CmaCh18G009370 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G009370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RAB6-interacting golgin
Location	Cma_Chr18: 8038088 .. 8040533 (-)
RNA-Seq Expression	CmaCh18G009370
Synteny	CmaCh18G009370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGGGAAATGGAAAGAAAGTTTTAAAGCAAAAGCAAAAGGCGAAAAGCTCAGCTCATCTAAAAACATTCAACCATTTGTATAAAGAAGAAGTGTGCTTGCTTGCTTGCTTTTGTAAGAGCTGCAGAAAAGGAAGGCCATTGATGAGGAGACGAAGCTCGTAAGAAACGAAAGAGAGAATGACGAGTAAGCACGGAGACGAAGGAAATGGCGAGCGGATTGTATCGGAAGGAAGTCGTGGTCGAGATGAAGATGGTGAGATGGGGAAGCGACTGACCGTATCGACATTGCAAGCTAGAGAAGAAGAGATTGAGAGGAGGAAGATGGAAGTGAAGGAGAAGGTTGAGTTGCAGTTAAGCCGTGCTGAGGAAGAAGCCAAACGCTTAGCACAAATTTGGGAAGTAAGTTATTTAACCATGCTCTTTATGTAACACACGTAGAAAGGCTCAACCCTTTGGTAGCACAATTCTAATGTAAATTATTATAGATTTAATTTTTAGGGTAAATTACTAAAAATATACCTCATATTTTTATCTCGAAAAATACTAAAAAGTTTAAAGTAATACTTTAAATTAAAAATAGATAAATAAAATACTTTAAAAAATAAAAAGTTCAATATTATGTTTTTTTTTTTTTATTACTAATGGTATCATATTTAAAAAATACTTAATACTCTTAATACTTTAATATNAAATAATTTAAGAGTATTTTTTAAACTTTTTTAAAAGTCGATATTTTTTTAACAAAATGTTAATAATTTCTATCTAAAACTAATCTTAACTTTATTTGAAACTTTTTTAAAGATAAAAAATATTATCGAAGCTTTTGAAAATTTAAAGAGAGTTAATAATAATTTTGCCAATAATTTTTTAATATTAGAAAAAATCATTGAAAAAAATCGATGCTTTTTTTTTTTTTTTTTTAATGCAAATGACCTACATTTTTTTCACTTTGTTTTGGGATAATTCGTTTTTTTTTTTCAAACACAATTCGTAAGAACTAAAATAATCTTTATTTGAACTTTTATTTGCATCAAATTTGATCCAAAATTCAAAAATTCACAAGCACGCAGTGTTATAATTAAAAAAATTAGTTGTCATATTTATAATTGGATTCAAGTTTTGTGCTATCAAATAAAATCTCCAATGTAATTAAACTAGGAAATATACATTTTTTTTTTTTTTAAATTTCATTTACTATAATGTTGTTGTGTATGATAAAGGAGCTGGAGGTAATGGGAGATCCAATGGGGAAAGAGGTTGGTAATGTGAGAAAAAGAATAGACACAGCTAAGAAGGAACTGAAATCACTAGGACAGATCTGCCAAAAGAAGGTGCTCCAATGCCAATAATTTCTTTTTAACATTTAATCTTCCTTTGTATAATCCTTTTTTATTTTTATTTTTTTTTAATTTTTGGCTCTAATTTTATAACGTAAGTTTCAGTTCTAAATGGTAACAGGAAAAAGAATATAAAGAAGTCCTGGAAATATTCAATGAAAAAACCAACGAGAAAGCTCAGCTACTCACTACACTAATGGAGGTAATAATAATTCTTTACCCAACTCTAAATTTTCCGTACCTTTTCTTGGCATGTAAATTTTTTTTTTTTTTAATTCAAAGCATTCTTATTAAATAATAAACTTAAAGTGAATTATTTTAACTCATTTATTCAAAATTTTTATTTTTAATAAAAATAAAACATTCATATATAAAATACCTATTTATTTACTTTTCAAAATAAATTGAAATATATATTTTTTAAATAAAAATAAAACATTCATACATAAGATACCTATTTATTTACTTTTTCAAACTAAATTGCAATATATATTTTAAAAGCTATTGAATAATAAATTATCCAAGAAATATTAATGAAATTAAATAAAATTATAATAAATATATTTGTATCATATGTAAAAAAGTTTTTTTTTCCAAGTTAACAATAAAATTAGGGTTAGTTTGTTTCAATCTAAACTGATTTTAGTGAAACCAACGAACTCAAGTCATAAAAATTTACATTTATTTGAACTAAATCAAACCCAATAAATTATAACTCAATCCAAAACGTACCGATTAGGTTGGGTTGATCACGTTCTTCCCTTTACATCGCACCAAGGGGCTAATATTCTAATAAATTGTCCAATTGCCATTCGCAAATGACCATAATGTTATCAGCTGCTGGATCAAAGTGAGAGATGGAGAATGAACAAGCTTGAAGAATTGAATAAGCACATTGCATTGACGAACTGATCAAGGAGTACACAAACCGAGAAAATATGAATGGCTATCTATATTGTTGTCCATGAGTAGCACCTTTATTTTTTTCTGTTTTTGTTAAAATTGTACTTTTAAAGAAATGTTTTAGACAGTGTTAAAGATAAACATGCAGGCCATCTTCCATTAACATTTAATTAGTATCAATAATATTGTTAATCCTTCTATCA

mRNA sequence

AGAGAGGGAAATGGAAAGAAAGTTTTAAAGCAAAAGCAAAAGGCGAAAAGCTCAGCTCATCTAAAAACATTCAACCATTTGTATAAAGAAGAAGTGTGCTTGCTTGCTTGCTTTTGTAAGAGCTGCAGAAAAGGAAGGCCATTGATGAGGAGACGAAGCTCGTAAGAAACGAAAGAGAGAATGACGAGTAAGCACGGAGACGAAGGAAATGGCGAGCGGATTGTATCGGAAGGAAGTCGTGGTCGAGATGAAGATGGTGAGATGGGGAAGCGACTGACCGTATCGACATTGCAAGCTAGAGAAGAAGAGATTGAGAGGAGGAAGATGGAAGTGAAGGAGAAGGTTGAGTTGCAGTTAAGCCGTGCTGAGGAAGAAGCCAAACGCTTAGCACAAATTTGGGAAGAGCTGGAGGTAATGGGAGATCCAATGGGGAAAGAGGTTGGTAATGTGAGAAAAAGAATAGACACAGCTAAGAAGGAACTGAAATCACTAGGACAGATCTGCCAAAAGAAGGAAAAAGAATATAAAGAAGTCCTGGAAATATTCAATGAAAAAACCAACGAGAAAGCTCAGCTACTCACTACACTAATGGAGCTGCTGGATCAAAGTGAGAGATGGAGAATGAACAAGCTTGAAGAATTGAATAAGCACATTGCATTGACGAACTGATCAAGGAGTACACAAACCGAGAAAATATGAATGGCTATCTATATTGTTGTCCATGAGTAGCACCTTTATTTTTTTCTGTTTTTGTTAAAATTGTACTTTTAAAGAAATGTTTTAGACAGTGTTAAAGATAAACATGCAGGCCATCTTCCATTAACATTTAATTAGTATCAATAATATTGTTAATCCTTCTATCA

Coding sequence (CDS)

ATGACGAGTAAGCACGGAGACGAAGGAAATGGCGAGCGGATTGTATCGGAAGGAAGTCGTGGTCGAGATGAAGATGGTGAGATGGGGAAGCGACTGACCGTATCGACATTGCAAGCTAGAGAAGAAGAGATTGAGAGGAGGAAGATGGAAGTGAAGGAGAAGGTTGAGTTGCAGTTAAGCCGTGCTGAGGAAGAAGCCAAACGCTTAGCACAAATTTGGGAAGAGCTGGAGGTAATGGGAGATCCAATGGGGAAAGAGGTTGGTAATGTGAGAAAAAGAATAGACACAGCTAAGAAGGAACTGAAATCACTAGGACAGATCTGCCAAAAGAAGGAAAAAGAATATAAAGAAGTCCTGGAAATATTCAATGAAAAAACCAACGAGAAAGCTCAGCTACTCACTACACTAATGGAGCTGCTGGATCAAAGTGAGAGATGGAGAATGAACAAGCTTGAAGAATTGAATAAGCACATTGCATTGACGAACTGA

Protein sequence

MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN

Homology

[Close]

BLAST of CmaCh18G009370 vs. ExPASy TrEMBL
Match: A0A6J1HV92 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.5e-78
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 163
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 162

[Close]

BLAST of CmaCh18G009370 vs. ExPASy TrEMBL
Match: A0A6J1G1N1 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.8e-75
Identity = 157/162 (96.91%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKH DEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 163
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEEL+KHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162

[Close]

BLAST of CmaCh18G009370 vs. ExPASy TrEMBL
Match: A0A6J1HTV1 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 8.1e-64
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMEL 140
           IFNEKTNEKAQLLTTLME+
Sbjct: 121 IFNEKTNEKAQLLTTLMEV 139

[Close]

BLAST of CmaCh18G009370 vs. ExPASy TrEMBL
Match: A0A6J1G1M5 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.2e-61
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKH DEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMEL 140
           IFNEKTNEKAQLLTTLME+
Sbjct: 121 IFNEKTNEKAQLLTTLMEV 139

[Close]

BLAST of CmaCh18G009370 vs. ExPASy TrEMBL
Match: A0A1S3BFW5 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103489402 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.7e-59
Identity = 132/162 (81.48%), Postives = 145/162 (89.51%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSK+G  GNG+R++ EGS  R+ED E   +LTVSTLQAREEEIER+KMEVKEKVE QL+
Sbjct: 1   MTSKNGGGGNGDRVLLEGSNDRNED-ETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLT 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT K+ELKSLGQICQKKEKEYKEV +
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQD 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 163
           IFNEK+NEKAQLL TLMELL QSE+WRM KLEELNK+I  TN
Sbjct: 121 IFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN 161

[Close]

BLAST of CmaCh18G009370 vs. NCBI nr
Match: XP_022968566.1 (uncharacterized protein LOC111467754 isoform X1 [Cucurbita maxima])

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 163
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 162

[Close]

BLAST of CmaCh18G009370 vs. NCBI nr
Match: KAG6573875.1 (hypothetical protein SDJN03_27762, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 157/162 (96.91%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 163
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEEL+KHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162

[Close]

BLAST of CmaCh18G009370 vs. NCBI nr
Match: XP_022945697.1 (uncharacterized protein LOC111449848 isoform X1 [Cucurbita moschata])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 157/162 (96.91%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKH DEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 163
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEEL+KHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162

[Close]

BLAST of CmaCh18G009370 vs. NCBI nr
Match: XP_023542304.1 (uncharacterized protein LOC111802239 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.1 bits (736), Expect = 4.7e-74
Identity = 155/162 (95.68%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQ REEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQGREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 163
           IFNEKTNEKAQLL TLMELLDQSERWRMNKLEEL+KH+ALTN
Sbjct: 121 IFNEKTNEKAQLLATLMELLDQSERWRMNKLEELSKHMALTN 162

[Close]

BLAST of CmaCh18G009370 vs. NCBI nr
Match: XP_022968567.1 (uncharacterized protein LOC111467754 isoform X2 [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 1.7e-63
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMEL 140
           IFNEKTNEKAQLLTTLME+
Sbjct: 121 IFNEKTNEKAQLLTTLMEV 139

[Close]

BLAST of CmaCh18G009370 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-34
Identity = 85/144 (59.03%), Postives = 106/144 (73.61%), Query Frame = 0


Query: 15  VSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWE 74
           +S  S+   ED EM  R  +S  +A+EEEIE++KME++E+V+ QL R EEE KRLA I E
Sbjct: 32  MSFSSQMSKEDEEM-SRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIRE 91

Query: 75  ELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLT 134
           ELE + DPM KEV  VRK+ID+  KELK LG   QKKE+EYKE LE FNEK  EK QL+T
Sbjct: 92  ELEGLADPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLIT 151

Query: 135 TLMELLDQSERWRMNKLEELNKHI 159
            LMEL+ +SE+ RM KLEEL+K+I
Sbjct: 152 RLMELVGESEKMRMKKLEELSKNI 174

[Close]

BLAST of CmaCh18G009370 vs. TAIR 10
Match: AT3G52900.1 (Family of unknown function (DUF662) )

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-34
Identity = 82/136 (60.29%), Postives = 102/136 (75.00%), Query Frame = 0


Query: 23  DEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDP 82
           D + E   ++ V+  QAREEEIER+KM VKEKV+ +L  AEE  + L Q  EELE+MGDP
Sbjct: 25  DNEEEEIWKVAVTRFQAREEEIERKKMTVKEKVQQRLGFAEEATRCLTQTLEELEIMGDP 84

Query: 83  MGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQ 142
           M KEVG VRK+ID A +++KSL Q CQKKEKEYK+ LE FNEK  EKA L++ LMELL +
Sbjct: 85  MRKEVGMVRKKIDMANRDIKSLAQSCQKKEKEYKDTLEAFNEKNKEKAHLVSMLMELLAE 144

Query: 143 SERWRMNKLEELNKHI 159
           SER R+ KLEE+NK +
Sbjct: 145 SERLRIKKLEEINKTV 160

[Close]

BLAST of CmaCh18G009370 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 138.3 bits (347), Expect = 5.6e-33
Identity = 82/144 (56.94%), Postives = 105/144 (72.92%), Query Frame = 0


Query: 15  VSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWE 74
           +S  S+   ED EM  R  +S  +A+E+EIE+RKMEV+E+V+ QL R EEE +RLA I E
Sbjct: 18  LSFSSQMSKEDEEMA-RSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIRE 77

Query: 75  ELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLT 134
           ELE M DPM KEV  VRK+ID+  KELK LG   QKKE+EYKE L+ FNEK  EK QL+T
Sbjct: 78  ELETMADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLIT 137

Query: 135 TLMELLDQSERWRMNKLEELNKHI 159
            LMEL+ +SE+ R+ KL+EL++ I
Sbjct: 138 KLMELVGESEKLRLKKLDELSRSI 160

[Close]

BLAST of CmaCh18G009370 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 137.5 bits (345), Expect = 9.5e-33
Identity = 80/135 (59.26%), Postives = 101/135 (74.81%), Query Frame = 0


Query: 24  EDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPM 83
           ED EM  R  +S  +A+E+EIE+R+MEV+E+++ QL R E+E KRL+ I EELE M DPM
Sbjct: 56  EDEEM-TRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESMADPM 115

Query: 84  GKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQS 143
            KEV  VRK+ID+  KELK LG   QKKE+EYKE L+ FNEK  EK QL+T LMEL+ +S
Sbjct: 116 RKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMELVGES 175

Query: 144 ERWRMNKLEELNKHI 159
           E+ RM KLEEL+K I
Sbjct: 176 EKLRMIKLEELSKSI 189

[Close]

BLAST of CmaCh18G009370 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 79/135 (58.52%), Postives = 99/135 (73.33%), Query Frame = 0


Query: 24  EDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPM 83
           ED EM  R  +S  +A+E+EIE+R+MEV+E+++ QL R E+E KRL+ I EELE M DPM
Sbjct: 56  EDEEM-TRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESMADPM 115

Query: 84  GKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQS 143
            KEV  VRK+ID+  KELK LG   QKK  EYKE L+ FNEK  EK QL+T LMEL+ +S
Sbjct: 116 RKEVSVVRKKIDSVNKELKPLGSTVQKKVMEYKEALDTFNEKNREKVQLITKLMELVGES 175

Query: 144 ERWRMNKLEELNKHI 159
           E+ RM KLEEL+K I
Sbjct: 176 EKLRMIKLEELSKSI 189

The following BLAST results are available for this feature:

BLAST of CmaCh18G009370 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh18G009370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HV92	7.5e-78	100.00	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1	[more]
A0A6J1G1N1	7.8e-75	96.91	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1	[more]
A0A6J1HTV1	8.1e-64	99.28	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1	[more]
A0A6J1G1M5	2.2e-61	96.40	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1	[more]
A0A1S3BFW5	2.7e-59	81.48	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103489402 PE=3 SV=1	[more]

BLAST of CmaCh18G009370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968566.1	1.6e-77	100.00	uncharacterized protein LOC111467754 isoform X1 [Cucurbita maxima]	[more]
KAG6573875.1	4.2e-75	96.91	hypothetical protein SDJN03_27762, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945697.1	1.6e-74	96.91	uncharacterized protein LOC111449848 isoform X1 [Cucurbita moschata]	[more]
XP_023542304.1	4.7e-74	95.68	uncharacterized protein LOC111802239 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022968567.1	1.7e-63	99.28	uncharacterized protein LOC111467754 isoform X2 [Cucurbita maxima]	[more]

BLAST of CmaCh18G009370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09980.1	1.7e-34	59.03	Family of unknown function (DUF662)	[more]
AT3G52900.1	3.0e-34	60.29	Family of unknown function (DUF662)	[more]
AT3G52920.2	5.6e-33	56.94	Family of unknown function (DUF662)	[more]
AT2G36410.2	9.5e-33	59.26	Family of unknown function (DUF662)	[more]
AT2G36410.3	1.4e-31	58.52	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 34..79
None	No IPR available	COILS	Coil	Coil	coord: 94..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR21470:SF3	RAB6-INTERACTING GOLGIN (DUF662)	coord: 19..158
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 20..158 e-value: 2.5E-60 score: 202.8
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 19..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G009370.1	CmaCh18G009370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus