CmaCh19G000470 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G000470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	preprotein translocase subunit SCY2, chloroplastic
Location	Cma_Chr19: 251650 .. 259779 (+)
RNA-Seq Expression	CmaCh19G000470
Synteny	CmaCh19G000470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAGCGCCTATCTGCACTCGTCTTTTCCCTACTAAACCTTCAAAGTTTCGAGGTTAGCTTCCTGAATTCGGTCGTGGGAAAGTATTATTACGTAATGAAAATGACAAATAGTTAAATTATAACGTTATCCTCTGCGTATTTCATTTGATAGTGTTTGTTCTTGTGAAAGTAGAGTGGTTGAATCTTATATTCATGAATTGTTTTAATCGAGTTTGTTTCGCTGTTGAATTAGCTTGTAGGTGAAATTACTTCACTTTCATAAAGATTCCAATTGTTTGTTAAGTTCAACTCCATTGCATATCTATTGTTTATACCTCACAAACATGTAGCATTTTATGGTTAAACTTAGTACCATATTTTAACTCCATCCTTTATGGACGACTTGTTTATCCATGATTTCAAGACCTAATATTTTTATTTGGCTAATCTTATGGTTTTAAAATGTCGCAAATTGTAACAACCTAATGTGCACGTATTTCACAATATAATATTCACTAAGCAATGAGAGAAGAAGATGAGAAATGATGAGGGTGTTTGCCTTTGATGCTATGATCATCCGTCTCTTTTCATAATGTTCAGATATCTTAGGTTCGAACTGGAAAATCTATTTTGTATTTTCCTTTTATATCAGAAATGCTTCCAGATGCTATGAGTATACTTTGATGAGGTGACCAACAATCAATTTACTATTTGGTTGTCAGCTTAGGATAGTGGTTTAATTCTCACATCACCACCATGTATTTATTCGATATACTGCAAACACTCATTTTCCTCCCAGGATTAAAATCTCTATACTATGATATGATTCATGTCTAATCGATTCTGCTGTTGACCATGGGAGTTCGCTTTGCTACAAAATAATGTTTTGCATTAAACACGTGTTATATGGCCTCACTTGGCTGCTTTCGTTCTTACAGTTGCTGCAGCTTATGATGTCCAATTCTGTCCTTTGAAGTTTGGTAGATCTGCCGCTGTTATTAATTTCAACTCTCTGAAATGCAAGGGAAGAAATAATGTGTTATTGAGTAGACCTTTTGTCTCTAAAGTGAACGAAAAGTCGTTTGATTGTTTGTCAAATCAGTGCCGAAGCAGCCGTATGAATGTCAAGGCAACATCTGAGCAGTGTCTAGACCTTGAAACTTTTTCGCAGGAATTGAATGATGGGGATGTTTTTTTCACTTCTCCGAACGGCACTAACTCCGAAACCTGGAAACCCAGATCTAAAATGTTTAGAAATAGATTCTTGAATCTTGTACGTCTTCGTTCTTTTCTCAACAATGCTGCTGAATCATTTTTTAAAAGTGAAATACGGCGAAGGTTGTTTGTAACAGCAGTGCTAATTGTAATAAGTCGTATTGGATACTTCATTCCTCTTCCTGGGTATGATCGGAGGTTGATACCACAAGATTACCTTAGCTTTGTTTCTGGATCTGTTGGTGAGTTCATGAAATTACTGTATGTGCATGAGTTATCTACGTTGTGTATTCATATGTTGCAGAATTCAATTTCATTTTGGGCAAATTACTTGGGTGATGTTGACTCTTTTACTTATATTCATGTTTGTGGCAGATGAACTTGGTGATTTTACTACGGAGATGAAAATGTCTTTTTTCCAGCTAGGTATCAGTCCTCAGATTATTGCATCAATCATCATGCAGGTTTAACATTTTCTTCATATCTATCTTCAATGCTTGGTATTGACGTAGAAAGTGAAATACACAATAAAGGCATTTAAGAATATTGAAGGGCTTGTTCCCTTTAGAGAAACTTGGCTGTGAAATATTCCGAAACTTGCAGTATTGGGAAAGTTCTAATCCAAGTCTACTCAATGAATACAATATAGGTAAAACTTTTAAAAAGTAAATAACCTTAGTAGCCACTATTCTTAGTAACAATTCAGTTAAATTAAAAATTTAGTTCATGAACTTTGAGGATTGTGTCTATTATATCCTTTGAAACTTTCAAAATTACAAATTTATTCCTTGGAACTTTTGAATTGTTTAAAAATTTCAGATTTACTGAACGTAAAATTCCTTCCAAAGAGCCCAATGGAGAGCTTTACATGCATTACTCCACAAGACTCTTGCCTTCTCTTTGAACCACAAACTGGACAGCCACTCAAGAAGTCCATCTTCTATTTCCTTTTGAGGGCACCAACCAAATTAAAATAATTGATTAGGTACATCCAGCCTTTATAAGAAAACTCACAGTGAAGAAAATGGTGATTGCTAGATTCTTCATTCTTGTTGGAGATGACCATTTGGAGAGATAGCCATACTTGGATTTCTTCTTTGAATTCTATTCAGTATTTGGTCTTCCATGAGTTAAAGACCAGAGAAAAAAAGTTCAGTCTTGGGACTTTTCCATCCCAAATCCCTTCGGCTAGATATTGATTTAAACAGGCATAATCCCCTCAGGAATCCAAAAATCTGTTCTTCCTCTGAATTCAGCTTCGTAAGCCCATAATGTTCACCAACAGGATTTTGTTCATAAATACTGTTGGTGAACATTATGACTTTAAGAGTATGAGCTCAAACCACTATCTACCACTTTAATTGTATGACTATGGTTAAGGAAGAAGAATACTTTTGCAATTACCTTAATGATTTAATTTATTACCCAAGCAAATTTGAATGCATTAGGAATTTAAAATGCATCTAATGTTTCTTTGTTCACCATTAGTAATTCACTCACGATAGAATCAAAGTAAGTTCTAACATATCATTGCATTGAGGCAAACTACTATGCTTAAGTCTTTTCCATGCTCAAGCTGTTTTTCATGGGTGGTCCTAATAGTTGACTCCATGATGAGTTTCCAGGGGCAATACCTCTTGTTGATGAACGTATTTATGAAAGTTATTTTGTATCTTTTGTTTTATTTATTTATTTATAGTAATAGTTTTTATTATTGTATTGCATCCATGTTGGACTGAATGTCGATGCTTAACTTCTCAAAATTGATGCATAGGTACTCTGTCACATTTTACCCTCCTTAGTAAAGCTGAGAAAAGAAGGCTTGGATGGTCAAGAGAAGATCAAGAGTTATATGTATGTCTGATACTTCATTCCAACCATTGATCTACATCTTTCTATTAATTTCGCAAGCTTATACTCATTTTCTTCCTTTTTTGATGGAATTCCTACGAACATCACCATGTAACATCAGATGGTGGATGTCACTTGGCTTTGCAATAGTGGAGGCTTTAGTTCTATCTTGTTACTCACTCCCATACTCAATCTATGCAGCAAATCACAGGTAAATTTTAGCTATAAGAGCATCAGTTTGAATAGTATTTTGGGCTTTTGAGCAGTTGTATAGGATTATAGTCTCAGTTTAGACAGTGAAGTAAAATATCCTTTTCTATAGTAATATCTTTTCATTATCTTTTCATTGGTGCATGTTGTATGTTCATTTCTCTTCCAGCGTCAATATTGGTTTTTGCTTTCATTTAACTCGATTCTCATGCTTATTTTTATCGTAATTGTTGGTTCAAGTACTTTTATTCCGAGAATTGGGGGTGCATCTTAAAAAGAGAGATGTTAAATCTTTAAAAGAGAGATAGAGAGTGAAGGTTGCATAGTGTTCATAAAGGGGGTTATTCTTAATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGAGTTAAGCATGTGATGGTGACTACTTTCTTATTGGTTTGTGGTGCTATGACAATGACATGGATTTGTGACACCATCTCAGAGTCTGGATTTGGTAGGTCACTTCTTTCTCTCATTTAATTTTGATCACTTGATCCATTGTTTTATGCTCTTCTTCATTATTTATGGTTCAAGACACTTGAGAGATTCGTTGTTAATAATGTTCATCCATTAACTGAAGAATATATAGTCGGTATATTATTGTGTGCCTGCCTGTGTACGTATGTATGAGTGTGTGATTGCACACACGTATAAATGTGGGGATGGGGTGTTGTATCCTTGGCGCTTCAGTCTCCCATCTATCCTCTCTATGATTCAACTCTTGGCTTTACTATTCTATCCTTTTCCAATTTACGTTTTCTCTATCTAGATGATGTGTTTTAAACCACCTCACGAAGAATCTTGTACCATATTCATAAACTTTGTAATGGATGCTTCTTCTCTGTTTAACAAGTAACGCTTGTTGCAGGGCAAGGTTCTTCTCTAATTATATGCGTTGGAATACTGTCGGGCTATACAGAGACATTGTACAAAATGTTGTCTCAGCTATCAGGTATGCAATTAAACTTGATGGTTTAAAAGTTACATACCCTTTGGAGTTGCTTTCATCTGAGTCCCAATCCACTTCATCAGATGTGCTATCCAGATCTTGCTAGAAGACTAAGACCTATTTCTTTTTACTCCTCCAATCATCCATTACTTCAATGGCTATAAGAATAGAGTCAATAATTTGCCTTTCTTTGATAAATGCCGCCTGATAATGTGATATAGTGGAGATGAAAGCTTCCTTTAGGCAGCCAAGTATTTCGACTAAGAATTTTAGAAGCAAGTTAAATTGTATTAGTAATGTGATGTCTAACTGACCAAGGTGACCCAGAACTTCCCCATTCAGAACATAAGCTTTGCTTTACCCAATTCAATTTCTTGGGAAAGGAATCTAGGTTTTACATTTTTTTTTTCTTTCCATTATAAGACCGTCTTTGTAGTTAAGTAATGATCTATCTTTTGGAGTCTAATACAAGAACATAACATCTTCATTACAAATATTGATTATTATTTTATTTGTTGTTATTTTTAATCCTATGTACTACCATTACTTGTTACTAGATCTGGCCGACCCCTATCTGTAAGAAACGTTCACCAAATTTCAAGATGAGAAAGGAAGCCTGGATGAGAGAGGCACAAGTGTCCAAAGCTAAAGATATTAGGATCCTGCTTAAAATTTTCAGCTTTAGAATAAAAAAAGGGAATGGTCCAATATCTCTACTAAAGCTTACAGTTCCATTAAGTAATTTTTCAAAAAAAAAAAAAAAAAAAGTTAAAAAAGGGTTNTTTTAAAAAAAAAAAAAAAAAAAAGTTAAAAAAGGGTTATATAACCTTATTTGGAAAAACCAGGTCAAATATCATCTTGGCCCAATGTTTTAGCCTTTAAGTCAATCTATCCAATTATTCTAAGTCAGATCCTTGTAAAAGATTATTTTTAAATTTAACCAATAATCCCATGCTAGTCAATATTTATCGTAAGGAAAAATCAAGAGAAGAGAAAACTGTAAGATGAAATAAAACAATGCTGATAATTGTTAGGGATGCCAGCAGTATCGTGTTCTATGAACTTAGTTCTCAACTGAATTCCTATATTCCATCTGGGTGCTGTTAGTTGAGGATTTATGACGGAATTTTTTAGTCTGGTAATAAATTTATTCAGTAAGGAAGGTTTACAATCGAGGATAATGCTTGATGTACATTGTTTGTGAATTTACTAAGGTACAATTGTTTTGAATAGAGTAAATAAATATTATGTGTACTCTTTTCCCCCCTTAAATTTCCATCAGCTACTTGTGAAATCTTTCAGTTTTTTGACTACTTAAAAATGTAACATATCACAGGACGTACTGTGATTTGGTGGCCGTATGTACTTGCCTTATTGGCCATTTTTACCGTAGTTACGATGTGGGCAGTTGTTGTAACCGAAGGTTGCAGGAAAATTAAGCTTCAGTATTATGGTTTTAAACTTGCTTCAGCTGCGAGGTATTCTGATTTTTTTTTTCGTGGAAAATATATATCATATATTTCTATTATCTCATGCTTCCATGCATTTGGTTTCTTGTCACAGTAAGCAGTTTCATAATGTTGAATGATGTTGATTCCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCCAATGTTAGGGTAAAATAAAGTAACATCATGTGGTTCGTTTAATTTCATTCCTTCGGCATACATGCTGTTATCACTTGCCTCTCCTATGCTTGCATTGGCTATGTTTTAAACAGTTGTCTGGATTTTGTACTATGCTTGAGCCCATATCCGATTTTCCGATCTTGTCATTTTTGGTTGATTATCTATTTTACGATCCCCTTTTCCTTTTGGTTTCTTTCCAGAGAAGACTCACCAATCACTGAAGTAGAGCCTTATATACCTTTTAATATCAATCCTGCTGGGATGCAACCAATTCTCACGACCACTTATCTCTTGGCGTTTCCCAGTATACTTGCCAGGTTGTTATATAACATATATCCTTCGTTGCATTACAATGGCTAAAGTTATATACTTTATGTGATTGATATCAACTTTTCTTGTGGAGATTATGATGCAATTTCTAACATCAGGTTTTGTACACAGCGTCCTAAATTCAACATTCTGGGTGCATGTAAAGGAGATACTGAACCCTGAAAGTTCTATTGGTGCAGAGCCTTGGGTTTATTACTTAATATATGCGGTTTTTGTATTCTTGTTCAATATATTTGACATTGTAAGTTTCTTTACCTCATGTCTTTGGTTTTTAAATGATTATTGCATTCGCAAGCTGCCAACATCTCTAGAATTTTATATTTTCTTTTGGCTAAATACATGACTTAGGCTTAATGTTTTGATGTTTTTCTGATTTAGTGTGATCCAGACAAACTTTACCATTTGGTACATATAACATCCACCACCCCTGGAAAAGTTGTTAATATGCAAAAATTGAAACTTTTTAAACAAAGGGATTAAATTGCTGGCCATAGTGGGGCCACCTATCTAGTGTTTAATATTCTACCAGCCTTCTTGAAAATTGTAATAGGAAAACTGTTATCCCATTAGAATAGTTGAGATGATATTCATTTACCTGTCTAGGCCAACTTGCCAAAAGAGATTTCAGACTATTTAAATAAGATGGGAGCAAGGATTCCAAACATTAAACCCGGGAAAGCTACTATAGAGTACCTCACGAAAATTCAAGCATCAACACGCTTTTGGGGTATGTTTAATCATTCAATTTGTGTTTATAATGACATTGTCTTTCCCAGCTTACTAATATTTCATATTTTGGTTGATTGATCTCTTAATTTGATTTTGCATGGTGGCAAATTTCAGGCGGGCTATTGTTGAGTTTCTTGGCGACAACGTCATCTCTTCTCGACCATTACTTACGCAGTATTAATGCCGGCTTTGCTATTGGTTTTACATCAGTTCTGATCATTGTAAGTACAAAAATGTTTGTCATTGTCTTATCATATGCTTCAGTCATTGGAAAATGCTATGACAATGGTTCTCACCACACACACTTCTAATAGGTTTAACTAAGGCAATGCAACTAATCTGGTCATTGGGATTTTGATAGAAGTACCAATAATATACCCCATTAGAGGAAAATGTGGTAGATTTGTTATATTAATAAACTGTTCAAGCTTTCCAATGTTATCGATGAGCTCAAGTTGCTGCATGTTCATTGTTCAGGTGGGTTCTATTATTGAACTCAGAAGATCTTACCAAGCATATAACGTAATGCCAAGTTTAAGCAATGCTTTGAGGCGTTATGGTGCATGACACAACTAGTTCAAATGATGCTCCAAGCGGCTCTGTATTCGAGCTTCTAAAGGATCCAACAATCTTCAAAAGTGTTTCAAAATCATGTGCATCCGTTACACCGTAAACTAATGCAAATATCAGGAAAATTTTGATTCTCTGGACTTGGAAACACGGTAGGTTTTACTTCTTGTAAAGGATATTATATGATAGCCTAGAATCTGTGAAATTATGACACTGAAATTGTATGGGCTTAGGGTTTAGGGTTTATGTAAATTGAGGAAAAGCAAGTGTTGATAAGTTACAGCTTAGCAAGAATACCTCTGGAGAAAATTTCACTGGCAATCTCCTTTGCACCTGTTGGTGTTGGACGGCGGCGGCCGAGTGTTGGGTCTTTGTGGTCTTGATGGGCCCATTGTTGAATCCACCCTCCCAAACCGACATCCCGATTTTGATGAGATGCTTCTAAGAGATTATGTCTATCAGTGGAAGTCTATGTACTTTGGCACTTTTATTTTTATGCAGATATAATGTGACAGTCTCATTAATGAAATTTTTATCGGATAGTCTGGGGGCATTACATTAATAAAATGCTTTAAAACGGGTCGTATTTGATTAA

mRNA sequence

ATGGAAGCAGCGCCTATCTGCACTCGTCTTTTCCCTACTAAACCTTCAAAGTTTCGAGTTGCTGCAGCTTATGATGTCCAATTCTGTCCTTTGAAGTTTGGTAGATCTGCCGCTGTTATTAATTTCAACTCTCTGAAATGCAAGGGAAGAAATAATGTGTTATTGAGTAGACCTTTTGTCTCTAAAGTGAACGAAAAGTCGTTTGATTGTTTGTCAAATCAGTGCCGAAGCAGCCGTATGAATGTCAAGGCAACATCTGAGCAGTGTCTAGACCTTGAAACTTTTTCGCAGGAATTGAATGATGGGGATGTTTTTTTCACTTCTCCGAACGGCACTAACTCCGAAACCTGGAAACCCAGATCTAAAATGTTTAGAAATAGATTCTTGAATCTTGTACGTCTTCGTTCTTTTCTCAACAATGCTGCTGAATCATTTTTTAAAAGTGAAATACGGCGAAGGTTGTTTGTAACAGCAGTGCTAATTGTAATAAGTCGTATTGGATACTTCATTCCTCTTCCTGGGTATGATCGGAGGTTGATACCACAAGATTACCTTAGCTTTGTTTCTGGATCTGTTGATGAACTTGGTGATTTTACTACGGAGATGAAAATGTCTTTTTTCCAGCTAGGTATCAGTCCTCAGATTATTGCATCAATCATCATGCAGGTACTCTGTCACATTTTACCCTCCTTAGTAAAGCTGAGAAAAGAAGGCTTGGATGGTCAAGAGAAGATCAAGAGTTATATATGGTGGATGTCACTTGGCTTTGCAATAGTGGAGGCTTTAGTTCTATCTTGTTACTCACTCCCATACTCAATCTATGCAGCAAATCACAGAGTTAAGCATGTGATGGTGACTACTTTCTTATTGGTTTGTGGTGCTATGACAATGACATGGATTTGTGACACCATCTCAGAGTCTGGATTTGGGCAAGGTTCTTCTCTAATTATATGCGTTGGAATACTGTCGGGCTATACAGAGACATTGTACAAAATGTTGTCTCAGCTATCAGGACGTACTGTGATTTGGTGGCCGTATGTACTTGCCTTATTGGCCATTTTTACCGTAGTTACGATGTGGGCAGTTGTTGTAACCGAAGGTTGCAGGAAAATTAAGCTTCAGTATTATGGTTTTAAACTTGCTTCAGCTGCGAGAGAAGACTCACCAATCACTGAAGTAGAGCCTTATATACCTTTTAATATCAATCCTGCTGGGATGCAACCAATTCTCACGACCACTTATCTCTTGGCGTTTCCCAGTATACTTGCCAGCGTCCTAAATTCAACATTCTGGGTGCATGTAAAGGAGATACTGAACCCTGAAAGTTCTATTGGTGCAGAGCCTTGGGTTTATTACTTAATATATGCGGTTTTTGTATTCTTGTTCAATATATTTGACATTGCCAACTTGCCAAAAGAGATTTCAGACTATTTAAATAAGATGGGAGCAAGGATTCCAAACATTAAACCCGGGAAAGCTACTATAGAGTACCTCACGAAAATTCAAGCATCAACACGCTTTTGGGGCGGGCTATTGTTGAGTTTCTTGGCGACAACGTCATCTCTTCTCGACCATTACTTACGCAGTATTAATGCCGGCTTTGCTATTGGTTTTACATCAGTTCTGATCATTGTGGGTTCTATTATTGAACTCAGAAGATCTTACCAAGCATATAACGTAATGCCAAGTTTAAGCAATGCTTTGAGGCGTTATGGTGCATGACACAACTAGTTCAAATGATGCTCCAAGCGGCTCTGTATTCGAGCTTCTAAAGGATCCAACAATCTTCAAAAGTGTTTCAAAATCATGTGCATCCGTTACACCGTAAACTAATGCAAATATCAGGAAAATTTTGATTCTCTGGACTTGGAAACACGGTAGGTTTTACTTCTTGTAAAGGATATTATATGATAGCCTAGAATCTGTGAAATTATGACACTGAAATTGTATGGGCTTAGGGTTTAGGGTTTATGTAAATTGAGGAAAAGCAAGTGTTGATAAGTTACAGCTTAGCAAGAATACCTCTGGAGAAAATTTCACTGGCAATCTCCTTTGCACCTGTTGGTGTTGGACGGCGGCGGCCGAGTGTTGGGTCTTTGTGGTCTTGATGGGCCCATTGTTGAATCCACCCTCCCAAACCGACATCCCGATTTTGATGAGATGCTTCTAAGAGATTATGTCTATCAGTGGAAGTCTATGTACTTTGGCACTTTTATTTTTATGCAGATATAATGTGACAGTCTCATTAATGAAATTTTTATCGGATAGTCTGGGGGCATTACATTAATAAAATGCTTTAAAACGGGTCGTATTTGATTAA

Coding sequence (CDS)

ATGGAAGCAGCGCCTATCTGCACTCGTCTTTTCCCTACTAAACCTTCAAAGTTTCGAGTTGCTGCAGCTTATGATGTCCAATTCTGTCCTTTGAAGTTTGGTAGATCTGCCGCTGTTATTAATTTCAACTCTCTGAAATGCAAGGGAAGAAATAATGTGTTATTGAGTAGACCTTTTGTCTCTAAAGTGAACGAAAAGTCGTTTGATTGTTTGTCAAATCAGTGCCGAAGCAGCCGTATGAATGTCAAGGCAACATCTGAGCAGTGTCTAGACCTTGAAACTTTTTCGCAGGAATTGAATGATGGGGATGTTTTTTTCACTTCTCCGAACGGCACTAACTCCGAAACCTGGAAACCCAGATCTAAAATGTTTAGAAATAGATTCTTGAATCTTGTACGTCTTCGTTCTTTTCTCAACAATGCTGCTGAATCATTTTTTAAAAGTGAAATACGGCGAAGGTTGTTTGTAACAGCAGTGCTAATTGTAATAAGTCGTATTGGATACTTCATTCCTCTTCCTGGGTATGATCGGAGGTTGATACCACAAGATTACCTTAGCTTTGTTTCTGGATCTGTTGATGAACTTGGTGATTTTACTACGGAGATGAAAATGTCTTTTTTCCAGCTAGGTATCAGTCCTCAGATTATTGCATCAATCATCATGCAGGTACTCTGTCACATTTTACCCTCCTTAGTAAAGCTGAGAAAAGAAGGCTTGGATGGTCAAGAGAAGATCAAGAGTTATATATGGTGGATGTCACTTGGCTTTGCAATAGTGGAGGCTTTAGTTCTATCTTGTTACTCACTCCCATACTCAATCTATGCAGCAAATCACAGAGTTAAGCATGTGATGGTGACTACTTTCTTATTGGTTTGTGGTGCTATGACAATGACATGGATTTGTGACACCATCTCAGAGTCTGGATTTGGGCAAGGTTCTTCTCTAATTATATGCGTTGGAATACTGTCGGGCTATACAGAGACATTGTACAAAATGTTGTCTCAGCTATCAGGACGTACTGTGATTTGGTGGCCGTATGTACTTGCCTTATTGGCCATTTTTACCGTAGTTACGATGTGGGCAGTTGTTGTAACCGAAGGTTGCAGGAAAATTAAGCTTCAGTATTATGGTTTTAAACTTGCTTCAGCTGCGAGAGAAGACTCACCAATCACTGAAGTAGAGCCTTATATACCTTTTAATATCAATCCTGCTGGGATGCAACCAATTCTCACGACCACTTATCTCTTGGCGTTTCCCAGTATACTTGCCAGCGTCCTAAATTCAACATTCTGGGTGCATGTAAAGGAGATACTGAACCCTGAAAGTTCTATTGGTGCAGAGCCTTGGGTTTATTACTTAATATATGCGGTTTTTGTATTCTTGTTCAATATATTTGACATTGCCAACTTGCCAAAAGAGATTTCAGACTATTTAAATAAGATGGGAGCAAGGATTCCAAACATTAAACCCGGGAAAGCTACTATAGAGTACCTCACGAAAATTCAAGCATCAACACGCTTTTGGGGCGGGCTATTGTTGAGTTTCTTGGCGACAACGTCATCTCTTCTCGACCATTACTTACGCAGTATTAATGCCGGCTTTGCTATTGGTTTTACATCAGTTCTGATCATTGTGGGTTCTATTATTGAACTCAGAAGATCTTACCAAGCATATAACGTAATGCCAAGTTTAAGCAATGCTTTGAGGCGTTATGGTGCATGA

Protein sequence

MEAAPICTRLFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLLSRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSETWKPRSKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGA

Homology

[Close]

BLAST of CmaCh19G000470 vs. ExPASy Swiss-Prot
Match: F4IQV7 (Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SCY2 PE=2 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 1.8e-216
Identity = 393/540 (72.78%), Postives = 448/540 (82.96%), Query Frame = 0


Query: 35  RSAAVINFNSLKCKGRNNVLLSRPFVSKVNEKSFDC-LSNQCRSSRMNVKATSEQCLDLE 94
           R     N N  + +  +++ ++R  +     KSF    S++ R   M+ +      LD+E
Sbjct: 38  RKCLTTNLNMSRTRQGHSIQMNRRHLLMKERKSFSINYSDKFRDDSMSSEEMHTDALDVE 97

Query: 95  TFSQELNDGDVFFTSPNGTNSETWK-PRSKMFRNRFLNLVRLRSFLNNAAESFFKSEIRR 154
               +  D      S N   S T +  R K FRNRFL+ VR+ S LN AAE FFKSEIRR
Sbjct: 98  IIPPDSQD---IRNSQNSAVSNTLQDDRPKSFRNRFLDFVRISSVLNTAAERFFKSEIRR 157

Query: 155 RLFVTAVLIVISRIGYFIPLPGYDRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGIS 214
           RLFVTAVL+V+SR+GYFIPLPG+DRRLIPQDYLSFVSGSV+ELG+F  E+K+S FQLG+S
Sbjct: 158 RLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVEELGEFGAEIKLSLFQLGLS 217

Query: 215 PQIIASIIMQVLCHILPSLVKLRKEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYS 274
           PQIIASIIMQVLCH+LPSLVKLRKEGLDG EKIKSYIWW+S  FAIVEALV++  SL YS
Sbjct: 218 PQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYIWWLSFFFAIVEALVVAYTSLQYS 277

Query: 275 IYAANHRVKHVMVTTFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILSGYTETLYKM 334
           ++AA  +VKHVM+T+ LLVCGAMTMTW+CDTISESGFG GSSLIICVGIL+GYTETL+KM
Sbjct: 278 VFAATAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICVGILTGYTETLHKM 337

Query: 335 LSQLSGRTVIWWPYVLALLAIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITE 394
           L+Q+SG    W PY+L LL IFTVVTM+AVVVTEGCRKIKLQYYGFKLASA+RE SPITE
Sbjct: 338 LNQISGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFKLASASREGSPITE 397

Query: 395 VEPYIPFNINPAGMQPILTTTYLLAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYY 454
           VEPYIPFNINPAGMQP+LTTTYLLAFPSILAS+L S F +++KEILNPES++GA PWVYY
Sbjct: 398 VEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILNPESTVGAPPWVYY 457

Query: 455 LIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLL 514
            IYA FVFLFNIFDIANLPKEI+DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLL
Sbjct: 458 SIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLL 517

Query: 515 LSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 573
           LSFLAT S++LDHYLRSIN GF+IGFTSVLIIVGSIIELRRSY AYNVMPSLS AL+RYG
Sbjct: 518 LSFLATASTVLDHYLRSINQGFSIGFTSVLIIVGSIIELRRSYHAYNVMPSLSKALKRYG 574

[Close]

BLAST of CmaCh19G000470 vs. ExPASy Swiss-Prot
Match: P51297 (Protein translocase subunit SecY OS=Porphyra purpurea OX=2787 GN=secY PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.9e-44
Identity = 132/427 (30.91%), Postives = 226/427 (52.93%), Query Frame = 0


Query: 147 KSEIRRRLFVTAVLIVISRIGYFIPLPGYD--------RRLIPQDYLSFVSGSVDELGDF 206
           KS++R R+  T +L+V++R+G FIP+PG D         +    ++L+  SG     G F
Sbjct: 4   KSDLRNRIKFTLLLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 63

Query: 207 TTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRK-EGLDGQEKIKSYIWWMSLGFA 266
           +T   +  F LGI P I +SI+MQ+L  I+P L KL+K EG  G++KI     +++LG+A
Sbjct: 64  ST---IGIFALGIVPYINSSIVMQLLTKIIPDLEKLQKEEGELGRQKITQITRYLALGWA 123

Query: 267 IVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWICDTISESGFGQGSSLII 326
            +++  +S +  P   Y  N     V  +   L  G+M + W+ + I+E G G G+SL+I
Sbjct: 124 TLQSGAISIWVKP---YVFNWNFTFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 183

Query: 327 CVGILSG----YTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMWAVVVTEGCRKIKL 386
              I+SG    +T++ +   +  S  ++ +  +++    IF ++ +  + V EG R+IK+
Sbjct: 184 FQNIVSGLPKNFTQSFFD--ANYSNTSIKFGLFIV----IFLLMIIITIFVQEGTRRIKI 243

Query: 387 QYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILASVLNSTFWVH 446
                 +++     S I +   Y+P  +N  G+ PI+  +  +A P+ L  +  +TF + 
Sbjct: 244 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPAYLTQLTQNTFLLQ 303

Query: 447 VKEILNPESSIGAEPWVYYLIYAVFVFLFNIF--DIANLPKEISDYLNKMGARIPNIKPG 506
           V  +  P  S+      Y ++Y+V +  F+ F   I   P++I+  L KMGA IPNI+PG
Sbjct: 304 VLYLFCPNGSL------YLVLYSVLILFFSYFYTSIVMNPEDIATNLKKMGASIPNIRPG 363

Query: 507 KATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL 559
           +ATI+YL  I     F G   L  +A    +++   +  N    +G TS+LI+VG  I+ 
Sbjct: 364 QATIDYLQVILNRLTFLGATFLFTVALIPFIIEKVAQIQNLR-GLGATSLLILVGVAIDT 400

[Close]

BLAST of CmaCh19G000470 vs. ExPASy Swiss-Prot
Match: P77964 (Protein translocase subunit SecY OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=secY PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.9e-43
Identity = 141/446 (31.61%), Postives = 226/446 (50.67%), Query Frame = 0


Query: 140 NAAESFFK----SEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLIPQ--------DYLSF 199
           +A E+F +    + +R RL +T  L+++ R+G FIP+P  DR+   Q         +L+ 
Sbjct: 10  SAQETFLQMAQAAGLRGRLLITIGLLILVRVGIFIPVPDIDRQAFSQAINDNSVIGFLNI 69

Query: 200 VSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRK-EGLDGQEKIK 259
            +G     G  +T   +  F LGI P I ASIIMQ+L   +P+L  L+K EG  G+ KI 
Sbjct: 70  FTG-----GGLST---VGIFALGILPYINASIIMQLLTAAIPALEDLQKNEGEAGRRKIS 129

Query: 260 SYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWICDTISE 319
            Y  +++ G+ I++ L L+   L    YA N+    +  T   +  G+M + WI + I+E
Sbjct: 130 QYSRYIAFGWCIIQGLGLTVGLL--RPYANNYGPLFIFQTVLAITAGSMFVMWISELITE 189

Query: 320 SGFGQGSSLIICVGILSGYTETLYKML--SQLSGRTVIWWPYVLALLAIFTVVTMWAVVV 379
            G G G+SL+I V I++   +TL + +  +Q  GR  I    V+ L+ +F V+ +  V V
Sbjct: 190 RGIGNGASLLIFVNIVATLPQTLGQTIEYAQSGGRQSI--TAVVLLMLVFLVMIVGIVFV 249

Query: 380 TEGCRKIKLQYYGFKLASAARE--DSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSIL 439
            EG R+I        + SA R+       E   Y+P  +N  G+ PI+  + +L  PS L
Sbjct: 250 QEGTRRI-------PIISARRQVGKKLYRERTSYLPLRLNQGGVMPIIFASAVLILPSSL 309

Query: 440 ASVLNST--------FWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANL--PK 499
           A               +V +   L P +      WVY ++Y+V +F F+ F  + +  P+
Sbjct: 310 AGFATGNEGLGGFGEIFVQISNALRPGT------WVYTVVYSVMIFFFSYFYASLIVNPE 369

Query: 500 EISDYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINA 559
           ++S  L KMG+ IP I+PGK T +YL  +     F G + LSF+AT    ++     +  
Sbjct: 370 DVSKNLKKMGSSIPGIRPGKKTEQYLEGVLNRLTFLGAIFLSFVATLPIFVEQ-ATGVTT 429

[Close]

BLAST of CmaCh19G000470 vs. ExPASy Swiss-Prot
Match: O66491 (Protein translocase subunit SecY OS=Aquifex aeolicus (strain VF5) OX=224324 GN=secY PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 3.2e-43
Identity = 136/438 (31.05%), Postives = 223/438 (50.91%), Query Frame = 0


Query: 145 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLIPQDYLSFVSGSVDELGDFTTE--- 204
           F   E+R++   T ++ VI R+G  IP+PG +   + +D+L    GSV  L D  +    
Sbjct: 9   FELKELRQKFIFTLLMFVIYRLGSHIPIPGINPEAL-RDFLKAFEGSVFALYDIFSGGNL 68

Query: 205 MKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLD-GQEKIKSYIWWMSLGFAIVE 264
            +++ F LG+ P I ASI+MQ+L   +PSL +L KE  D G+ KI  Y  +++L  A V+
Sbjct: 69  GRLTVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQ 128

Query: 265 ALVLSCY----SLPYSI-YAANHRVKHVMVTTFLLVCGAMTMTWICDTISESGFGQGSSL 324
           +L ++ +      P  I    N  +  +++T   LV G M + WI D I+E G G G+SL
Sbjct: 129 SLGIAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASL 188

Query: 325 IICVGILSGYTETLYKMLSQLSGRTVIWWPYVLAL-LAIFTVVTMWAVVVTEGCRKIKLQ 384
           II  GI++ +   + +   ++  +T    P  L L +A+   + +  V V E  R+I +Q
Sbjct: 189 IIFAGIVANFPNAVIQFYEKV--KTGDIGPLTLLLIIALIIAIIVGIVYVQEAERRIPIQ 248

Query: 385 YYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILASVLNSTFWVHV 444
           Y G ++             + Y+P  INPAG+ PI+    LL  PS L + + + F   +
Sbjct: 249 YPGRQVGRQLYAGR-----KTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVI 308

Query: 445 KEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANL--PKEISDYLNKMGARIPNIKPGK 504
            ++  P +        Y  +Y  F+  F  F  A L  P E+++ L+K GA IP ++PG+
Sbjct: 309 ADMFQPGAIF------YNFLYVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPGQ 368

Query: 505 ATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIELR 564
            T++YL +I     F+G L LS +A    L+  +    N  F  G T+ LI+VG  ++  
Sbjct: 369 DTVKYLERIINRLIFFGALFLSVIALIPILISVW---FNIPFYFGGTTALIVVGVALDTF 428

Query: 565 RSYQAYNVMPSLSNALRR 571
           R  + Y +     + +RR
Sbjct: 429 RQIETYLIQKKYKSYVRR 429

[Close]

BLAST of CmaCh19G000470 vs. ExPASy Swiss-Prot
Match: Q1XDJ1 (Protein translocase subunit SecY OS=Pyropia yezoensis OX=2788 GN=secY PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.4e-43
Identity = 131/427 (30.68%), Postives = 223/427 (52.22%), Query Frame = 0


Query: 147 KSEIRRRLFVTAVLIVISRIGYFIPLPGYD--------RRLIPQDYLSFVSGSVDELGDF 206
           KS++R R+  T  L+V++R+G FIP+PG D         +    ++L+  SG     G F
Sbjct: 4   KSDLRNRIIFTLFLLVLARLGIFIPVPGIDHDAFYASVEKNTLVNFLNIFSG-----GGF 63

Query: 207 TTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRK-EGLDGQEKIKSYIWWMSLGFA 266
           +T   +  F LGI P I +SI+MQ+L  I+P+L KL+K EG  G++KI     +++LG+A
Sbjct: 64  ST---IGIFALGIVPYINSSIVMQLLTKIVPNLEKLQKEEGELGRQKITQITRYLALGWA 123

Query: 267 IVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWICDTISESGFGQGSSLII 326
            +++  +S +  P   Y  N     V  +   L  G+M + W+ + I+E G G G+SL+I
Sbjct: 124 TLQSGAISIWVKP---YVFNWNFAFVCESVLALTAGSMIIMWLSELITEKGIGNGASLLI 183

Query: 327 CVGILSG----YTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMWAVVVTEGCRKIKL 386
              I+SG    +T++ +   +  S  ++ +  ++    AIF ++ +  + V EG R+IK+
Sbjct: 184 FQNIVSGLPKNFTQSFFD--ASYSNASLKFGLFI----AIFLLMIIITICVQEGTRRIKI 243

Query: 387 QYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILASVLNSTFWVH 446
                 +++     S I +   Y+P  +N  G+ PI+  +  +A PS L  ++ +   + 
Sbjct: 244 ------ISARQLGKSSILDPNSYLPLKLNQGGVMPIVFASASMALPSYLTQIIQNKTLLQ 303

Query: 447 VKEILNPESSIGAEPWVYYLIYAVFVFLFNIF--DIANLPKEISDYLNKMGARIPNIKPG 506
           +  +  P  S+      Y L+Y   +  F+ F   I   P++I+  L KMGA IPNI+PG
Sbjct: 304 ILYLFCPNGSL------YLLLYCALILFFSYFYTSIVMNPEDIAINLKKMGASIPNIRPG 363

Query: 507 KATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIEL 559
           +ATI+YL  I     F G   L  +A    +++   +  N    +G TS+LI+VG  I+ 
Sbjct: 364 QATIDYLQVILNRLTFLGASFLFTVALIPFIIEKVTQIQNLR-GLGATSLLILVGVAIDT 400

[Close]

BLAST of CmaCh19G000470 vs. ExPASy TrEMBL
Match: A0A6J1HWW7 (preprotein translocase subunit SCY2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466991 PE=3 SV=1)

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 573/573 (100.00%), Postives = 573/573 (100.00%), Query Frame = 0


Query: 1   MEAAPICTRLFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLLSRPFV 60
           MEAAPICTRLFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLLSRPFV
Sbjct: 1   MEAAPICTRLFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLLSRPFV 60

Query: 61  SKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSETWKPR 120
           SKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSETWKPR
Sbjct: 61  SKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSETWKPR 120

Query: 121 SKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLI 180
           SKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLI
Sbjct: 121 SKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLI 180

Query: 181 PQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLD 240
           PQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLD
Sbjct: 181 PQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLD 240

Query: 241 GQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWI 300
           GQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWI
Sbjct: 241 GQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWI 300

Query: 301 CDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMW 360
           CDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMW
Sbjct: 301 CDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMW 360

Query: 361 AVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPS 420
           AVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPS
Sbjct: 361 AVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPS 420

Query: 421 ILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNK 480
           ILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNK
Sbjct: 421 ILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNK 480

Query: 481 MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS 540
           MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS
Sbjct: 481 MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS 540

Query: 541 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGA 574
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGA
Sbjct: 541 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGA 573

[Close]

BLAST of CmaCh19G000470 vs. ExPASy TrEMBL
Match: A0A6J1HFX8 (preprotein translocase subunit SCY2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463947 PE=3 SV=1)

HSP 1 Score: 1105.9 bits (2859), Expect = 0.0e+00
Identity = 562/577 (97.40%), Postives = 568/577 (98.44%), Query Frame = 0


Query: 1   MEAAPICTR-----LFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLL 60
           MEAAP+CTR     LFPTKPSKFRVAAAYDVQFCPLKFGRSA+VINFNSLK KGRNNVLL
Sbjct: 1   MEAAPLCTRLFPPALFPTKPSKFRVAAAYDVQFCPLKFGRSASVINFNSLKFKGRNNVLL 60

Query: 61  SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSE 120
           SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGD FFTSPNGTNS+
Sbjct: 61  SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDAFFTSPNGTNSD 120

Query: 121 TWKPRSKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180
           TWKPRSKMFRNRFLNLVRLRS LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY
Sbjct: 121 TWKPRSKMFRNRFLNLVRLRSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180

Query: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240
           DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR
Sbjct: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240

Query: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAM 300
           KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYS+YAA+HRVKHVMVTTFLLVCGAM
Sbjct: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSVYAASHRVKHVMVTTFLLVCGAM 300

Query: 301 TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFT 360
           TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGR+VIWWPYVLALL IFT
Sbjct: 301 TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRSVIWWPYVLALLGIFT 360

Query: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420
           VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL
Sbjct: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420

Query: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480
           LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS
Sbjct: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480

Query: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540
           DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA
Sbjct: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540

Query: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 573
           IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG
Sbjct: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 577

[Close]

BLAST of CmaCh19G000470 vs. ExPASy TrEMBL
Match: A0A1S3BM25 (preprotein translocase subunit SCY2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491333 PE=3 SV=1)

HSP 1 Score: 1032.7 bits (2669), Expect = 5.7e-298
Identity = 520/577 (90.12%), Postives = 543/577 (94.11%), Query Frame = 0


Query: 1   MEAAPICTR-----LFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLL 60
           MEA P CTR     L  +  SKFRVAAAYDVQFC  KFGRS  VINFN+ K KGRNNVLL
Sbjct: 1   MEATPCCTRLLRPPLLHSVHSKFRVAAAYDVQFCHFKFGRSTPVINFNTSKFKGRNNVLL 60

Query: 61  SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSE 120
            RP VSK+N+KSFDC SNQC++SRMNVKATSEQCLDLETFSQE NDGD F TS NGTN +
Sbjct: 61  KRPLVSKMNQKSFDCFSNQCQNSRMNVKATSEQCLDLETFSQESNDGDAFLTSSNGTNFD 120

Query: 121 TWKPRSKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180
            WKP+S+ FRNRFLNLVRLRS LNNAAESFFKSEIRRRLFVTAVLIVISR+GYFIPLPG+
Sbjct: 121 IWKPKSRAFRNRFLNLVRLRSVLNNAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGF 180

Query: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240
           DRRLIPQDYLSFVSGS DELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR
Sbjct: 181 DRRLIPQDYLSFVSGSADELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240

Query: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAM 300
           KEGLDG EKIKSYIWWMSLGFAI+EALVLSCYSLPYSIYAANHRVKHVMVT+FLLVCGAM
Sbjct: 241 KEGLDGHEKIKSYIWWMSLGFAILEALVLSCYSLPYSIYAANHRVKHVMVTSFLLVCGAM 300

Query: 301 TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFT 360
           TMTWICDTISESGFGQGSSLIICVGIL+GYTETLYKMLSQLSGR V+WWPYVLALL IFT
Sbjct: 301 TMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGRAVVWWPYVLALLGIFT 360

Query: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420
           +VTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL
Sbjct: 361 IVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420

Query: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480
           LAFPS+LAS+L STFW HVKEILNPESSIGAEPWV+YL+YAVFVFLFNIFDIANLPKEIS
Sbjct: 421 LAFPSVLASLLKSTFWEHVKEILNPESSIGAEPWVFYLLYAVFVFLFNIFDIANLPKEIS 480

Query: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540
           DYLNKMGARIPNIKPGKA+IEYLTK+QASTRFWGGLLLSFLATTSSLLDHYLRS+NAGFA
Sbjct: 481 DYLNKMGARIPNIKPGKASIEYLTKVQASTRFWGGLLLSFLATTSSLLDHYLRSVNAGFA 540

Query: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 573
           IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG
Sbjct: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 577

[Close]

BLAST of CmaCh19G000470 vs. ExPASy TrEMBL
Match: A0A6J1DS34 (preprotein translocase subunit SCY2, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022689 PE=3 SV=1)

HSP 1 Score: 996.1 bits (2574), Expect = 6.0e-287
Identity = 503/563 (89.34%), Postives = 529/563 (93.96%), Query Frame = 0


Query: 10  LFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLLSRPFVSKVNEKSFD 69
           LFPT+ SKFRVA AYDV+FC L+FGRS+ VIN  SL+ KGR + L +R F  KVN+KSF+
Sbjct: 17  LFPTRTSKFRVAVAYDVRFCRLQFGRSSTVINSKSLEFKGRTHXLSNRHFAYKVNQKSFE 76

Query: 70  CLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSETWKPRSKMFRNRFL 129
           CLSNQC+SS +NVKATSEQCLDLETF QE  DGD F TSPNG++ +TWKPRS+ F NRFL
Sbjct: 77  CLSNQCQSSHLNVKATSEQCLDLETFPQESQDGDAFLTSPNGSDFDTWKPRSQKFMNRFL 136

Query: 130 NLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLIPQDYLSFVS 189
           NLVRLRS LNNAAESFFKSEIRRRLFVTAVLIVISR+GYFIPLPG+DRRLIPQDYLSFVS
Sbjct: 137 NLVRLRSVLNNAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYLSFVS 196

Query: 190 GSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLDGQEKIKSYI 249
           GSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHI+PSLVKLRKEGLDG EKIKSYI
Sbjct: 197 GSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHIVPSLVKLRKEGLDGHEKIKSYI 256

Query: 250 WWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWICDTISESGF 309
           WWMSLGFAI+EAL+LSCYSLPYSIYAANHRVKHVMVT+ LLVCGAMTMTWICDTISESGF
Sbjct: 257 WWMSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSLLLVCGAMTMTWICDTISESGF 316

Query: 310 GQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMWAVVVTEGCR 369
           G GSSLIICVGIL+GYTETLYKMLSQLSGR VIW PYVL LL IFT+VTMWAVVVTEGCR
Sbjct: 317 GXGSSLIICVGILTGYTETLYKMLSQLSGRAVIWLPYVLTLLGIFTIVTMWAVVVTEGCR 376

Query: 370 KIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILASVLNST 429
           KIKLQYYGFKLASAAR+DSPITEVEPYIPFNINPAGMQPILTTTYLLA PSILAS+LNST
Sbjct: 377 KIKLQYYGFKLASAARDDSPITEVEPYIPFNINPAGMQPILTTTYLLASPSILASLLNST 436

Query: 430 FWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIK 489
           FW HVKEILNPESSIGAEPWVYY IYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIK
Sbjct: 437 FWEHVKEILNPESSIGAEPWVYYSIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIK 496

Query: 490 PGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSII 549
           PGKATIEYLTKIQASTRFWGGLLLS LATTSS+LDHYLRSINAGFAIGFTSVLIIVGSII
Sbjct: 497 PGKATIEYLTKIQASTRFWGGLLLSILATTSSVLDHYLRSINAGFAIGFTSVLIIVGSII 556

Query: 550 ELRRSYQAYNVMPSLSNALRRYG 573
           ELRRSYQAYNVMPSLSNALRRYG
Sbjct: 557 ELRRSYQAYNVMPSLSNALRRYG 579

[Close]

BLAST of CmaCh19G000470 vs. ExPASy TrEMBL
Match: A0A6J1DMV0 (preprotein translocase subunit SCY2, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022689 PE=3 SV=1)

HSP 1 Score: 982.6 bits (2539), Expect = 6.8e-283
Identity = 496/556 (89.21%), Postives = 523/556 (94.06%), Query Frame = 0


Query: 17  KFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLLSRPFVSKVNEKSFDCLSNQCR 76
           K++VA AYDV+FC L+FGRS+ VIN  SL+ KGR + L +R F  KVN+KSF+CLSNQC+
Sbjct: 30  KWKVAVAYDVRFCRLQFGRSSTVINSKSLEFKGRTHXLSNRHFAYKVNQKSFECLSNQCQ 89

Query: 77  SSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSETWKPRSKMFRNRFLNLVRLRS 136
           SS +NVKATSEQCLDLETF QE  DGD F TSPNG++ +TWKPRS+ F NRFLNLVRLRS
Sbjct: 90  SSHLNVKATSEQCLDLETFPQESQDGDAFLTSPNGSDFDTWKPRSQKFMNRFLNLVRLRS 149

Query: 137 FLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLIPQDYLSFVSGSVDELG 196
            LNNAAESFFKSEIRRRLFVTAVLIVISR+GYFIPLPG+DRRLIPQDYLSFVSGSVDELG
Sbjct: 150 VLNNAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYLSFVSGSVDELG 209

Query: 197 DFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLDGQEKIKSYIWWMSLGF 256
           DFTTEMKMSFFQLGISPQIIASIIMQVLCHI+PSLVKLRKEGLDG EKIKSYIWWMSLGF
Sbjct: 210 DFTTEMKMSFFQLGISPQIIASIIMQVLCHIVPSLVKLRKEGLDGHEKIKSYIWWMSLGF 269

Query: 257 AIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWICDTISESGFGQGSSLI 316
           AI+EAL+LSCYSLPYSIYAANHRVKHVMVT+ LLVCGAMTMTWICDTISESGFG GSSLI
Sbjct: 270 AILEALILSCYSLPYSIYAANHRVKHVMVTSLLLVCGAMTMTWICDTISESGFGXGSSLI 329

Query: 317 ICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMWAVVVTEGCRKIKLQYY 376
           ICVGIL+GYTETLYKMLSQLSGR VIW PYVL LL IFT+VTMWAVVVTEGCRKIKLQYY
Sbjct: 330 ICVGILTGYTETLYKMLSQLSGRAVIWLPYVLTLLGIFTIVTMWAVVVTEGCRKIKLQYY 389

Query: 377 GFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILASVLNSTFWVHVKE 436
           GFKLASAAR+DSPITEVEPYIPFNINPAGMQPILTTTYLLA PSILAS+LNSTFW HVKE
Sbjct: 390 GFKLASAARDDSPITEVEPYIPFNINPAGMQPILTTTYLLASPSILASLLNSTFWEHVKE 449

Query: 437 ILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKATIE 496
           ILNPESSIGAEPWVYY IYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKATIE
Sbjct: 450 ILNPESSIGAEPWVYYSIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKATIE 509

Query: 497 YLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIELRRSYQ 556
           YLTKIQASTRFWGGLLLS LATTSS+LDHYLRSINAGFAIGFTSVLIIVGSIIELRRSYQ
Sbjct: 510 YLTKIQASTRFWGGLLLSILATTSSVLDHYLRSINAGFAIGFTSVLIIVGSIIELRRSYQ 569

Query: 557 AYNVMPSLSNALRRYG 573
           AYNVMPSLSNALRRYG
Sbjct: 570 AYNVMPSLSNALRRYG 585

[Close]

BLAST of CmaCh19G000470 vs. NCBI nr
Match: XP_022967504.1 (preprotein translocase subunit SCY2, chloroplastic [Cucurbita maxima] >XP_022967506.1 preprotein translocase subunit SCY2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 573/573 (100.00%), Postives = 573/573 (100.00%), Query Frame = 0


Query: 1   MEAAPICTRLFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLLSRPFV 60
           MEAAPICTRLFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLLSRPFV
Sbjct: 1   MEAAPICTRLFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLLSRPFV 60

Query: 61  SKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSETWKPR 120
           SKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSETWKPR
Sbjct: 61  SKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSETWKPR 120

Query: 121 SKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLI 180
           SKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLI
Sbjct: 121 SKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRLI 180

Query: 181 PQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLD 240
           PQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLD
Sbjct: 181 PQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLRKEGLD 240

Query: 241 GQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWI 300
           GQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWI
Sbjct: 241 GQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWI 300

Query: 301 CDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMW 360
           CDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMW
Sbjct: 301 CDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMW 360

Query: 361 AVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPS 420
           AVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPS
Sbjct: 361 AVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPS 420

Query: 421 ILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNK 480
           ILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNK
Sbjct: 421 ILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNK 480

Query: 481 MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS 540
           MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS
Sbjct: 481 MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS 540

Query: 541 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGA 574
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGA
Sbjct: 541 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGA 573

[Close]

BLAST of CmaCh19G000470 vs. NCBI nr
Match: KAG6571476.1 (Preprotein translocase subunit SCY2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1106.3 bits (2860), Expect = 0.0e+00
Identity = 562/577 (97.40%), Postives = 566/577 (98.09%), Query Frame = 0


Query: 1   MEAAPICTR-----LFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLL 60
           MEAAP+CTR     LFPTKPSKFRVAAAYDVQFCPLKFGRSAA+INFNSLK KGRNNVLL
Sbjct: 1   MEAAPLCTRLFPPALFPTKPSKFRVAAAYDVQFCPLKFGRSAAIINFNSLKFKGRNNVLL 60

Query: 61  SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSE 120
           SRPFV KVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGD FFTSPNGTNS+
Sbjct: 61  SRPFVPKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDAFFTSPNGTNSD 120

Query: 121 TWKPRSKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180
           TWKPRSKMFRNRFLNLVRLRS LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY
Sbjct: 121 TWKPRSKMFRNRFLNLVRLRSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180

Query: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240
           DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR
Sbjct: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240

Query: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAM 300
           KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYS+YAANHRVKHVMVTTFLLVCGAM
Sbjct: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSVYAANHRVKHVMVTTFLLVCGAM 300

Query: 301 TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFT 360
           TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGR VIWWPYVLALL IFT
Sbjct: 301 TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRAVIWWPYVLALLGIFT 360

Query: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420
           VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL
Sbjct: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420

Query: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480
           LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS
Sbjct: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480

Query: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540
           DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA
Sbjct: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540

Query: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 573
           IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG
Sbjct: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 577

[Close]

BLAST of CmaCh19G000470 vs. NCBI nr
Match: XP_022963692.1 (preprotein translocase subunit SCY2, chloroplastic [Cucurbita moschata] >XP_022963693.1 preprotein translocase subunit SCY2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1105.9 bits (2859), Expect = 0.0e+00
Identity = 562/577 (97.40%), Postives = 568/577 (98.44%), Query Frame = 0


Query: 1   MEAAPICTR-----LFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLL 60
           MEAAP+CTR     LFPTKPSKFRVAAAYDVQFCPLKFGRSA+VINFNSLK KGRNNVLL
Sbjct: 1   MEAAPLCTRLFPPALFPTKPSKFRVAAAYDVQFCPLKFGRSASVINFNSLKFKGRNNVLL 60

Query: 61  SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSE 120
           SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGD FFTSPNGTNS+
Sbjct: 61  SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDAFFTSPNGTNSD 120

Query: 121 TWKPRSKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180
           TWKPRSKMFRNRFLNLVRLRS LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY
Sbjct: 121 TWKPRSKMFRNRFLNLVRLRSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180

Query: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240
           DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR
Sbjct: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240

Query: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAM 300
           KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYS+YAA+HRVKHVMVTTFLLVCGAM
Sbjct: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSVYAASHRVKHVMVTTFLLVCGAM 300

Query: 301 TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFT 360
           TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGR+VIWWPYVLALL IFT
Sbjct: 301 TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRSVIWWPYVLALLGIFT 360

Query: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420
           VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL
Sbjct: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420

Query: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480
           LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS
Sbjct: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480

Query: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540
           DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA
Sbjct: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540

Query: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 573
           IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG
Sbjct: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 577

[Close]

BLAST of CmaCh19G000470 vs. NCBI nr
Match: XP_023553756.1 (preprotein translocase subunit SCY2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023553757.1 preprotein translocase subunit SCY2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 561/577 (97.23%), Postives = 564/577 (97.75%), Query Frame = 0


Query: 1   MEAAPICTR-----LFPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLL 60
           MEAAP+CTR     LFPT PSKFRVAAAYDVQFCPLKFGRSAAVINFNSLK KGRNNVLL
Sbjct: 1   MEAAPLCTRLFPPALFPTTPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKFKGRNNVLL 60

Query: 61  SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSE 120
           SRPFVSKVNEKSFDCLSNQCR SRMNV ATSEQCLDLETFSQELNDGD FFTSPNGTNS+
Sbjct: 61  SRPFVSKVNEKSFDCLSNQCRRSRMNVNATSEQCLDLETFSQELNDGDAFFTSPNGTNSD 120

Query: 121 TWKPRSKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180
           TWKPRSKMFRNRFLNLVRLRS LNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY
Sbjct: 121 TWKPRSKMFRNRFLNLVRLRSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180

Query: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240
           DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR
Sbjct: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240

Query: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAM 300
           KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAM
Sbjct: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAM 300

Query: 301 TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFT 360
           TMTWICDTISESGFGQGSSLIIC+GILSGYTETLYKMLSQLSGR VIWWPYVLALL IFT
Sbjct: 301 TMTWICDTISESGFGQGSSLIICIGILSGYTETLYKMLSQLSGRAVIWWPYVLALLGIFT 360

Query: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420
           VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL
Sbjct: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420

Query: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480
           LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS
Sbjct: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480

Query: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540
           DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA
Sbjct: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540

Query: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 573
           IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG
Sbjct: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 577

[Close]

BLAST of CmaCh19G000470 vs. NCBI nr
Match: XP_038888194.1 (preprotein translocase subunit SCY2, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1047.3 bits (2707), Expect = 4.7e-302
Identity = 531/577 (92.03%), Postives = 546/577 (94.63%), Query Frame = 0


Query: 1   MEAAPICTRL-----FPTKPSKFRVAAAYDVQFCPLKFGRSAAVINFNSLKCKGRNNVLL 60
           ME  P CTRL     FPT PSKF VAA+YDVQFC  KFGRSA VINFN LK KGRNNVLL
Sbjct: 1   METTPHCTRLLRPAPFPTIPSKFLVAASYDVQFCHFKFGRSATVINFNPLKFKGRNNVLL 60

Query: 61  SRPFVSKVNEKSFDCLSNQCRSSRMNVKATSEQCLDLETFSQELNDGDVFFTSPNGTNSE 120
           +RP VSKVN+KS DCLSNQC+SSRMNVKATSEQCLDL+TFSQE NDGD F TSPN TN +
Sbjct: 61  NRPLVSKVNQKSSDCLSNQCQSSRMNVKATSEQCLDLQTFSQESNDGDAFLTSPNATNFD 120

Query: 121 TWKPRSKMFRNRFLNLVRLRSFLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPGY 180
            WKP+SKMFRNRFLNLVRLRS LNNAAESFFKSEIRRRLFVTAVLIVISR+GYFIPLPG+
Sbjct: 121 IWKPKSKMFRNRFLNLVRLRSVLNNAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGF 180

Query: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240
           DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR
Sbjct: 181 DRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKLR 240

Query: 241 KEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAM 300
           KEGLDG EKIKSYIWWMSLGFAI+EAL+LSCYSLPYSIYAANHRVKHVMVT+FLLVCGAM
Sbjct: 241 KEGLDGHEKIKSYIWWMSLGFAILEALILSCYSLPYSIYAANHRVKHVMVTSFLLVCGAM 300

Query: 301 TMTWICDTISESGFGQGSSLIICVGILSGYTETLYKMLSQLSGRTVIWWPYVLALLAIFT 360
           TMTWICDTISESGFGQGSSLIICVGIL+GYTETLYKMLSQLSG  V WWPYV ALL IFT
Sbjct: 301 TMTWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLSGHAVFWWPYVFALLGIFT 360

Query: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420
           VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL
Sbjct: 361 VVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYL 420

Query: 421 LAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480
           LAFPSILAS+LNSTFW HVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS
Sbjct: 421 LAFPSILASLLNSTFWEHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEIS 480

Query: 481 DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540
           DYLNKMGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA
Sbjct: 481 DYLNKMGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFA 540

Query: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 573
           IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG
Sbjct: 541 IGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 577

[Close]

BLAST of CmaCh19G000470 vs. TAIR 10
Match: AT2G31530.1 (SecY protein transport family protein )

HSP 1 Score: 753.4 bits (1944), Expect = 1.3e-217
Identity = 393/540 (72.78%), Postives = 448/540 (82.96%), Query Frame = 0


Query: 35  RSAAVINFNSLKCKGRNNVLLSRPFVSKVNEKSFDC-LSNQCRSSRMNVKATSEQCLDLE 94
           R     N N  + +  +++ ++R  +     KSF    S++ R   M+ +      LD+E
Sbjct: 38  RKCLTTNLNMSRTRQGHSIQMNRRHLLMKERKSFSINYSDKFRDDSMSSEEMHTDALDVE 97

Query: 95  TFSQELNDGDVFFTSPNGTNSETWK-PRSKMFRNRFLNLVRLRSFLNNAAESFFKSEIRR 154
               +  D      S N   S T +  R K FRNRFL+ VR+ S LN AAE FFKSEIRR
Sbjct: 98  IIPPDSQD---IRNSQNSAVSNTLQDDRPKSFRNRFLDFVRISSVLNTAAERFFKSEIRR 157

Query: 155 RLFVTAVLIVISRIGYFIPLPGYDRRLIPQDYLSFVSGSVDELGDFTTEMKMSFFQLGIS 214
           RLFVTAVL+V+SR+GYFIPLPG+DRRLIPQDYLSFVSGSV+ELG+F  E+K+S FQLG+S
Sbjct: 158 RLFVTAVLLVLSRVGYFIPLPGFDRRLIPQDYLSFVSGSVEELGEFGAEIKLSLFQLGLS 217

Query: 215 PQIIASIIMQVLCHILPSLVKLRKEGLDGQEKIKSYIWWMSLGFAIVEALVLSCYSLPYS 274
           PQIIASIIMQVLCH+LPSLVKLRKEGLDG EKIKSYIWW+S  FAIVEALV++  SL YS
Sbjct: 218 PQIIASIIMQVLCHVLPSLVKLRKEGLDGHEKIKSYIWWLSFFFAIVEALVVAYTSLQYS 277

Query: 275 IYAANHRVKHVMVTTFLLVCGAMTMTWICDTISESGFGQGSSLIICVGILSGYTETLYKM 334
           ++AA  +VKHVM+T+ LLVCGAMTMTW+CDTISESGFG GSSLIICVGIL+GYTETL+KM
Sbjct: 278 VFAATAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGSSLIICVGILTGYTETLHKM 337

Query: 335 LSQLSGRTVIWWPYVLALLAIFTVVTMWAVVVTEGCRKIKLQYYGFKLASAAREDSPITE 394
           L+Q+SG    W PY+L LL IFTVVTM+AVVVTEGCRKIKLQYYGFKLASA+RE SPITE
Sbjct: 338 LNQISGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKIKLQYYGFKLASASREGSPITE 397

Query: 395 VEPYIPFNINPAGMQPILTTTYLLAFPSILASVLNSTFWVHVKEILNPESSIGAEPWVYY 454
           VEPYIPFNINPAGMQP+LTTTYLLAFPSILAS+L S F +++KEILNPES++GA PWVYY
Sbjct: 398 VEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFLLNMKEILNPESTVGAPPWVYY 457

Query: 455 LIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLL 514
            IYA FVFLFNIFDIANLPKEI+DYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLL
Sbjct: 458 SIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLTKIQASTRFWGGLL 517

Query: 515 LSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYG 573
           LSFLAT S++LDHYLRSIN GF+IGFTSVLIIVGSIIELRRSY AYNVMPSLS AL+RYG
Sbjct: 518 LSFLATASTVLDHYLRSINQGFSIGFTSVLIIVGSIIELRRSYHAYNVMPSLSKALKRYG 574

[Close]

BLAST of CmaCh19G000470 vs. TAIR 10
Match: AT2G18710.1 (SECY homolog 1 )

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-31
Identity = 124/438 (28.31%), Postives = 197/438 (44.98%), Query Frame = 0


Query: 145 FFKSEIRRRLFVTAVLIVISRIGYFIPLPGYDRRL----IPQDYL-----SFVSGSVDEL 204
           FFK  +  +       + +SR+G +IPL G +R      + Q+ +     +F  G +  L
Sbjct: 133 FFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDQNSILSTLDTFSGGGIGRL 192

Query: 205 GDFTTEMKMSFFQLGISPQIIASIIMQVLCHILPSLVKL-RKEGLDGQEKIKSYIWWMSL 264
           G            LGI P I A I+ Q+L  + P L  L +KEG  G++KI  Y  + S+
Sbjct: 193 G---------ICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYASV 252

Query: 265 GFAIVEALVLSCYSLPYSIYAANHRVKHVMVTTFLLVCGAMTMTWICDTISESGFGQGSS 324
           GFAIV+A+    Y  P   Y  +   + V+ +  LL  G++  T+I + IS+   G G+S
Sbjct: 253 GFAIVQAIGQVFYLRP---YVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTS 312

Query: 325 LIICVGILS------GYTETLYKMLSQLSGRTVIWWPYVLALLAIFTVVTMWAVVVTEGC 384
           L+I   I+S      G T          +G   I   ++L +L I        V V E  
Sbjct: 313 LLIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSFLLLVLGI--------VYVQEAE 372

Query: 385 RKIKLQYYGFKLASAAREDSPITEVEPYIPFNINPAGMQPILTTTYLLAFPSILASVLNS 444
           RKI L Y     AS     +   +   Y+PF +N AG+ PI+ +T  LA P+ LA     
Sbjct: 373 RKIPLNY-----ASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGI 432

Query: 445 TFWVHVKEILNPESSIGAEPWVYYLIYAVFVFLFNIFDIANLPKEISDYLNKMGARIPNI 504
           +   +V   L P  S      +  + +  + + F   D    P ++S+ L + GA IP +
Sbjct: 433 SALKNVAFALTPGGSFYLPTNILLIAFFNYYYTFLQLD----PDDVSEQLKRQGASIPLV 492

Query: 505 KPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTSVLIIVGSI 564
           +PGK+T  ++  +       G   L+ LA   ++++  +  + A      TSVLI+VG  
Sbjct: 493 RPGKSTALFIKTVLGRISVLGSAFLAVLAAGPAVVEQ-ITHLTAFRGFAGTSVLILVGCA 540

Query: 565 IELRRSYQAYNVMPSLSN 567
            +  R  QA  +     N
Sbjct: 553 TDTARKVQAEIISQKYKN 540

The following BLAST results are available for this feature:

BLAST of CmaCh19G000470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IQV7	1.8e-216	72.78	Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
P51297	4.9e-44	30.91	Protein translocase subunit SecY OS=Porphyra purpurea OX=2787 GN=secY PE=3 SV=1	[more]
P77964	1.9e-43	31.61	Protein translocase subunit SecY OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
O66491	3.2e-43	31.05	Protein translocase subunit SecY OS=Aquifex aeolicus (strain VF5) OX=224324 GN=s...	[more]
Q1XDJ1	5.4e-43	30.68	Protein translocase subunit SecY OS=Pyropia yezoensis OX=2788 GN=secY PE=3 SV=1	[more]

BLAST of CmaCh19G000470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HWW7	0.0e+00	100.00	preprotein translocase subunit SCY2, chloroplastic OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1HFX8	0.0e+00	97.40	preprotein translocase subunit SCY2, chloroplastic OS=Cucurbita moschata OX=3662...	[more]
A0A1S3BM25	5.7e-298	90.12	preprotein translocase subunit SCY2, chloroplastic OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1DS34	6.0e-287	89.34	preprotein translocase subunit SCY2, chloroplastic isoform X2 OS=Momordica chara...	[more]
A0A6J1DMV0	6.8e-283	89.21	preprotein translocase subunit SCY2, chloroplastic isoform X1 OS=Momordica chara...	[more]

BLAST of CmaCh19G000470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967504.1	0.0e+00	100.00	preprotein translocase subunit SCY2, chloroplastic [Cucurbita maxima] >XP_022967...	[more]
KAG6571476.1	0.0e+00	97.40	Preprotein translocase subunit SCY2, chloroplastic, partial [Cucurbita argyrospe...	[more]
XP_022963692.1	0.0e+00	97.40	preprotein translocase subunit SCY2, chloroplastic [Cucurbita moschata] >XP_0229...	[more]
XP_023553756.1	0.0e+00	97.23	preprotein translocase subunit SCY2, chloroplastic [Cucurbita pepo subsp. pepo] ...	[more]
XP_038888194.1	4.7e-302	92.03	preprotein translocase subunit SCY2, chloroplastic isoform X1 [Benincasa hispida...	[more]

BLAST of CmaCh19G000470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31530.1	1.3e-217	72.78	SecY protein transport family protein	[more]
AT2G18710.1	2.2e-31	28.31	SECY homolog 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00303	SECYTRNLCASE	coord: 280..305 score: 21.63 coord: 404..423 score: 30.5 coord: 154..172 score: 36.71 coord: 245..268 score: 19.06 coord: 449..471 score: 22.28 coord: 306..329 score: 38.12 coord: 537..555 score: 38.29 coord: 204..224 score: 53.81
None	No IPR available	PANTHER	PTHR10906:SF2	PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC	coord: 128..572
IPR002208	SecY/SEC61-alpha family	PFAM	PF00344	SecY	coord: 205..551 e-value: 1.9E-68 score: 231.0
IPR002208	SecY/SEC61-alpha family	PANTHER	PTHR10906	SECY/SEC61-ALPHA FAMILY MEMBER	coord: 128..572
IPR023201	SecY domain superfamily	GENE3D	1.10.3370.10	SecY subunit domain	coord: 137..563 e-value: 8.4E-108 score: 362.9
IPR023201	SecY domain superfamily	SUPERFAMILY	103491	Preprotein translocase SecY subunit	coord: 134..558

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000470.1	CmaCh19G000470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0072598	protein localization to chloroplast
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0015031	protein transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008320	protein transmembrane transporter activity
molecular_function	GO:0005048	signal sequence binding