CmaCh18G013230 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh18G013230
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionRNA-binding KH domain-containing protein RCF3-like
LocationCma_Chr18: 10125793 .. 10134765 (-)
RNA-Seq ExpressionCmaCh18G013230
SyntenyCmaCh18G013230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TACAACGGCGGCTTCTCCCTCACCTTCGCGGGTTCTGTTACGTTCGCCTTCGTCGGAACACTCTGAGCTTCATTGGAAGGGATTTGTCCATTATTGTTCGGCTGCAAAGCCACTGTCGGGATTCCTTCTTCCCTGTTTCTACGGTAATTTTACTCTTTCTTCTCCGTGCGCCCTACTTTTTGCATTCTTGCTCGTCTGTTGAGGTTTATAGCTCTTACGTTTTCCATTTCCTTGTACAGACTCTTCGTTAGATCGAAATGGCTTGTATTCAATATGGTAAAAATGCACTCCAGAGAATTATTAAAGACACTAGGCTTCATCCTTCTGATCGAATGATGCAGCCATTGCTGTTCTCGAGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTGACAACAGTGAGTATGTGACTTCACTTTTTTAGTTTTCATGCCTGACCGTTGGGTTTTACGAACAATTAACTGAAAAATTCTTACTTTGATGTTTAAAAAGAGCATAGAAAAGCTTGGGAAGGCCGGTGAGACAGTTAAGGTAGCCCCGGGATACTTTCGAAACCATCTTATGCCCAAGTTGCTGGCTGTTCCAAATATTGACAAGTATGCTTATCTCATCAAGGAGCAGCGCAGGGTACTTCTCTGCAATTTAGATCTTATTAGTTACTTTTGGTTGTTTATCCGTATGCGTTTGTGCTGTTATTTTCTTGATTGCATTGATTAGGCTTACTTTATTGTTCCTTCCCAATTGGAAAGATGGGCTGAGGAGACGACAATTGAATTTACCTGACTGGAAATCGTGCTTTCTTTACTTGTTACATGCTTGTTATGTTCATTTTTTGTGATTTTTAATTTTTAGCAGCCCTCATGAAAACACATTTGAGAGTTACAAAAATGTTAAGTCTTTTATCCCTATTTTGGAAACTTAATGGAGGATTGACCAACTGATTTTGTTACGTGATAGTTTCAGTTTCTAATGTTGACTGCATCGCCATGATAGATTGCACACGAGGATTCAGATACTTTTCATTGGTTTTGATAATTTCAATTTGTTTTAATTTAGATTTACCAACCAGTTGAGGAAGAGGTCGTTAAGGTTGTGACAGTGACGAAGGAGGATAAGATGAAAGAATATGAGAAGGCAGCAAAACGCCTGGATAGTACTCAGCTGGTTTGTAACTTCAATTTTTATGCTTACTTAGTTCTATATATGTTTTGTTCTTCGCCAATTGTCAATTTCTTTTAATCAGTTACCCTTGGAATGATTTATTGTTTGATGTTTAAGAAATGGATAAACTGGTGCACTAAATGGCTTAAGCAAATGTCTGAGGTTGCCCTTTTTAGGAGGCAAGACACAGCGATTGCAATAAAAAAAAGTGGATGAGATTGCCTTCATAGTATTAGATAATTTTTTATAATTTGATATTCTTCCGAATTGATAGATTTATTAATTATAACTGATGCTTAACACAATCTTAGGTGTTGAGGAGGTTAATTGACAAGGAAAAGTTCCGTACTCGTGCCACAAAAGATGAGCCCTTGGCCTTGCAATCTTCTGTGACGGTAGACGACCTTGTTGCTGAGGTAGGCTTTGATCAATTCTTGCGTTCTTCTTCAAATGAGAATTGAACGGATAGGTTATTTATTCCTTGAGAATGAGACTAGTTGAACTTGTCGTTGTGGTTGGCTTTAATTGAATTGATGGCTTTCTTTTGAGCTTCTTCCTCCCCCCTTTTTGGGTATGGTTTTTTTGATTTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGAGGGGCGGTGTGGGTGGGAGAGAGATCCTGAGAGTATCGTAATGTGAAACTTCTTGTCTGCAAATTATAAGCATTTCAGATGGTTCAAGGACTTAGGTTAAACATTTCAGTAAGAGTTCGTGGTCCTAACAACTAACAGAGGATGGACTGAATAGATAAAGATTTGGGATGAGAATCATTTTTAGTCTTTTATCAATGAAGACTTCATTTTTCTTTTCTAATGTAGATCAACATATCCTTTTCTTGGTTTAGGTGGCACGGCAACTTTCTATTCAAATTACGCCTGAAAATCTACATTTGCCAGCCCCCTTACCAACATGTGGTGAATATGAAGTACCACTGCGCTTTCCAAAGTCGATCCCATTGCCTGAAGGAAAGATCTACTGGACCCTGAAAGTTAAAGTCCGTAGTAAATAAAAAATGGGAAACAGCATGCTCGTTCATAATGATGCCAATGGTTTTGGTTTGTTAAGATCGTTAGGCCTCTGGTTATTTTGAGGATTTATTTTTGTGCTTTAATGTTAGCTGTTTGCTGGTTTCTCAAGTGATTGAATTGAATTTCTTTGCAAGACTATACAATGGATTCACATTATGATGAGACAAAAGAATCAAATGCTGAATGGCCATGGCATGAGAAGCTTGTGTTCAAGGAACACTATTTTACCCTTTTCTGTGCATACTTTTGTTTAAGATACGTTATTTTTCTCTTCTTCTCTGTTTGTTCTTATGTTGAATCTCTTGCCCTCGTATTGATAAGCAAAAACTATATTTGGTTATACTTGGTTTTCGAGCTCTACTCCTTGTGTCGTCCATTCACACATTCCTCAGTAGTCTCTAGTACGTCTCACCCATTTCAAGGCCAACTGAATTAACCGTTGTCAGTTCAAAGCTTGAACTTAGGATCTTGGAGGGCTTGAGTTGTTGTGGAATTGAAGTGTTGTAGAGCATCCTTTGTTGGGTATTTGATTAAGATTTTCAAATATTTCAATCATAGTAAGATTAGGTGTGCGAGATTAGTTGAGGCCCCCTAATTTTAGTGTATTTGATTGATGATAAAAACCGTCACTCATCTCTTTTTTATTGGTTGGTCTCGGTAAATAAATATAATCGTTTTGATCATTTCTTATGTTATAATCGTTTTAATGTTCTTTGATTTCTTCTATATGATTATAATTTATGTTTTTTCCATCTTTGGTAAAATCAACTCCACTGTACTCTACCATATATTTATTAGTAGACAATCCAAATTTTTATTTAACAGTACATCCCATCCCAGTCAACCTACCATACTTGAGCTTTTTATTATCTCTTTCAACCACAGTAATATAAATAAAACAATTTAACTTGAAACTAAAACTTACAAAATAATTCATCGATGCTATAAATGCAAATGAGTGTTTGTTCTACTTTCACAAATGGATCAGCAGTGATCTCTACGGAGTTTTCCTGCCCTCGTCTCAGGCGGAAAAAGAGAAGGAATTCGTAGCGGCATTTACAGTGAAGTAGGATGCTTCCGGGGCTTTAAACGAGCGAGAAAGAAAGAAGACTAGGCCAACACATTTAACTATAATTATTTTCTGAATTATTTTTTCAGTAAAAGAAATGTTAAAATGGCAACCATAAATAGCTCCTTTGAAAAGGAAGATGTATTATATTCTTTTGACTTTATATTTCGAAATGCAACGTAATAATGATTTTCATTTAGAATGAAAATTCAAAGTGTTTGAGATAATTAATTAAATGAGTATTTAATGATTAAAAGAATATTATAATAAAAATATAAACAAATGAATTTAACAGAAAAGAATCATGGTTAGAAATCGAAGGTAGTTTTGACTTTGTAGAACGGTTAACATGTGTGTTTATCTTTATCCACTGTGATTAGGAGAGAAAACAAAGGCGCTCAACAAACGGCGTCGTTCGCTTCTTCACTGGCAAGAGAAATCTGATGGATTCGTATTTGCATCACAGCTTCAATTAGTCTTCTTCTTGTACTAGGGTTTTTAATTGCAAAGGTTTTACTGGATTCTCACTGGATACAAGCAGAGGGACGGGATTGAAGCAACGGAATTGAAGCAACGGAGTGAGTTCTGAGTTCTGAGTTCTGAGTTCTGAGTTCTGAGTTTGAGTTTTTATTTTGTTTTTGTTCTTTTTGGACCCGAGGAATCTAACCTACTTATGAGTTAAGAGATTTTGGACCCTTTTACTCCAGAAGATAAGATTGTAACAAAACTGGAAAATCAAAGCCAATGACATCGAATTTCTGTGACTCTAATGGCTTCGCATTGAAATCAACTAAACCGGGGTAACCATTATTTAATATTTGGGATGGAGAAGTCTAGATCTAAGAGAAACTACTATTATGACCACCAAGACTATGATTCCGAGGCGATGGGCAGAACCAGACCTCGTTACAACAATCACTACTCCAGTAATAACTATCGTCACCGTGGCAGTGCAATTCGACCGTCTAAACCTCAAGACCAGCCTCTTATGGTGACCACAACTTACAGGATACTCTGTCATGACGCCAAAGCCGGGGGTGTCATCGGAAAATCTGGTAGTATCATTAAGTCCATAAGGCAGCACACCGGTGCGTGGATCAACGTGCATGAGCTTGTTCCGGGCGATGAGGAGAGAATAATTGAGATATCGGACACTCGGCGACGGGACCCCGAAGGTCGGATGTCGTCGTTCTCTCCCGCGCAGGAAGCACTTTTCTTGATTCATGAAAGGATTCTCGAGAGTGAAATGAGTCCTGGGTTTAATGGAATGGGGTATGGTGCTGAGGATGAGGAGGATGATTACGGCGAGGTTAGAGGAGGAGCTGGTGGTGGCAGTAGCCGTGTGGCCACAAGGCTTGTGGTGTCTAGAATGCACGTAGGTTGTTTGCTAGGGAAGGGAGGAAAGATAATCGAGCAAATGAGAATGGAAACCAAGACTCAGATAAGGGTTCTACCTAGAGATCACAATTTGCCTAGCTGCATTACAATGTCAGAGGAGATCGTTCAGGTTTAGTTTCTGAACACTTCAGTATCTCGAAAGAGTGCCCTATTTCTTGTTGCTATGGTAATCTAAAAACTATTATACTCATACTGAATCAGGTTTAAAGGAAGCCAATTTACTTTTGCAATGCTTAACGGAAGTTGCTAATTGGGTTCTTAGGACATGTTAGAACGTTAAAAGAGGCAGTAATAAAATGGCGTCTATAAGCAGCTTAGTAATGCAGTGACAGGTTTTTTTGAATCTGCTACTATCCTGTCTTTGCTTCACTAGCTATTTGAGAAACTAATAGAGTTCGACAAGAAATCATTTGTTTTCTGAAACCATCAAATTTGTTTCTTACTGCTCATTTTATTCAATCTATGAGTTTACAAAAGCTAGTCATATTGGCAGAAACGTTTATGTGGGGACGTCACATATATCTTGCATATTACATTGTTTTGCCTTTTAATATGTTGATTCAGCGTTGATTGTTGAACTAACTTATTCAACCCCATTTATATTCTTATATATATTGTCCAGAAAGTTTGTTCTTTTCATTTATAGTTTTATTTTCATGCCTAGGCAATGGTCAAACATTTGCCTATGGTTTTAACAAGCCCTTTAAAGGTCTTTTGAAATTGTTAAGTATACAGTAAATATACAAGACATATGTAGTCTTTCATTTTGTTGTATCATTGCTTATATGACCGTGTAGTTGTTTATTATTAGGATGTTGTTTAAATTCTTCTATTCTCCATAGATTGGAGGATCAAAAGCTGTCCAGAAATAAATTATATAATATTAGTGTGATAATCTAATGGACATGCATTGGGATTCCAATTTTTTGTGCCAAGTTATATCCCTCATCCATCTATGATCTAGCTAACCAGGCTTTATATAACTTAAAACACGAGCTCTATCTTGATCCAGAATGAATTAAGGAAAAATATATGGTGACGTGATCAATTGTCTTTCTGTTCGAAGTTCTCACAACTTCATTATTCCATTAGTTGAGTATGAAGAATATATAGTTGTTAATTACTTTCTAATTGGGGCTTTAAACCTCTGCAGATTGTTGGAGATGCAAATGGTGTAAAGAAAGCTACAGCTATCATTTCATCACGCTTGAGAGAGAGCCAGCATCGTGACCGTAGTCATTTCCATGGGCGTCTACATTCACCAGAACGAATGTTCCCTCCTGATGATGATTATGTTCCACATACAGCACGGCGATTATCAATGGATGGACGACCATTTAGGCCACGTATATCTGCTTCTAATACAAGAAGCAATGACTATTTGAACCGTCATTCTAATTTTTCGGTGGAGTATGGGGCTACTCCTGTTAATGACAATATGATGCCCTTTTATGGTGAGGACCTTGTATTTAGAATATTATGCCCAATTGATAAGGTTGATAGTGTCATTGGAGAGTCTGATGGAATCATAGAATTACTTCGGAATGAAGTTGGTGTGGATATCAAGGTTTCAAGCCCTATGACTGGTTCAAACGAACAAATTCTTATCATTTCCTCGGACGAGGTACTTCAACTTTTTTTTTTTTTTTTTTGCCTTAGTGGTATACACCAATTTACTGTTTCCTAGGTCCAAATCACTTAAGATTGCCTTTCCTTGCAGAAGATTTTTAGGAGTTATATAAATAATCACTAAACTGACTTTAAAAGCTACGTTTACCATTTATATATTCATATTTTTCTTGTTTAACTTTCTGATTGGAAAATTTGAGTTCTTAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTTCCTGACAAGGATAACATTGTAACTACTAGGTTACTTGTCCATTCAAGTGATATTGGATGTTTGGAAGGAAGGGATGGATCGTTGTTAGAGATGAAGAGATTAACTGGTGCAAATGTACAAATTGTGCCAAGAGAAGAACTTCCCATGTTTGTATCTGGGGCTGATGAGCTTGTACAGGTTTGTCATTGAACTTTAAATTGATAGAATTCCTAGATTTGATTAAAGTTGTTTAATGTAACTACATTTTGCTCTTCGGGTTTCTTTTTCTTTTTTCTTTTTTTTTTTCCTTTTTTTTTTATTTTAAATTCATAGCTTTTGTAGAATTTTTTTTCCTTAAATCAGTTACAGAACATGGGCATGAACAGTGAAAGTTAGCGGTCTTAAACCATTGTATGAATATTACTTTTATTTATCTTTTTTTTCTCTATTTTTTAAGGATTAAATATGCATATTCTGATTTGAAAATGCAGTTATGAAGTCTCAGGTTAGTAGATAATATTGGTCTTTCCTGATGTATAAATAAGATTTTCTAATTTTTCTACTTTGTTTTATAACTAGTCATTTGGTTTTTTAGCTAGAATTTTGATTAGTAAGAATCTATACTATGGACGGTAAGTTTTGTTTTAAAATATTTTCTAATTTTTCTACTAATGTGTCTAGTAGGAATTGATGACTTTTTCTTCCGGAGTTTCTAATTCCCTAACTGCAATGTTTGTAGATCATAGGGGACATTCAAGCAGCTCGAGATGCACTTGTTGAGTTAACATCAAGATTACGGAGTTATATTTGTAAGGAGCCCTACCAAAAAGATGCAAGTCCCCCGATCTCAGTACCGAGCACCATGGTCAGTTTAGGACTTGAGGAATCATCTTCAAATAATAATGCTGCAGCTCGTGAAGTTCACAGTGGAAATGATTCTTTTAGCACGGCCTATCAAAATGTGCAACCTTTTGTAACAGCACAGCTTCTGAAGGTTACTTATTTTCTAAATCTTTTTTCTTCTCTCATGACGAGAGGATTCTTTCTTTTCAAAACGGTCTCTTATCAGCCATTATGAGTGGAGCCACTTTACTTTCTTTGGATACGAAACTATTTCAGATTAAGGTTCTTCTGAAAACTTCTTCTGCATAAACTTGCTTTCTCTTTCAGACAAGTAGTAAAAGATTCAACCAAGATTTGAAGCCTTCGTGTTAAATCCCTTGAGCCATTGGTCACTCGCAATTTTATAAAATCCAATGTGCCAAATCTTATTTTGGTAGTCATATGATGGTTCCAGTTCCAATCTGTGGGGAAAAAGAAAAAGTCGGGTCATTTTTCTTGCGTGTCTCTAAAGGGAAAAAAAAGTGTTTTTGGCCAACCTAGGTGAACATTTGGTTTCTACTATGGGTCTTCTTGTATGTTTCTTTTGCATTAATATTCAGGAGTATTTATTGCTTTAATAACATACCTGCACTCCATAAATTCTATTTCATTTGAATGCACACCTCTACTGAGACTTTAGTTCTGCACCAAAATGATTCAAACTATCATTTGCAGGAAACTGGAGGGTCGAGCAATGAGACTGGTACGCAGAATGAAAATGACCGACGTGAAGATTTGCCTAGTGGGTTAAATAGGTAGAACTTCTTTCTGCAATGCTGGTTCCTCCCCCTCCCCCAATTCTTTTGAACCAGGGAGACATTTTCTAAGTTACAAATGATTTCATGGTGTTTTCCTGCCTGTCATTTACATGCTTATCTTATATGTTAGATCAATGACTTCACTGCAATATATAAGTTTTGACATTCCGATTAGGATCCCTGTGCCACTTGTCACTCGGAGCACACTTGAAGTTGTGATACCAGAGCCTGCAGTTCCCCAGCTTATAACAAAGTCAAAAAACAAGCTTGCTCAGATCAGTGAGGTGGCAGTAGTTAATTTTCTCAAACCTTTCTGTAGTATATTAAGAAAATGAGTTGTTGGCTGATATTTTGTTTCTAACAGTTATCCGGAGCCAATGTTACGTTGGTAGAAGATAGACCAGATGTAACCCAGAAGATAATTCAAATATCAGGAACACCAGAGCAAGCTGAAAGAGCCCAGAGCTTGCTGCAAGGCTTTATTTTGAGCAGTAAGTCTATCTCACTAACCCATTTTGTGTTACATTGCTAATCTTAGATTACTTTTTTTTCTCTGTATTTATTTATTTGTTCAACACTTTTCAGTGCAAGAAGATGGGCCTTGAGTTATGGGCATTTGGTTTTACTCGAACTTAAGTTGCCTATATAAAAGGATTGACCCATCATGATCAACTGTATTTATCACGGGGCTCTTGCTTCTAGGCTCGGAAGGTGTCTCATTTCCAGCTGAGCGATTGAGCGAATTAACCATTGCCATGTAA

