICSRMKKSSLKLIHVPSFT FSNWPPPKKNLQYPS
Sbjct: 481 PMKAIENLTTKVEFLKFNHDAQILAICSRMKKSSLKLIHVPSFTTFSNWPPPKKNLQYPS 540

Query: 550 CLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           CLDFSPEGGYMAVGNAAGKVLLYKLHHY+HA
Sbjct: 541 CLDFSPEGGYMAVGNAAGKVLLYKLHHYRHA 570

[Close]

BLAST of CmaCh19G000570 vs. NCBI nr
Match: XP_022967509.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita maxima])

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 0


Query: 10  MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 69
           MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 60

Query: 70  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 129
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 130 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 189
           DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 190 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 249
           RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 250 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 309
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 310 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 369
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 370 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 429
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 430 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 489
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 490 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 549
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 550 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of CmaCh19G000570 vs. NCBI nr
Match: XP_023511721.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1097.0 bits (2836), Expect = 0.0e+00
Identity = 565/570 (99.12%), Postives = 567/570 (99.47%), Query Frame = 0


Query: 10  MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 69
           MSLISQNVAVISSTE VNGDNTVGSSSLLRKVDASDVENSG DTTR+KKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 60

Query: 70  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 129
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 130 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 189
           DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 190 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 249
           RAQHAKLNPGTEWAQLDAQSR GSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 250 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 309
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 310 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 369
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 370 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 429
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDG+QLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 420

Query: 430 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 489
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 490 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 549
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 550 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of CmaCh19G000570 vs. NCBI nr
Match: KAG7011246.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1083.2 bits (2800), Expect = 0.0e+00
Identity = 560/578 (96.89%), Postives = 565/578 (97.75%), Query Frame = 0


Query: 2   FEEGAEWKMSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKK 61
           F  GAEWKMSLISQNVAVISS E V  DNTV SSS LRKVDASDVENSGVDTTR+KKRKK
Sbjct: 120 FTIGAEWKMSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKK 179

Query: 62  EHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSAN 121
           EHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSAN
Sbjct: 180 EHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSAN 239

Query: 122 NSLSVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSIS 181
           NSLSVYENDVGLLDESS KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSIS
Sbjct: 240 NSLSVYENDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSIS 299

Query: 182 GSEYVSRLRAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDD 241
           GSEYVSRLRAQHAKLNPGTEWAQLDAQSR GSDDDDDL+SDDENAVALADGYDNVDSIDD
Sbjct: 300 GSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDD 359

Query: 242 ILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKL 301
           ILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEP+NGPIHSVQFHRNAQLLLATGLDRKL
Sbjct: 360 ILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKL 419

Query: 302 RFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPL 361
           RFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPL
Sbjct: 420 RFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPL 479

Query: 362 VGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQ 421
           VGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFAD+GRQ
Sbjct: 480 VGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQ 539

Query: 422 LLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQE 481
           LLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQE
Sbjct: 540 LLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQE 599

Query: 482 FLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPK 541
           FLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPK
Sbjct: 600 FLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPK 659

Query: 542 KNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           KNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 660 KNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 697

[Close]

BLAST of CmaCh19G000570 vs. NCBI nr
Match: XP_022963504.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata])

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 557/570 (97.72%), Postives = 560/570 (98.25%), Query Frame = 0


Query: 10  MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 69
           MSLISQNVAVISS E V  DNTV SSS LRKVDASDVENSGVDTTR+KKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 60

Query: 70  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 129
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 120

Query: 130 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 189
           DVGLLDESS+KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 190 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 249
           RAQHAKLNPGTEWAQLDAQSR GSDDDDDL+SDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 250 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 309
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 310 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 369
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 370 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 429
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 430 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 489
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 490 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 549
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 550 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of CmaCh19G000570 vs. NCBI nr
Match: KAG6571483.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1059.7 bits (2739), Expect = 9.2e-306
Identity = 549/564 (97.34%), Postives = 554/564 (98.23%), Query Frame = 0


Query: 5   GAEWKMSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHK 64
           GAEWKMSLISQNVAVISS E V  DNTV SSS LRKVDASDVENSGVDTTR+KKRKKEHK
Sbjct: 191 GAEWKMSLISQNVAVISSIEKVIEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHK 250

Query: 65  KEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSL 124
           KEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSL
Sbjct: 251 KEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSL 310

Query: 125 SVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSE 184
           SVYENDVGLLDESS+KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSE
Sbjct: 311 SVYENDVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSE 370

Query: 185 YVSRLRAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILR 244
           YVSRLRAQHAKLNPGTEWAQLDAQSR GSDDDDDL+SDDENAVALADGYDNVDSIDDILR
Sbjct: 371 YVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILR 430

Query: 245 TNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFF 304
           TNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFF
Sbjct: 431 TNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFF 490

Query: 305 QIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGR 364
           QIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGR
Sbjct: 491 QIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGR 550

Query: 365 EEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLS 424
           EEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFAD+GRQLLS
Sbjct: 551 EEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLS 610

Query: 425 SGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLG 484
           SGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLG
Sbjct: 611 SGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLG 670

Query: 485 GKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNL 544
           GKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNL
Sbjct: 671 GKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNL 730

Query: 545 QYPSCLDFSPEGGYMAVGNAAGKV 569
           QYPSCLDFSPEGGYMAVGNAAGKV
Sbjct: 731 QYPSCLDFSPEGGYMAVGNAAGKV 754

[Close]

BLAST of CmaCh19G000570 vs. TAIR 10
Match: AT5G14050.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 672.2 bits (1733), Expect = 3.8e-193
Identity = 354/546 (64.84%), Postives = 424/546 (77.66%), Query Frame = 0


Query: 42  DASDVENSGV--DTTRSKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDE 101
           D  D E  G   D TR K+RK E  KE +++ + +  EM+KLEN +FGSLYSPV FGK+E
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTE--KEKQKLEESELVEMKKLENLIFGSLYSPVTFGKEE 83

Query: 102 EKNDFSAEEKAPALYIMDRSANNSLSVYENDVGLLDESSSKEEAQ-----QRKPVWVDEE 161
                  EE   AL+ +DRSA   +  YE+D    +E S +E  Q     + +  W DEE
Sbjct: 84  -------EEDGSALFHVDRSAVRQIPDYEDDGDDDEELSDEENGQVVAIRKGEAAWEDEE 143

Query: 162 EEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRSGSD 221
           E++ +V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q   G  
Sbjct: 144 EKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGES 203

Query: 222 DDDDLSSDDENAVALADGYDNVDSIDDILRTNENLVAKS-GAKLLPGLLEYSRLVDANAQ 281
            DDD + D                +DDILRTNE+LV KS G KL  G LEYS+LVDANA 
Sbjct: 204 SDDDDTQD--------------GGVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAA 263

Query: 282 EPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDG 341
           +PSNGPI+SV FH+NAQLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+G
Sbjct: 264 DPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNG 323

Query: 342 SQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLV 401
           SQVI+SGRRKFFYS DL KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLV
Sbjct: 324 SQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLV 383

Query: 402 STKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCING 461
           STKTKELIGTLKMNG+VRSLAF++DG+ LLSSGGDGQVY WDLRT  C++K VDEG   G
Sbjct: 384 STKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCG 443

Query: 462 TALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILA 521
           T+LC+S NGALFA+G+D GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILA
Sbjct: 444 TSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILA 503

Query: 522 ICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKL 580
           I S M K+S+KL+HVPS T+FSNWPPP   + YP CLDFSP  G+MA+GNAAGKVLLYKL
Sbjct: 504 IVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKL 546

The following BLAST results are available for this feature:

BLAST of CmaCh19G000570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMU5	5.4e-192	64.84	U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=...	[more]
Q9Y5J1	4.6e-82	41.10	U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=...	[more]
Q5SSI6	1.5e-80	37.61	U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN...	[more]
P78750	1.5e-72	33.02	Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pom...	[more]
P40362	9.6e-56	32.56	U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain...	[more]

BLAST of CmaCh19G000570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HWX2	0.0e+00	100.00	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]
A0A6J1HKC7	0.0e+00	97.72	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=36...	[more]
A0A1S3C7I9	2.7e-287	89.47	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1ET16	5.6e-285	89.49	U3 small nucleolar RNA-associated protein 18 homolog isoform X1 OS=Cucurbita mos...	[more]
A0A6J1K5W3	9.0e-283	88.97	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]

BLAST of CmaCh19G000570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967509.1	0.0e+00	100.00	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita maxima]	[more]
XP_023511721.1	0.0e+00	99.12	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo...	[more]
KAG7011246.1	0.0e+00	96.89	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]
XP_022963504.1	0.0e+00	97.72	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata]	[more]
KAG6571483.1	9.2e-306	97.34	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]

BLAST of CmaCh19G000570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14050.1	3.8e-193	64.84	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..223
None	No IPR available	PANTHER	PTHR18359:SF0	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 18 HOMOLOG	coord: 53..578
None	No IPR available	PANTHER	PTHR18359	WD-REPEAT PROTEIN-RELATED	coord: 53..578
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 403..438 score: 9.045603
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 266..305 e-value: 4.7 score: 12.8 coord: 530..572 e-value: 17.0 score: 9.2 coord: 438..478 e-value: 1.7 score: 15.5 coord: 397..435 e-value: 1.3E-6 score: 38.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 401..435 e-value: 0.0082 score: 17.0 coord: 451..478 e-value: 0.032 score: 15.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 403..444 score: 11.611251
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 255..574 e-value: 3.9E-107 score: 360.4
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 276..573

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000570.1	CmaCh19G000570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding