CmaCh18G007250 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G007250
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-type domain-containing protein
Location	Cma_Chr18: 6558630 .. 6560651 (+)
RNA-Seq Expression	CmaCh18G007250
Synteny	CmaCh18G007250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTCTGTCCACAGAGGTGAGTAGAGGTCATTTCACTGCCACCCGCCATTGACTAAAGGAGCACAAAGCGCCCTAAAAGCTTCTTTTAGGGTTTCGAAATTGGGTTTGTTGGGGTTTTCCCTCTCAAATTTCCAGTTTCATTTTTGATTGGGGATTTTGGGTGATCGATTTCTAAACGAGAGATTGTTGTTCTTCCGCCATAGCCACGAAGAACAAGAGCTTTACGCTCTGGTTTTTCCCCTGTTTTCATCGGTTTCTTGCAGAAGACAAAACGGAATTTCTCGGATTATGTATTATCAGCTCGAGAAATTCTCTCATCACGATTCTTTACAAGTTTTGGAAGCCGATATTCAATATGCAAATTCTCTGTAAGTTTTGTTAATTTTCCCTTTCAATCATGATGATCGACGATTTTCTGAAAGGGTTTACGGATTTTTAGGTTATTTATTCTGTTCTTCGTTTGATTTTTGGGGTTTTAGGGCGGCGGCGATCCCCATGGCGAAAGGAGGTGCCTATCTTCAAATGAAATTGGTTTATAATCATTTAGCTCCCATTGTTTTGTTCTTGCTTCACTGGATGGATTGTTCTTGCTCATGCTTGTTTCCCAGATATTTAAGCCTCTTCCACATACTTGTGTACAAGGTTTGTAGGGTTCTTGTAATTGTTAGCCATTAGATGATTACAGGAAGCTATCTTGTTCTTGAGCTTGCTATCTAATTCAGGTATATCCAGAGGGAAAACAAAAACGAAGTATATCTAGACATGGAAGGAAGGCAACCATTAGGGAATTCTATGGTACTGAATTGTTTAGTTTAGCTAATTAGCTGCTGTTCTTTCAATTGTGAGTAGTTCTGAGTGTTCTGATCATTTGTGTTTGATCTTGTTTCGAATATCAGCTATAATATTGCCATCACTTCAGCGAATCCACAGTAGCTCGGATAAGCTGGATGATTGCAAGGAAGAGTGCCATTGGATTGAGATGCCGAGCAAGAAGAGAGGCGATAAAGATGTTAGACTCACGAATGTCGATATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCGTGCACCAAGATGGTTTTGCCAAATTGTTGTCATGCAATGTGCATCAAATGCTATCGAAATTGGTAAAAAAAACGAGTCTTATTATGCATCTTCGTTGTGTATGAAGCATTTTGAAGTGTGTTGTTTGTGTGTGTTCAAATGCTCGTTCGTCTCCTACATTACAGGAACACGAGGTCGGAGTCCTGCCCGTTTTGTCGTGGCAGCTTGAAGAGAGTTAACTCAGAGGACTTATGGGTGCTCACGTGTAGTGATGATGTGGTTGATGCCGAAACCGTTTCGAAGGAGGATACGTTGCGCTTCCATCGCTATATAAACAGCTTGCCAAAAGACTATCCAGACGCGCTGTTCGTAGTATATTCTGAATATCTATTCTAGGTTCGAGTAAAGTGTATAGAGGGAAATCCCGACTCGACATGTAAAGGTCTGTACTCTCCACTTCGTATAGAATAATGATTGATCAAATGGCATGCTTAGTTAGAACTAATAACGCATCTGGGCTCATGTCATTTCTAGTGTATGTTATGAACTTGAAAGTGCCATTTCATTTCTAATGCACTAATTGTCAATAAAGATGAATTTGGTCTCTGATGGAGTGTATAGTATGATAGTAAGGTTTGCTCGCACGTGTTTATCGACTTTGGGCTTCTGTCCTACCGAGACGACGAAAAGAGAGAGCATTTGAGCCATTTAAGATGTAGATTAAAGGTATTGTGAGATCACATATCGGTTTGAGTGGGGAACGAAACATTTCGTATAAGAGCGAGGAAACCTCTCTTTCGTGGACACGTTTTAAAACCTTGAGAGGAAGTGATATGAACCAAGAGACACCAATCATACAATATACTTGGGAAGAAAATGTGGTTGAAATTATTAAATGATATTTCCATTCGAGAAGAATGAATCTTCATTGTTATGAATTTTGGGTGGATCATAATTTATAGTAATTTAG

mRNA sequence

ATGCTTCTCTGTCCACAGAGAAGACAAAACGGAATTTCTCGGATTATGTATTATCAGCTCGAGAAATTCTCTCATCACGATTCTTTACAAGTTTTGGAAGCCGATATTCAATATGCAAATTCTCTGGCGGCGGCGATCCCCATGGCGAAAGGAGGTGCCTATCTTCAAATGAAATTGGTTTATAATCATTTAGCTCCCATTGTTTTGTTCTTGCTTCACTGGATGGATTGTTCTTGCTCATGCTTGTTTCCCAGATATTTAAGCCTCTTCCACATACTTGTGTACAAGGTATATCCAGAGGGAAAACAAAAACGAAGTATATCTAGACATGGAAGGAAGGCAACCATTAGGGAATTCTATGCTATAATATTGCCATCACTTCAGCGAATCCACAGTAGCTCGGATAAGCTGGATGATTGCAAGGAAGAGTGCCATTGGATTGAGATGCCGAGCAAGAAGAGAGGCGATAAAGATGTTAGACTCACGAATGTCGATATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCGTGCACCAAGATGGTTTTGCCAAATTGTTGTCATGCAATGTGCATCAAATGCTATCGAAATTGGAACACGAGGTCGGAGTCCTGCCCGTTTTGTCGTGGCAGCTTGAAGAGAGTTAACTCAGAGGACTTATGGGTGCTCACGTGTAGTGATGATGTGGTTGATGCCGAAACCGTTTCGAAGGAGGATACGTTGCGCTTCCATCGCTATATAAACAGCTTGCCAAAAGACTATCCAGACGCGCTGTTCGTAGTATATTCTGAATATCTATTCTAGGTTCGAGTAAAGTGTATAGAGGGAAATCCCGACTCGACATGTAAAGGTCTGTACTCTCCACTTCGTATAGAATAATGATTGATCAAATGGCATGCTTAGTTAGAACTAATAACGCATCTGGGCTCATGTCATTTCTAGTGTATGTTATGAACTTGAAAGTGCCATTTCATTTCTAATGCACTAATTGTCAATAAAGATGAATTTGGTCTCTGATGGAGTGTATAGTATGATAGTAAGGTTTGCTCGCACGTGTTTATCGACTTTGGGCTTCTGTCCTACCGAGACGACGAAAAGAGAGAGCATTTGAGCCATTTAAGATGTAGATTAAAGGTATTGTGAGATCACATATCGGTTTGAGTGGGGAACGAAACATTTCGTATAAGAGCGAGGAAACCTCTCTTTCGTGGACACGTTTTAAAACCTTGAGAGGAAGTGATATGAACCAAGAGACACCAATCATACAATATACTTGGGAAGAAAATGTGGTTGAAATTATTAAATGATATTTCCATTCGAGAAGAATGAATCTTCATTGTTATGAATTTTGGGTGGATCATAATTTATAGTAATTTAG

Coding sequence (CDS)

ATGCTTCTCTGTCCACAGAGAAGACAAAACGGAATTTCTCGGATTATGTATTATCAGCTCGAGAAATTCTCTCATCACGATTCTTTACAAGTTTTGGAAGCCGATATTCAATATGCAAATTCTCTGGCGGCGGCGATCCCCATGGCGAAAGGAGGTGCCTATCTTCAAATGAAATTGGTTTATAATCATTTAGCTCCCATTGTTTTGTTCTTGCTTCACTGGATGGATTGTTCTTGCTCATGCTTGTTTCCCAGATATTTAAGCCTCTTCCACATACTTGTGTACAAGGTATATCCAGAGGGAAAACAAAAACGAAGTATATCTAGACATGGAAGGAAGGCAACCATTAGGGAATTCTATGCTATAATATTGCCATCACTTCAGCGAATCCACAGTAGCTCGGATAAGCTGGATGATTGCAAGGAAGAGTGCCATTGGATTGAGATGCCGAGCAAGAAGAGAGGCGATAAAGATGTTAGACTCACGAATGTCGATATGAAGCGAGAAGACGAGTGTGGTATTTGCTTGGAGCCGTGCACCAAGATGGTTTTGCCAAATTGTTGTCATGCAATGTGCATCAAATGCTATCGAAATTGGAACACGAGGTCGGAGTCCTGCCCGTTTTGTCGTGGCAGCTTGAAGAGAGTTAACTCAGAGGACTTATGGGTGCTCACGTGTAGTGATGATGTGGTTGATGCCGAAACCGTTTCGAAGGAGGATACGTTGCGCTTCCATCGCTATATAAACAGCTTGCCAAAAGACTATCCAGACGCGCTGTTCGTAGTATATTCTGAATATCTATTCTAG

Protein sequence

MLLCPQRRQNGISRIMYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWMDCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSDKLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVVYSEYLF

Homology

[Close]

BLAST of CmaCh18G007250 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.7e-55
Identity = 112/241 (46.47%), Postives = 152/241 (63.07%), Query Frame = 0


Query: 24  SHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWMDCSCSCLF 83
           S  DSL+ LEADIQ+AN+LA+  P    G Y+QM+L Y+  A + LFLL W DC     F
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----F 63

Query: 84  PRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSDKLDDCKEE 143
              L L  IL+YK Y +G  K ++S H RK +IREFY ++ PSL ++H     +++ K++
Sbjct: 64  AGALGLLRILIYKAYVDG--KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 123

Query: 144 CHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRS 203
               +   KK      +++ +D++RE+ECGICLE   K+VLP C H+MCI CYRNW  RS
Sbjct: 124 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 183

Query: 204 ESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVVY 263
           +SCPFCRGSLKRVNS DLW+ TCS ++ D   + KE+  R   YI+ LP    D   V Y
Sbjct: 184 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 238

Query: 264 S 265
           +
Sbjct: 244 A 238

[Close]

BLAST of CmaCh18G007250 vs. ExPASy Swiss-Prot
Match: Q4VBT5 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.0e-04
Identity = 26/85 (30.59%), Postives = 41/85 (48.24%), Query Frame = 0


Query: 156 DKDVRLTNVDMKRED-ECGICLE-------PCTKM--VLPNCCHAMCIKCYRNWNTRSE- 215
           +KD+ ++    + +D  CG+C+E       P  +   +L NCCH  C+KC R W +  + 
Sbjct: 219 EKDMEISFAIQRSKDMMCGVCMEVVFEKTNPSERRFGILSNCCHCYCLKCIRKWRSAKQF 278

Query: 216 ------SCPFCRGSLKRVNSEDLWV 224
                 SCP CR +   V   + WV
Sbjct: 279 ESKIIKSCPECRITSNFVIPSEYWV 303

[Close]

BLAST of CmaCh18G007250 vs. ExPASy TrEMBL
Match: A0A6J1HVW5 (RING-H2 finger protein ATL47 OS=Cucurbita maxima OX=3661 GN=LOC111466639 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.7e-148
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM
Sbjct: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 120

Query: 136 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 195
           KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 196 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 255
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 256 PDALFVVYSEYLF 269
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of CmaCh18G007250 vs. ExPASy TrEMBL
Match: A0A6J1G051 (RING-H2 finger protein ATL47-like OS=Cucurbita moschata OX=3662 GN=LOC111449509 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.2e-142
Identity = 245/253 (96.84%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQLEKF HHDSLQVLEADIQYANSLAAAIPMAK GAYLQMKLVYNHLAPIVLFLL WM
Sbjct: 1   MYYQLEKFPHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIH S D
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120

Query: 136 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 195
           KLDDCKEECHWIEM S+KRGDKDVRLTNVD KREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMHSEKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 196 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 255
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 256 PDALFVVYSEYLF 269
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of CmaCh18G007250 vs. ExPASy TrEMBL
Match: A0A5D3CUV6 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001890 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.2e-134
Identity = 229/252 (90.87%), Postives = 239/252 (94.84%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQLEKFSH DSL+VLEADIQYANSLAAAIPMAKGG YLQMKLVYNHLAPIVLFLL WM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           DCSC+CL PRYL+LFHILVYKVYPEGKQK++ISRHGRKATIR+FYAIILPSLQRIH S D
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 136 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 195
           KLDDCKE  HWIEM SKKRGDKD RL N+DMKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 196 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 255
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKED L+FHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 256 PDALFVVYSEYL 268
           PDALF+VYSEYL
Sbjct: 241 PDALFIVYSEYL 252

[Close]

BLAST of CmaCh18G007250 vs. ExPASy TrEMBL
Match: A0A1S3BE96 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo OX=3656 GN=LOC103488929 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 4.2e-134
Identity = 229/252 (90.87%), Postives = 239/252 (94.84%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQLEKFSH DSL+VLEADIQYANSLAAAIPMAKGG YLQMKLVYNHLAPIVLFLL WM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           DCSC+CL PRYL+LFHILVYKVYPEGKQK++ISRHGRKATIR+FYAIILPSLQRIH S D
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 136 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 195
           KLDDCKE  HWIEM SKKRGDKD RL N+DMKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 196 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 255
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKED L+FHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 256 PDALFVVYSEYL 268
           PDALF+VYSEYL
Sbjct: 241 PDALFIVYSEYL 252

[Close]

BLAST of CmaCh18G007250 vs. ExPASy TrEMBL
Match: A0A0A0KPZ5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591750 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 7.9e-133
Identity = 227/252 (90.08%), Postives = 239/252 (94.84%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQLEKFSH DSL+VLEADIQYANSLAAAIPMAKGG YLQMKLVYNHLAPIVLFLL WM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           DCSC+CL PRYL+LFHILVYKV+PEGKQK++ISRHGRKATIR+FYAIILPSLQRIH S D
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 136 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 195
           KLDDCKEE HWIEM SKKR DKD RL N++MKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 196 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 255
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKED L+FHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 256 PDALFVVYSEYL 268
           PDALF+VYSEYL
Sbjct: 241 PDALFIVYSEYL 252

[Close]

BLAST of CmaCh18G007250 vs. NCBI nr
Match: XP_022967134.1 (RING-H2 finger protein ATL47 [Cucurbita maxima])

HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM
Sbjct: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 120

Query: 136 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 195
           KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 196 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 255
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 256 PDALFVVYSEYLF 269
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of CmaCh18G007250 vs. NCBI nr
Match: XP_023542538.1 (RING-H2 finger protein ATL47-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521.2 bits (1341), Expect = 5.4e-144
Identity = 248/254 (97.64%), Postives = 249/254 (98.03%), Query Frame = 0


Query: 15  IMYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHW 74
           +MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAK GAYLQMKLVYNHLAPIVLFLL W
Sbjct: 1   MMYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQW 60

Query: 75  MDCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSS 134
           MDCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIH S 
Sbjct: 61  MDCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSL 120

Query: 135 DKLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIK 194
           DKLDDCKEECHWIEMPSKKRGDKDVRLTNVD KREDECGICLEPCTKMVLPNCCHAMCIK
Sbjct: 121 DKLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIK 180

Query: 195 CYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKD 254
           CYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKD
Sbjct: 181 CYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKD 240

Query: 255 YPDALFVVYSEYLF 269
           YPDALFVVYSEYLF
Sbjct: 241 YPDALFVVYSEYLF 254

[Close]

BLAST of CmaCh18G007250 vs. NCBI nr
Match: KAG6573671.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 520.8 bits (1340), Expect = 7.1e-144
Identity = 248/253 (98.02%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAK GAYLQMKLVYNHLAPIVLFLL WM
Sbjct: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIH S D
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120

Query: 136 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 195
           KLDDCKEECHWIEMPSKKRGDKDVRLTNVD KREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 196 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 255
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 256 PDALFVVYSEYLF 269
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of CmaCh18G007250 vs. NCBI nr
Match: XP_022945193.1 (RING-H2 finger protein ATL47-like [Cucurbita moschata])

HSP 1 Score: 513.8 bits (1322), Expect = 8.7e-142
Identity = 245/253 (96.84%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQLEKF HHDSLQVLEADIQYANSLAAAIPMAK GAYLQMKLVYNHLAPIVLFLL WM
Sbjct: 1   MYYQLEKFPHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIH S D
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120

Query: 136 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 195
           KLDDCKEECHWIEM S+KRGDKDVRLTNVD KREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMHSEKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 196 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 255
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 256 PDALFVVYSEYLF 269
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of CmaCh18G007250 vs. NCBI nr
Match: XP_038893224.1 (E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida] >XP_038893225.1 E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida])

HSP 1 Score: 491.1 bits (1263), Expect = 6.0e-135
Identity = 232/252 (92.06%), Postives = 240/252 (95.24%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQLEKFSH DSL+VLEADIQYANSLAAAIPMAKGG YLQMKLVYNHLAPIVLFLL WM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           DCSC+CL PRYL+LFHILVYKVYPEGKQKR+ISRHGRKATIR+FYAIILPSLQRIH S D
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 136 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 195
           KLDDCKE  HWIEM SKKRGDKD RL N+DMKREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 196 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 255
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAET+SKED LRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETLSKEDMLRFHRYINSLPKDY 240

Query: 256 PDALFVVYSEYL 268
           PDALFVVYSEYL
Sbjct: 241 PDALFVVYSEYL 252

[Close]

BLAST of CmaCh18G007250 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 339.3 bits (869), Expect = 2.7e-93
Identity = 168/257 (65.37%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 16  MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 75
           MYYQL K S+ DSL++LEADI++AN LAA IPM K G  LQMKLV ++LAP  +FLL WM
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 76  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 135
           D   SCL PRY   FHIL+YKV  +G+  R  SR+GRKATIREFY +ILPSL+R+H +  
Sbjct: 61  D--FSCLLPRYFDFFHILIYKVRADGRWNR--SRYGRKATIREFYGVILPSLERLHIN-- 120

Query: 136 KLDDCKEECHWIEMP---SKKRGDKDVR--LTNVDMKREDECGICLEPCTKMVLPNCCHA 195
              D  +E  W   P   +KK+ D +    + ++D++REDECGICLEPCTKMVLPNCCHA
Sbjct: 121 -FADLPDESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHA 180

Query: 196 MCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINS 255
           MCIKCYRNWNT+SESCPFCRGS+KRVNSEDLWVLTC +DVVD ETV+KED LRF+ +INS
Sbjct: 181 MCIKCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINS 240

Query: 256 LPKDYPDALFVVYSEYL 268
           LPKDYP+A F+VY+EYL
Sbjct: 241 LPKDYPEAAFLVYNEYL 250

[Close]

BLAST of CmaCh18G007250 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 314.7 bits (805), Expect = 7.2e-86
Identity = 151/244 (61.89%), Postives = 189/244 (77.46%), Query Frame = 0


Query: 24  SHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWMDCSCSCLF 83
           S+++SL+VLEAD+Q+ANSLA AIPM K    LQMKLV+++ A ++LFLL W+D S SCL 
Sbjct: 15  SYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLI 74

Query: 84  PRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSDKLDDCKEE 143
           PRYL+LFH+LVYKV  +G+ K  ++ HGRKATI EFY +ILPSLQ +HS+ D+L+     
Sbjct: 75  PRYLNLFHVLVYKVQSDGQPK--LTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIG 134

Query: 144 CHWIEMPSK-KRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTR 203
                +  K  +  +  R +N  ++RE+ECGICLE CTKMVLPNCCH+MCIKCYRNWN +
Sbjct: 135 FDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLK 194

Query: 204 SESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVV 263
           S+SCPFCRGS+KRVNSEDLWVL   +DVVD  T S+ED  RF+ YINSLPKDYP+ALFVV
Sbjct: 195 SQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVV 254

Query: 264 YSEY 267
           Y EY
Sbjct: 255 YYEY 256

[Close]

BLAST of CmaCh18G007250 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 281.6 bits (719), Expect = 6.7e-76
Identity = 134/220 (60.91%), Postives = 166/220 (75.45%), Query Frame = 0


Query: 48  MAKGGAYLQMKLVYNHLAPIVLFLLHWMDCSCSCLFPRYLSLFHILVYKVYPEGKQKRSI 107
           M K    LQMKLV+++ A ++LFLL W+D S SCL PRYL+LFH+LVYKV  +G+ K  +
Sbjct: 1   MGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPK--L 60

Query: 108 SRHGRKATIREFYAIILPSLQRIHSSSDKLDDCKEECHWIEMPSK-KRGDKDVRLTNVDM 167
           + HGRKATI EFY +ILPSLQ +HS+ D+L+          +  K  +  +  R +N  +
Sbjct: 61  TTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEARSSRFSNAGL 120

Query: 168 KREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTC 227
           +RE+ECGICLE CTKMVLPNCCH+MCIKCYRNWN +S+SCPFCRGS+KRVNSEDLWVL  
Sbjct: 121 EREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAG 180

Query: 228 SDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVVYSEY 267
            +DVVD  T S+ED  RF+ YINSLPKDYP+ALFVVY EY
Sbjct: 181 DNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of CmaCh18G007250 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-56
Identity = 112/241 (46.47%), Postives = 152/241 (63.07%), Query Frame = 0


Query: 24  SHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWMDCSCSCLF 83
           S  DSL+ LEADIQ+AN+LA+  P    G Y+QM+L Y+  A + LFLL W DC     F
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----F 63

Query: 84  PRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSDKLDDCKEE 143
              L L  IL+YK Y +G  K ++S H RK +IREFY ++ PSL ++H     +++ K++
Sbjct: 64  AGALGLLRILIYKAYVDG--KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 123

Query: 144 CHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRS 203
               +   KK      +++ +D++RE+ECGICLE   K+VLP C H+MCI CYRNW  RS
Sbjct: 124 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 183

Query: 204 ESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVVY 263
           +SCPFCRGSLKRVNS DLW+ TCS ++ D   + KE+  R   YI+ LP    D   V Y
Sbjct: 184 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 238

Query: 264 S 265
           +
Sbjct: 244 A 238

[Close]

BLAST of CmaCh18G007250 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 2.5e-54
Identity = 111/242 (45.87%), Postives = 153/242 (63.22%), Query Frame = 0


Query: 20  LEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWMDCSC 79
           + K S  DSL+ LEADIQ+AN++A   P  K GA +QM+L Y   A  +LFL+ W DC  
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHL 60

Query: 80  SCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSDKLDD 139
           +      L L  +L+Y  Y +GK   S+  + RK +I++FYA+I PSL ++      LDD
Sbjct: 61  A----GTLGLLRVLIYMTYADGKTTMSV--YERKTSIKDFYAVIFPSLLQLERGITDLDD 120

Query: 140 CKE-ECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKCYRN 199
            K+ E   I   +K   +K V+L+ +D++RE+ECGIC+E    +VLPNC H++CIKCYR+
Sbjct: 121 RKQKEVCKIRYRNKDETEK-VKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRD 180

Query: 200 WNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDA 259
           W+ RSESCPFCR SLKRVNS DLW+L    D V+  T+ +E+  R   YI  LP   PD 
Sbjct: 181 WHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQ 235

Query: 260 LF 261
           +F
Sbjct: 241 VF 235

The following BLAST results are available for this feature:

BLAST of CmaCh18G007250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	1.7e-55	46.47	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q4VBT5	3.0e-04	30.59	Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 P...	[more]

BLAST of CmaCh18G007250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HVW5	6.7e-148	100.00	RING-H2 finger protein ATL47 OS=Cucurbita maxima OX=3661 GN=LOC111466639 PE=4 SV...	[more]
A0A6J1G051	4.2e-142	96.84	RING-H2 finger protein ATL47-like OS=Cucurbita moschata OX=3662 GN=LOC111449509 ...	[more]
A0A5D3CUV6	4.2e-134	90.87	E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BE96	4.2e-134	90.87	E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo OX=3656 GN=LOC103488929 PE=4 ...	[more]
A0A0A0KPZ5	7.9e-133	90.08	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591750 P...	[more]

BLAST of CmaCh18G007250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967134.1	1.4e-147	100.00	RING-H2 finger protein ATL47 [Cucurbita maxima]	[more]
XP_023542538.1	5.4e-144	97.64	RING-H2 finger protein ATL47-like [Cucurbita pepo subsp. pepo]	[more]
KAG6573671.1	7.1e-144	98.02	E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945193.1	8.7e-142	96.84	RING-H2 finger protein ATL47-like [Cucurbita moschata]	[more]
XP_038893224.1	6.0e-135	92.06	E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida] >XP_038893225.1 E3 ub...	[more]

BLAST of CmaCh18G007250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	2.7e-93	65.37	RING/U-box superfamily protein	[more]
AT1G13195.1	7.2e-86	61.89	RING/U-box superfamily protein	[more]
AT1G13195.2	6.7e-76	60.91	RING/U-box superfamily protein	[more]
AT5G01520.1	1.2e-56	46.47	RING/U-box superfamily protein	[more]
AT3G47160.1	2.5e-54	45.87	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 172..209 e-value: 8.3E-4 score: 28.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 170..210 e-value: 3.5E-7 score: 30.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 172..210 score: 11.722122
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 148..220 e-value: 7.1E-12 score: 46.5
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 19..267
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 19..267
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 162..215
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 187..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G007250.1	CmaCh18G007250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity