CmaCh18G008100 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G008100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	TCP family transcription factor
Location	Cma_Chr18: 7082679 .. 7083371 (+)
RNA-Seq Expression	CmaCh18G008100
Synteny	CmaCh18G008100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTCGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCTATTATTGCTGCCACCGGCACCGGCACCACTCCCGCCAATTTCTCTTCCATTTCTCTCTCCGTCAGAGGAAATGGCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGTCCCCAGCCGTTCTTTCTTGGCAAACGTGTGAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGGGGATTTCTCAGCCGGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAAGCATCGGCAGCGAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGATCGTCGTTGA

mRNA sequence

ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTCGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCTATTATTGCTGCCACCGGCACCGGCACCACTCCCGCCAATTTCTCTTCCATTTCTCTCTCCGTCAGAGGAAATGGCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGTCCCCAGCCGTTCTTTCTTGGCAAACGTGTGAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGGGGATTTCTCAGCCGGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAAGCATCGGCAGCGAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGATCGTCGTTGA

Coding sequence (CDS)

ATGTCAAATTCTGAAACTGCCGACAGCTCTAATGGCGCCGCCATCGACACCCACAAAAACCAGCCCTCTTCCAACGGAGCCCTCGCCGTTAAAAAGCCCCCTTCCAAGGACCGCCACAGCAAGGTCGACGGCCGTGGCCGTCGCATCCGTATGCCCATAATCTGCGCCGCTCGTGTCTTCCAGCTGACTCGTGAACTTGGTCATAAATCCGATGGCCAAACCATCGAGTGGCTCCTCCGTCAAGCAGAGCCTTCTATTATTGCTGCCACCGGCACCGGCACCACTCCCGCCAATTTCTCTTCCATTTCTCTCTCCGTCAGAGGAAATGGCAGCTCCGCCTCTCTCTCTTCCACTACTTCCACTCTCTCCCTCTCTCGTCCCCAGCCGTTCTTTCTTGGCAAACGTGTGAGAGCCGACGACGACGGCGGTACTGACGATGGGTTGGGAGTGGGTCCGAGTGGGTACTGGGCGATTCCGGCCAGACCGGATTACGGGCAGGTGTGGAGTTTCGCGGCTGCCGCCGCCGCGGAACAGGGGATTTCTCAGCCGGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAAGCATCGGCAGCGAGAGTTGGGAATTACCTTCCGGGTCATCTGAATTTACTGGCGTCCTTGTCCGGTGGCGGCGGTGCCGGCCGGCGGGAAGACGATCGTCGTTGA

Protein sequence

MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGISQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR

Homology

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BLAST of CmaCh18G008100 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 9.6e-68
Identity = 153/239 (64.02%), Postives = 174/239 (72.80%), Query Frame = 0


Query: 9   SSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 68
           SSNGA I+    QPS    + VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGH
Sbjct: 20  SSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 79

Query: 69  KSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQ 128
           KSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG  +S SL    ++L L    
Sbjct: 80  KSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSLDHKPTSL-LGGTS 139

Query: 129 PFFLGKRVRADDDG---------GTDDGLGVGPSGYWAIPARPDYGQVWSFAAA-----A 188
           PF LGKRVRAD+D          G D+     P+G+WA+PARPD+GQVWSFA A      
Sbjct: 140 PFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAGFWAVPARPDFGQVWSFAGAPQEMFL 199

Query: 189 AAEQGISQPASLFAQQQQ--PIREASAARVGNYLPGHLNLLASLSGGG-GAGRREDDRR 231
             +    QP  +  QQQQ   + EASAARVGNYLPGHLNLLASLSGG  G+ RRE+D R
Sbjct: 200 QQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLSGGSPGSDRREEDPR 250

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BLAST of CmaCh18G008100 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.8e-61
Identity = 150/251 (59.76%), Postives = 163/251 (64.94%), Query Frame = 0


Query: 10  SNGAAIDTHKNQPSSNGAL-AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 69
           SNG  ++    Q S+ G L AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH
Sbjct: 9   SNGIIVE----QTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 68

Query: 70  KSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQ 129
           KSDGQTIEWLLRQAEPSIIAATGTGTTPA+F                    ST SLS   
Sbjct: 69  KSDGQTIEWLLRQAEPSIIAATGTGTTPASF--------------------STASLSTSS 128

Query: 130 PFFLGKRV----RADDDGGTDDGL------------GVGPSGYWAIPARPDYGQVWSFAA 189
           PF LGKRV      +  GG   GL            G G  G+WA+PARPD+GQVWSFA 
Sbjct: 129 PFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSFAT 188

Query: 190 AAAAEQGIS---QPASLFAQQQQ----------PIREASAARVGNYLPG-HLNLLASLSG 229
            A  E   +   QPA+LF + QQ           + EASAARVGNYLPG HLNLLASLSG
Sbjct: 189 GAPPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSG 235

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BLAST of CmaCh18G008100 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.7e-33
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 0


Query: 25  NGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 84
           +  +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 85  RQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSS 118
           +QAEPS+IAATGTGT PANF+S+++S+R +GSS SL S
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPS 199

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BLAST of CmaCh18G008100 vs. ExPASy Swiss-Prot
Match: Q9C7G4 (Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.9e-32
Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 17  THKNQPSSNGALAV----KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 76
           T     SS  ALAV     K P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 77  QTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQPFFL 136
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  G S   S  +   S S P  F  
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASK--SSSSPLSFHS 160

Query: 137 GKRVRADDDGGTDDGLGVGPS 154
                 +D+ GT +G  V PS
Sbjct: 161 TGMSLYEDNNGT-NGSSVDPS 178

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BLAST of CmaCh18G008100 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 67/98 (68.37%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 23  SSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 82
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 83  EPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 121
           EP+I+AATGTGT PANFS++S+S+R +GS+ S   + S
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPSKS 145

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BLAST of CmaCh18G008100 vs. ExPASy TrEMBL
Match: A0A6J1HTJ0 (transcription factor TCP7-like OS=Cucurbita maxima OX=3661 GN=LOC111466455 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.3e-120
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120

Query: 121 TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180
           TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI
Sbjct: 121 TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180

Query: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 231
           SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR
Sbjct: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 230

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BLAST of CmaCh18G008100 vs. ExPASy TrEMBL
Match: A0A6J1G2A7 (transcription factor TCP7-like OS=Cucurbita moschata OX=3662 GN=LOC111450018 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.7e-118
Identity = 227/230 (98.70%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120

Query: 121 TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180
           TLSLSRPQPF LGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQ I
Sbjct: 121 TLSLSRPQPFILGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQRI 180

Query: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 231
           SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDD R
Sbjct: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDCR 230

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BLAST of CmaCh18G008100 vs. ExPASy TrEMBL
Match: A0A6J1KJS4 (transcription factor TCP7-like OS=Cucurbita maxima OX=3661 GN=LOC111493818 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.2e-102
Identity = 210/250 (84.00%), Postives = 219/250 (87.60%), Query Frame = 0


Query: 1   MSNSETADS---SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNS++ ++   SNGAAIDTHKNQPSSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 1   MSNSDSGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 60

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASL-- 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSS+SLSVRGNG S SL  
Sbjct: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 120

Query: 121 -SSTTSTLSLSRPQ------PFFLGKRVRADDDGGTDDGLGVGPS---GYWAIPARPDYG 180
            SSTTSTLSLSRPQ      PF LGKRVR+DDDGG DDG GVGP+   GYWAIPARPDYG
Sbjct: 121 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTGVGPTGPGGYWAIPARPDYG 180

Query: 181 QVWSFAAAAAAEQ-----GISQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGG 231
           QVWSFAAAA +E      GISQ ASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGG
Sbjct: 181 QVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGG 240

[Close]

BLAST of CmaCh18G008100 vs. ExPASy TrEMBL
Match: A0A6J1H1R0 (transcription factor TCP7-like OS=Cucurbita moschata OX=3662 GN=LOC111458790 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.0e-100
Identity = 207/250 (82.80%), Postives = 217/250 (86.80%), Query Frame = 0


Query: 1   MSNSETADS---SNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAA 60
           MSNS++ ++   SNGAA+DTHKNQPSSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICAA
Sbjct: 81  MSNSDSGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA 140

Query: 61  RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASL-- 120
           RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSS+SLSVRGNG S SL  
Sbjct: 141 RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS 200

Query: 121 -SSTTSTLSLSRPQ------PFFLGKRVRADDDGGTDDGLGVGPS---GYWAIPARPDYG 180
            SSTTSTLSLSRPQ      PF LGKRVR+DDDGG DDG GVGP+   GYWAIPARPDYG
Sbjct: 201 PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAGVGPTGPGGYWAIPARPDYG 260

Query: 181 QVWSFAAAAAAEQ-----GISQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGG 231
           QVWSFAAAA +E      GISQ ASLFAQ QQPIREASAARVGNYLP HLNLLASLSGGG
Sbjct: 261 QVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLNLLASLSGGG 320

[Close]

BLAST of CmaCh18G008100 vs. ExPASy TrEMBL
Match: A0A5A7SY02 (Transcription factor TCP7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00630 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.9e-96
Identity = 209/257 (81.32%), Postives = 215/257 (83.66%), Query Frame = 0


Query: 1   MSNSE-TADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60
           MSNS+ T   SN AAID+HKNQ SSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV
Sbjct: 1   MSNSDHTNGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARV 60

Query: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN-GSSASL--- 120
           FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSS+SLSVRGN G SASL   
Sbjct: 61  FQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASLSSP 120

Query: 121 SSTTSTLSLSRPQ------PFFLGKRVRADDDGGTDDGLGV-----------GPSGYWAI 180
           SSTTSTLSLSRPQ      PF LGKRVR+DDD   DDGLGV           GP GYWAI
Sbjct: 121 SSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-AKDDGLGVGQAVGSIVGPTGPGGYWAI 180

Query: 181 PARPDYGQVWSFAAAAAAEQ-----GISQPASLFAQQQQPIREASAARVGNYLPGHLNLL 231
           PARPDYGQVWSFAAAA +E      GISQ ASLFAQQQQPIREASAARVGNYLPGHLNLL
Sbjct: 181 PARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLL 240

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BLAST of CmaCh18G008100 vs. NCBI nr
Match: XP_022966888.1 (transcription factor TCP7-like [Cucurbita maxima])

HSP 1 Score: 442.2 bits (1136), Expect = 2.8e-120
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120

Query: 121 TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180
           TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI
Sbjct: 121 TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180

Query: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 231
           SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR
Sbjct: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 230

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BLAST of CmaCh18G008100 vs. NCBI nr
Match: KAG7012826.1 (Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437.6 bits (1124), Expect = 6.8e-119
Identity = 228/230 (99.13%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN SSASLSSTTS
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNASSASLSSTTS 120

Query: 121 TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180
           TLSLSRPQPF LGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI
Sbjct: 121 TLSLSRPQPFILGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180

Query: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 231
           SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR
Sbjct: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 230

[Close]

BLAST of CmaCh18G008100 vs. NCBI nr
Match: XP_023541120.1 (transcription factor TCP7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 227/230 (98.70%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN SSASLSSTTS
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNASSASLSSTTS 120

Query: 121 TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180
           TLSLSRPQPF LGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI
Sbjct: 121 TLSLSRPQPFILGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180

Query: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 231
           SQPASLFAQQQQPIRE+SAARVGNYLPGHLNLLASLSGGGGAGRREDDRR
Sbjct: 181 SQPASLFAQQQQPIRESSAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 230

[Close]

BLAST of CmaCh18G008100 vs. NCBI nr
Match: XP_022945919.1 (transcription factor TCP7-like [Cucurbita moschata])

HSP 1 Score: 433.7 bits (1114), Expect = 9.8e-118
Identity = 227/230 (98.70%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60
           MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF
Sbjct: 1   MSNSETADSSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVF 60

Query: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120
           QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS
Sbjct: 61  QLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 120

Query: 121 TLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQGI 180
           TLSLSRPQPF LGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQ I
Sbjct: 121 TLSLSRPQPFILGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAAAEQRI 180

Query: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 231
           SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDD R
Sbjct: 181 SQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDCR 230

[Close]

BLAST of CmaCh18G008100 vs. NCBI nr
Match: KAG6573751.1 (Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117
Identity = 228/235 (97.02%), Postives = 228/235 (97.02%), Query Frame = 0


Query: 1   MSNSETADSS-----NGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIIC 60
           MSNSETADSS     NGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIIC
Sbjct: 1   MSNSETADSSNGAATNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIIC 60

Query: 61  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASL 120
           AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGN SSASL
Sbjct: 61  AARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNASSASL 120

Query: 121 SSTTSTLSLSRPQPFFLGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAA 180
           SSTTSTLSLSRPQPF LGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAA
Sbjct: 121 SSTTSTLSLSRPQPFILGKRVRADDDGGTDDGLGVGPSGYWAIPARPDYGQVWSFAAAAA 180

Query: 181 AEQGISQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 231
           AEQGISQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR
Sbjct: 181 AEQGISQPASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGAGRREDDRR 235

[Close]

BLAST of CmaCh18G008100 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 258.1 bits (658), Expect = 6.9e-69
Identity = 153/239 (64.02%), Postives = 174/239 (72.80%), Query Frame = 0


Query: 9   SSNGAAIDTHKNQPSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 68
           SSNGA I+    QPS    + VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGH
Sbjct: 20  SSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 79

Query: 69  KSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQ 128
           KSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG  +S SL    ++L L    
Sbjct: 80  KSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTSLDHKPTSL-LGGTS 139

Query: 129 PFFLGKRVRADDDG---------GTDDGLGVGPSGYWAIPARPDYGQVWSFAAA-----A 188
           PF LGKRVRAD+D          G D+     P+G+WA+PARPD+GQVWSFA A      
Sbjct: 140 PFILGKRVRADEDSNNSHNHSSVGKDETFTTTPAGFWAVPARPDFGQVWSFAGAPQEMFL 199

Query: 189 AAEQGISQPASLFAQQQQ--PIREASAARVGNYLPGHLNLLASLSGGG-GAGRREDDRR 231
             +    QP  +  QQQQ   + EASAARVGNYLPGHLNLLASLSGG  G+ RRE+D R
Sbjct: 200 QQQHHHQQPLFVHQQQQQQAAMGEASAARVGNYLPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of CmaCh18G008100 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-62
Identity = 150/251 (59.76%), Postives = 163/251 (64.94%), Query Frame = 0


Query: 10  SNGAAIDTHKNQPSSNGAL-AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 69
           SNG  ++    Q S+ G L AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH
Sbjct: 9   SNGIIVE----QTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGH 68

Query: 70  KSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQ 129
           KSDGQTIEWLLRQAEPSIIAATGTGTTPA+F                    ST SLS   
Sbjct: 69  KSDGQTIEWLLRQAEPSIIAATGTGTTPASF--------------------STASLSTSS 128

Query: 130 PFFLGKRV----RADDDGGTDDGL------------GVGPSGYWAIPARPDYGQVWSFAA 189
           PF LGKRV      +  GG   GL            G G  G+WA+PARPD+GQVWSFA 
Sbjct: 129 PFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAVPARPDFGQVWSFAT 188

Query: 190 AAAAEQGIS---QPASLFAQQQQ----------PIREASAARVGNYLPG-HLNLLASLSG 229
            A  E   +   QPA+LF + QQ           + EASAARVGNYLPG HLNLLASLSG
Sbjct: 189 GAPPEMVFAQQQQPATLFVRHQQQQQASAAAAAAMGEASAARVGNYLPGHHLNLLASLSG 235

[Close]

BLAST of CmaCh18G008100 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 142.1 bits (357), Expect = 5.5e-34
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 0


Query: 25  NGALAVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 84
           +  +A KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 85  RQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSS 118
           +QAEPS+IAATGTGT PANF+S+++S+R +GSS SL S
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPS 199

[Close]

BLAST of CmaCh18G008100 vs. TAIR 10
Match: AT1G72010.1 (TCP family transcription factor )

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-33
Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 17  THKNQPSSNGALAV----KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 76
           T     SS  ALAV     K P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 77  QTIEWLLRQAEPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTSTLSLSRPQPFFL 136
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  G S   S  +   S S P  F  
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASK--SSSSPLSFHS 160

Query: 137 GKRVRADDDGGTDDGLGVGPS 154
                 +D+ GT +G  V PS
Sbjct: 161 TGMSLYEDNNGT-NGSSVDPS 178

[Close]

BLAST of CmaCh18G008100 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 134.8 bits (338), Expect = 8.8e-32
Identity = 67/98 (68.37%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 23  SSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 82
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 83  EPSIIAATGTGTTPANFSSISLSVRGNGSSASLSSTTS 121
           EP+I+AATGTGT PANFS++S+S+R +GS+ S   + S
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPPSKS 145

The following BLAST results are available for this feature:

BLAST of CmaCh18G008100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMX2	9.6e-68	64.02	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]
Q9FTA2	1.8e-61	59.76	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q93Z00	7.7e-33	72.45	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9C7G4	2.9e-32	58.16	Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1	[more]
Q9C518	1.2e-30	68.37	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]

BLAST of CmaCh18G008100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTJ0	1.3e-120	100.00	transcription factor TCP7-like OS=Cucurbita maxima OX=3661 GN=LOC111466455 PE=4 ...	[more]
A0A6J1G2A7	4.7e-118	98.70	transcription factor TCP7-like OS=Cucurbita moschata OX=3662 GN=LOC111450018 PE=...	[more]
A0A6J1KJS4	6.2e-102	84.00	transcription factor TCP7-like OS=Cucurbita maxima OX=3661 GN=LOC111493818 PE=4 ...	[more]
A0A6J1H1R0	2.0e-100	82.80	transcription factor TCP7-like OS=Cucurbita moschata OX=3662 GN=LOC111458790 PE=...	[more]
A0A5A7SY02	3.9e-96	81.32	Transcription factor TCP7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of CmaCh18G008100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966888.1	2.8e-120	100.00	transcription factor TCP7-like [Cucurbita maxima]	[more]
KAG7012826.1	6.8e-119	99.13	Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023541120.1	1.5e-118	98.70	transcription factor TCP7-like [Cucurbita pepo subsp. pepo]	[more]
XP_022945919.1	9.8e-118	98.70	transcription factor TCP7-like [Cucurbita moschata]	[more]
KAG6573751.1	4.9e-117	97.02	Transcription factor TCP7, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh18G008100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23280.1	6.9e-69	64.02	TCP family transcription factor	[more]
AT5G08330.1	1.3e-62	59.76	TCP family transcription factor	[more]
AT3G47620.1	5.5e-34	72.45	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G72010.1	2.1e-33	58.16	TCP family transcription factor	[more]
AT1G58100.1	8.8e-32	68.37	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 35..123 e-value: 7.4E-34 score: 117.6
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 35..89 score: 28.209229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..47
None	No IPR available	PANTHER	PTHR31072:SF7	TRANSCRIPTION FACTOR TCP21-RELATED	coord: 1..226
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 1..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G008100.1	CmaCh18G008100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding