CmaCh18G009390 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G009390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	60S acidic ribosomal protein P2-like
Location	Cma_Chr18: 8058488 .. 8059810 (-)
RNA-Seq Expression	CmaCh18G009390
Synteny	CmaCh18G009390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTGCCTCTCAACTTCACAAAAGGATAAACAAACCAGAAACCCTATCTTTCGCCACTATATAAGGTAATAAGAAGCAGTCATCAACATCTACTGAACCCTAACTAAACTCTCTATCTCTCTCTCGTTCTTTTGCGATTTGCTGTCTGCGAAGAATGAAGATCGTAGCTGCATATTTGCTCGCCGTTTTGGGAGGCAACTCCAGCCCTTCTGCTAAAGATTTGAAGAATATTCTTGGATCTGGTAAACATCTGCATCTCGTTCTCATTTTTATCCTTATATTTCTTGAATGTAATCGTTTTTGTGGATTATCCTGGAATTTTTGTGTTGATGTTTAATTTTACGTGTTTTTTTTTTTTTGAATTTTTGAATGAAAAATTTACGTTTTAGTTTGGTTAATATGTTTTGTTCGTTTCATAGAATCTTTTTGTTATTTACTTGCGATTTGATTCTATCTGTTGTGACTCTGCGCGATTTCAAGCTTTGGAGTTCCGTTTTTTGGATGGTTTGCGGTACCGATTGCTGATTATTTTCTCTCATTCTGTAAAATGATCAATTTTATTCTGTCTCGCTGTGATTTTTCTTCTTCCTATATTGATTCTGTTATTTTGGCTTGGTTAGAATTTTAGTTTATGAGGTTACTTCCGTTCCTCAACGCAGCTTTTGATAATTAATTTCTGGTTGAGAAACAATAAGAATAATGTGTTTGTAATTTGTGGCAAGTTTTTCATGTATGAAATTTGCAATCGATGGTTCAAGAGACTGAAGCGGCAGCACGATTGTTTTTTTAATAATTACACATTAAGACTATTTTTTGGTTGGAGCATGATATCCTTAGTGTTGTTATTTGTAATACTCATTTTCATTGCCTTTTGTTTGAATTACGTGAAAGGTAAGTATTTTGATTGATGTCATATTTTTTTTTTTTCCCGAAACCAATTTGCAGTTGGAGCTGAAGTTGATGATGAAAAAATCGAGCTTCTGTTGTCTAGCGTTAAGGGCAAGGATGTTACAGAGCTCATTGCTTCCGGAAGAGAAAAACTAGCATCTGTTCCTTCTGGTGGAGGTGCTGCCATGGCAGTTGCCGCTGGAGGCGGTGGTGGTGGTGGTGGTGCCACCCCAGCTGCAGAAGAGTCAAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGATGATGTAAGCTTCGTTAAACTCTATGATAATGTTGCTTGGAATTGCCATAAGATTCTTGATCATAACCTCAGTTTTATCGCCAAATCTGTTCTAATCTCTTGCTTGATTGGTCTTTTGCAGGATATGGGCTTCAGTCTCTTCGATTAA

mRNA sequence

CAGGTGCCTCTCAACTTCACAAAAGGATAAACAAACCAGAAACCCTATCTTTCGCCACTATATAAGGTAATAAGAAGCAGTCATCAACATCTACTGAACCCTAACTAAACTCTCTATCTCTCTCTCGTTCTTTTGCGATTTGCTGTCTGCGAAGAATGAAGATCGTAGCTGCATATTTGCTCGCCGTTTTGGGAGGCAACTCCAGCCCTTCTGCTAAAGATTTGAAGAATATTCTTGGATCTGTTGGAGCTGAAGTTGATGATGAAAAAATCGAGCTTCTGTTGTCTAGCGTTAAGGGCAAGGATGTTACAGAGCTCATTGCTTCCGGAAGAGAAAAACTAGCATCTGTTCCTTCTGGTGGAGGTGCTGCCATGGCAGTTGCCGCTGGAGGCGGTGGTGGTGGTGGTGGTGCCACCCCAGCTGCAGAAGAGTCAAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGATGATGTAAGCTTCGTTAAACTCTATGATAATGTTGCTTGGAATTGCCATAAGATTCTTGATCATAACCTCAGTTTTATCGCCAAATCTGTTCTAATCTCTTGCTTGATTGGTCTTTTGCAGGATATGGGCTTCAGTCTCTTCGATTAA

Coding sequence (CDS)

ATGAAGATCGTAGCTGCATATTTGCTCGCCGTTTTGGGAGGCAACTCCAGCCCTTCTGCTAAAGATTTGAAGAATATTCTTGGATCTGTTGGAGCTGAAGTTGATGATGAAAAAATCGAGCTTCTGTTGTCTAGCGTTAAGGGCAAGGATGTTACAGAGCTCATTGCTTCCGGAAGAGAAAAACTAGCATCTGTTCCTTCTGGTGGAGGTGCTGCCATGGCAGTTGCCGCTGGAGGCGGTGGTGGTGGTGGTGGTGCCACCCCAGCTGCAGAAGAGTCAAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGATGATGTAAGCTTCGTTAAACTCTATGATAATGTTGCTTGGAATTGCCATAAGATTCTTGATCATAACCTCAGTTTTATCGCCAAATCTGTTCTAATCTCTTGCTTGATTGGTCTTTTGCAGGATATGGGCTTCAGTCTCTTCGATTAA

Protein sequence

MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYDNVAWNCHKILDHNLSFIAKSVLISCLIGLLQDMGFSLFD

Homology

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BLAST of CmaCh18G009390 vs. ExPASy Swiss-Prot
Match: Q9SLF7 (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-30
Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK+VAAYLLAVL G +SP++ D+K ILGSVGAE +D +IELLL  VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGG  +AVA+   GGGGG   +A ESKKEEK EEKEESDD     L++
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

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BLAST of CmaCh18G009390 vs. ExPASy Swiss-Prot
Match: P41099 (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.1e-30
Identity = 80/116 (68.97%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK++AA+LLA+LGGN+SP+ +DLK+IL SVGA+ DD+KIELLLS VKGKD+TELIASGRE
Sbjct: 1   MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYDN 117
           +LASVPSGGG A+A AAGGGGG   A  AAEE KKEEK E  EESD+     L+D+
Sbjct: 61  RLASVPSGGGVAVAAAAGGGGGDAPAA-AAEEPKKEEKSE--EESDEELGFSLFDD 113

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BLAST of CmaCh18G009390 vs. ExPASy Swiss-Prot
Match: P51407 (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 9.1e-30
Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK+VAA+LLAVL G +SP+  D+K+ILGSVGAE +D +IELLL  VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAAMAVA-AGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGG  +AVA A  GGGGGG  PAA ESKKEEK EEKEESDD     L++
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGAPAA-ESKKEEKKEEKEESDDDMGFSLFE 115

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BLAST of CmaCh18G009390 vs. ExPASy Swiss-Prot
Match: O24415 (60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 74/115 (64.35%), Postives = 94/115 (81.74%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK++AAYLLAVLGGN+SP+A D+K+IL SVGAE D+EK+E LL+ +K KD+TE+IA+GRE
Sbjct: 1   MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           +L+SVPSGGG A+ + A     GGGA P AEE+KKEEKVEEKEESD+     L+D
Sbjct: 61  RLSSVPSGGG-AIDMGAPAAVAGGGAAP-AEEAKKEEKVEEKEESDEDMGFSLFD 113

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BLAST of CmaCh18G009390 vs. ExPASy Swiss-Prot
Match: P46252 (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-27
Identity = 78/115 (67.83%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK VAAYLLAVL GN+SPSA DL  IL SVG EVD+EK+ELLLS + GKD+TELIA+GRE
Sbjct: 1   MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           K ASVP GGG     AA      GGA PAA E+KKEEKVEEKEESDD     L+D
Sbjct: 61  KFASVPCGGGGVAVAAA--APAAGGAAPAA-EAKKEEKVEEKEESDDDMGFSLFD 112

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BLAST of CmaCh18G009390 vs. ExPASy TrEMBL
Match: A0A6J1HYE9 (60S acidic ribosomal protein P2-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467757 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44
Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE
Sbjct: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDD     L+D
Sbjct: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDDMGFSLFD 115

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BLAST of CmaCh18G009390 vs. ExPASy TrEMBL
Match: A0A6J1FZV9 (60S acidic ribosomal protein P2-2-like OS=Cucurbita moschata OX=3662 GN=LOC111449424 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 5.2e-44
Identity = 108/115 (93.91%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE
Sbjct: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAAMAVAAGGGGGGGGA PAAEESKKEEKVEEKEESDD     L+D
Sbjct: 61  KLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVEEKEESDDDMGFSLFD 115

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BLAST of CmaCh18G009390 vs. ExPASy TrEMBL
Match: A0A5D3CBJ1 (60S acidic ribosomal protein P2-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002060 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MKIVAAYLLAVLGGN+SPSAKDLK+ILGSVGAE+D+E+IELLLS+VKGKDVTELIASGRE
Sbjct: 1   MKIVAAYLLAVLGGNTSPSAKDLKDILGSVGAEIDEERIELLLSNVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAA+AVAA GGGGGG A PA  E+KKEEKVEEKEESDDVSF++  +
Sbjct: 61  KLASVPSGGGAAVAVAA-GGGGGGAAAPAPAEAKKEEKVEEKEESDDVSFLRFLE 114

[Close]

BLAST of CmaCh18G009390 vs. ExPASy TrEMBL
Match: A0A6J1J1Z8 (60S acidic ribosomal protein P2-4-like OS=Cucurbita maxima OX=3661 GN=LOC111482688 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37
Identity = 97/115 (84.35%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MKIVAAYLLAVLGGN+SPSAKDLK+ILGSVGAEVD++KIELL+SSVKGKD+TELIASGRE
Sbjct: 1   MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAA+AVAA  GGGGG A PAA ESKKEEKVEEKEESDD     L+D
Sbjct: 61  KLASVPSGGGAAVAVAA-SGGGGGAAAPAAAESKKEEKVEEKEESDDDMGFSLFD 114

[Close]

BLAST of CmaCh18G009390 vs. ExPASy TrEMBL
Match: A0A6J1GZ75 (60S acidic ribosomal protein P2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111458566 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37
Identity = 97/115 (84.35%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MKIVAAYLLAVLGGN+SPSAKDLK+ILGSVGAEVD++KIELL+SSVKGKD+TELIASGRE
Sbjct: 1   MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAA+AVAA  GGGGG A PAA ESKKEEKVEEKEESDD     L+D
Sbjct: 61  KLASVPSGGGAAVAVAA-AGGGGGAAAPAAAESKKEEKVEEKEESDDDMGFSLFD 114

[Close]

BLAST of CmaCh18G009390 vs. NCBI nr
Match: XP_022968573.1 (60S acidic ribosomal protein P2-2-like [Cucurbita maxima])

HSP 1 Score: 189.1 bits (479), Expect = 2.8e-44
Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE
Sbjct: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDD     L+D
Sbjct: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CmaCh18G009390 vs. NCBI nr
Match: XP_022945075.1 (60S acidic ribosomal protein P2-2-like [Cucurbita moschata] >KAG6573879.1 60S acidic ribosomal protein P2-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43
Identity = 108/115 (93.91%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE
Sbjct: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAAMAVAAGGGGGGGGA PAAEESKKEEKVEEKEESDD     L+D
Sbjct: 61  KLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CmaCh18G009390 vs. NCBI nr
Match: XP_023541212.1 (60S acidic ribosomal protein P2-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 2.4e-43
Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDE+IELLLSSVKGKDVTELIASGRE
Sbjct: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDERIELLLSSVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAAMAVAAGGGGGGGGA PAAEESKKEEKVEEKEESDD     L+D
Sbjct: 61  KLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CmaCh18G009390 vs. NCBI nr
Match: KAA0034662.1 (60S acidic ribosomal protein P2-4-like [Cucumis melo var. makuwa] >TYK09213.1 60S acidic ribosomal protein P2-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 169.5 bits (428), Expect = 2.3e-38
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MKIVAAYLLAVLGGN+SPSAKDLK+ILGSVGAE+D+E+IELLLS+VKGKDVTELIASGRE
Sbjct: 1   MKIVAAYLLAVLGGNTSPSAKDLKDILGSVGAEIDEERIELLLSNVKGKDVTELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAA+AVAA GGGGGG A PA  E+KKEEKVEEKEESDDVSF++  +
Sbjct: 61  KLASVPSGGGAAVAVAA-GGGGGGAAAPAPAEAKKEEKVEEKEESDDVSFLRFLE 114

[Close]

BLAST of CmaCh18G009390 vs. NCBI nr
Match: XP_042514341.1 (60S acidic ribosomal protein P2-like [Macadamia integrifolia])

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-37
Identity = 93/115 (80.87%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK++AAYLLAVLGGN+SPSA DLKNILGSVGA+ +D+KIELLLS VKGKD+TELIASGRE
Sbjct: 1   MKVIAAYLLAVLGGNTSPSANDLKNILGSVGADAEDDKIELLLSEVKGKDITELIASGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGGAA+AVAA  GGGGGGA PAA+E KKEEKVEEKEESDD     L+D
Sbjct: 61  KLASVPSGGGAAIAVAASAGGGGGGAAPAADEPKKEEKVEEKEESDDDMGFSLFD 115

[Close]

BLAST of CmaCh18G009390 vs. TAIR 10
Match: AT2G27710.1 (60S acidic ribosomal protein family )

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31
Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK+VAAYLLAVL G +SP++ D+K ILGSVGAE +D +IELLL  VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGG  +AVA+   GGGGG   +A ESKKEEK EEKEESDD     L++
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of CmaCh18G009390 vs. TAIR 10
Match: AT2G27710.2 (60S acidic ribosomal protein family )

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31
Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK+VAAYLLAVL G +SP++ D+K ILGSVGAE +D +IELLL  VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGG  +AVA+   GGGGG   +A ESKKEEK EEKEESDD     L++
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of CmaCh18G009390 vs. TAIR 10
Match: AT2G27710.3 (60S acidic ribosomal protein family )

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31
Identity = 77/115 (66.96%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK+VAAYLLAVL G +SP++ D+K ILGSVGAE +D +IELLL  VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAAMAVAAGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGG  +AVA+   GGGGG   +A ESKKEEK EEKEESDD     L++
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115

[Close]

BLAST of CmaCh18G009390 vs. TAIR 10
Match: AT2G27720.1 (60S acidic ribosomal protein family )

HSP 1 Score: 131.3 bits (329), Expect = 6.5e-31
Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGRE 60
           MK+VAA+LLAVL G +SP+  D+K+ILGSVGAE +D +IELLL  VKGKD+ ELIA+GRE
Sbjct: 1   MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60

Query: 61  KLASVPSGGGAAMAVA-AGGGGGGGGATPAAEESKKEEKVEEKEESDDVSFVKLYD 116
           KLASVPSGGG  +AVA A  GGGGGG  PAA ESKKEEK EEKEESDD     L++
Sbjct: 61  KLASVPSGGGGGVAVASATSGGGGGGGAPAA-ESKKEEKKEEKEESDDDMGFSLFE 115

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BLAST of CmaCh18G009390 vs. TAIR 10
Match: AT2G27720.3 (60S acidic ribosomal protein family )

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28
Identity = 80/128 (62.50%), Postives = 93/128 (72.66%), Query Frame = 0


Query: 1   MKIVAAYLLAVLGGNSSPSAKDLKNILGS------------VGAEVDDEKIELLLSSVKG 60
           MK+VAA+LLAVL G +SP+  D+K+ILGS            VGAE +D +IELLL  VKG
Sbjct: 1   MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIVGAETEDSQIELLLKEVKG 60

Query: 61  KDVTELIASGREKLASVPSGGGAAMAVA-AGGGGGGGGATPAAEESKKEEKVEEKEESDD 116
           KD+ ELIA+GREKLASVPSGGG  +AVA A  GGGGGG  PAA ESKKEEK EEKEESDD
Sbjct: 61  KDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAA-ESKKEEKKEEKEESDD 120

The following BLAST results are available for this feature:

BLAST of CmaCh18G009390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLF7	2.4e-30	66.96	60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 ...	[more]
P41099	4.1e-30	68.97	60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1	[more]
P51407	9.1e-30	68.97	60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 ...	[more]
O24415	1.1e-27	64.35	60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1	[more]
P46252	2.5e-27	67.83	60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3	[more]

BLAST of CmaCh18G009390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYE9	1.4e-44	94.78	60S acidic ribosomal protein P2-2-like OS=Cucurbita maxima OX=3661 GN=LOC1114677...	[more]
A0A6J1FZV9	5.2e-44	93.91	60S acidic ribosomal protein P2-2-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A5D3CBJ1	1.1e-38	84.35	60S acidic ribosomal protein P2-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1J1Z8	1.6e-37	84.35	60S acidic ribosomal protein P2-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114826...	[more]
A0A6J1GZ75	1.6e-37	84.35	60S acidic ribosomal protein P2-1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of CmaCh18G009390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968573.1	2.8e-44	94.78	60S acidic ribosomal protein P2-2-like [Cucurbita maxima]	[more]
XP_022945075.1	1.1e-43	93.91	60S acidic ribosomal protein P2-2-like [Cucurbita moschata] >KAG6573879.1 60S ac...	[more]
XP_023541212.1	2.4e-43	93.04	60S acidic ribosomal protein P2-2-like [Cucurbita pepo subsp. pepo]	[more]
KAA0034662.1	2.3e-38	84.35	60S acidic ribosomal protein P2-4-like [Cucumis melo var. makuwa] >TYK09213.1 60...	[more]
XP_042514341.1	1.5e-37	80.87	60S acidic ribosomal protein P2-like [Macadamia integrifolia]	[more]

BLAST of CmaCh18G009390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27710.1	1.7e-31	66.96	60S acidic ribosomal protein family	[more]
AT2G27710.2	1.7e-31	66.96	60S acidic ribosomal protein family	[more]
AT2G27710.3	1.7e-31	66.96	60S acidic ribosomal protein family	[more]
AT2G27720.1	6.5e-31	68.97	60S acidic ribosomal protein family	[more]
AT2G27720.3	3.0e-28	62.50	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 17..107 e-value: 8.4E-18 score: 64.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..104
None	No IPR available	PANTHER	PTHR21141:SF94	60S ACIDIC RIBOSOMAL PROTEIN P2-1	coord: 1..115
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..59 e-value: 5.6E-27 score: 95.7
IPR044076	Ribosomal protein P2	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 1..115
IPR044076	Ribosomal protein P2	CDD	cd05833	Ribosomal_P2	coord: 1..67 e-value: 5.75696E-36 score: 118.52
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 2..115 score: 15.345432

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G009390.1	CmaCh18G009390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002182	cytoplasmic translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome