CmaCh18G006710 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh18G006710
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionDnaJ domain-containing protein
LocationCma_Chr18: 6209617 .. 6210910 (+)
RNA-Seq ExpressionCmaCh18G006710
SyntenyCmaCh18G006710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAATCTTTTAAGCGGCAGAGTGCTAAGATTGATAAACGTGGAAGAAGGCGAGACCACGGACAAGGAGATATTGAGAGAGATGCAAGGCGACGAAGCCAGAATCTTGCTCGGATTCTCTCCCGGTTCCCGCCCGTCTCCTTCCCAGGTGCCGTATCAAAACCATATACACATCTCATCTCTCTCAATTTCCTCTAAATCCATTCTTTCTGATCTCCAATCTATGAGCAATATGAATAGATTTTGAAGATGAATCTTCAGCGACGATCTTTGAAGAAGACAATGGCGGATTGTTGCTCCAAGTAGACGGATGTTTGGTTAGGGTTTATACGTAATTGAGCAATGTGTGTGTTAACGTTCTTGTTCTTCATCGCAGGTAAAAGAAGCTTACAAAAGGAAGGTATGGGATTCTCATCCTGACCTGTTCCCTGCTCATCAAAAGTCTCAGGCCGAATCCAAATTCAAACTGGTAAGGAATAAGGAACGCGTTTCCATTGAAGCCGCGACTATATAATGCGTTCATTTCATGAATCCAAGAATTTGATATATCATCTGCTGCAGATTTCCGAAGCTTATTCATTCCTGTTATCTGGTAATTCTCATGTATTCACAGCTGATCCGATAGATCACCAAAAACGAATTCAATTGCTTCCACGTTTGATTATAGCCTAAACGAAATCTTTGCAGGTGCCCGAAGAGGAGATTCACATTCAAGTAAACATATCATGGCTTTGTTAGTTCATTCTGGGATACGATTTGATGAGCCAACTATGAACAGCTTCATATGAACGGGTTGTAAGAAGGGGGGTTCCGGTCTCGCAAGGAGGGAGAAGAAATCATGCCTTGATCAAGCTTCCCTTCCTGTTACTGATTCTGGGGACTGTTTCACTTGGAGGATTGAATGTTTCCCGGTGAGTTCGAAGCATCAAAACGTTATGAATTGTTCAAAAAAATCCACCATTTTCAAGAAGTTGCTTGCTTTACTTCATTTTTTCAGGGCTTACAAAAAGCAGAAGGAAGCATATCCTTCTCACAATCCTTTTCTTCCTTGAGGCCAGGAAGAATTATGCCAAAAACTAGAGTGTTCTATGTTTAGTTTTGTGATTAGTTTATTTGCAAGAATAAATGTTAAAGGATAGGAAAATTAACAAGCGGATACATGATAGGTGCAAGGGGAAAGAGTGTACATTTGTTATTCTAATTTCAAGTCAAAATTGGTATGCCACAGAGTATTGCTCTGTTAGCGCCTTATATACAACCCGAACACGGGTTAAATTGATTGATTTTATTGTTCGA

mRNA sequence

CCAATCTTTTAAGCGGCAGAGTGCTAAGATTGATAAACGTGGAAGAAGGCGAGACCACGGACAAGGAGATATTGAGAGAGATGCAAGGCGACGAAGCCAGAATCTTGCTCGGATTCTCTCCCGGTTCCCGCCCGTCTCCTTCCCAGGTAAAAGAAGCTTACAAAAGGAAGGTATGGGATTCTCATCCTGACCTGTTCCCTGCTCATCAAAAGTCTCAGGCCGAATCCAAATTCAAACTGATTTCCGAAGCTTATTCATTCCTGTTATCTGGTGCCCGAAGAGGAGATTCACATTCAAGTAAACATATCATGGCTTTGTTAGGGGGTTCCGGTCTCGCAAGGAGGGAGAAGAAATCATGCCTTGATCAAGCTTCCCTTCCTGTTACTGATTCTGGGGACTGTTTCACTTGGAGGATTGAATGTTTCCCGGGCTTACAAAAAGCAGAAGGAAGCATATCCTTCTCACAATCCTTTTCTTCCTTGAGGCCAGGAAGAATTATGCCAAAAACTAGAGTGTTCTATGTTTAGTTTTGTGATTAGTTTATTTGCAAGAATAAATGTTAAAGGATAGGAAAATTAACAAGCGGATACATGATAGGTGCAAGGGGAAAGAGTGTACATTTGTTATTCTAATTTCAAGTCAAAATTGGTATGCCACAGAGTATTGCTCTGTTAGCGCCTTATATACAACCCGAACACGGGTTAAATTGATTGATTTTATTGTTCGA

Coding sequence (CDS)

ATGCAAGGCGACGAAGCCAGAATCTTGCTCGGATTCTCTCCCGGTTCCCGCCCGTCTCCTTCCCAGGTAAAAGAAGCTTACAAAAGGAAGGTATGGGATTCTCATCCTGACCTGTTCCCTGCTCATCAAAAGTCTCAGGCCGAATCCAAATTCAAACTGATTTCCGAAGCTTATTCATTCCTGTTATCTGGTGCCCGAAGAGGAGATTCACATTCAAGTAAACATATCATGGCTTTGTTAGGGGGTTCCGGTCTCGCAAGGAGGGAGAAGAAATCATGCCTTGATCAAGCTTCCCTTCCTGTTACTGATTCTGGGGACTGTTTCACTTGGAGGATTGAATGTTTCCCGGGCTTACAAAAAGCAGAAGGAAGCATATCCTTCTCACAATCCTTTTCTTCCTTGAGGCCAGGAAGAATTATGCCAAAAACTAGAGTGTTCTATGTTTAG

Protein sequence

MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSFLLSGARRGDSHSSKHIMALLGGSGLARREKKSCLDQASLPVTDSGDCFTWRIECFPGLQKAEGSISFSQSFSSLRPGRIMPKTRVFYV
Homology
BLAST of CmaCh18G006710 vs. ExPASy Swiss-Prot
Match: Q2GLU9 (Chaperone protein DnaJ OS=Anaplasma phagocytophilum (strain HZ) OX=212042 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.8e-05
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 0

Query: 9  LLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSFLLSGARR 68
          LLG S G+  S  ++K++Y++KV++ HPD  P ++  +AE KFK ISEAY  L    +R
Sbjct: 9  LLGVSRGA--SEEEIKKSYRKKVFEYHPDRNPGNK--EAEEKFKKISEAYDVLTDSDKR 63

BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A6J1HU66 (uncharacterized protein LOC111466618 OS=Cucurbita maxima OX=3661 GN=LOC111466618 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60

Query: 61 LLSGARRGDSHSSKH 76
          LLSGARRGDSHS+ +
Sbjct: 61 LLSGARRGDSHSTSY 75

BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A6J1G0D6 (uncharacterized protein LOC111449543 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449543 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.3e-32
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFP HQKSQAESKFKLISEAYSF
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPVHQKSQAESKFKLISEAYSF 60

Query: 61 LLSGARRGDSHSSKH 76
          LLSGARRGDSHS+ +
Sbjct: 61 LLSGARRGDSHSASY 75

BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A0A0KRW5 (Heat shock protein DnaJ, N-terminal OS=Cucumis sativus OX=3659 GN=Csa_5G585980 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27
Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          MQGDEAR LLGFSPGSRPS SQVKEAYKR VWD+HPDLFPAHQK QAESKFKLISEAYS 
Sbjct: 1  MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60

Query: 61 LLSGARRGDSHSSKH 76
          LLSG+R GDSHS+ +
Sbjct: 61 LLSGSRNGDSHSATY 75

BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A5D3CW64 (Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002760 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.2e-27
Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          M+GDEAR LLGFSPGSRPS SQVKEAYKR VWD+HPDLFPAHQK QAESKFKLISEAYS 
Sbjct: 1  MRGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60

Query: 61 LLSGARRGDSHSSKH 76
          LLSG+R GDSHS+ +
Sbjct: 61 LLSGSRNGDSHSATY 75

BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A6J1G098 (uncharacterized protein LOC111449543 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449543 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.2e-27
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFP HQKSQAESKFKLISEAYSF
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPVHQKSQAESKFKLISEAYSF 60

Query: 61 LLSG 65
          LLSG
Sbjct: 61 LLSG 64

BLAST of CmaCh18G006710 vs. NCBI nr
Match: XP_022967118.1 (uncharacterized protein LOC111466618 [Cucurbita maxima])

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60

Query: 61 LLSGARRGDSHSSKH 76
          LLSGARRGDSHS+ +
Sbjct: 61 LLSGARRGDSHSTSY 75

BLAST of CmaCh18G006710 vs. NCBI nr
Match: XP_023541159.1 (uncharacterized protein LOC111801402 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60

Query: 61 LLSGARRGDSHSSKH 76
          LLSGARRGDSHS+ +
Sbjct: 61 LLSGARRGDSHSASY 75

BLAST of CmaCh18G006710 vs. NCBI nr
Match: KAG6573609.1 (hypothetical protein SDJN03_27496, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60

Query: 61 LLSGARRGDSHSSKH 76
          LLSGARRGDSHS+ +
Sbjct: 61 LLSGARRGDSHSASY 75

BLAST of CmaCh18G006710 vs. NCBI nr
Match: XP_022945242.1 (uncharacterized protein LOC111449543 isoform X1 [Cucurbita moschata])

HSP 1 Score: 147.9 bits (372), Expect = 6.9e-32
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFP HQKSQAESKFKLISEAYSF
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPVHQKSQAESKFKLISEAYSF 60

Query: 61 LLSGARRGDSHSSKH 76
          LLSGARRGDSHS+ +
Sbjct: 61 LLSGARRGDSHSASY 75

BLAST of CmaCh18G006710 vs. NCBI nr
Match: XP_004135355.1 (uncharacterized protein LOC101221514 [Cucumis sativus] >KGN51624.1 hypothetical protein Csa_009442 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 3.0e-27
Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          MQGDEAR LLGFSPGSRPS SQVKEAYKR VWD+HPDLFPAHQK QAESKFKLISEAYS 
Sbjct: 1  MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLISEAYSC 60

Query: 61 LLSGARRGDSHSSKH 76
          LLSG+R GDSHS+ +
Sbjct: 61 LLSGSRNGDSHSATY 75

BLAST of CmaCh18G006710 vs. TAIR 10
Match: AT3G62190.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 3.8e-20
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          M+ +EA+ILLGF P SRP PSQVK AY++KVW+SHPDLFP  QK  AESKFK ISEAYS 
Sbjct: 1  MEVEEAKILLGFPPNSRPDPSQVKAAYRKKVWESHPDLFPDDQKLVAESKFKSISEAYSC 60

Query: 61 LLSGARRGDSHSSKHIMALLGGSGLAR 88
          L SG  +G  +    + + +  +G+ R
Sbjct: 61 LESGDVKGQWYYRAGVYSRVVKTGVPR 87

BLAST of CmaCh18G006710 vs. TAIR 10
Match: AT3G62190.2 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 4.2e-19
Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 0

Query: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSF 60
          M+ +EA+ILLGF P SRP PSQVK AY++KVW+SHPDLFP  QK  AESKFK ISEAYS 
Sbjct: 1  MEVEEAKILLGFPPNSRPDPSQVKAAYRKKVWESHPDLFPDDQKLVAESKFKSISEAYSC 60

Query: 61 LLS 64
          L S
Sbjct: 61 LES 63

BLAST of CmaCh18G006710 vs. TAIR 10
Match: AT3G47940.1 (DNAJ heat shock family protein )

HSP 1 Score: 42.0 bits (97), Expect = 5.0e-04
Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0

Query: 23 VKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSFLLSGARR 68
          +K+AYKR     HPD  P+ ++ +AE+KFK ISEAY  L    +R
Sbjct: 20 LKKAYKRLAMIWHPDKNPSTRRDEAEAKFKRISEAYDVLSDPQKR 64

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q2GLU99.8e-0544.07Chaperone protein DnaJ OS=Anaplasma phagocytophilum (strain HZ) OX=212042 GN=dna... [more]
Match NameE-valueIdentityDescription
A0A6J1HU661.1e-3296.00uncharacterized protein LOC111466618 OS=Cucurbita maxima OX=3661 GN=LOC111466618... [more]
A0A6J1G0D63.3e-3294.67uncharacterized protein LOC111449543 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A0A0KRW51.5e-2785.33Heat shock protein DnaJ, N-terminal OS=Cucumis sativus OX=3659 GN=Csa_5G585980 P... [more]
A0A5D3CW644.2e-2784.00Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3... [more]
A0A6J1G0984.2e-2798.44uncharacterized protein LOC111449543 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
XP_022967118.12.4e-3296.00uncharacterized protein LOC111466618 [Cucurbita maxima][more]
XP_023541159.12.4e-3296.00uncharacterized protein LOC111801402 isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG6573609.12.4e-3296.00hypothetical protein SDJN03_27496, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022945242.16.9e-3294.67uncharacterized protein LOC111449543 isoform X1 [Cucurbita moschata][more]
XP_004135355.13.0e-2785.33uncharacterized protein LOC101221514 [Cucumis sativus] >KGN51624.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
AT3G62190.13.8e-2056.32Chaperone DnaJ-domain superfamily protein [more]
AT3G62190.24.2e-1971.43Chaperone DnaJ-domain superfamily protein [more]
AT3G47940.15.0e-0446.67DNAJ heat shock family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 4..66
e-value: 8.9E-5
score: 31.9
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 11..67
e-value: 7.8E-9
score: 35.5
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 5..81
score: 10.422499
IPR001623DnaJ domainCDDcd06257DnaJcoord: 9..61
e-value: 3.70943E-9
score: 47.9253
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 8..78
e-value: 1.1E-9
score: 40.4
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 9..68
NoneNo IPR availablePANTHERPTHR43948FAMILY NOT NAMEDcoord: 1..79
NoneNo IPR availablePANTHERPTHR43948:SF14OS07G0637100 PROTEINcoord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G006710.1CmaCh18G006710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0061077 chaperone-mediated protein folding
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0051087 chaperone binding
molecular_function GO:0044183 protein folding chaperone
molecular_function GO:0051082 unfolded protein binding