CmaCh18G013390 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G013390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	polyadenylate-binding protein-interacting protein 12
Location	Cma_Chr18: 10199527 .. 10203149 (-)
RNA-Seq Expression	CmaCh18G013390
Synteny	CmaCh18G013390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGATGTTGAGACTCAGAAGCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAGTGATCACGATGTACAGAAGAAGGCACAGCTCAAGGAGAGACCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCCCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAGTCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAGTTTATCCCTCCTTCGCTTGGTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGTCAACAACGAAGGGCATATGAATCGAAGGGTATGTGGGGATTTTGGATGATTTGAAAGATGTCGAACTGTTATTTATACTATTACTAAACTTTGAATGCCGTGCACTTAACGCTTTGATTTCTGTACTACAAAAACCCTTAGACTACATGATGGTTTTGTAGGGTCGGGTGTTGGATTTTTTGAACATTCAAGTGTTTTTTTCAGTTTGTAGTGCTGTTAACCTGCTAGAAGTGCAGCTTGATTATGTATTATTTGATTGCACATTTTAGCACCAATAGATTTTAGAGAAATCTATTTTGTGTTGAATGAATCTACTATTGATTTGGTTTCTCTTGTTTGTTTCCTTTATTCTTTTCGCTTAGAAGAAGAATGGTTTTAGCCAAGGGAGACGGAGGATGAATAATAAGATGAATGCGGTGAAGAGGGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATCGATCAGCAGGTAAGAGACCTCCATTTCCAAAACTCCCTTGATTATATGCCTTGCACTTCTCCTTTTTGACCAATCCATTTTTGGATCATGGAATTGCAATGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTGGCTGTGGAGAGGTAGCGGGTTATTCTCTTTCCTTTCATTTGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGCATTTTACTGCTAGCTTAATGTGATGTATGTTCAATAGGTTGTTGACTGTCGTATCTGCGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACGGATGAAGGTACACTCCCAAGCTCAGTATATTAGTTGTATTTCCGACTATATCATATCTAATTTGCTTCATGCTAGCAGAGGGTGCAAGAGCTTCCTTGAGTCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTTAGAGTGCTGCCCTCAAAAACTGCCATAGCACCTGTCAATCCTGACTTTTTACCCAGGGTAATTAACCGTCTTCAATGTCACTCCTTCATTTTTTTTTTATCCATTCTAATTTGTTCCTAGCAATGCTATCAACTCATTTTAATTTATTGTACTTCTTTTCTTGAAACTGATTTTCTTGTGTTTTATTGTTTCTAGTCGGATGATGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTAGGTTTGCAAGTGAAAAACTTTCTGAATGAATTTGAGAACTGTGTTTTTGGAAGAGGAGAGAATGAAAGAACTTAAATATGCTTGATTGTTTTCATGATATGTGATGTCATGTAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTCTGTTCTTCTTCGTTTAACAGATGTCTTATTTCTTCGGAATTTTATTTGATTCTCTTTACAGCGCTTTTATGTTTTCTGGTTGTGGCTTAATCTATGTCATCTGTTAACCTTGTGTAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCTTTTGTTGAGTTTACCATGGTAATCTTGTTCACTTCCGTTGATTTTATTGCTTTTTTATTTATTTATTTTTTTTATTTTTTTTACACTTCTTTCTTCTTTTCCTTTTGTGGGGGTGGGGGTTGGAGATTGAACATTAGAGGAGTGATGAGGATGGACATGGTTTGCCTTTTCAACTATTAGAGGGGTGGTGAGGATGAATTTGGTTTGCTACTTCCTAACCCAGAAGAAACTCACGCCAAAACGGGGACGATGGCATGCAAGACAAACTTGCCTAGTTTGATTGACTTAATTAATGAACGGCCATCAATTCAAATTCTGGATTTTCGAACCGAGAGAGATCAAGAATTCTCACTATTTCTTAGATTCATGGACCCAATTCAATTCAGCGGGATCTTTCCTTCACATTTTTTCGATCAAGAACAATTATCAACAAATCTGATGTGTGTTTCTTGGATTTACCATCCATCAATGCATCTTTGCTTTTATGGGGTACAGAATGCATTTAGAGCACCATTGTCGAACACCCCCCAAAAATGCATTTAGAGTACTGCTTTACTTGTTATATCTATATGTAAACTTAATAATGGATGTGGTTGCCTTGTCAACAAGTCTGTTGTGGCTTGTAGTTATCATTCACCAATACATCGTTGGTTTTGTGGCATATAGAATGGAGAGCACTTGAGTGATGGCTTTAAGATGCTGCATTCACATCTGTCGAGCAATTTCAAATATCTTTGTAATGCATATATCATCTATTAAATTGTCAAAGATTGATTGTTTTTCATTTGAGTGATTATTGTTTTTCATTTGAGTGATTATTGTTTTTCATGTTTGTGAATAACAAAGCATTAGCTGTGCCCTAAAAGACTTTCTAGAGAACATGGGTGTTTACCCATGCAGTTACATGAATGAAGTCGTGTTTGGCTGTAACTTCACCATGACTTTGCGTAACAGTATTGCATTTATTTTTAATTTGCAGGCTGAGAGTGCAATTGCTGCACTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGTTAGTATAGTTTGTTCTTGTTTCCTTTTCTGGTATTGGGTATTTTGAGAAACGTGTTGTGTTTTTGTTTGCAGAAGTAAAACCGTTTTGATTCTTATGGGTTTTGTTTTCAGGGTAAGCCCATCAAAGACCCCAGTTCGCCCTCGCTCTCCTCGTGCCCAGCTGAACTGATGCTCCCTGCTTCTATCCCATGTCGGCCTAGTGCCCAATAGATATATTTATATATATATTGCATATATATATTATGGTTATAGAGATATTTCCAAAGGGGTTGTGGGGTTTGGTGGTGCATGATCCTCTGCAGTGGAGTTGAGTTGGTACCTTTTGGTGTACCTAGAACTAGGTGTTGTTGGTGAATGAGATATGCGTTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

mRNA sequence

ATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGATGTTGAGACTCAGAAGCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAGTGATCACGATGTACAGAAGAAGGCACAGCTCAAGGAGAGACCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCCCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAGTCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAGTTTATCCCTCCTTCGCTTGGTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGTCAACAACGAAGGGCATATGAATCGAAGGAAGAAGAATGGTTTTAGCCAAGGGAGACGGAGGATGAATAATAAGATGAATGCGGTGAAGAGGGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATCGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTGGCTGTGGAGAGGTTGTTGACTGTCGTATCTGCGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACGGATGAAGAGGGTGCAAGAGCTTCCTTGAGTCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTTAGAGTGCTGCCCTCAAAAACTGCCATAGCACCTGTCAATCCTGACTTTTTACCCAGGTCGGATGATGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCTTTTGTTGAGTTTACCATGGCTGAGAGTGCAATTGCTGCACTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTAAGCCCATCAAAGACCCCAGTTCGCCCTCGCTCTCCTCGTGCCCAGCTGAACTGATGCTCCCTGCTTCTATCCCATGTCGGCCTAGTGCCCAATAGATATATTTATATATATATTGCATATATATATTATGGTTATAGAGATATTTCCAAAGGGGTTGTGGGGTTTGGTGGTGCATGATCCTCTGCAGTGGAGTTGAGTTGGTACCTTTTGGTGTACCTAGAACTAGGTGTTGTTGGTGAATGAGATATGCGTTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGCGGTTCCTGAGAATGTTGGACCCAAAATCGGTTCTCCAAGTCAAACTTTGGAAAATACCATGGTTTCCTCCGATTCTAATGACCCCAACGATGTTGAGACTCAGAAGCCCAACAGCGATTCTACGGTCCCCATGAATGGAGAACCCGACTTTCATTCCAACGGCAGTGATCACGATGTACAGAAGAAGGCACAGCTCAAGGAGAGACCAGCTACCGCTGCTTCCTTTTCACTTCCTTCAGCCAATTTCAAGCCTCAAATGCCTCAGATGCCCAACGGGTTTGAAGCTAATGCCCAGACGCTGATGGTGAAGTCTGCTGCCGGGTATGGGATGAATCAGAGGCCTAACGGAGTGATAAATGGAGCGGATGGAGGAGAAAACTTTAAGAGGGACATGAGCGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAGTTTATCCCTCCTTCGCTTGGTAAAAATTTGTCTGGTTACTTCGGCGCTGGTGGGCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGTCAACAACGAAGGGCATATGAATCGAAGGAAGAAGAATGGTTTTAGCCAAGGGAGACGGAGGATGAATAATAAGATGAATGCGGTGAAGAGGGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATCGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTGGCTGTGGAGAGGTTGTTGACTGTCGTATCTGCGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACGGATGAAGAGGGTGCAAGAGCTTCCTTGAGTCTTTCAGGGACAGTTCTTGGTTTCTATCCAGTTAGAGTGCTGCCCTCAAAAACTGCCATAGCACCTGTCAATCCTGACTTTTTACCCAGGTCGGATGATGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCTTTTGTTGAGTTTACCATGGCTGAGAGTGCAATTGCTGCACTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTAAGCCCATCAAAGACCCCAGTTCGCCCTCGCTCTCCTCGTGCCCAGCTGAACTGA

Protein sequence

MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHDVQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN

Homology

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BLAST of CmaCh18G013390 vs. ExPASy Swiss-Prot
Match: Q9LPI5 (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=3702 GN=CID11 PE=2 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 6.8e-109
Identity = 201/284 (70.77%), Postives = 231/284 (81.34%), Query Frame = 0


Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKN-----LSGYF-GAGGLGYTNDF 180
           +G DGGE+FKRDM +L++L SKLNPMAEEF+PPSL K        G+F  AG     N F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      +   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAI 300
            +F  CG+VVDCRICGDPNS+L FAFIEFTDEEGA  +L+LSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 360
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 361 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 399
           RIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of CmaCh18G013390 vs. ExPASy Swiss-Prot
Match: Q9S7N9 (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=3702 GN=CID12 PE=1 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-107
Identity = 201/295 (68.14%), Postives = 237/295 (80.34%), Query Frame = 0


Query: 109 GYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGL 168
           G G++      +  +DGGE+FKRDM +L +LLSKLNPMA+EFIPPSL K +   F  G  
Sbjct: 42  GNGIHDEIGVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFF 101

Query: 169 GYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQV 228
              N F+   N   NE    RRKK+   QG+RRMN + +  +R+E+ RRTVYVSDIDQQV
Sbjct: 102 AVNNGFVAAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQV 161

Query: 229 TEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVL 288
           TEE LA +F G G+VVDCRICGDPNS+L FAFIEFTDE GAR +L+LSGT+LGFYPV+V+
Sbjct: 162 TEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVM 221

Query: 289 PSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLG 348
           PSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKK+TQ ++KLFFES+CGEV RLRLLG
Sbjct: 222 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLG 281

Query: 349 DYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRS-PRAQLN 403
           DYHH TRI FVEF MAESAIAALNCSGV+LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 282 DYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of CmaCh18G013390 vs. ExPASy Swiss-Prot
Match: Q9SG10 (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=3702 GN=CID10 PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 2.3e-104
Identity = 216/404 (53.47%), Postives = 266/404 (65.84%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSND----PNDVETQKPNSDSTVPMNGEPDFHSNG 60
           MAV EN G K+ S  Q L+N   ++ + +    P   + Q P SDS+ P+          
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLT--------- 60

Query: 61  SDHDVQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRP 120
               +    +  +R            N   Q  Q  NGF  N               +R 
Sbjct: 61  ----IDSTPETDDR-----------INETAQKVQTLNGFSGN--------------GERD 120

Query: 121 NGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLL 180
           N   NG         ++ DL D  SKLNPMA+EF+PPSL ++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVL-RNGLGFTNNFAA 180

Query: 181 QANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
                +   H  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAP 300
           F  CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+LS+SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 401
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of CmaCh18G013390 vs. ExPASy Swiss-Prot
Match: Q9LRR6 (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3702 GN=CID9 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 9.5e-87
Identity = 168/274 (61.31%), Postives = 204/274 (74.45%), Query Frame = 0


Query: 132 DMSDLEDLLSKLNPMAEEFIPPSLG-KNLSGYFGAGGLGYTNDFLLQANSVNNEGHM--- 191
           DM  L  +  KLNP+A+EF P     K  +    A      +DF         E  +   
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 192 ---NRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVV 251
              N RK+  +SQGRRR+  +++  +R++  RRTVYVSDIDQ VTEE LA +F+ CG+VV
Sbjct: 109 KDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVV 168

Query: 252 DCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPR 311
           DCRICGDP+S+L FAF+EF D++GA  +LSL GT+LGFYPVRVLPSKTAI PVNP FLPR
Sbjct: 169 DCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPR 228

Query: 312 SDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMA 371
           S+DEREMC+RTIYCTNIDKKV+QA+V+ FFES CGEV RLRLLGD  HSTRIAFVEF +A
Sbjct: 229 SEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALA 288

Query: 372 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 399
           +SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 289 DSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]

BLAST of CmaCh18G013390 vs. ExPASy Swiss-Prot
Match: Q9C8M0 (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3702 GN=CID8 PE=1 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.2e-86
Identity = 166/271 (61.25%), Postives = 208/271 (76.75%), Query Frame = 0


Query: 133 MSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLL---QANSVNNEGHMNR 192
           M  L  +  KLNP A+EF  PS  +N +          ++DF++    +   N +  +NR
Sbjct: 50  MKKLVAMFKKLNPEAKEFF-PSYKRNTN---------QSDDFVIAIKPSGEDNKKVAINR 109

Query: 193 RKKNGFSQGRR-RMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGCGEVVDCRI 252
           R++N ++QGRR R+  + +  +R++  RRTVYVSDIDQ VTEE LA +F+ CG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 253 CGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDE 312
           CGDPNS+L FAF+EF+D++GAR++LSL GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 313 REMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAI 372
           REMCSRTIYCTN+DK  T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF MAESA+
Sbjct: 230 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 289

Query: 373 AALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 400
           AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 290 AALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]

BLAST of CmaCh18G013390 vs. ExPASy TrEMBL
Match: A0A6J1HZR5 (polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467705 PE=4 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 4.1e-226
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of CmaCh18G013390 vs. ExPASy TrEMBL
Match: A0A6J1HTL6 (polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467705 PE=4 SV=1)

HSP 1 Score: 787.3 bits (2032), Expect = 2.9e-224
Identity = 401/402 (99.75%), Postives = 401/402 (99.75%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           VNNEGHMNRR KNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRR-KNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 401

[Close]

BLAST of CmaCh18G013390 vs. ExPASy TrEMBL
Match: A0A6J1G2E6 (polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450047 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.6e-222
Identity = 396/402 (98.51%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNG+DHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQ KAQL+ER ATAASFSLPS NFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL KNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of CmaCh18G013390 vs. ExPASy TrEMBL
Match: A0A6J1G2G9 (polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450047 PE=4 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 1.2e-220
Identity = 395/402 (98.26%), Postives = 397/402 (98.76%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNG+DHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQ KAQL+ER ATAASFSLPS NFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL KNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           VNNEGHMNRR KNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRR-KNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 401

[Close]

BLAST of CmaCh18G013390 vs. ExPASy TrEMBL
Match: A0A6J1JC04 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111483053 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 1.1e-199
Identity = 358/402 (89.05%), Postives = 372/402 (92.54%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAV ENVGPKIGSPSQ+ ENTM+SSDSNDP DVE QKP +DS V +N EPDFH NG D +
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMLSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
            QKKA L+ER A AASF+LPS NFK QM QM NGFE NAQ+LMVKSA GYGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAAASFALPSPNFKSQMGQMQNGFETNAQSLMVKSAGGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDM DLEDLLSKLNPMAEEF+PPSL KN SGYFG   LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           +NNEG+ NRRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASL+LSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of CmaCh18G013390 vs. NCBI nr
Match: XP_022968474.1 (polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita maxima] >XP_022968475.1 polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita maxima] >XP_022968476.1 polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 793.5 bits (2048), Expect = 8.5e-226
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of CmaCh18G013390 vs. NCBI nr
Match: XP_022968477.1 (polyadenylate-binding protein-interacting protein 12-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 787.3 bits (2032), Expect = 6.1e-224
Identity = 401/402 (99.75%), Postives = 401/402 (99.75%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           VNNEGHMNRR KNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRR-KNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 401

[Close]

BLAST of CmaCh18G013390 vs. NCBI nr
Match: KAG6574264.1 (Polyadenylate-binding protein-interacting protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 783.1 bits (2021), Expect = 1.1e-222
Identity = 397/402 (98.76%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNG+DHD
Sbjct: 82  MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 141

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQ KAQL+ER ATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 142 VQMKAQLQERAATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 201

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL KNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 202 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 261

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 262 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 321

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 322 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 381

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 382 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 441

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 442 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 483

[Close]

BLAST of CmaCh18G013390 vs. NCBI nr
Match: XP_023542023.1 (polyadenylate-binding protein-interacting protein 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 781.6 bits (2017), Expect = 3.3e-222
Identity = 397/402 (98.76%), Postives = 399/402 (99.25%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNG+DHD
Sbjct: 233 MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 292

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQ KAQL+ER ATAASFSLPSANFKPQMPQM NGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 293 VQMKAQLQERAATAASFSLPSANFKPQMPQMLNGFEANAQTLMVKSAAGYGMNQRPNGVI 352

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 353 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 412

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 413 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 472

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 473 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 532

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 533 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 592

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 593 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 634

[Close]

BLAST of CmaCh18G013390 vs. NCBI nr
Match: XP_022945958.1 (polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita moschata] >XP_022945959.1 polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 781.6 bits (2017), Expect = 3.3e-222
Identity = 396/402 (98.51%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGSDHD 60
           MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNG+DHD
Sbjct: 1   MAVPENVGPKIGSPSQTLENTMVSSDSNDPNDVETQKPNSDSTVPMNGEPDFHSNGNDHD 60

Query: 61  VQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120
           VQ KAQL+ER ATAASFSLPS NFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI
Sbjct: 61  VQMKAQLQERAATAASFSLPSVNFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLLQANS 180
           NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSL KNLSGYFGAGGLGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLAKNLSGYFGAGGLGYTNDFLLQANS 180

Query: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240
           VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC
Sbjct: 181 VNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAGC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of CmaCh18G013390 vs. TAIR 10
Match: AT1G32790.1 (CTC-interacting domain 11 )

HSP 1 Score: 395.6 bits (1015), Expect = 4.8e-110
Identity = 201/284 (70.77%), Postives = 231/284 (81.34%), Query Frame = 0


Query: 121 NGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKN-----LSGYF-GAGGLGYTNDF 180
           +G DGGE+FKRDM +L++L SKLNPMAEEF+PPSL K        G+F  AG     N F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      +   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAI 300
            +F  CG+VVDCRICGDPNS+L FAFIEFTDEEGA  +L+LSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 360
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 361 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 399
           RIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of CmaCh18G013390 vs. TAIR 10
Match: AT4G10610.1 (CTC-interacting domain 12 )

HSP 1 Score: 391.3 bits (1004), Expect = 9.1e-109
Identity = 201/295 (68.14%), Postives = 237/295 (80.34%), Query Frame = 0


Query: 109 GYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGL 168
           G G++      +  +DGGE+FKRDM +L +LLSKLNPMA+EFIPPSL K +   F  G  
Sbjct: 42  GNGIHDEIGVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFF 101

Query: 169 GYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQV 228
              N F+   N   NE    RRKK+   QG+RRMN + +  +R+E+ RRTVYVSDIDQQV
Sbjct: 102 AVNNGFVAAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQV 161

Query: 229 TEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVL 288
           TEE LA +F G G+VVDCRICGDPNS+L FAFIEFTDE GAR +L+LSGT+LGFYPV+V+
Sbjct: 162 TEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVM 221

Query: 289 PSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLG 348
           PSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKK+TQ ++KLFFES+CGEV RLRLLG
Sbjct: 222 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLG 281

Query: 349 DYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRS-PRAQLN 403
           DYHH TRI FVEF MAESAIAALNCSGV+LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 282 DYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of CmaCh18G013390 vs. TAIR 10
Match: AT3G49390.1 (CTC-interacting domain 10 )

HSP 1 Score: 380.6 bits (976), Expect = 1.6e-105
Identity = 216/404 (53.47%), Postives = 266/404 (65.84%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSND----PNDVETQKPNSDSTVPMNGEPDFHSNG 60
           MAV EN G K+ S  Q L+N   ++ + +    P   + Q P SDS+ P+          
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLT--------- 60

Query: 61  SDHDVQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRP 120
               +    +  +R            N   Q  Q  NGF  N               +R 
Sbjct: 61  ----IDSTPETDDR-----------INETAQKVQTLNGFSGN--------------GERD 120

Query: 121 NGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLL 180
           N   NG         ++ DL D  SKLNPMA+EF+PPSL ++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVL-RNGLGFTNNFAA 180

Query: 181 QANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
                +   H  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAP 300
           F  CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+LS+SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 401
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of CmaCh18G013390 vs. TAIR 10
Match: AT3G49390.2 (CTC-interacting domain 10 )

HSP 1 Score: 380.6 bits (976), Expect = 1.6e-105
Identity = 216/404 (53.47%), Postives = 266/404 (65.84%), Query Frame = 0


Query: 1   MAVPENVGPKIGSPSQTLENTMVSSDSND----PNDVETQKPNSDSTVPMNGEPDFHSNG 60
           MAV EN G K+ S  Q L+N   ++ + +    P   + Q P SDS+ P+          
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLT--------- 60

Query: 61  SDHDVQKKAQLKERPATAASFSLPSANFKPQMPQMPNGFEANAQTLMVKSAAGYGMNQRP 120
               +    +  +R            N   Q  Q  NGF  N               +R 
Sbjct: 61  ----IDSTPETDDR-----------INETAQKVQTLNGFSGN--------------GERD 120

Query: 121 NGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGLGYTNDFLL 180
           N   NG         ++ DL D  SKLNPMA+EF+PPSL ++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVL-RNGLGFTNNFAA 180

Query: 181 QANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
                +   H  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVLPSKTAIAP 300
           F  CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+LS+SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 360
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 361 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 401
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of CmaCh18G013390 vs. TAIR 10
Match: AT4G10610.2 (CTC-interacting domain 12 )

HSP 1 Score: 370.9 bits (951), Expect = 1.3e-102
Identity = 188/276 (68.12%), Postives = 221/276 (80.07%), Query Frame = 0


Query: 109 GYGMNQRPNGVINGADGGENFKRDMSDLEDLLSKLNPMAEEFIPPSLGKNLSGYFGAGGL 168
           G G++      +  +DGGE+FKRDM +L +LLSKLNPMA+EFIPPSL K +   F  G  
Sbjct: 42  GNGIHDEIGVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFF 101

Query: 169 GYTNDFLLQANSVNNEGHMNRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQV 228
              N F+   N   NE    RRKK+   QG+RRMN + +  +R+E+ RRTVYVSDIDQQV
Sbjct: 102 AVNNGFVAAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQV 161

Query: 229 TEELLATVFAGCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLSLSGTVLGFYPVRVL 288
           TEE LA +F G G+VVDCRICGDPNS+L FAFIEFTDE GAR +L+LSGT+LGFYPV+V+
Sbjct: 162 TEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVM 221

Query: 289 PSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLG 348
           PSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKK+TQ ++KLFFES+CGEV RLRLLG
Sbjct: 222 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLG 281

Query: 349 DYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIR 385
           DYHH TRI FVEF MAESAIAALNCSGV+LGSLPIR
Sbjct: 282 DYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIR 317

The following BLAST results are available for this feature:

BLAST of CmaCh18G013390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPI5	6.8e-109	70.77	Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=...	[more]
Q9S7N9	1.3e-107	68.14	Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=...	[more]
Q9SG10	2.3e-104	53.47	Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=...	[more]
Q9LRR6	9.5e-87	61.31	Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3...	[more]
Q9C8M0	1.2e-86	61.25	Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CmaCh18G013390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZR5	4.1e-226	100.00	polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbit...	[more]
A0A6J1HTL6	2.9e-224	99.75	polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbit...	[more]
A0A6J1G2E6	1.6e-222	98.51	polyadenylate-binding protein-interacting protein 12-like isoform X1 OS=Cucurbit...	[more]
A0A6J1G2G9	1.2e-220	98.26	polyadenylate-binding protein-interacting protein 12-like isoform X2 OS=Cucurbit...	[more]
A0A6J1JC04	1.1e-199	89.05	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661...	[more]

BLAST of CmaCh18G013390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968474.1	8.5e-226	100.00	polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita ...	[more]
XP_022968477.1	6.1e-224	99.75	polyadenylate-binding protein-interacting protein 12-like isoform X2 [Cucurbita ...	[more]
KAG6574264.1	1.1e-222	98.76	Polyadenylate-binding protein-interacting protein 11, partial [Cucurbita argyros...	[more]
XP_023542023.1	3.3e-222	98.76	polyadenylate-binding protein-interacting protein 10-like [Cucurbita pepo subsp....	[more]
XP_022945958.1	3.3e-222	98.51	polyadenylate-binding protein-interacting protein 12-like isoform X1 [Cucurbita ...	[more]

BLAST of CmaCh18G013390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32790.1	4.8e-110	70.77	CTC-interacting domain 11	[more]
AT4G10610.1	9.1e-109	68.14	CTC-interacting domain 12	[more]
AT3G49390.1	1.6e-105	53.47	CTC-interacting domain 10	[more]
AT3G49390.2	1.6e-105	53.47	CTC-interacting domain 10	[more]
AT4G10610.2	1.3e-102	68.12	CTC-interacting domain 12	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 315..386 e-value: 1.9E-11 score: 54.1 coord: 218..288 e-value: 1.1E-12 score: 58.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 219..281 e-value: 1.7E-10 score: 40.6 coord: 316..383 e-value: 6.0E-9 score: 35.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 217..292 score: 12.969665
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 314..390 score: 11.929285
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 300..398 e-value: 3.6E-14 score: 54.9 coord: 177..294 e-value: 1.2E-16 score: 63.0
IPR009818	Ataxin-2, C-terminal	PFAM	PF07145	PAM2	coord: 141..154 e-value: 1.9E-4 score: 20.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..50
None	No IPR available	PANTHER	PTHR32343:SF36	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 12-LIKE	coord: 1..402
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 1..402
IPR034825	CID8-like protein, RNA recognition motif 2	CDD	cd12460	RRM2_CID8_like	coord: 310..391 e-value: 1.03467E-60 score: 189.245
IPR034823	CID8-like protein, RNA recognition motif 1	CDD	cd12459	RRM1_CID8_like	coord: 216..294 e-value: 2.46401E-50 score: 162.205
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 303..396
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 181..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G013390.1	CmaCh18G013390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding