CmaCh19G000010 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh19G000010
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionmitochondrial import inner membrane translocase subunit PAM16 like 2-like
LocationCma_Chr19: 4328 .. 12591 (+)
RNA-Seq ExpressionCmaCh19G000010
SyntenyCmaCh19G000010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACGATTCGCCCCTACGATTTCCTGCGTGGTTCGCTAAATAACCTTTCTGATTGATTTCGTAGCTCTAGCGGCTTTAACAAATCCGGACCTGTTATCAAGGCCAGCCAATTAATCATGGTATCTCTATTCTTTCTTTCTCTCCTCCTCCTCTCACTTTATGGTGGATCGATTTCTAAGATTATGAGAAAATGAACATTGAACAGGTGCCGATGTATAAATATATTTGATGTTGTTAATCTTATCTGAAATATTATGTATCTGTCTCCTACGTTTGGTAATTTGTTTCCAGATTGATTATAGATTATGGATTTAATCGGAAGTTTCATTTTGTTGTCAAAATGAGTGCAACTTATTTTAGATGGAATTAGTAAGTTGTTAAGTCATTCATCCTTATTAGGAGGAATAGTTTATTTCAGTAGAGTTTTTGTAGGAGCTATTTATCGGATTTATTTTTGTTTAAATAGGAGCCCTCCACGTAGTAAAACACAAGGCATGGTAAACCGTTCATTATTTCAATTGTCCCTGTATTACCCTTTTTGAGTAATAATAGTTTCATATTTATTCACACCTTTGAGCGTGAGATATTGTGACAGTTGGTATCAGAGCCAAGTTGGTACGGTTTGATATTATTACTCAACGAGATGAACGGTGGAAGTGCTTCTATGGGTATAGCTATGGAAAAGATGGTTGGCAATAACTATAATTATTGGAAGTTATGTATGAAAGGTTATCTATAGGGACAAGATTTGTGGGATTTAATCGAAAGTGATGACACAGAAATTCCAGCCGACACTCCACAAAATGCTGAATTATGTCGAAAATGGAAAATCAAGTGTGGAAAAGCCTTATTCACCTTGCGAACTCTTATTAGCAAGGAATATATTGATCATGTTCGTGATTTAAAGTCACCAAAGCAAGTATGGGAAACCCTTCAAAAGTTGTTCACCAAGAAAAATACAGCTCGATTGCAATTTCTAGAGAATGAATTGGCTGTGGTAACTCAAGGTAATTTTTTTGTTGAAGAATATTTTTTGAAAGTGAAAAATTTGTGCTCTGAAATTTCAGAATTAGATGCTAAGGAACCAGTGAGTGAGGCTCGATTACGGCGTTATCTTACTCGTGGATTACGGAAAGAGTTTATGCCCTTTGTTTCCTCAATACAAGGGTGGGCAAATCAACCTACAGTAATTGAACTGGAGAATCTTCTTTCCAATCAGGAAGCCTTGATTAAGCAAATGACCAGCAACAACGAATTTTCCCGAAAGTCAGAAAATGTGTTGTATGTCAAAGATCAAAGGAGACAAAATTTTCATTCAAAGCCTTCATCTAGCAATGGGAATCAATTCAGAAATGAGGAGTCGTCAAAGAAGTCATTTAAAGCTTGTTACAGGTGTGGAAAATCAAGCCACTTTAAACGAGATTGTCAGGCGAAAGTGGTGTGTGATCGTTGCGGAAAGTCAGGTCATATTAAGCCAAATTGCCGAGTCAAAATGCAAGAATCAGCAGCAAATGCTGTACATGAAAGTTTTTCAGATTCAATTTGGGAATACTGCTTAACCACCGGGGTTCTTGATCAGCCAACAAATGTGACTTCAGCCATATATCAAGATGATGTCTCTACAGGTGATCAAAATTCTAATTCCACTACTTATGCTTCTGAATTTGATTCTCTCCAAATTTTGCCTCTGCACTCTTTTTTTTACTCCGATGCCAATTCTGTTGCCCCTGGTGACCCTTCTGTTTATTTCACGACCTTGGATTTGGGATTCGACGAAAATAAAGATTTCGAACTAACCTTTGACGATCTTGACGCCTCTGAGGCTGACGTTTTTCTCATCTCCGAAGATTTGGATCAAACTACCAATTTGTTAGACTTGCAGGCTGACCGGGGAGCTTCTGGGGGCGCTGCTGAAAGTGAGAATCTAGACCAAGTTCAGAAAGGCAATGTTGTGGTAGAGGCTGAGTTGTTGGATAAGAGCATGGATGTGGCTAAAGAGAGAGAAGCTTGCAGGGATGATGCTGGTTTATCAGAAAGTCGGAATGTATCGATTGATTTGGGGAATTGTACTAAGAATGAACGTGATGTTGTGGCTGACGAAGGTGACAAATTGGAAGACAATTTGGTTGGTGAAAGAGAACAAGGTAATGGGATGGATGACAAGAACTCGTTAGAATCTTCAGTTCAATTGGATGACGAGTGCAAGGAAAGCAAGGGCCTCGATCAAGAAGTGAAAACTAGGAATTTTGATGTATCAGATAAAGAGGTAGAAAAAGAAATGTCATATGGAGAGACAACAAAAACTACCAAAACACTGACTCAAAATTTTAGAGATAAAGGTATGAGGGTGGCAGAAACTTTAAAAAATAAAAAGAAAAAGAAGAGTGAAAGGACTACTCAAGAAGAAGATGATTTGGATAAGATTCTTGCTAAGCTAGGAGGGTGGCCTATTATATCAAAACCAGCCGACCCTCCTCTTTCTTCACAAGAGGCCAAAGTTGAGAACCCACCTGACCTTGTAACTCCTCCTGATGCATAGTTGAAAAGGAAGCTGAAGAAGAGAGCACAGAAACGACGGTTGCTAGGAAGAAGAAAAAACGTAGGCAAAAGAAAAGAGAAAAAGAGAAGCTGCTAAAGAACAAACAAGAAAGCAAGCTGTTAACAAGGAAACAAAGTGCAGTTTGAATTTTTTCGCTCTCCGAGTTATTAAGAAATAAGTTTGCACCAAGGGAGGCTGTCAAAATTAGTGCAACTCATTTTAGATAGAATTAGTAAGTTGTTAAGCCATTCATCCTTATTAGGAGGAATAGTTTATTTTAGTAGAGTTTTTGTAGGAGCTATTTATAGAATTTATTTGGGTTTAAATAGGAGCCCTCCCCTTAGTAAAACACAAGGTATAGTAAACAGTTCATTATTTCAATTGTCCATGTATTACCCTCTTTGAGTAATAATAGTTTCATATTTATTCACACCTTTCAGCGTGAGATATTGTGACAATCAGTGGGGCGAATGCGCCCGAGAAAGTCATCGAGGACGATGACTTAATTAAGTAGAGGAGAATGTCACAATCTGCAATATGATTGTGACCCGAGTAAGTCATCGAGGACGATGACTAAGTTAAGTGGGGGAGAATGTCACAACCATACTATGAAGAGAGTAGGTTGTGACTCTCACGCCATGACAAGCAAAGTGGCGTCCCTCAAGAGACGCCCATCTGGCCATATGCGGGTCAAGAAAGAAGAGTGTCATGATGTGATCGAGGAGGACGATGCATCATCCAACACACCACCACGCAAAGTGGGCATTGAAGACATGTTGAGACACAAGCAAGACAGAGACATCAGAATAGACATGAAGGGCAAAGATAGGCTTGTTGAAGGGCCGAGTAGGGCCCCGACCCTTAACCTCAAATGTCGGGGTTTAGGAAGGAATTTGGGCATCGGTTTGGGAGTTAAGTCCGTCCATATGAAATATGAATGCTCGCCAAGTTTGGTGTCAATCAGACATCAGACGGACAATGCCTACACCTGGTAGAATGGAAATGGCTCAAGATGTACAATAGGGGTACCATGGTGTCAGCTCTCCACCACCTCTAGGCCCTGTGGCCTAAGTGAGCTACCCTGTGGCACATACGTGTGTCACAGTGTGGGCGACTTCCTTTGAAATGGGTTTTTTCAGGACAGTACCGAACGGCACGGGTGTGCCAATATTGCGCCCTAGCCCGCGTGTTGGAGGTTGCTACATACACCCGCTATCCGGTACGGTATCTGTAAATGACTCGACATGGGCACAGGAGGGCCTATGCCTCGATAGAACCCGGATGGATGGATGTTTGGGAAGTCCCGATGAGATGAACGACACAAAGGCCCATTCTCGATGGCATGACCGGATGAGTTATGATGGCTGACGACATCCCGAGACTCGGGATGGCGTCAAGACATATAGACCCTATTGATGGGGATCGAGATGACAAGATAAGATGCGATGTTGTATTGAGAGATCTTGGCCCAGTGGTTAAGCAGTATTCCCAACTTGGATCTGAAGAACTTTCATGTACAACACTTGCTTTAGATTCTTGCATTTTGACTTGGCAATTTGGCTTAATATGGCCTGACTTTCCGCAACGATCATACACCACTTTCGCCTGACAATCTCGTTTAAAGTGGTCTGGTTTTTCCCACCTGTAACAAGCTTTAAATGACTTCTTTGACGACTCCTCACTTCTGAATTGATTCCCATTGCTAGATGAAGGCTTTGAATGAAAATTTTGTCTCCTTTGATCTTTGACATACAATACATTTTCTGACTTTCGGGAAAACTCGTTGCTGCTGGTCATTTGCTTAATCAAGGCTTCCTGATTGGAAAGAAGATTCTCCAGTTCAATTACTGTAGGTTGATTTGCCCACCCTTGTATTGAGGAAACAAAGGGCATAAACTCTTTCCGTAATCCACGAGTAAGATAATGTCGTAATTGAGCCTCACTCACTGGTTCCTCAGCATCTAATTCTAAAATTTCAGAGCACAGATTTTTCACTTTCAAAAAATATTCTTCAACAGAAAAATTACCTTGAGTTACCACAGCCAATTCATTCTCTAGAAATTGCAATCGAGCTGTATTTTTCTTGGTGAACAACTTTTGAAGGGTTTCCCATACCTGCTTTGGTGACTTTAAATCACGAACATGATCAATATATTCCTTGCTAATAAGAGTTCGCAAGGTGAATAAGGCTTTTCCACACTTGATTTTCCATTTTCGACATAATTCAGCATTTTGTGGAGTGTCGGCTGGAATTTCTGTGTCATCACTTTCGATTAAATCCCACAAATCTTGTCCCTATAGATAACCTTCCATGCATAACTTCCAATAATTATAGTTATTGCCAACCATCTTTTCCATAGCTATACCCATAGAAGCACTTCCACCATTCATCTCGTTGAGTAATAATATCAAACCGTACCAACTTGGCTCTGATACCAACTGTCACAATATCTCACGCTCAAAGGTGTGAATAAATATGAAACTATTATTACTCAAAAAGGGTAATACAGGGACAATTGAAATAATGAACGGTTTACTATGCCTTGTGTTTTACTAAGCGGAGGGCTCCTATTTAAACAAAAATAAATCCGATAAATAGCTCCTACAAAAACTTTACTGAAATAAACTAGTCCTCCTAATAAGGATGAATGGCTTAACAACTTACTAATTCCATCTAAAATAAGTTGCACTAATTTTGACAAGATTGTTGAGGATTATTGGGAGTGAGTCCTACATTGGTTAATTTAGTGGAAGATCATGGTTTATAAGTGAGGAATATTATCTTCATTGGTATGAGGCTATTTGGGAAAGCCCAAAGCAAAGTCATGAGAGCTTACACTCAAAGTGGACAATATCATACTGTGGAGAGTCATGATTACTAACATGGTATCAGAGTCATGCCCTAAACTTAACCATGTCAATCGAATCCTCAAATATCGAACAAAGAATTGTGAGCCTCGAAGGTGTAGTCAAAAAGTGACTAAAGTGTCGAATAAAGGGTGTACTTTGTTCGAGGGCTCCAAAGAAAGGATTCGAGCCTCGATTAAAGGGGAGGCTATTCGAGAACTCCATAACCCTCAGCAGAGGCTTATAGTGTACTTTGTCTGAGGAGGAGGATTGTTGAGGATTATTGGGAGTGAGTTTCACATTGGTTAATTTACTGGAAGATCATGGGTTTATAAGTGAGGAATATTATCTTCATTGGTATGAGGCCATTTGAGAAAGCCCAAAGCAAAGCCATGAGATCTTACACTCAAAGTGGACAATATATTCCATTGTGGAGAGTCATGATTACTGATGGTGTAATTTGTTTTCGGATTGATTATAGATTATGGTTTTAATCCGAAGTTTCATTTAGTTCCCAAATTTTCTGTGGCCAAATTTCGGCTAGGGAAAAGACTGAGAGTTACCTTGTGGAATTTTTCTCCATTTTTTATTTTATTTATTCTTTTCTTCGTATTTACTCTATACATATTGGGTTTGATTTTCTTGTCCTCTGCGCTTTTTATTAAGCATTTTCGAAATGTGTTTGTTTATCTTGTGTCATGTTTTATCTATCTTGAGTGTACATTGATCTTTTTACCGATCGAATCAGTGCTATCTAATTAAAACAGGTGTATTTACTTCTGCTCTGTTGATAACTTTAATTTTGACAGAGGAGAGGAGTAGATATTGTATTGCATAATTTTAAACAACTTCCTATAAGAGAGCCTCTTTGCTTGTATGTATTTGGACAGGCTGCGAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTATCGTCAAGCCCTTACGAGTAAGTACACTTTTTATTCCACCCCTGGGTTTTTATCTCTATCGGAAGTTGGCCAGATTGTCCTCAATATTATTGTTATTGGTGTCAATTGTTTTTGGATGGCTTGATTGAAACTTGATATGTAGAACAAAAGAAATTTGCACCTTATCTTTGAACTATTAGAAGCTTTAATGTAAATGGGGTAAGTTTGGAAACAAGCATTTTGCCAATAAGAACAAAGCTCTGCGTGCACATAGATAAATTCTGCTTCGGTGATATTCAAATAGACATCAAAGATTTTTTTTATTTTTAATGGGCTTGGGGATGTTATCATCCTGAATTTCTATATTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTGTGGAGGATGGTTGGGAGGAAGTGCCACATTGGCTAATTTAGGGAATGATCATAGGTTTATAAGTAAGGAATACATTTCCATTGGCCTGAGGCCTTTTGGGGAAACCCAAAACAAAGCCATGAGAGATTATGCTCAAAGTGAGTCATACTAGTGTGGAGATCCGTGATTCCTAACATCTTTTACATCTTTCCTCATCTTTGAAAGCCAGAATAATGCCTTCTCAGATCTTCAGTAAGTGGTCGATTGAATTTGTTGGTTTTCTAGTCTGTGATATGTATAAGGGTTTTGCAAATATAAACCAAGTTTTATATTCACATATTTTATAATTTTCTTTTCTTTAACAAATAGATATGAAAACTTTTTTGAGTGTCCATGGCCTGGATGATAGCATCCTGCAGTTCCATCCTTTTACCTTTTTGGTCAACCTTGAAAGGCGGAATAATATTGTTATGAGTCCAAGTATGTGATCAAGTTATAGGTCTCTTGTAAGGGGAGGTAGCCAGTGTTTGTGTGGGTTGGATGGAAGAGTAGAATTCTTCTTTCGTCCTACTTTCAAATAGAGAAGCTTAATACCTCTTGAATGTACACAAGACTAGATTGAAAAAAAAAAAAATTGTACTATCTTCATTGATATTTATGATTATAATAAATATCTTCCTAGGTCTTTTGAAAAAAAATTGTTTTTATTTCCCTAGCACGTGGTGTGAGAAGTGATTTATGGACCACAGTTTGGTTAGAGATGCTTTCGGTATAGTTGTGTTGTAATCTGTTGAACACGTACTTTATTAGTTTGGACAAATGTAGTTGTTTATACAAAGTTTTTACTTCTTAATGAGTGAAAGTTTGATGCTTGTAGTTGAAGATGATATGCTCAGTAACAAGTCTTTTTCGTGCGGTGTAGATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACAGTGTTCGCAGAGCAAGCAAAGTGATGACTGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCGCGGAAACGCCTTGGGAGGAAATTGTGAAGGTCAAATATCTATTGCTTTTCACTAAAACAGTTCCTGCCTTGTATATATTATTATGAATAGGTGTTTGACAATCCTTCCTTCCTACGTTTACAGAAATATGACGCTTTGTTTGAAAGGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAAGGTCAGGATGCCCGTAGCTGAGGGATGTGTTGTGTTGTGTTGTGTTTTGCACATTCACCGTTCTTGTATAATTCTTAATTGGTCATGGCCGCCATGAATGATGAAATTGATGTAAAATCTTTTCTTCCATATGTGGGAAAAAAATCATGCTTTGAAATAGTATTTTAGATCTCGATGCCTTGAGAG

mRNA sequence

CAACGATTCGCCCCTACGATTTCCTGCGTGGTTCGCTAAATAACCTTTCTGATTGATTTCGTAGCTCTAGCGGCTTTAACAAATCCGGACCTGTTATCAAGGCCAGCCAATTAATCATGGCTGCGAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTATCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACAGTGTTCGCAGAGCAAGCAAAGTGATGACTGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCGCGGAAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTTGAAAGGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAAGGTCAGGATGCCCGTAGCTGAGGGATGTGTTGTGTTGTGTTGTGTTTTGCACATTCACCGTTCTTGTATAATTCTTAATTGGTCATGGCCGCCATGAATGATGAAATTGATGTAAAATCTTTTCTTCCATATGTGGGAAAAAAATCATGCTTTGAAATAGTATTTTAGATCTCGATGCCTTGAGAG

Coding sequence (CDS)

ATGGCTGCGAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTATCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACAGTGTTCGCAGAGCAAGCAAAGTGATGACTGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCGCGGAAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTTGAAAGGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAAGGTCAGGATGCCCGTAGCTGA

Protein sequence

MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS
Homology
[Close]
BLAST of CmaCh19G000010 vs. ExPASy Swiss-Prot
Match: Q93VV9 (Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-37
Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGVT +T WEEI++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+S+G    S
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of CmaCh19G000010 vs. ExPASy Swiss-Prot
Match: Q93W66 (Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidopsis thaliana OX=3702 GN=PAM16L1 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.8e-31
Identity = 75/108 (69.44%), Postives = 86/108 (79.63%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q   R     + E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQTIKR--GLTIGEAEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVT ++ W+EI+KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of CmaCh19G000010 vs. ExPASy Swiss-Prot
Match: Q6PBL0 (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=7955 GN=pam16 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.4e-12
Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 62
           AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q++   +   MT QEA+Q
Sbjct: 2   AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQ 61

Query: 63  ILGVTAETPWEEIVKKYDALFERN--AQTGSFYLQSKVHRAKERLE 105
           IL ++  TP EEI K Y+ LF+ N  A  GSFY+QSKV RAKERL+
Sbjct: 62  ILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLD 106

[Close]
BLAST of CmaCh19G000010 vs. ExPASy Swiss-Prot
Match: Q9CQV1 (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-10
Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKV--MTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ    +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTAETPWEEIVKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQSKGQDAR 116
           IL V+  +P EE+ K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+ R
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQEDR 117

[Close]
BLAST of CmaCh19G000010 vs. ExPASy Swiss-Prot
Match: Q9Y3D7 (Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX=9606 GN=PAM16 PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-10
Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKV--MTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ    +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTAETPWEEIVKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQSKGQDAR 116
           IL V+  +P EE+ K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+ R
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQEDR 117

[Close]
BLAST of CmaCh19G000010 vs. ExPASy TrEMBL
Match: A0A6J1HVD2 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467019 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.3e-52
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS
Sbjct: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 116

[Close]
BLAST of CmaCh19G000010 vs. ExPASy TrEMBL
Match: A0A6J1HHA5 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464057 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILG+TAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA S
Sbjct: 61  ILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of CmaCh19G000010 vs. ExPASy TrEMBL
Match: A0A6J1EF52 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432719 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGVT ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQSKGQDA S
Sbjct: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of CmaCh19G000010 vs. ExPASy TrEMBL
Match: A0A6J1IG86 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita maxima OX=3661 GN=LOC111472606 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-49
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGV+ ETPWEEIVKKYDALFE+N QTGSFYLQSKVHRAKERLETLYQSKGQDA S
Sbjct: 61  ILGVSPETPWEEIVKKYDALFEKNTQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of CmaCh19G000010 vs. ExPASy TrEMBL
Match: A0A5D3E4Y7 (Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001310 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.1e-49
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QN+VRRASKVMTEQEARQ
Sbjct: 56  MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 115

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGVT ETPWEE+VKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ+KGQDA S
Sbjct: 116 ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 171

[Close]
BLAST of CmaCh19G000010 vs. NCBI nr
Match: XP_022967548.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 214.5 bits (545), Expect = 4.7e-52
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS
Sbjct: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 116

[Close]
BLAST of CmaCh19G000010 vs. NCBI nr
Match: XP_022963881.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata] >KAG6571434.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 211.5 bits (537), Expect = 4.0e-51
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILG+TAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA S
Sbjct: 61  ILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of CmaCh19G000010 vs. NCBI nr
Match: KAG7011201.1 (Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210.7 bits (535), Expect = 6.8e-51
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA S
Sbjct: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of CmaCh19G000010 vs. NCBI nr
Match: XP_022925423.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata])

HSP 1 Score: 207.6 bits (527), Expect = 5.8e-50
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGVT ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQSKGQDA S
Sbjct: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of CmaCh19G000010 vs. NCBI nr
Match: XP_023554055.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.8 bits (525), Expect = 9.8e-50
Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGVTA TPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLE LYQSKGQDA S
Sbjct: 61  ILGVTAGTPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLEPLYQSKGQDAPS 116

[Close]
BLAST of CmaCh19G000010 vs. TAIR 10
Match: AT3G59280.1 (Protein Transporter, Pam16 )

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-38
Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDARS 117
           ILGVT +T WEEI++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+S+G    S
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of CmaCh19G000010 vs. TAIR 10
Match: AT5G61880.1 (Protein Transporter, Pam16 )

HSP 1 Score: 135.2 bits (339), Expect = 3.4e-32
Identity = 75/108 (69.44%), Postives = 86/108 (79.63%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q   R     + E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQTIKR--GLTIGEAEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVT ++ W+EI+KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of CmaCh19G000010 vs. TAIR 10
Match: AT5G61880.2 (Protein Transporter, Pam16 )

HSP 1 Score: 135.2 bits (339), Expect = 3.4e-32
Identity = 75/108 (69.44%), Postives = 86/108 (79.63%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q   R     + E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQTIKR--GLTIGEAEARQ 60

Query: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVT ++ W+EI+KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

The following BLAST results are available for this feature:
BLAST of CmaCh19G000010 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93VV91.5e-3771.55Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidop... [more]
Q93W664.8e-3169.44Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidop... [more]
Q6PBL08.4e-1248.11Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=... [more]
Q9CQV13.5e-1041.88Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX... [more]
Q9Y3D76.0e-1041.88Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX... [more]
BLAST of CmaCh19G000010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HVD22.3e-52100.00mitochondrial import inner membrane translocase subunit PAM16 like 2-like isofor... [more]
A0A6J1HHA51.9e-5198.28mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc... [more]
A0A6J1EF522.8e-5096.55mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc... [more]
A0A6J1IG862.4e-4994.83mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc... [more]
A0A5D3E4Y73.1e-4993.97Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo va... [more]
BLAST of CmaCh19G000010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022967548.14.7e-52100.00mitochondrial import inner membrane translocase subunit PAM16 like 2-like isofor... [more]
XP_022963881.14.0e-5198.28mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur... [more]
KAG7011201.16.8e-5198.28Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [C... [more]
XP_022925423.15.8e-5096.55mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur... [more]
XP_023554055.19.8e-5097.41mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur... [more]
BLAST of CmaCh19G000010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59280.11.1e-3871.55Protein Transporter, Pam16 [more]
AT5G61880.13.4e-3269.44Protein Transporter, Pam16 [more]
AT5G61880.23.4e-3269.44Protein Transporter, Pam16 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03656Pam16coord: 1..115
e-value: 1.6E-21
score: 76.7
NoneNo IPR availablePANTHERPTHR12388:SF6MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT PAM16 LIKE 1coord: 1..110
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 53..111
e-value: 1.5E-21
score: 77.9
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G000010.1CmaCh19G000010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005744 TIM23 mitochondrial import inner membrane translocase complex