mRNA sequence

TACAACGGCGGCTTCTCCCTCACCTTCGCGGGTTCTGTTACGTTCGCCTTCGTCGGAACACTCTGAGCTTCATTGGAAGGGATTTGTCCATTATTGTTCGGCTGCAAAGCCACTGTCGGGATTCCTTCTTCCCTGTTTCTACGACTCTTCGTTAGATCGAAATGGCTTGTATTCAATATGGTAAAAATGCACTCCAGAGAATTATTAAAGACACTAGGCTTCATCCTTCTGATCGAATGATGCAGCCATTGCTGTTCTCGAGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTGACAACAGTGAAAAAGCTTGGGAAGGCCGGTGAGACAGTTAAGGTAGCCCCGGGATACTTTCGAAACCATCTTATGCCCAAGTTGCTGGCTGTTCCAAATATTGACAAGTATGCTTATCTCATCAAGGAGCAGCGCAGGATTTACCAACCAGTTGAGGAAGAGGTCGTTAAGGTTGTGACAGTGACGAAGGAGGATAAGATGAAAGAATATGAGAAGGCAGCAAAACGCCTGGATAGTACTCAGCTGGTGTTGAGGAGGTTAATTGACAAGGAAAAGTTCCGTACTCGTGCCACAAAAGATGAGCCCTTGGCCTTGCAATCTTCTGTGACGGTAGACGACCTTGTTGCTGAGGTGGCACGGCAACTTTCTATTCAAATTACGCCTGAAAATCTACATTTGCCAGCCCCCTTACCAACATGTGGTGAATATGAAGTACCACTGCGCTTTCCAAAGTCGATCCCATTGCCTGAAGGAAAGATCTACTGGACCCTGAAAGTTAAATCTAGATCTAAGAGAAACTACTATTATGACCACCAAGACTATGATTCCGAGGCGATGGGCAGAACCAGACCTCGTTACAACAATCACTACTCCAGTAATAACTATCGTCACCGTGGCAGTGCAATTCGACCGTCTAAACCTCAAGACCAGCCTCTTATGGTGACCACAACTTACAGGATACTCTGTCATGACGCCAAAGCCGGGGGTGTCATCGGAAAATCTGGTAGTATCATTAAGTCCATAAGGCAGCACACCGGTGCGTGGATCAACGTGCATGAGCTTGTTCCGGGCGATGAGGAGAGAATAATTGAGATATCGGACACTCGGCGACGGGACCCCGAAGGTCGGATGTCGTCGTTCTCTCCCGCGCAGGAAGCACTTTTCTTGATTCATGAAAGGATTCTCGAGAGTGAAATGAGTCCTGGGTTTAATGGAATGGGGTATGGTGCTGAGGATGAGGAGGATGATTACGGCGAGGTTAGAGGAGGAGCTGGTGGTGGCAGTAGCCGTGTGGCCACAAGGCTTGTGGTGTCTAGAATGCACGTAGGTTGTTTGCTAGGGAAGGGAGGAAAGATAATCGAGCAAATGAGAATGGAAACCAAGACTCAGATAAGGGTTCTACCTAGAGATCACAATTTGCCTAGCTGCATTACAATGTCAGAGGAGATCGTTCAGATTGTTGGAGATGCAAATGGTGTAAAGAAAGCTACAGCTATCATTTCATCACGCTTGAGAGAGAGCCAGCATCGTGACCGTAGTCATTTCCATGGGCGTCTACATTCACCAGAACGAATGTTCCCTCCTGATGATGATTATGTTCCACATACAGCACGGCGATTATCAATGGATGGACGACCATTTAGGCCACGTATATCTGCTTCTAATACAAGAAGCAATGACTATTTGAACCGTCATTCTAATTTTTCGGTGGAGTATGGGGCTACTCCTGTTAATGACAATATGATGCCCTTTTATGGTGAGGACCTTGTATTTAGAATATTATGCCCAATTGATAAGGTTGATAGTGTCATTGGAGAGTCTGATGGAATCATAGAATTACTTCGGAATGAAGTTGGTGTGGATATCAAGGTTTCAAGCCCTATGACTGGTTCAAACGAACAAATTCTTATCATTTCCTCGGACGAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTTCCTGACAAGGATAACATTGTAACTACTAGGTTACTTGTCCATTCAAGTGATATTGGATGTTTGGAAGGAAGGGATGGATCGTTGTTAGAGATGAAGAGATTAACTGGTGCAAATGTACAAATTGTGCCAAGAGAAGAACTTCCCATGTTTGTATCTGGGGCTGATGAGCTTGTACAGATCATAGGGGACATTCAAGCAGCTCGAGATGCACTTGTTGAGTTAACATCAAGATTACGGAGTTATATTTGTAAGGAGCCCTACCAAAAAGATGCAAGTCCCCCGATCTCAGTACCGAGCACCATGGTCAGTTTAGGACTTGAGGAATCATCTTCAAATAATAATGCTGCAGCTCGTGAAGTTCACAGTGGAAATGATTCTTTTAGCACGGCCTATCAAAATGTGCAACCTTTTGTAACAGCACAGCTTCTGAAGGAAACTGGAGGGTCGAGCAATGAGACTGGTACGCAGAATGAAAATGACCGACGTGAAGATTTGCCTAGTGGGTTAAATAGGATCCCTGTGCCACTTGTCACTCGGAGCACACTTGAAGTTGTGATACCAGAGCCTGCAGTTCCCCAGCTTATAACAAAGTCAAAAAACAAGCTTGCTCAGATCAGTGAGTTATCCGGAGCCAATGTTACGTTGGTAGAAGATAGACCAGATGTAACCCAGAAGATAATTCAAATATCAGGAACACCAGAGCAAGCTGAAAGAGCCCAGAGCTTGCTGCAAGGCTTTATTTTGAGCAGCTCGGAAGGTGTCTCATTTCCAGCTGAGCGATTGAGCGAATTAACCATTGCCATGTAA

Coding sequence (CDS)

ATGGCTTGTATTCAATATGGTAAAAATGCACTCCAGAGAATTATTAAAGACACTAGGCTTCATCCTTCTGATCGAATGATGCAGCCATTGCTGTTCTCGAGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTGACAACAGTGAAAAAGCTTGGGAAGGCCGGTGAGACAGTTAAGGTAGCCCCGGGATACTTTCGAAACCATCTTATGCCCAAGTTGCTGGCTGTTCCAAATATTGACAAGTATGCTTATCTCATCAAGGAGCAGCGCAGGATTTACCAACCAGTTGAGGAAGAGGTCGTTAAGGTTGTGACAGTGACGAAGGAGGATAAGATGAAAGAATATGAGAAGGCAGCAAAACGCCTGGATAGTACTCAGCTGGTGTTGAGGAGGTTAATTGACAAGGAAAAGTTCCGTACTCGTGCCACAAAAGATGAGCCCTTGGCCTTGCAATCTTCTGTGACGGTAGACGACCTTGTTGCTGAGGTGGCACGGCAACTTTCTATTCAAATTACGCCTGAAAATCTACATTTGCCAGCCCCCTTACCAACATGTGGTGAATATGAAGTACCACTGCGCTTTCCAAAGTCGATCCCATTGCCTGAAGGAAAGATCTACTGGACCCTGAAAGTTAAATCTAGATCTAAGAGAAACTACTATTATGACCACCAAGACTATGATTCCGAGGCGATGGGCAGAACCAGACCTCGTTACAACAATCACTACTCCAGTAATAACTATCGTCACCGTGGCAGTGCAATTCGACCGTCTAAACCTCAAGACCAGCCTCTTATGGTGACCACAACTTACAGGATACTCTGTCATGACGCCAAAGCCGGGGGTGTCATCGGAAAATCTGGTAGTATCATTAAGTCCATAAGGCAGCACACCGGTGCGTGGATCAACGTGCATGAGCTTGTTCCGGGCGATGAGGAGAGAATAATTGAGATATCGGACACTCGGCGACGGGACCCCGAAGGTCGGATGTCGTCGTTCTCTCCCGCGCAGGAAGCACTTTTCTTGATTCATGAAAGGATTCTCGAGAGTGAAATGAGTCCTGGGTTTAATGGAATGGGGTATGGTGCTGAGGATGAGGAGGATGATTACGGCGAGGTTAGAGGAGGAGCTGGTGGTGGCAGTAGCCGTGTGGCCACAAGGCTTGTGGTGTCTAGAATGCACGTAGGTTGTTTGCTAGGGAAGGGAGGAAAGATAATCGAGCAAATGAGAATGGAAACCAAGACTCAGATAAGGGTTCTACCTAGAGATCACAATTTGCCTAGCTGCATTACAATGTCAGAGGAGATCGTTCAGATTGTTGGAGATGCAAATGGTGTAAAGAAAGCTACAGCTATCATTTCATCACGCTTGAGAGAGAGCCAGCATCGTGACCGTAGTCATTTCCATGGGCGTCTACATTCACCAGAACGAATGTTCCCTCCTGATGATGATTATGTTCCACATACAGCACGGCGATTATCAATGGATGGACGACCATTTAGGCCACGTATATCTGCTTCTAATACAAGAAGCAATGACTATTTGAACCGTCATTCTAATTTTTCGGTGGAGTATGGGGCTACTCCTGTTAATGACAATATGATGCCCTTTTATGGTGAGGACCTTGTATTTAGAATATTATGCCCAATTGATAAGGTTGATAGTGTCATTGGAGAGTCTGATGGAATCATAGAATTACTTCGGAATGAAGTTGGTGTGGATATCAAGGTTTCAAGCCCTATGACTGGTTCAAACGAACAAATTCTTATCATTTCCTCGGACGAGGGTCCAGATGATGAGCTTTTTCCAGCACAGGAAGCTTTGTTACACATCCAAACTCGCATTGTTGATCTTGTTCCTGACAAGGATAACATTGTAACTACTAGGTTACTTGTCCATTCAAGTGATATTGGATGTTTGGAAGGAAGGGATGGATCGTTGTTAGAGATGAAGAGATTAACTGGTGCAAATGTACAAATTGTGCCAAGAGAAGAACTTCCCATGTTTGTATCTGGGGCTGATGAGCTTGTACAGATCATAGGGGACATTCAAGCAGCTCGAGATGCACTTGTTGAGTTAACATCAAGATTACGGAGTTATATTTGTAAGGAGCCCTACCAAAAAGATGCAAGTCCCCCGATCTCAGTACCGAGCACCATGGTCAGTTTAGGACTTGAGGAATCATCTTCAAATAATAATGCTGCAGCTCGTGAAGTTCACAGTGGAAATGATTCTTTTAGCACGGCCTATCAAAATGTGCAACCTTTTGTAACAGCACAGCTTCTGAAGGAAACTGGAGGGTCGAGCAATGAGACTGGTACGCAGAATGAAAATGACCGACGTGAAGATTTGCCTAGTGGGTTAAATAGGATCCCTGTGCCACTTGTCACTCGGAGCACACTTGAAGTTGTGATACCAGAGCCTGCAGTTCCCCAGCTTATAACAAAGTCAAAAAACAAGCTTGCTCAGATCAGTGAGTTATCCGGAGCCAATGTTACGTTGGTAGAAGATAGACCAGATGTAACCCAGAAGATAATTCAAATATCAGGAACACCAGAGCAAGCTGAAAGAGCCCAGAGCTTGCTGCAAGGCTTTATTTTGAGCAGCTCGGAAGGTGTCTCATTTCCAGCTGAGCGATTGAGCGAATTAACCATTGCCATGTAA

Protein sequence

MACIQYGKNALQRIIKDTRLHPSDRMMQPLLFSSQGVRHRKLEVILTTVKKLGKAGETVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVEEEVVKVVTVTKEDKMKEYEKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVAEVARQLSIQITPENLHLPAPLPTCGEYEVPLRFPKSIPLPEGKIYWTLKVKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSSFSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAIISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSNDYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVGVDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLVHSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVELTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQNVQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSEGVSFPAERLSELTIAM
Homology
[Close]
BLAST of CmaCh18G013230 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 1.4e-207
Identity = 410/675 (60.74%), Postives = 499/675 (73.93%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY-----SSNNYRHRGSA------IRPSKPQ 272
           +SRSKRNY+YD QDYD ++M R++PRYNN+Y        N R+RG         RPSK  
Sbjct: 3   RSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSKSH 62

Query: 273 DQPLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDT 332
            +  M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHELVPGD ERIIEISD 
Sbjct: 63  PE-TMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDN 122

Query: 333 RRRDPEGRMSSFSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGS 392
           RRRDP+GRM SFSPAQEALF +H+RILESE   G+ G      +EE+DYG VR G G   
Sbjct: 123 RRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVRPGGG--- 182

Query: 393 SRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVG 452
            RV TRLVVSRMHVGCLLGKGGKIIEQMR+ETKT IR+LPR+ NLP C+++SEEIVQIVG
Sbjct: 183 -RVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVG 242

Query: 453 DANGVKKATAIISSRLRESQHRDRSHFHGRLHSPERMF-PPDDDYVPHTARRLSMDGRPF 512
           + N VK A AI+SSRLRESQHRDRS+F GR HSPER F    DDY+P   R+ S      
Sbjct: 243 ELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSS------ 302

Query: 513 RPRISASNTRSNDYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGES 572
             R    N R+N++ +R SN++ E  A PV +N+   Y E+LVF+ILCP DK+  V+GES
Sbjct: 303 -DRFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV---YSEELVFQILCPADKIVRVVGES 362

Query: 573 DGIIELLRNEVGVDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVP 632
            GII+LL+NE+GVD++VS P+ GS+EQI+ ISS+E PDD  FPAQEALLHIQT+I+DL+P
Sbjct: 363 QGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIP 422

Query: 633 DKDNIVTTRLLVHSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQII 692
           DKDN++TTRLLV S D  CLEG+ GS+ E+ RLTG +VQI+ REE+P   S  D ++QI 
Sbjct: 423 DKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRCASINDVVIQIT 482

Query: 693 GDIQAARDALVELTSRLRSYICKEPYQKDASPPISVPSTMVSLG----LEESSSNNNAAA 752
           G+I+AAR+ALVELT  LRS++ KE  QK+ +PP S  +T    G    +E +SSNN   +
Sbjct: 483 GEIRAAREALVELTLLLRSHMFKELSQKE-TPPASTSTTGPLEGVAGVMEVASSNNTIQS 542

Query: 753 REVHSGNDSFSTAYQNVQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLV 812
           RE   G  S +   Q V   +     KE  GS  + G   E++ RE++P   +R+ VPLV
Sbjct: 543 RE---GPTSSNLNLQQVSTILPQ--FKEGFGSVAKAG---ESEHREEVPVTTSRMAVPLV 602

Query: 813 TRSTLEVVIPEPAVPQLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAE 872
           TRSTLEVV+PE  VP+L+TKS+NKLAQISE SGA+VT+VEDRP+ TQ II+ISGTPEQAE
Sbjct: 603 TRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAE 649

[Close]
BLAST of CmaCh18G013230 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-42
Identity = 199/827 (24.06%), Postives = 325/827 (39.30%), Query Frame = 0 

Query: 271 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 330
           +R+LC  +  G VIGKSG++IK ++Q TGA I V E   G  +R+I I    + D + R+
Sbjct: 49  FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITI--IAQADSKSRV 108

Query: 331 SSFSPAQEALFLIHERILESEMSPGFNGMGYGAEDEED-DYGEVRG---------GAGGG 390
                               ++    NG   G + EE+ +  + +G          A   
Sbjct: 109 --------------------KLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD 168

Query: 391 SSRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIV 450
           S  V  RL+    H G ++GKGG+++  +R ET  +I +  R  NLP C    +E+V++ 
Sbjct: 169 SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTDDEMVEVE 228

Query: 451 GDANGVKKATAIISS--------------------------------------------- 510
           G+A  VKKA   IS                                              
Sbjct: 229 GNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEV 288

Query: 511 -----RLRES-------------------------------------------------- 570
                RLR                                                    
Sbjct: 289 NPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMHIEADRQDVLRRHVE 348

Query: 571 --------------------------------QHRDRSHFHGRLHSPERMFPPDDDYVPH 630
                                           QHR+R   H  LH P  M P D   +P 
Sbjct: 349 ADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPF 408

Query: 631 TARRLSMDGRPFRPRISAS-NTRSNDYL-NRHSNFSVEYGATPVNDNM------------ 690
            +      GRP       +   +S DYL +R+S       +   + +M            
Sbjct: 409 ESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTTSASMANTATMKPPPSE 468

Query: 691 MPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVGVDIKVSSPMTGSNEQILIISSD 750
           +    +D+VF+ILC  +    VIG    ++ +L +E G  I V + +    E+++ +++ 
Sbjct: 469 VEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTAS 528

Query: 751 EGPDDELFPAQEALLHIQTRIVDLVPDK--DN----IVTTRLLVHSSDIGCLEGRDGSLL 810
           E P+ +  PAQ+A++ I +R+ +L  +K  DN     +T RL+V +S IGC+ G+ G ++
Sbjct: 529 ENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIV 588

Query: 811 -EMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVELTSRLRSYICKEPYQ 870
            EM++ TGA +QI+  E+ P  +S  D++VQI G+    R+A+  +TSRLR  +     +
Sbjct: 589 SEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMK 648

Query: 871 KDASPPISVPST----------MVSLGLEESSSNNNAAAREVH-SGNDSF-STAYQNV-- 875
              +   S  +T           +S+G  +S SN    +  +H    DSF S ++ +V  
Sbjct: 649 NSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNY 708

[Close]
BLAST of CmaCh18G013230 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 5.6e-39
Identity = 184/671 (27.42%), Postives = 302/671 (45.01%), Query Frame = 0 

Query: 230 EAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYRILCHDAKAGGVIGKSGS 289
           E   R + + NN  S+ N + R   I   K     L+V   YRILC     GGVIGKSG 
Sbjct: 3   ERKKRKQIQRNNSESNRNQKRR---ISHDKINRDELVV---YRILCPIDVVGGVIGKSGK 62

Query: 290 IIKSIRQHTGAWINVHELVPGDEERIIEI--SDTRRRDPEGRMSSFSP----AQEALFLI 349
           +I +IR +T A I V + + G  +R+I I  S   +++  G   S +     AQ+AL  +
Sbjct: 63  VINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKV 122

Query: 350 HERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSRMHVGCLLGKGG 409
           ++ I+ S+              + DD  E              RL+V       L+GK G
Sbjct: 123 YDAIVASDEENNTK-----TNVDRDDNKE-------------CRLLVPFSQSSSLIGKAG 182

Query: 410 KIIEQMRMETKTQIRVLPRDHNLPS--CITMSEEIVQIVGDANGVKKATAIISSRLRESQ 469
           + I+++R  T+  ++V+ +D + PS  C    + +V I G+   VK+A   +S+ + +  
Sbjct: 183 ENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKIN 242

Query: 470 HRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPF---RPRISASNTRSNDYLNRH 529
            R+       L S  +  P     VP            F   +  I         Y N  
Sbjct: 243 PRENI----PLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNAL 302

Query: 530 SNFSVE-YGAT-----PVNDNMMP----FYG----EDLVFRILCPIDKVDSVIGESDGII 589
           S    + Y  T     PV  + +P    F G    E+LVF++LCP+  +  VIG+    I
Sbjct: 303 SVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTI 362

Query: 590 ELLRNEVGVDIKVSSPMT--GSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK 649
           + +R   G  I+V+   T  G +E ++I+++ E PDD    A EA+L +Q  I D   D 
Sbjct: 363 KRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYIND--EDA 422

Query: 650 DNIVTTRLLVHSSDIGCLEGRDGSLL-EMKRLTGANVQIVPREELPMFVSGADELVQIIG 709
           +N V  +LLV S  IGC+ G+ GS++ E+++ T AN+ I   ++        D+LV++ G
Sbjct: 423 EN-VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVSG 482

Query: 710 DIQAARDALVELTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHS 769
           ++ + RDAL+++  RLR  +                     LG ++S +     AR   +
Sbjct: 483 EVSSVRDALIQIVLRLREDV---------------------LGDKDSVATRKPPAR---T 542

Query: 770 GNDSFSTAYQN---VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTR 829
            N SF +   N     P   + +   +G     +    +N      P    R+P    + 
Sbjct: 543 DNCSFLSGSSNAGYTLPSFMSSMASTSGFHGYGSFPAGDNVLGSTGPYSYGRLP----SS 602

Query: 830 STLEVVIPEPAVPQLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERA 870
           S LE++IP  A+ +++ K    L  I  +SGA + +   +      I  +SGT EQ   A
Sbjct: 603 SALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCA 606

[Close]
BLAST of CmaCh18G013230 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-18
Identity = 85/358 (23.74%), Postives = 161/358 (44.97%), Query Frame = 0 

Query: 536 PFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVGVDIKVSSPMTGSNEQILIISSDE 595
           P +  + VFR+L P  KV S+IG    +I+ +  E    IK+     G+ E+ +++S  E
Sbjct: 181 PGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKE 240

Query: 596 GPDDELFPAQEALLHIQTRIVDLVPDK------DNIVTTRLLVHSSDIGCLEGRDGSLLE 655
            P+  L P+ + LL +  RIVD +  +       + V+TRLLV +S  G L G+ G  ++
Sbjct: 241 EPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVK 300

Query: 656 -MKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVELTSRLRSYIC------ 715
            ++  +   V+++  E+LP+F    D +V+++G+  +   AL  + S LR ++       
Sbjct: 301 AIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIP 360

Query: 716 --KEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQNVQPFVTAQ 775
             +   QK       +P    S G  +  + +       H+         ++   +   +
Sbjct: 361 FFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPE 420

Query: 776 LLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQLITKSKNK 835
           + +         G  +   R   +   ++  P  +  + T ++ IP      +I  S + 
Sbjct: 421 MRQPPMEKQPHQGI-SAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSN 480

Query: 836 LAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSEGVSFPAE 879
           ++    LSGA VT+ E R    +  +++SGT  Q + A  L+Q F+  +  G   PA+
Sbjct: 481 ISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM--AEAGAPAPAQ 535

[Close]
BLAST of CmaCh18G013230 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.3e-18
Identity = 91/353 (25.78%), Postives = 162/353 (45.89%), Query Frame = 0 

Query: 536 PFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVGVDIKVSSPMTGSNEQILIISSDE 595
           P +  D VFR++ P+ KV ++IG     I+ +  E    IKV      + ++I++IS  E
Sbjct: 68  PGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKE 127

Query: 596 GPDDELFPAQEALLHIQTRIVDLVPDKDN---------IVTTRLLVHSSDIGCLEGRDGS 655
            P+  + PA +A+L +  R+  L PD D+           + RLLV S+    L G+ GS
Sbjct: 128 EPEAYMSPAMDAVLRVFRRVSGL-PDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGS 187

Query: 656 LLE-MKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVELTSRLRSYICKEP 715
           L++ +   +GA+V+I+  EE P + +  + +V + G+      AL  +   LR ++    
Sbjct: 188 LIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDHT 247

Query: 716 ----YQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQNVQPFVTAQL 775
               ++K     +S   T     L ES S+ +  +  +   + S     + +     +++
Sbjct: 248 VVPLFEKQYLARVS--QTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERDSRV 307

Query: 776 LKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQLITKSKNKL 835
                 S     +Q+        P GL R+    VT+ +  + IP      +I      +
Sbjct: 308 DSRVQPSGVSIYSQDPVLSARHSP-GLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGANI 367

Query: 836 AQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSEGVS 875
           A I   SGA +T +++ P   Q  ++I GT  Q + A+ L+Q FI++  E VS
Sbjct: 368 AYIRRRSGATIT-IKESPHPDQITVEIKGTTSQVQTAEQLIQEFIINHKEPVS 415

[Close]
BLAST of CmaCh18G013230 vs. ExPASy TrEMBL
Match: A0A6J1HSU9 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita maxima OX=3661 GN=LOC111467470 PE=4 SV=1)

HSP 1 Score: 1287.3 bits (3330), Expect = 0.0e+00
Identity = 657/659 (99.70%), Postives = 657/659 (99.70%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 272
           KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR
Sbjct: 3   KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 62

Query: 273 ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 332
           ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS
Sbjct: 63  ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 122

Query: 333 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 392
           FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR
Sbjct: 123 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 182

Query: 393 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 452
           MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI
Sbjct: 183 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 242

Query: 453 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 512
           ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN
Sbjct: 243 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 302

Query: 513 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 572
           DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG
Sbjct: 303 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 362

Query: 573 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 632
           VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV
Sbjct: 363 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 422

Query: 633 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 692
           HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE
Sbjct: 423 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 482

Query: 693 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 752
           LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN
Sbjct: 483 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 542

Query: 753 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 812
           VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ
Sbjct: 543 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 602

Query: 813 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSE 872
           LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS  E
Sbjct: 603 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQE 661

[Close]
BLAST of CmaCh18G013230 vs. ExPASy TrEMBL
Match: A0A6J1G1J7 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662 GN=LOC111449824 PE=4 SV=1)

HSP 1 Score: 1268.1 bits (3280), Expect = 0.0e+00
Identity = 646/659 (98.03%), Postives = 653/659 (99.09%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 272
           KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY+SNNYRHRGSAIRPSKPQDQPLMVTTTYR
Sbjct: 3   KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYASNNYRHRGSAIRPSKPQDQPLMVTTTYR 62

Query: 273 ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 332
           ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS
Sbjct: 63  ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 122

Query: 333 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 392
           FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGG+SRVATRLVVSR
Sbjct: 123 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGNSRVATRLVVSR 182

Query: 393 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 452
           MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKA AI
Sbjct: 183 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKAIAI 242

Query: 453 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 512
           ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN
Sbjct: 243 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 302

Query: 513 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 572
           DYLNRHS+FSVE+GATPVNDNMMPFYGEDLVFRILCPI+KVDSVIGESDGIIELLRNEVG
Sbjct: 303 DYLNRHSSFSVEHGATPVNDNMMPFYGEDLVFRILCPIEKVDSVIGESDGIIELLRNEVG 362

Query: 573 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 632
           VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV
Sbjct: 363 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 422

Query: 633 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 692
           HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE
Sbjct: 423 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 482

Query: 693 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 752
           LTSRLRSYICKEPYQKDASPPIS  +TMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN
Sbjct: 483 LTSRLRSYICKEPYQKDASPPISALNTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 542

Query: 753 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 812
           VQPF TAQLLKETGG+SNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ
Sbjct: 543 VQPFATAQLLKETGGASNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 602

Query: 813 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSE 872
           LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS  E
Sbjct: 603 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQE 661

[Close]
BLAST of CmaCh18G013230 vs. ExPASy TrEMBL
Match: A0A6J1E5R0 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662 GN=LOC111430831 PE=4 SV=1)

HSP 1 Score: 1180.2 bits (3052), Expect = 0.0e+00
Identity = 605/659 (91.81%), Postives = 626/659 (94.99%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 272
           KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY++NNYRHRGSA+RP+KPQDQ LMVTTTYR
Sbjct: 3   KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTTYR 62

Query: 273 ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 332
           ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM S
Sbjct: 63  ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMPS 122

Query: 333 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 392
           FSPAQEALFLIHERILESEMSPGFNGMGYG EDEEDDYG VRGGAGGGSSRVATRLVVSR
Sbjct: 123 FSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGSSRVATRLVVSR 182

Query: 393 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 452
           MHVGCLLGKGGKIIEQMRMETKTQIR+LPRDHNLP CI+MSEEIVQIVG+AN VKKA AI
Sbjct: 183 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKKAVAI 242

Query: 453 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 512
           +SSRLRESQHR+RSHFHGRLHSPER+ PPDDDYVP  ARRLSMDGRPFRPRI  SNTR N
Sbjct: 243 VSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIARRLSMDGRPFRPRI--SNTRGN 302

Query: 513 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 572
           DY NR SNF VE GA  VNDNMMPFYGEDLVFRILCPIDKVDSVIG+SDGIIELLR+EVG
Sbjct: 303 DYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELLRDEVG 362

Query: 573 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 632
           VDIKVS P+TGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV
Sbjct: 363 VDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 422

Query: 633 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 692
            SSDIGCLEGRDGSLLEMKRLTGANV IVPREELPMFVSGADELVQIIGDI+AARDA+VE
Sbjct: 423 PSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARDAVVE 482

Query: 693 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 752
           LTSRLR+Y+ KEP+QKDASPP+S+PSTM SLGLEESSSNNNAAAREVHSGNDS  TAYQN
Sbjct: 483 LTSRLRNYLYKEPFQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSITAYQN 542

Query: 753 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 812
           VQPF T QLLKE GGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE AVP+
Sbjct: 543 VQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEAAVPK 602

Query: 813 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSE 872
           LITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFILS  E
Sbjct: 603 LITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFILSMQE 659

[Close]
BLAST of CmaCh18G013230 vs. ExPASy TrEMBL
Match: A0A5A7U3Y9 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001660 PE=4 SV=1)

HSP 1 Score: 1176.4 bits (3042), Expect = 0.0e+00
Identity = 603/671 (89.87%), Postives = 630/671 (93.89%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRY-NNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTY 272
           KSRSKRNYYYDHQD+DSE+MGRTRPRY NNHY +NNYRHRG+A+RPSKPQDQ LMVTTTY
Sbjct: 3   KSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTTTY 62

Query: 273 RILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMS 332
           RILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 
Sbjct: 63  RILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMP 122

Query: 333 SFSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGG-SSRVATRLVV 392
           SFSPAQEALFLIHERILESEMSPGFNGMGYG EDEEDDYG VRGG G G   RVATRLVV
Sbjct: 123 SFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGSGCGGRVATRLVV 182

Query: 393 SRMHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKAT 452
           SRMHVGCLLGKGGKIIEQMRMETKTQIR+LPRDHNLP CI+MSEEIVQIVGD N VKKA 
Sbjct: 183 SRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKKAI 242

Query: 453 AIISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTR 512
           AI+SSRLRESQHRDRSHFHGRLHSPER+FPPDDDYVPH ARRL MDGRPFRPR+SASN+R
Sbjct: 243 AIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVPHNARRLPMDGRPFRPRMSASNSR 302

Query: 513 SNDYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNE 572
            NDY NR SNF VE GA PVNDNMMPFYGEDLVFRILCPI+K+DSVIGES+GIIELLRN+
Sbjct: 303 GNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGIIELLRND 362

Query: 573 VGVDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRL 632
           VGVDIKVS P+TGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDK+NIVTTRL
Sbjct: 363 VGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTTRL 422

Query: 633 LVHSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDAL 692
           LV SSDIGCLEGRDGSLLEMKRLTGANV IVPRE+LPMFVSGADELVQIIGDI+AARDAL
Sbjct: 423 LVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDAL 482

Query: 693 VELTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAY 752
           VELTSRLR+ + KEP+QKDASP +SV STMVSLGLEESSSNNNAAAREVHSGNDS STA+
Sbjct: 483 VELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSASTAF 542

Query: 753 QNVQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAV 812
           QNVQPF TAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAV
Sbjct: 543 QNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAV 602

Query: 813 PQLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSS 872
           P+LITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS  
Sbjct: 603 PKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSYR 662

Query: 873 EGVSFPAERLS 882
             ++ P   LS
Sbjct: 663 TAMATPISTLS 673

[Close]
BLAST of CmaCh18G013230 vs. ExPASy TrEMBL
Match: A0A6J1J8S6 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita maxima OX=3661 GN=LOC111482777 PE=4 SV=1)

HSP 1 Score: 1176.0 bits (3041), Expect = 0.0e+00
Identity = 602/659 (91.35%), Postives = 626/659 (94.99%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 272
           KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY++NNYRHRGSA+RP+KPQDQ LMVTTTYR
Sbjct: 3   KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTTYR 62

Query: 273 ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 332
           ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM S
Sbjct: 63  ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMPS 122

Query: 333 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 392
           FSPAQEALFLIHERILESEMSPGFNGMGYG EDEEDDYG VRGGAGGGSSRV+TRLVVSR
Sbjct: 123 FSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGAGGGSSRVSTRLVVSR 182

Query: 393 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 452
           MHVGCLLGKGGKIIEQMRMETKTQIR+LPRDHNLP CI+MSEEIVQIVGDAN VKKA AI
Sbjct: 183 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKKAVAI 242

Query: 453 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 512
           +SSRLRESQHR+RSHFHGRLHSPER+ PPDDDYVP  ARRLSMDGRPFRP I  SNTR N
Sbjct: 243 VSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIARRLSMDGRPFRPHI--SNTRGN 302

Query: 513 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 572
           DY NR SNF VE GA  VNDNMMPFYGEDLVFRILCPIDKVDSVIG+SDGIIELLR+EVG
Sbjct: 303 DYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELLRDEVG 362

Query: 573 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 632
           VDIKVS P+TGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKD+IVTTRLLV
Sbjct: 363 VDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDDIVTTRLLV 422

Query: 633 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 692
            SSDIGCLEGRDGSLLEMKRLTGANV IVPREELPMFVSGADELVQIIGDI+AARDA+VE
Sbjct: 423 PSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAARDAVVE 482

Query: 693 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 752
           LTSRLR+Y+ KEP+QKDASPP+S+PS+M SLGLEESSSNNNA+AREVHSGNDS  TAYQN
Sbjct: 483 LTSRLRNYLYKEPFQKDASPPVSLPSSMGSLGLEESSSNNNASAREVHSGNDSSITAYQN 542

Query: 753 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 812
           VQPF TAQLLKE GGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE AVP+
Sbjct: 543 VQPFGTAQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEAAVPK 602

Query: 813 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSE 872
           LITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFILS  E
Sbjct: 603 LITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFILSMQE 659

[Close]
BLAST of CmaCh18G013230 vs. NCBI nr
Match: XP_022968147.1 (RNA-binding KH domain-containing protein RCF3-like [Cucurbita maxima])

HSP 1 Score: 1287.3 bits (3330), Expect = 0.0e+00
Identity = 657/659 (99.70%), Postives = 657/659 (99.70%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 272
           KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR
Sbjct: 3   KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 62

Query: 273 ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 332
           ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS
Sbjct: 63  ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 122

Query: 333 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 392
           FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR
Sbjct: 123 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 182

Query: 393 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 452
           MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI
Sbjct: 183 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 242

Query: 453 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 512
           ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN
Sbjct: 243 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 302

Query: 513 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 572
           DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG
Sbjct: 303 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 362

Query: 573 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 632
           VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV
Sbjct: 363 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 422

Query: 633 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 692
           HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE
Sbjct: 423 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 482

Query: 693 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 752
           LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN
Sbjct: 483 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 542

Query: 753 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 812
           VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ
Sbjct: 543 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 602

Query: 813 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSE 872
           LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS  E
Sbjct: 603 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQE 661

[Close]
BLAST of CmaCh18G013230 vs. NCBI nr
Match: KAG6574246.1 (RNA-binding KH domain-containing protein RCF3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 647/659 (98.18%), Postives = 653/659 (99.09%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 272
           KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY+SNNYRHRGSAIRPSKPQDQPLMVTT YR
Sbjct: 3   KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYASNNYRHRGSAIRPSKPQDQPLMVTTIYR 62

Query: 273 ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 332
           ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS
Sbjct: 63  ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 122

Query: 333 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 392
           FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGG+SRVATRLVVSR
Sbjct: 123 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGNSRVATRLVVSR 182

Query: 393 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 452
           MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKA AI
Sbjct: 183 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKAIAI 242

Query: 453 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 512
           ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN
Sbjct: 243 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 302

Query: 513 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 572
           DYLNRHS+FSVE+GATPVNDNMMPFYGEDLVFRILCPI+KVDSVIGESDGIIELLRNEVG
Sbjct: 303 DYLNRHSSFSVEHGATPVNDNMMPFYGEDLVFRILCPIEKVDSVIGESDGIIELLRNEVG 362

Query: 573 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 632
           VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV
Sbjct: 363 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 422

Query: 633 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 692
           HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE
Sbjct: 423 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 482

Query: 693 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 752
           LTSRLRSYICKEPYQKDASPPIS P+TMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN
Sbjct: 483 LTSRLRSYICKEPYQKDASPPISAPNTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 542

Query: 753 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 812
           VQPF TAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ
Sbjct: 543 VQPFATAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 602

Query: 813 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSE 872
           LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS  E
Sbjct: 603 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQE 661

[Close]
BLAST of CmaCh18G013230 vs. NCBI nr
Match: XP_023541494.1 (RNA-binding KH domain-containing protein RCF3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541495.1 RNA-binding KH domain-containing protein RCF3-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023541496.1 RNA-binding KH domain-containing protein RCF3-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1270.4 bits (3286), Expect = 0.0e+00
Identity = 645/659 (97.88%), Postives = 654/659 (99.24%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 272
           KSRSKRNYYYDHQDYDSE+MGRTRPRYNNHY+SNNYRHRG+AIRPSKPQDQPLMVTTTYR
Sbjct: 3   KSRSKRNYYYDHQDYDSESMGRTRPRYNNHYASNNYRHRGTAIRPSKPQDQPLMVTTTYR 62

Query: 273 ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 332
           ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS
Sbjct: 63  ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 122

Query: 333 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 392
           FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGS+RVATRLVVSR
Sbjct: 123 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSTRVATRLVVSR 182

Query: 393 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 452
           MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKA AI
Sbjct: 183 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKAIAI 242

Query: 453 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 512
           ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN
Sbjct: 243 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 302

Query: 513 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 572
           DYLNRHS+FSVE+GATPVNDNMMPFYGEDLVFRILCPI+KVDSVIGESDGIIELLRNEVG
Sbjct: 303 DYLNRHSSFSVEHGATPVNDNMMPFYGEDLVFRILCPIEKVDSVIGESDGIIELLRNEVG 362

Query: 573 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 632
           VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV
Sbjct: 363 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 422

Query: 633 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 692
           HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE
Sbjct: 423 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 482

Query: 693 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 752
           LTSRLRSYICKEPYQKDASPPIS P+TMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN
Sbjct: 483 LTSRLRSYICKEPYQKDASPPISAPNTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 542

Query: 753 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 812
           VQPF TAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ
Sbjct: 543 VQPFATAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 602

Query: 813 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSE 872
           LITKSKNKLAQISELSGANVTLVEDRPD+TQKIIQISGTPEQAERAQSLLQGFILS  E
Sbjct: 603 LITKSKNKLAQISELSGANVTLVEDRPDITQKIIQISGTPEQAERAQSLLQGFILSMQE 661

[Close]
BLAST of CmaCh18G013230 vs. NCBI nr
Match: KAG7013314.1 (RNA-binding KH domain-containing protein RCF3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1270.0 bits (3285), Expect = 0.0e+00
Identity = 646/659 (98.03%), Postives = 653/659 (99.09%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 272
           KSRSKRNYYYDHQDYDSEA+GRTRPRYNNHY+SNNYRHRGSAIRPSKPQDQPLMVTTTYR
Sbjct: 3   KSRSKRNYYYDHQDYDSEAVGRTRPRYNNHYASNNYRHRGSAIRPSKPQDQPLMVTTTYR 62

Query: 273 ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 332
           ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS
Sbjct: 63  ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 122

Query: 333 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 392
           FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGG+SRVATRLVVSR
Sbjct: 123 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGNSRVATRLVVSR 182

Query: 393 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 452
           MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKA AI
Sbjct: 183 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKAIAI 242

Query: 453 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 512
           ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN
Sbjct: 243 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 302

Query: 513 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 572
           DYLNRHS+FSVE+GATPVNDNMMPFYGEDLVFRILCPI+KVDSVIGESDGIIELLRNEVG
Sbjct: 303 DYLNRHSSFSVEHGATPVNDNMMPFYGEDLVFRILCPIEKVDSVIGESDGIIELLRNEVG 362

Query: 573 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 632
           VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV
Sbjct: 363 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 422

Query: 633 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 692
           HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE
Sbjct: 423 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 482

Query: 693 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 752
           LTSRLRSYICKEPYQKDASPPIS P+TMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN
Sbjct: 483 LTSRLRSYICKEPYQKDASPPISAPNTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 542

Query: 753 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 812
           VQPF TAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ
Sbjct: 543 VQPFATAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 602

Query: 813 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSE 872
           LITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFILS  E
Sbjct: 603 LITKSKNKLAQISELSGANVTLVEDRPDATQKIIQISGTPEQAERAQSLLQGFILSMQE 661

[Close]
BLAST of CmaCh18G013230 vs. NCBI nr
Match: XP_022945650.1 (RNA-binding KH domain-containing protein RCF3-like [Cucurbita moschata])

HSP 1 Score: 1268.1 bits (3280), Expect = 0.0e+00
Identity = 646/659 (98.03%), Postives = 653/659 (99.09%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMVTTTYR 272
           KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY+SNNYRHRGSAIRPSKPQDQPLMVTTTYR
Sbjct: 3   KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYASNNYRHRGSAIRPSKPQDQPLMVTTTYR 62

Query: 273 ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 332
           ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS
Sbjct: 63  ILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRMSS 122

Query: 333 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSR 392
           FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGG+SRVATRLVVSR
Sbjct: 123 FSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGNSRVATRLVVSR 182

Query: 393 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAI 452
           MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKA AI
Sbjct: 183 MHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKAIAI 242

Query: 453 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 512
           ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN
Sbjct: 243 ISSRLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSN 302

Query: 513 DYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVG 572
           DYLNRHS+FSVE+GATPVNDNMMPFYGEDLVFRILCPI+KVDSVIGESDGIIELLRNEVG
Sbjct: 303 DYLNRHSSFSVEHGATPVNDNMMPFYGEDLVFRILCPIEKVDSVIGESDGIIELLRNEVG 362

Query: 573 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 632
           VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV
Sbjct: 363 VDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVTTRLLV 422

Query: 633 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 692
           HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE
Sbjct: 423 HSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 482

Query: 693 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 752
           LTSRLRSYICKEPYQKDASPPIS  +TMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN
Sbjct: 483 LTSRLRSYICKEPYQKDASPPISALNTMVSLGLEESSSNNNAAAREVHSGNDSFSTAYQN 542

Query: 753 VQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 812
           VQPF TAQLLKETGG+SNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ
Sbjct: 543 VQPFATAQLLKETGGASNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPQ 602

Query: 813 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSSE 872
           LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS  E
Sbjct: 603 LITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQE 661

[Close]
BLAST of CmaCh18G013230 vs. TAIR 10
Match: AT5G53060.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 724.5 bits (1869), Expect = 1.0e-208
Identity = 410/675 (60.74%), Postives = 499/675 (73.93%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY-----SSNNYRHRGSA------IRPSKPQ 272
           +SRSKRNY+YD QDYD ++M R++PRYNN+Y        N R+RG         RPSK  
Sbjct: 3   RSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSKSH 62

Query: 273 DQPLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDT 332
            +  M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHELVPGD ERIIEISD 
Sbjct: 63  PE-TMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDN 122

Query: 333 RRRDPEGRMSSFSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGS 392
           RRRDP+GRM SFSPAQEALF +H+RILESE   G+ G      +EE+DYG VR G G   
Sbjct: 123 RRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVRPGGG--- 182

Query: 393 SRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVG 452
            RV TRLVVSRMHVGCLLGKGGKIIEQMR+ETKT IR+LPR+ NLP C+++SEEIVQIVG
Sbjct: 183 -RVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVG 242

Query: 453 DANGVKKATAIISSRLRESQHRDRSHFHGRLHSPERMF-PPDDDYVPHTARRLSMDGRPF 512
           + N VK A AI+SSRLRESQHRDRS+F GR HSPER F    DDY+P   R+ S      
Sbjct: 243 ELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSS------ 302

Query: 513 RPRISASNTRSNDYLNRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGES 572
             R    N R+N++ +R SN++ E  A PV +N+   Y E+LVF+ILCP DK+  V+GES
Sbjct: 303 -DRFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV---YSEELVFQILCPADKIVRVVGES 362

Query: 573 DGIIELLRNEVGVDIKVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVP 632
            GII+LL+NE+GVD++VS P+ GS+EQI+ ISS+E PDD  FPAQEALLHIQT+I+DL+P
Sbjct: 363 QGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIP 422

Query: 633 DKDNIVTTRLLVHSSDIGCLEGRDGSLLEMKRLTGANVQIVPREELPMFVSGADELVQII 692
           DKDN++TTRLLV S D  CLEG+ GS+ E+ RLTG +VQI+ REE+P   S  D ++QI 
Sbjct: 423 DKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRCASINDVVIQIT 482

Query: 693 GDIQAARDALVELTSRLRSYICKEPYQKDASPPISVPSTMVSLG----LEESSSNNNAAA 752
           G+I+AAR+ALVELT  LRS++ KE  QK+ +PP S  +T    G    +E +SSNN   +
Sbjct: 483 GEIRAAREALVELTLLLRSHMFKELSQKE-TPPASTSTTGPLEGVAGVMEVASSNNTIQS 542

Query: 753 REVHSGNDSFSTAYQNVQPFVTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLV 812
           RE   G  S +   Q V   +     KE  GS  + G   E++ RE++P   +R+ VPLV
Sbjct: 543 RE---GPTSSNLNLQQVSTILPQ--FKEGFGSVAKAG---ESEHREEVPVTTSRMAVPLV 602

Query: 813 TRSTLEVVIPEPAVPQLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAE 872
           TRSTLEVV+PE  VP+L+TKS+NKLAQISE SGA+VT+VEDRP+ TQ II+ISGTPEQAE
Sbjct: 603 TRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAE 649

[Close]
BLAST of CmaCh18G013230 vs. TAIR 10
Match: AT5G53070.1 (Ribosomal protein L9/RNase H1 )

HSP 1 Score: 248.1 bits (632), Expect = 2.7e-65
Identity = 132/219 (60.27%), Postives = 172/219 (78.54%), Query Frame = 0 

Query: 1   MACIQYGKNALQRII-KDTRLHPSDRMM-QPLLFSSQGVRHRKLEVILTT-VKKLGKAGE 60
           MA +   +N ++ ++ + T  H  +  +  PLLF+ QGVR+RKLEVILTT ++KLGKAGE
Sbjct: 1   MAYVGQSRNVIRHVVSRGTAYHKYENAIHHPLLFACQGVRYRKLEVILTTGIEKLGKAGE 60

Query: 61  TVKVAPGYFRNHLMPKLLAVPNIDKYAYLIKEQRRIYQPVE-EEVVKVVTVTKEDKMKEY 120
           TVKVAPGYFRNHLMPKLLAVPNIDKYAYLI+EQR++Y   E +E VKVV  T E + KEY
Sbjct: 61  TVKVAPGYFRNHLMPKLLAVPNIDKYAYLIREQRKMYNHEEVKEEVKVVHKTSEVQTKEY 120

Query: 121 EKAAKRLDSTQLVLRRLIDKEKFRTRATKDEPLALQSSVTVDDLVAEVARQLSIQITPEN 180
           EKAAKRL +  LVLR+L+DKEKF+ R++KD+   +Q+ +T +++V+EVARQL ++I P+N
Sbjct: 121 EKAAKRLANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKIDPDN 180

Query: 181 LHLPAPLPTCGEYEVPLRFPKSIPLPEGKIYWTLKVKSR 216
           + L APL T GEYEVPL+FPK+IPLP+G + W LKVK R
Sbjct: 181 VVLAAPLETFGEYEVPLKFPKTIPLPQGTVQWILKVKVR 219

[Close]
BLAST of CmaCh18G013230 vs. TAIR 10
Match: AT5G53060.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 240.0 bits (611), Expect = 7.4e-63
Identity = 133/198 (67.17%), Postives = 149/198 (75.25%), Query Frame = 0 

Query: 213 KSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY-----SSNNYRHRGSA------IRPSKPQ 272
           +SRSKRNY+YD QDYD ++M R++PRYNN+Y        N R+RG         RPSK  
Sbjct: 3   RSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSKSH 62

Query: 273 DQPLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDT 332
            +  M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHELVPGD ERIIEISD 
Sbjct: 63  PE-TMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDN 122

Query: 333 RRRDPEGRMSSFSPAQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGS 392
           RRRDP+GRM SFSPAQEALF +H+RILESE   G+ G      +EE+DYG VR G G   
Sbjct: 123 RRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVRPGGG--- 182

Query: 393 SRVATRLVVSRMHVGCLL 400
            RV TRLVVSRMHVGCLL
Sbjct: 183 -RVVTRLVVSRMHVGCLL 191

[Close]
BLAST of CmaCh18G013230 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 224.9 bits (572), Expect = 2.5e-58
Identity = 168/531 (31.64%), Postives = 268/531 (50.47%), Query Frame = 0 

Query: 223 DHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMV----TTTYRILCHDA 282
           DH+D   +   R+RP+       ++Y   G + R  +  D+  +V     T +R LC   
Sbjct: 10  DHRDSHRK---RSRPQ-------SDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVK 69

Query: 283 KAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEI---SDTRRRDPEGRMSSFSP 342
           K G VIG+ G I+K +R  T + I + E +PG +ER+I I   SD      +G     SP
Sbjct: 70  KIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGE-KVLSP 129

Query: 343 AQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSRMHV 402
           AQ+ALF IH+R++  +           A  E+   GE          +V  +L+V    +
Sbjct: 130 AQDALFRIHDRVVADD-----------ARSEDSPEGE---------KQVTAKLLVPSDQI 189

Query: 403 GCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAIISS 462
           GC+LG+GG+I++ +R ET  QIR++ +D N+P C   S+E++QI G+   VKKA   I+S
Sbjct: 190 GCILGRGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQIAS 249

Query: 463 RLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSNDYL 522
           RL E+  R ++     L S    +P             S+      PR+         Y 
Sbjct: 250 RLHENPSRSQN-----LLSSSGGYPAG-----------SLMSHAGGPRLVGLAPLMGSYG 309

Query: 523 NRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVGVDI 582
               ++S      P ND        +   R++ P++ + SVIG+   +I  LR E    I
Sbjct: 310 RDAGDWSRPLYQPPRNDPP----ATEFFIRLVSPVENIASVIGKGGALINQLRQETRATI 369

Query: 583 KVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIV--TTRLLVH 642
           KV S  T  N+ ++ IS+ E  +D   P  EA++ +Q +  D V     +V  TTRLLV 
Sbjct: 370 KVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVP 429

Query: 643 SSDIGCLEGRDGSLL-EMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 702
           SS IGC+ G+ G+++ EM+R+T AN++I+ +E LP   S  DE+VQI G++  A++AL++
Sbjct: 430 SSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQ 487

Query: 703 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGN 744
           +TSRLR+ +        A  P+ +P   V+    +    ++  +R +  GN
Sbjct: 490 ITSRLRANVFDREGAVSALMPV-LPYVPVAPDAGDRFDYDSRDSRRLERGN 487

[Close]
BLAST of CmaCh18G013230 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 224.9 bits (572), Expect = 2.5e-58
Identity = 168/531 (31.64%), Postives = 268/531 (50.47%), Query Frame = 0 

Query: 223 DHQDYDSEAMGRTRPRYNNHYSSNNYRHRGSAIRPSKPQDQPLMV----TTTYRILCHDA 282
           DH+D   +   R+RP+       ++Y   G + R  +  D+  +V     T +R LC   
Sbjct: 10  DHRDSHRK---RSRPQ-------SDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVK 69

Query: 283 KAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEI---SDTRRRDPEGRMSSFSP 342
           K G VIG+ G I+K +R  T + I + E +PG +ER+I I   SD      +G     SP
Sbjct: 70  KIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGE-KVLSP 129

Query: 343 AQEALFLIHERILESEMSPGFNGMGYGAEDEEDDYGEVRGGAGGGSSRVATRLVVSRMHV 402
           AQ+ALF IH+R++  +           A  E+   GE          +V  +L+V    +
Sbjct: 130 AQDALFRIHDRVVADD-----------ARSEDSPEGE---------KQVTAKLLVPSDQI 189

Query: 403 GCLLGKGGKIIEQMRMETKTQIRVLPRDHNLPSCITMSEEIVQIVGDANGVKKATAIISS 462
           GC+LG+GG+I++ +R ET  QIR++ +D N+P C   S+E++QI G+   VKKA   I+S
Sbjct: 190 GCILGRGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQIAS 249

Query: 463 RLRESQHRDRSHFHGRLHSPERMFPPDDDYVPHTARRLSMDGRPFRPRISASNTRSNDYL 522
           RL E+  R ++     L S    +P             S+      PR+         Y 
Sbjct: 250 RLHENPSRSQN-----LLSSSGGYPAG-----------SLMSHAGGPRLVGLAPLMGSYG 309

Query: 523 NRHSNFSVEYGATPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESDGIIELLRNEVGVDI 582
               ++S      P ND        +   R++ P++ + SVIG+   +I  LR E    I
Sbjct: 310 RDAGDWSRPLYQPPRNDPP----ATEFFIRLVSPVENIASVIGKGGALINQLRQETRATI 369

Query: 583 KVSSPMTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIV--TTRLLVH 642
           KV S  T  N+ ++ IS+ E  +D   P  EA++ +Q +  D V     +V  TTRLLV 
Sbjct: 370 KVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVP 429

Query: 643 SSDIGCLEGRDGSLL-EMKRLTGANVQIVPREELPMFVSGADELVQIIGDIQAARDALVE 702
           SS IGC+ G+ G+++ EM+R+T AN++I+ +E LP   S  DE+VQI G++  A++AL++
Sbjct: 430 SSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQ 487

Query: 703 LTSRLRSYICKEPYQKDASPPISVPSTMVSLGLEESSSNNNAAAREVHSGN 744
           +TSRLR+ +        A  P+ +P   V+    +    ++  +R +  GN
Sbjct: 490 ITSRLRANVFDREGAVSALMPV-LPYVPVAPDAGDRFDYDSRDSRRLERGN 487

The following BLAST results are available for this feature:
BLAST of CmaCh18G013230 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W4B11.4e-20760.74RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN... [more]
F4KDN01.1e-4224.06KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S... [more]
P582235.6e-3927.42KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18... [more]
Q9SR131.1e-1823.74Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV... [more]
Q9SZH49.3e-1825.78RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of CmaCh18G013230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HSU90.0e+0099.70RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1G1J70.0e+0098.03RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1E5R00.0e+0091.81RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662... [more]
A0A5A7U3Y90.0e+0089.87KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A6J1J8S60.0e+0091.35RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita maxima OX=3661 G... [more]
BLAST of CmaCh18G013230 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022968147.10.0e+0099.70RNA-binding KH domain-containing protein RCF3-like [Cucurbita maxima][more]
KAG6574246.10.0e+0098.18RNA-binding KH domain-containing protein RCF3, partial [Cucurbita argyrosperma s... [more]
XP_023541494.10.0e+0097.88RNA-binding KH domain-containing protein RCF3-like isoform X1 [Cucurbita pepo su... [more]
KAG7013314.10.0e+0098.03RNA-binding KH domain-containing protein RCF3 [Cucurbita argyrosperma subsp. arg... [more]
XP_022945650.10.0e+0098.03RNA-binding KH domain-containing protein RCF3-like [Cucurbita moschata][more]
BLAST of CmaCh18G013230 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G53060.11.0e-20860.74RNA-binding KH domain-containing protein [more]
AT5G53070.12.7e-6560.27Ribosomal protein L9/RNase H1 [more]
AT5G53060.27.4e-6367.17RNA-binding KH domain-containing protein [more]
AT5G15270.22.5e-5831.64RNA-binding KH domain-containing protein [more]
AT5G15270.12.5e-5831.64RNA-binding KH domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 540..613
e-value: 0.84
score: 16.2
coord: 267..348
e-value: 5.7E-7
score: 39.2
coord: 624..698
e-value: 0.29
score: 20.2
coord: 797..867
e-value: 0.0059
score: 25.8
coord: 382..458
e-value: 5.7E-7
score: 39.2
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 800..863
e-value: 2.5E-7
score: 30.4
coord: 270..319
e-value: 6.5E-10
score: 38.7
coord: 386..454
e-value: 6.4E-11
score: 41.9
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 797..868
e-value: 1.2E-10
score: 42.9
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 380..462
e-value: 1.0E-15
score: 59.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 267..350
e-value: 1.4E-15
score: 58.8
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 618..706
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 264..321
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 534..594
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 790..868
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 380..464
IPR036935Ribosomal protein L9, N-terminal domain superfamilyGENE3D3.40.5.10coord: 43..91
e-value: 8.1E-11
score: 43.1
IPR020070Ribosomal protein L9, N-terminalPFAMPF01281Ribosomal_L9_Ncoord: 44..78
e-value: 5.0E-11
score: 42.0
NoneNo IPR availableGENE3D3.30.310.210coord: 540..701
e-value: 8.1E-22
score: 79.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..790
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..252
NoneNo IPR availablePANTHERPTHR10288:SF134RNA-BINDING KH DOMAIN-CONTAINING PROTEIN RCF3coord: 213..780
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 213..780
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 268..340
score: 12.495737
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 383..453
score: 14.235682
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 798..862
score: 12.705369
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 541..608
score: 10.001117
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 387..454
e-value: 1.01178E-14
score: 67.5015
NoneNo IPR availableCDDcd00105KH-Icoord: 800..863
e-value: 6.44198E-9
score: 51.0215
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 270..344
e-value: 3.21955E-19
score: 80.2131
IPR036791Ribosomal protein L9, C-terminal domain superfamilySUPERFAMILY55653Ribosomal protein L9 C-domaincoord: 111..199
IPR009027Ribosomal protein L9/RNase H1, N-terminalSUPERFAMILY55658L9 N-domain-likecoord: 44..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G013230.1CmaCh18G013230.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010468 regulation of gene expression
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0003729 mRNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding