CmaCh18G006710 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAATCTTTTAAGCGGCAGAGTGCTAAGATTGATAAACGTGGAAGAAGGCGAGACCACGGACAAGGAGATATTGAGAGAGATGCAAGGCGACGAAGCCAGAATCTTGCTCGGATTCTCTCCCGGTTCCCGCCCGTCTCCTTCCCAGGTGCCGTATCAAAACCATATACACATCTCATCTCTCTCAATTTCCTCTAAATCCATTCTTTCTGATCTCCAATCTATGAGCAATATGAATAGATTTTGAAGATGAATCTTCAGCGACGATCTTTGAAGAAGACAATGGCGGATTGTTGCTCCAAGTAGACGGATGTTTGGTTAGGGTTTATACGTAATTGAGCAATGTGTGTGTTAACGTTCTTGTTCTTCATCGCAGGTAAAAGAAGCTTACAAAAGGAAGGTATGGGATTCTCATCCTGACCTGTTCCCTGCTCATCAAAAGTCTCAGGCCGAATCCAAATTCAAACTGGTAAGGAATAAGGAACGCGTTTCCATTGAAGCCGCGACTATATAATGCGTTCATTTCATGAATCCAAGAATTTGATATATCATCTGCTGCAGATTTCCGAAGCTTATTCATTCCTGTTATCTGGTAATTCTCATGTATTCACAGCTGATCCGATAGATCACCAAAAACGAATTCAATTGCTTCCACGTTTGATTATAGCCTAAACGAAATCTTTGCAGGTGCCCGAAGAGGAGATTCACATTCAAGTAAACATATCATGGCTTTGTTAGTTCATTCTGGGATACGATTTGATGAGCCAACTATGAACAGCTTCATATGAACGGGTTGTAAGAAGGGGGGTTCCGGTCTCGCAAGGAGGGAGAAGAAATCATGCCTTGATCAAGCTTCCCTTCCTGTTACTGATTCTGGGGACTGTTTCACTTGGAGGATTGAATGTTTCCCGGTGAGTTCGAAGCATCAAAACGTTATGAATTGTTCAAAAAAATCCACCATTTTCAAGAAGTTGCTTGCTTTACTTCATTTTTTCAGGGCTTACAAAAAGCAGAAGGAAGCATATCCTTCTCACAATCCTTTTCTTCCTTGAGGCCAGGAAGAATTATGCCAAAAACTAGAGTGTTCTATGTTTAGTTTTGTGATTAGTTTATTTGCAAGAATAAATGTTAAAGGATAGGAAAATTAACAAGCGGATACATGATAGGTGCAAGGGGAAAGAGTGTACATTTGTTATTCTAATTTCAAGTCAAAATTGGTATGCCACAGAGTATTGCTCTGTTAGCGCCTTATATACAACCCGAACACGGGTTAAATTGATTGATTTTATTGTTCGA CCAATCTTTTAAGCGGCAGAGTGCTAAGATTGATAAACGTGGAAGAAGGCGAGACCACGGACAAGGAGATATTGAGAGAGATGCAAGGCGACGAAGCCAGAATCTTGCTCGGATTCTCTCCCGGTTCCCGCCCGTCTCCTTCCCAGGTAAAAGAAGCTTACAAAAGGAAGGTATGGGATTCTCATCCTGACCTGTTCCCTGCTCATCAAAAGTCTCAGGCCGAATCCAAATTCAAACTGATTTCCGAAGCTTATTCATTCCTGTTATCTGGTGCCCGAAGAGGAGATTCACATTCAAGTAAACATATCATGGCTTTGTTAGGGGGTTCCGGTCTCGCAAGGAGGGAGAAGAAATCATGCCTTGATCAAGCTTCCCTTCCTGTTACTGATTCTGGGGACTGTTTCACTTGGAGGATTGAATGTTTCCCGGGCTTACAAAAAGCAGAAGGAAGCATATCCTTCTCACAATCCTTTTCTTCCTTGAGGCCAGGAAGAATTATGCCAAAAACTAGAGTGTTCTATGTTTAGTTTTGTGATTAGTTTATTTGCAAGAATAAATGTTAAAGGATAGGAAAATTAACAAGCGGATACATGATAGGTGCAAGGGGAAAGAGTGTACATTTGTTATTCTAATTTCAAGTCAAAATTGGTATGCCACAGAGTATTGCTCTGTTAGCGCCTTATATACAACCCGAACACGGGTTAAATTGATTGATTTTATTGTTCGA ATGCAAGGCGACGAAGCCAGAATCTTGCTCGGATTCTCTCCCGGTTCCCGCCCGTCTCCTTCCCAGGTAAAAGAAGCTTACAAAAGGAAGGTATGGGATTCTCATCCTGACCTGTTCCCTGCTCATCAAAAGTCTCAGGCCGAATCCAAATTCAAACTGATTTCCGAAGCTTATTCATTCCTGTTATCTGGTGCCCGAAGAGGAGATTCACATTCAAGTAAACATATCATGGCTTTGTTAGGGGGTTCCGGTCTCGCAAGGAGGGAGAAGAAATCATGCCTTGATCAAGCTTCCCTTCCTGTTACTGATTCTGGGGACTGTTTCACTTGGAGGATTGAATGTTTCCCGGGCTTACAAAAAGCAGAAGGAAGCATATCCTTCTCACAATCCTTTTCTTCCTTGAGGCCAGGAAGAATTATGCCAAAAACTAGAGTGTTCTATGTTTAG MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLISEAYSFLLSGARRGDSHSSKHIMALLGGSGLARREKKSCLDQASLPVTDSGDCFTWRIECFPGLQKAEGSISFSQSFSSLRPGRIMPKTRVFYV Homology
BLAST of CmaCh18G006710 vs. ExPASy Swiss-Prot
Match: Q2GLU9 (Chaperone protein DnaJ OS=Anaplasma phagocytophilum (strain HZ) OX=212042 GN=dnaJ PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 9.8e-05 Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A6J1HU66 (uncharacterized protein LOC111466618 OS=Cucurbita maxima OX=3661 GN=LOC111466618 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32 Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A6J1G0D6 (uncharacterized protein LOC111449543 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449543 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 3.3e-32 Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0
BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A0A0KRW5 (Heat shock protein DnaJ, N-terminal OS=Cucumis sativus OX=3659 GN=Csa_5G585980 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27 Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A5D3CW64 (Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002760 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 4.2e-27 Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of CmaCh18G006710 vs. ExPASy TrEMBL
Match: A0A6J1G098 (uncharacterized protein LOC111449543 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449543 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 4.2e-27 Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of CmaCh18G006710 vs. NCBI nr
Match: XP_022967118.1 (uncharacterized protein LOC111466618 [Cucurbita maxima]) HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32 Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of CmaCh18G006710 vs. NCBI nr
Match: XP_023541159.1 (uncharacterized protein LOC111801402 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32 Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of CmaCh18G006710 vs. NCBI nr
Match: KAG6573609.1 (hypothetical protein SDJN03_27496, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32 Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of CmaCh18G006710 vs. NCBI nr
Match: XP_022945242.1 (uncharacterized protein LOC111449543 isoform X1 [Cucurbita moschata]) HSP 1 Score: 147.9 bits (372), Expect = 6.9e-32 Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0
BLAST of CmaCh18G006710 vs. NCBI nr
Match: XP_004135355.1 (uncharacterized protein LOC101221514 [Cucumis sativus] >KGN51624.1 hypothetical protein Csa_009442 [Cucumis sativus]) HSP 1 Score: 132.5 bits (332), Expect = 3.0e-27 Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of CmaCh18G006710 vs. TAIR 10
Match: AT3G62190.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 95.5 bits (236), Expect = 3.8e-20 Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of CmaCh18G006710 vs. TAIR 10
Match: AT3G62190.2 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 92.0 bits (227), Expect = 4.2e-19 Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of CmaCh18G006710 vs. TAIR 10
Match: AT3G47940.1 (DNAJ heat shock family protein ) HSP 1 Score: 42.0 bits (97), Expect = 5.0e-04 Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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