CmaCh19G000560 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G000560
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Auxin-responsive protein
Location	Cma_Chr19: 307896 .. 309811 (+)
RNA-Seq Expression	CmaCh19G000560
Synteny	CmaCh19G000560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAGAACAGACATAGTCACCAAGCTCTCAAAGCGAAGGAAACGATGTCGTTTGAGGAGACAGAGCTGAGGCTAGGGTTGCCTGGAAAGAATGGGAGTTCGGAAGTGACAAGGAAGAGAGGGTTCCATGAGGAGTCAGCTGCTGAAACAATTATTTCATCTCACAATACAAATCACAAGCCTCCCCTACCCAAGTAAGTTCTACTTCATCTTTTAGAGTTCGAGTAACGTTTTCTTAGGGTCAACAACGTAAATCACCACTGAATCGAAAAGCTTAAACATATAGATTACCGTAAACCGAACATATCAATACTTCAATGTTCTTTCCAGAGTTTGTGGACGTAAAAGTTTGTAGAACGTTAAATAAGTAGAAAACGATCTTAACTGGAGGTCAGAACGCATACGGATTGGATTGAGTTGAGTTGAGAGAATTTTTTGAACCAACTCGAAATTTCAGGTTGGTTAAGTTGATGACCCGAGCAACTCGAATAGAGTTCATTACTCAATCCAACCCTCTATTTTCGGGTTAGGTTGGATTGGGTTATTTTTTTTAGTTATTTTATATTTGTCCACGATACATATTACATTAATAATTAAAATTTCATAAAATTCAAATATCAAATGATCACAAGTCATAAGGTAACAAACATCAAATATTCATAATAATTTTAAAACTAATCCAACCCAATTTTTATTGCTTGAGTGAGTCCAAATTAATCGAATTATCAAGTCATATAAGCACCCCTAATTAGAGGAAGATAAATGGCATTATAGAGGTTTGATTACGTATAAGACCTCTAACTCTGTCCCTTAACGAGATTACTTTAACACAACCCGTGTGCTTACTTAACCTTATGGGTTGATCGAGAATGTCGAGTAATATTGTTGTTGTGAGCTTTGTAGGGCACTAGTGGTAGGTTGGCCACCAATAAGGTCGTACAGAAAAAACAGTCTGGCCCTCCGAAAGGGTAGCAACGAGGAAGAAAACGAGGAGGTGGTGCTAATTAGTAGGAATAAGAATGGAAATATCGGAGCAGCTAGGTTGGTGAAGGTTAGCCTTGATGGTGCACCTTATCTTCGCAAAGTCGACTTGACCATGTACAACAGCTACAAACAACTCTCCCATGCCCTAGCCAAATTCTTCGGTGCCTTCACCATTGGTATTTAACGGGTCTCGAAATATTAGAAACTAGACGTGTAATTTAACATAATTTACAGAAATAAGACGAAATTTAATGATTTTTTTTTTTTTTTCATTTTCCCCGACTCTAGGTCACTGTGGATCCCAAGCAGTTGGGATGAAAGACTTCATGAATGAAAGCAAACTAATAGATCTTTTAAATGATTCGGACTACATTCCAACCTACCAAGACAAGGACGGTGATTGGATGCTCGTCGGTGATGTTCCATGGCAGTAAGTGATAATTATCTAGAATTTTTAAATATTTTATTTTAGTCTTCCAATGGTGAAAATCTACTATAATTCAAGATTTGATTAAAAAGTAAAACCGTACCAAATTTTTGCTAAATCCACCGTGAAACATGCAAGAAATAACTCGAGTATAATACGTCTCCCAATATCCATACAAGATGTTTGTTGAATCTTGCAAACGTTTACGTATAATGAAAGGAAAGGAAGCCATTGACCTTAGTAAGATTGATAGATTTGTGTGTTTTCAGTATCGGTGAACGCAGAGATTTGAATTTATCGAACATATTGTTTTAACCATTTGAGTTATGTTTAGGTTAACATTACCCGAAACAAGTCCTAATTTATATCATTAACATATTGGGACGTTTTTTTTTTTTTTTTTTTTGGTGGGGTTTATCAGCACCAAGGGCTGTAGAGAAATGCAAGAACTCCAAGAACTAACTTCACCTTTGATATGGGCAAGGCATGCTAATTGGTTGGTGTGA

mRNA sequence

CCAAGAACAGACATAGTCACCAAGCTCTCAAAGCGAAGGAAACGATGTCGTTTGAGGAGACAGAGCTGAGGCTAGGGTTGCCTGGAAAGAATGGGAGTTCGGAAGTGACAAGGAAGAGAGGGTTCCATGAGGAGTCAGCTGCTGAAACAATTATTTCATCTCACAATACAAATCACAAGCCTCCCCTACCCAAGGCACTAGTGGTAGGTTGGCCACCAATAAGGTCGTACAGAAAAAACAGTCTGGCCCTCCGAAAGGGTAGCAACGAGGAAGAAAACGAGGAGGTGGTGCTAATTAGTAGGAATAAGAATGGAAATATCGGAGCAGCTAGGTTGGTGAAGGTTAGCCTTGATGGTGCACCTTATCTTCGCAAAGTCGACTTGACCATGTACAACAGCTACAAACAACTCTCCCATGCCCTAGCCAAATTCTTCGGTGCCTTCACCATTGGTCACTGTGGATCCCAAGCAGTTGGGATGAAAGACTTCATGAATGAAAGCAAACTAATAGATCTTTTAAATGATTCGGACTACATTCCAACCTACCAAGACAAGGACGGTGATTGGATGCTCGTCGGTGATGTTCCATGGCACACCAAGGGCTGTAGAGAAATGCAAGAACTCCAAGAACTAACTTCACCTTTGATATGGGCAAGGCATGCTAATTGGTTGGTGTGA

Coding sequence (CDS)

ATGTCGTTTGAGGAGACAGAGCTGAGGCTAGGGTTGCCTGGAAAGAATGGGAGTTCGGAAGTGACAAGGAAGAGAGGGTTCCATGAGGAGTCAGCTGCTGAAACAATTATTTCATCTCACAATACAAATCACAAGCCTCCCCTACCCAAGGCACTAGTGGTAGGTTGGCCACCAATAAGGTCGTACAGAAAAAACAGTCTGGCCCTCCGAAAGGGTAGCAACGAGGAAGAAAACGAGGAGGTGGTGCTAATTAGTAGGAATAAGAATGGAAATATCGGAGCAGCTAGGTTGGTGAAGGTTAGCCTTGATGGTGCACCTTATCTTCGCAAAGTCGACTTGACCATGTACAACAGCTACAAACAACTCTCCCATGCCCTAGCCAAATTCTTCGGTGCCTTCACCATTGGTCACTGTGGATCCCAAGCAGTTGGGATGAAAGACTTCATGAATGAAAGCAAACTAATAGATCTTTTAAATGATTCGGACTACATTCCAACCTACCAAGACAAGGACGGTGATTGGATGCTCGTCGGTGATGTTCCATGGCACACCAAGGGCTGTAGAGAAATGCAAGAACTCCAAGAACTAACTTCACCTTTGATATGGGCAAGGCATGCTAATTGGTTGGTGTGA

Protein sequence

MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDVPWHTKGCREMQELQELTSPLIWARHANWLV

Homology

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BLAST of CmaCh19G000560 vs. ExPASy Swiss-Prot
Match: P13089 (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-49
Identity = 115/231 (49.78%), Postives = 137/231 (59.31%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEV-TRKRGF------HEESAAETI----------------- 60
           M FEETELRLGLPG  G+ EV  RKRGF      HE+ +A T+                 
Sbjct: 1   MGFEETELRLGLPGNGGTEEVLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTAAA 60

Query: 61  ----ISSHNTNHK----------PPLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVV 120
                  H T  K           P  K  VVGWPP+RS+RKN LA++K   EE      
Sbjct: 61  AADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEES----- 120

Query: 121 LISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQA 180
              +N + N   A  VKVS+DGAPYLRKVDL MY SY++LS +L K F +FT G+C SQ 
Sbjct: 121 --EKNSSPN---ASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQ- 180

Query: 181 VGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDVPWH--TKGCREMQ 192
            GMKDFMNESKL DLLN SDY+PTY+DKDGDWMLVGDVPW    + C+ ++
Sbjct: 181 -GMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLR 219

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BLAST of CmaCh19G000560 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44
Identity = 101/204 (49.51%), Postives = 129/204 (63.24%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEV----TRKRGFHE-------------ESAAETIISSHNTN 60
           ++FE TELRLGLPG N   E+      KRGF E             +S ++  + +    
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 61  HKPPLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAA-----RLV 120
              P  KA VVGWPP+RS+RKN ++ +K +  +  E     S +      A+       V
Sbjct: 62  VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYV 121

Query: 121 KVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLL 180
           KVS+DGAPYLRK+DL +Y +Y+ LS+AL+K F +FTIG+ G Q  GMKDFMNESKLIDLL
Sbjct: 122 KVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQ--GMKDFMNESKLIDLL 181

Query: 181 NDSDYIPTYQDKDGDWMLVGDVPW 183
           N SDY+PTY+DKDGDWMLVGDVPW
Sbjct: 182 NGSDYVPTYEDKDGDWMLVGDVPW 203

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BLAST of CmaCh19G000560 vs. ExPASy Swiss-Prot
Match: Q38832 (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-44
Identity = 106/217 (48.85%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 1   MSFEETELRLGLPG------KNGSSEVTRKRGFHEESAAETIISSH-------NTNHKP- 60
           M+ +ETEL LGLPG          S V  KRGF E    +  + S+       NTN  P 
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 61  ----------PLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAAR 120
                     P  KA VVGWPP+R+YRKN +A +K    EE       + +  G  G   
Sbjct: 61  EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEE-------AMSSGG--GTVA 120

Query: 121 LVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLID 180
            VKVS+DGAPYLRKVDL MY SYK LS ALAK F +FT+G  G+Q  GM DFMNESK++D
Sbjct: 121 FVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQ--GMIDFMNESKVMD 180

Query: 181 LLNDSDYIPTYQDKDGDWMLVGDVPW--HTKGCREMQ 192
           LLN S+Y+P+Y+DKDGDWMLVGDVPW    + C+ ++
Sbjct: 181 LLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLR 206

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BLAST of CmaCh19G000560 vs. ExPASy Swiss-Prot
Match: Q38825 (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.9e-44
Identity = 107/222 (48.20%), Postives = 133/222 (59.91%), Query Frame = 0


Query: 1   MSFEETELRLGLPG------KNGSSEVTRKRGFHE--------ESAAETIISSHNTNHKP 60
           M+ + TEL LGLPG          S V  KRGF E        +S  E  +   N +  P
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVP 65

Query: 61  -----------PLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGNIG-- 120
                      P  KA VVGWPP+R+YRKN +  +K S+  E       S  K GN G  
Sbjct: 66  KEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEE-----ASSEKAGNFGGG 125

Query: 121 --AARLVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNE 180
              A LVKVS+DGAPYLRKVDL MY SY+ LS ALAK F +FT+G+ G+Q  GM DFMNE
Sbjct: 126 AAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQ--GMIDFMNE 185

Query: 181 SKLIDLLNDSDYIPTYQDKDGDWMLVGDVPWH--TKGCREMQ 192
           SKL++LLN S+Y+P+Y+DKDGDWMLVGDVPW    + C+ ++
Sbjct: 186 SKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLR 220

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BLAST of CmaCh19G000560 vs. ExPASy Swiss-Prot
Match: P0C132 (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.2e-41
Identity = 107/258 (41.47%), Postives = 137/258 (53.10%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEV--------TRKRGF----------------------HEE 60
           ++FE TELRLGLPG  G  +         + KRGF                       EE
Sbjct: 5   LAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPAAAAVDDDDDKEE 64

Query: 61  SAAE------TIISSHNTNHKPP----------------------------LPKALVVGW 120
           +AA+       I+ + N +  PP                             PKA VVGW
Sbjct: 65  AAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGW 124

Query: 121 PPIRSYRKNSLALRKGSNEEENEEVVLISRNKNG-NIGAARLVKVSLDGAPYLRKVDLTM 180
           PP+RSYRKN LA++    ++  +       +K+G    AA  VKVS+DGAPYLRKVDL M
Sbjct: 125 PPVRSYRKNILAVQADKGKDAADG----GGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKM 184

Query: 181 YNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWM 192
           Y SY +LS AL K F +FTIG+CGS  V   + MNESK+ DLLN S+Y+PTY+DKDGDWM
Sbjct: 185 YKSYLELSKALEKMFSSFTIGNCGSHGV---NGMNESKIADLLNGSEYVPTYEDKDGDWM 244

[Close]

BLAST of CmaCh19G000560 vs. ExPASy TrEMBL
Match: A0A6J1HXB0 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111467083 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.3e-100
Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60
           MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR
Sbjct: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60

Query: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120
           SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK
Sbjct: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120

Query: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180
           QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV
Sbjct: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180

Query: 181 PWH--TKGCREMQ 192
           PW    + C+ ++
Sbjct: 181 PWQMFVESCKRLR 193

[Close]

BLAST of CmaCh19G000560 vs. ExPASy TrEMBL
Match: A0A6J1HFG3 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463819 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.9e-99
Identity = 185/210 (88.10%), Postives = 187/210 (89.05%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60
           MSFEETELRLGLPG N  SEV RKRGFHEE           TNHKPPLPKA VVGWPPIR
Sbjct: 1   MSFEETELRLGLPGNNVRSEVRRKRGFHEEP---------GTNHKPPLPKAQVVGWPPIR 60

Query: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120
           SYRKNSLALRKGS    NEEVVLISRNKNGNIGAAR VKVSLDGAPYLRKVDLTMYNSYK
Sbjct: 61  SYRKNSLALRKGS----NEEVVLISRNKNGNIGAARFVKVSLDGAPYLRKVDLTMYNSYK 120

Query: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180
           QLSHALAKFFGAFTIGH GSQAVGMKDFMNESKLIDLLN SDY+PTYQDKDGDWMLVGDV
Sbjct: 121 QLSHALAKFFGAFTIGHYGSQAVGMKDFMNESKLIDLLNGSDYVPTYQDKDGDWMLVGDV 180

Query: 181 PWHTKGCREMQELQELTSPLIWARHANWLV 211
           PWHT+GCREMQELQELTSPLIWARHANWLV
Sbjct: 181 PWHTEGCREMQELQELTSPLIWARHANWLV 197

[Close]

BLAST of CmaCh19G000560 vs. ExPASy TrEMBL
Match: A0A6J1HI00 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463819 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.2e-81
Identity = 159/193 (82.38%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60
           MSFEETELRLGLPG N  SEV RKRGFHEE           TNHKPPLPKA VVGWPPIR
Sbjct: 1   MSFEETELRLGLPGNNVRSEVRRKRGFHEEP---------GTNHKPPLPKAQVVGWPPIR 60

Query: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120
           SYRKNSLALRKGS    NEEVVLISRNKNGNIGAAR VKVSLDGAPYLRKVDLTMYNSYK
Sbjct: 61  SYRKNSLALRKGS----NEEVVLISRNKNGNIGAARFVKVSLDGAPYLRKVDLTMYNSYK 120

Query: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180
           QLSHALAKFFGAFTIGH GSQAVGMKDFMNESKLIDLLN SDY+PTYQDKDGDWMLVGDV
Sbjct: 121 QLSHALAKFFGAFTIGHYGSQAVGMKDFMNESKLIDLLNGSDYVPTYQDKDGDWMLVGDV 180

Query: 181 PWH--TKGCREMQ 192
           PW    + C+ ++
Sbjct: 181 PWQMFVESCKRLR 180

[Close]

BLAST of CmaCh19G000560 vs. ExPASy TrEMBL
Match: A0A6J1HGA8 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463819 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.2e-81
Identity = 159/193 (82.38%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60
           MSFEETELRLGLPG N  SEV RKRGFHEE           TNHKPPLPKA VVGWPPIR
Sbjct: 1   MSFEETELRLGLPGNNVRSEVRRKRGFHEEP---------GTNHKPPLPKAQVVGWPPIR 60

Query: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120
           SYRKNSLALRKGS    NEEVVLISRNKNGNIGAAR VKVSLDGAPYLRKVDLTMYNSYK
Sbjct: 61  SYRKNSLALRKGS----NEEVVLISRNKNGNIGAARFVKVSLDGAPYLRKVDLTMYNSYK 120

Query: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180
           QLSHALAKFFGAFTIGH GSQAVGMKDFMNESKLIDLLN SDY+PTYQDKDGDWMLVGDV
Sbjct: 121 QLSHALAKFFGAFTIGHYGSQAVGMKDFMNESKLIDLLNGSDYVPTYQDKDGDWMLVGDV 180

Query: 181 PWH--TKGCREMQ 192
           PW    + C+ ++
Sbjct: 181 PWQMFVESCKRLR 180

[Close]

BLAST of CmaCh19G000560 vs. ExPASy TrEMBL
Match: A0A6J1ETJ1 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437421 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.7e-61
Identity = 132/193 (68.39%), Postives = 149/193 (77.20%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIIS----------SHNTNHKPPLPK 60
           MSFEETELRLGLPG NG  E+ RKRGFH E+AAET+I+            + N KPP PK
Sbjct: 32  MSFEETELRLGLPG-NG-REMARKRGFH-ETAAETMITMAELKLEASYGLDPNPKPPPPK 91

Query: 61  ALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAA-RLVKVSLDGAPYLR 120
             VVGWPPIRSYRKN L+L+KG+  E  +E++   +   GN  AA R VKVSLDGAPYLR
Sbjct: 92  GQVVGWPPIRSYRKNRLSLQKGTTSE--DEIISDEQKNIGNAAAAVRFVKVSLDGAPYLR 151

Query: 121 KVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQD 180
           KVD + Y+SYKQLS ALAK FG FTIG+CGSQA GMKDFMNESKLIDLLN SDY+PTYQD
Sbjct: 152 KVDFSRYSSYKQLSDALAKLFGPFTIGNCGSQAAGMKDFMNESKLIDLLNGSDYVPTYQD 211

Query: 181 KDGDWMLVGDVPW 183
           +DGDWMLVGDVPW
Sbjct: 212 RDGDWMLVGDVPW 219

[Close]

BLAST of CmaCh19G000560 vs. NCBI nr
Match: XP_022967639.1 (auxin-induced protein AUX28-like [Cucurbita maxima])

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-99
Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60
           MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR
Sbjct: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60

Query: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120
           SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK
Sbjct: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120

Query: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180
           QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV
Sbjct: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180

Query: 181 PWH--TKGCREMQ 192
           PW    + C+ ++
Sbjct: 181 PWQMFVESCKRLR 193

[Close]

BLAST of CmaCh19G000560 vs. NCBI nr
Match: XP_022963512.1 (auxin-induced protein AUX28-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98
Identity = 185/210 (88.10%), Postives = 187/210 (89.05%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60
           MSFEETELRLGLPG N  SEV RKRGFHEE           TNHKPPLPKA VVGWPPIR
Sbjct: 1   MSFEETELRLGLPGNNVRSEVRRKRGFHEEP---------GTNHKPPLPKAQVVGWPPIR 60

Query: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120
           SYRKNSLALRKGS    NEEVVLISRNKNGNIGAAR VKVSLDGAPYLRKVDLTMYNSYK
Sbjct: 61  SYRKNSLALRKGS----NEEVVLISRNKNGNIGAARFVKVSLDGAPYLRKVDLTMYNSYK 120

Query: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180
           QLSHALAKFFGAFTIGH GSQAVGMKDFMNESKLIDLLN SDY+PTYQDKDGDWMLVGDV
Sbjct: 121 QLSHALAKFFGAFTIGHYGSQAVGMKDFMNESKLIDLLNGSDYVPTYQDKDGDWMLVGDV 180

Query: 181 PWHTKGCREMQELQELTSPLIWARHANWLV 211
           PWHT+GCREMQELQELTSPLIWARHANWLV
Sbjct: 181 PWHTEGCREMQELQELTSPLIWARHANWLV 197

[Close]

BLAST of CmaCh19G000560 vs. NCBI nr
Match: XP_023554755.1 (auxin-induced protein AUX28-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 165/193 (85.49%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60
           MSFEETELRLGLPG NGSSEVTRKR FHEESA         TNHKPPLPKA VVGWPPIR
Sbjct: 61  MSFEETELRLGLPGNNGSSEVTRKRVFHEESA---------TNHKPPLPKAQVVGWPPIR 120

Query: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120
           SYR+NSLALRKGSNEEEN+EVVLISRNKNGNIGAAR VKVSLDGAPYLRKVDLTMYNSYK
Sbjct: 121 SYRRNSLALRKGSNEEENDEVVLISRNKNGNIGAARFVKVSLDGAPYLRKVDLTMYNSYK 180

Query: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180
           QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLN SDY+PTYQDKDGDWMLVG+V
Sbjct: 181 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNGSDYVPTYQDKDGDWMLVGEV 240

Query: 181 PWH--TKGCREMQ 192
           PW    + C+ ++
Sbjct: 241 PWQMFVESCKRLR 244

[Close]

BLAST of CmaCh19G000560 vs. NCBI nr
Match: XP_023554756.1 (auxin-induced protein AUX28-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 165/193 (85.49%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60
           MSFEETELRLGLPG NGSSEVTRKR FHEESA         TNHKPPLPKA VVGWPPIR
Sbjct: 61  MSFEETELRLGLPGNNGSSEVTRKRVFHEESA---------TNHKPPLPKAQVVGWPPIR 120

Query: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120
           SYR+NSLALRKGSNEEEN+EVVLISRNKNGNIGAAR VKVSLDGAPYLRKVDLTMYNSYK
Sbjct: 121 SYRRNSLALRKGSNEEENDEVVLISRNKNGNIGAARFVKVSLDGAPYLRKVDLTMYNSYK 180

Query: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180
           QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLN SDY+PTYQDKDGDWMLVG+V
Sbjct: 181 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNGSDYVPTYQDKDGDWMLVGEV 240

Query: 181 PWH--TKGCREMQ 192
           PW    + C+ ++
Sbjct: 241 PWQMFVESCKRLR 244

[Close]

BLAST of CmaCh19G000560 vs. NCBI nr
Match: KAG6571483.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.5 bits (807), Expect = 3.5e-82
Identity = 160/193 (82.90%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVTRKRGFHEESAAETIISSHNTNHKPPLPKALVVGWPPIR 60
           MSFEETELRLGLPG N  SEV RKRGFHEE           TNHKPPLPKA VVGWPPIR
Sbjct: 1   MSFEETELRLGLPGNNVRSEVRRKRGFHEEP---------GTNHKPPLPKAQVVGWPPIR 60

Query: 61  SYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAARLVKVSLDGAPYLRKVDLTMYNSYK 120
           SYRKNSLALRKGS    NEEVVLISRNKNGNIGAAR VKVSLDGAPYLRKVDLTMYNSYK
Sbjct: 61  SYRKNSLALRKGS----NEEVVLISRNKNGNIGAARFVKVSLDGAPYLRKVDLTMYNSYK 120

Query: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNDSDYIPTYQDKDGDWMLVGDV 180
           QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLN SDY+PTYQDKDGDWMLVGDV
Sbjct: 121 QLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLLNGSDYVPTYQDKDGDWMLVGDV 180

Query: 181 PWH--TKGCREMQ 192
           PW    + C+ ++
Sbjct: 181 PWQMFVESCKRLR 180

[Close]

BLAST of CmaCh19G000560 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 181.4 bits (459), Expect = 7.4e-46
Identity = 101/204 (49.51%), Postives = 129/204 (63.24%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEV----TRKRGFHE-------------ESAAETIISSHNTN 60
           ++FE TELRLGLPG N   E+      KRGF E             +S ++  + +    
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61

Query: 61  HKPPLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAA-----RLV 120
              P  KA VVGWPP+RS+RKN ++ +K +  +  E     S +      A+       V
Sbjct: 62  VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYV 121

Query: 121 KVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLIDLL 180
           KVS+DGAPYLRK+DL +Y +Y+ LS+AL+K F +FTIG+ G Q  GMKDFMNESKLIDLL
Sbjct: 122 KVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQ--GMKDFMNESKLIDLL 181

Query: 181 NDSDYIPTYQDKDGDWMLVGDVPW 183
           N SDY+PTY+DKDGDWMLVGDVPW
Sbjct: 182 NGSDYVPTYEDKDGDWMLVGDVPW 203

[Close]

BLAST of CmaCh19G000560 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 )

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-45
Identity = 106/217 (48.85%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 1   MSFEETELRLGLPG------KNGSSEVTRKRGFHEESAAETIISSH-------NTNHKP- 60
           M+ +ETEL LGLPG          S V  KRGF E    +  + S+       NTN  P 
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 61  ----------PLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGNIGAAR 120
                     P  KA VVGWPP+R+YRKN +A +K    EE       + +  G  G   
Sbjct: 61  EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEE-------AMSSGG--GTVA 120

Query: 121 LVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNESKLID 180
            VKVS+DGAPYLRKVDL MY SYK LS ALAK F +FT+G  G+Q  GM DFMNESK++D
Sbjct: 121 FVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQ--GMIDFMNESKVMD 180

Query: 181 LLNDSDYIPTYQDKDGDWMLVGDVPW--HTKGCREMQ 192
           LLN S+Y+P+Y+DKDGDWMLVGDVPW    + C+ ++
Sbjct: 181 LLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLR 206

[Close]

BLAST of CmaCh19G000560 vs. TAIR 10
Match: AT3G23050.1 (indole-3-acetic acid 7 )

HSP 1 Score: 178.3 bits (451), Expect = 6.3e-45
Identity = 107/222 (48.20%), Postives = 133/222 (59.91%), Query Frame = 0


Query: 1   MSFEETELRLGLPG------KNGSSEVTRKRGFHE--------ESAAETIISSHNTNHKP 60
           M+ + TEL LGLPG          S V  KRGF E        +S  E  +   N +  P
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVP 65

Query: 61  -----------PLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGNIG-- 120
                      P  KA VVGWPP+R+YRKN +  +K S+  E       S  K GN G  
Sbjct: 66  KEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEE-----ASSEKAGNFGGG 125

Query: 121 --AARLVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNE 180
              A LVKVS+DGAPYLRKVDL MY SY+ LS ALAK F +FT+G+ G+Q  GM DFMNE
Sbjct: 126 AAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQ--GMIDFMNE 185

Query: 181 SKLIDLLNDSDYIPTYQDKDGDWMLVGDVPWH--TKGCREMQ 192
           SKL++LLN S+Y+P+Y+DKDGDWMLVGDVPW    + C+ ++
Sbjct: 186 SKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLR 220

[Close]

BLAST of CmaCh19G000560 vs. TAIR 10
Match: AT3G23050.2 (indole-3-acetic acid 7 )

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-44
Identity = 106/211 (50.24%), Postives = 128/211 (60.66%), Query Frame = 0


Query: 1   MSFEETELRLGLPG------KNGSSEVTRKRGFHE--------ESAAETIISSHNTNHKP 60
           M+ + TEL LGLPG          S V  KRGF E        +S  E  +   N +  P
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVP 65

Query: 61  -----------PLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGNIG-- 120
                      P  KA VVGWPP+R+YRKN +  +K S+  E       S  K GN G  
Sbjct: 66  KEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEE-----ASSEKAGNFGGG 125

Query: 121 --AARLVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNE 180
              A LVKVS+DGAPYLRKVDL MY SY+ LS ALAK F +FT+G+ G+Q  GM DFMNE
Sbjct: 126 AAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQ--GMIDFMNE 185

Query: 181 SKLIDLLNDSDYIPTYQDKDGDWMLVGDVPW 183
           SKL++LLN S+Y+P+Y+DKDGDWMLVGDVPW
Sbjct: 186 SKLMNLLNSSEYVPSYEDKDGDWMLVGDVPW 209

[Close]

BLAST of CmaCh19G000560 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 164.5 bits (415), Expect = 9.4e-41
Identity = 96/211 (45.50%), Postives = 122/211 (57.82%), Query Frame = 0


Query: 1   MSFEETELRLGLPGKNGSSEVT-RKRGFHEESAAETIISSHNTNHKP------------- 60
           ++  ETEL LGLPG +  + VT  KRGF     +ET+    N N++P             
Sbjct: 7   LNLRETELCLGLPGGDTVAPVTGNKRGF-----SETVDLKLNLNNEPANKEGSTTHDVVT 66

Query: 61  ---------------PLPKALVVGWPPIRSYRKNSLALRKGSNEEENEEVVLISRNKNGN 120
                          P  KA VVGWPP+RSYRKN               V++  +  +G 
Sbjct: 67  FDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKN---------------VMVSCQKSSGG 126

Query: 121 IGAARLVKVSLDGAPYLRKVDLTMYNSYKQLSHALAKFFGAFTIGHCGSQAVGMKDFMNE 180
             AA  VKVS+DGAPYLRK+DL MY SY +LS+AL+  F +FT+G  G +  GM DFMNE
Sbjct: 127 PEAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEE-GMIDFMNE 186

Query: 181 SKLIDLLNDSDYIPTYQDKDGDWMLVGDVPW 183
            KL+DL+N  DY+P+Y+DKDGDWMLVGDVPW
Sbjct: 187 RKLMDLVNSWDYVPSYEDKDGDWMLVGDVPW 196

The following BLAST results are available for this feature:

BLAST of CmaCh19G000560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13089	2.4e-49	49.78	Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1	[more]
O24407	1.0e-44	49.51	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]
Q38832	3.0e-44	48.85	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=...	[more]
Q38825	8.9e-44	48.20	Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1	[more]
P0C132	3.2e-41	41.47	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30...	[more]

BLAST of CmaCh19G000560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HXB0	5.3e-100	94.82	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111467083 PE=3 SV=1	[more]
A0A6J1HFG3	5.9e-99	88.10	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463819 PE=3 SV=1	[more]
A0A6J1HI00	3.2e-81	82.38	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463819 PE=3 SV=1	[more]
A0A6J1HGA8	3.2e-81	82.38	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111463819 PE=3 SV=1	[more]
A0A6J1ETJ1	1.7e-61	68.39	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111437421 PE=3 SV=1	[more]

BLAST of CmaCh19G000560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967639.1	1.1e-99	94.82	auxin-induced protein AUX28-like [Cucurbita maxima]	[more]
XP_022963512.1	1.2e-98	88.10	auxin-induced protein AUX28-like isoform X2 [Cucurbita moschata]	[more]
XP_023554755.1	2.1e-87	85.49	auxin-induced protein AUX28-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023554756.1	2.1e-87	85.49	auxin-induced protein AUX28-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6571483.1	3.5e-82	82.90	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]

BLAST of CmaCh19G000560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04730.1	7.4e-46	49.51	indoleacetic acid-induced protein 16	[more]
AT4G14550.1	2.2e-45	48.85	indole-3-acetic acid inducible 14	[more]
AT3G23050.1	6.3e-45	48.20	indole-3-acetic acid 7	[more]
AT3G23050.2	1.8e-44	50.24	indole-3-acetic acid 7	[more]
AT1G04250.1	9.4e-41	45.50	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 26..183 e-value: 1.3E-58 score: 198.7
None	No IPR available	GENE3D	3.10.20.90		coord: 68..200 e-value: 8.4E-30 score: 104.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31734:SF113	AUXIN-INDUCED PROTEIN AUX28	coord: 1..31 coord: 40..183
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 87..183
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 1..31
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 40..183
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 95..198 score: 14.095577

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000560.1	CmaCh19G000560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding