CmaCh18G006260 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G006260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ras-related protein Rab-2A
Location	Cma_Chr18: 5550440 .. 5554117 (-)
RNA-Seq Expression	CmaCh18G006260
Synteny	CmaCh18G006260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCGAACCATAGATCAAGTGGTTCATAAAGTCTCTATATTTATAGGATTTGCCAGCTCGAAGTCAGACATCGTAATTCCATTCCAACACGCAGAGGCGTCCCTTCGCTTTGCCTCGCTTCGTTGGAGCTTCTCAATTGAAACTCCTTCTTTACGGTTTCTCTCTACGTTTCCCCCTTTTTCTTCCGCCGATTCGCCATTCCGGACCAATTCTCTTCTATACACTCGATTCCTCTCGCGGCGGCTTGTGTTTTGCTCTTCGAATTCAATCGGAATGTCATACGCCTACCTTTTCAAGTACATCATTATTGGTGATACTGGTACGCCTTTGTATCTATCTTGTTTTCGTTTTGGATCTGGTTTCTGAATTAGGTCGATTTGATTATGTGTTGATTTGTGCTTAATCTACGTGATTGATCTGTCTGTCTGATTTGTGGATCTCAACGCTTCTTTTTAATTTGAGAATTTTCTTGCGATTGAGGGGTTTCTTGCGACTTTTGATTGTGCATATTCTTCAGGAGTTGGAAAATCATGTCTTCTTCTCCAATTTACCGATAAGCGCTTCCAGCCTGTTCATGACTTGACTATTGGTGTCGAGTTTGGTGCTAGGATGATCACCATTGACAGCAAGCCAATCAAGTTGCAAATATGGGATACGGTTAGCTATCTCTCTTTCATCTCTTCATTTTCTTTTATTGAACTGAATGAGTTCTATTCTGGTTTATGAATTGGTACGTTACCTAATCTAGGATCCATCTAAGGGTAAATCATCCGAAATTATACCAGAGACGAGTAGGTGATCTTCTGCTATAAGCTTAAATCTTAGTTCAAATAAAATGCACAAACAAGAACTTGTAGTAAAACCAGGCAATCTCCATTCATGCTACTATATAGAGTTCATACTATCTATGAGACTTATATTGATGTTTAGAGAGATAGATTATCATTGTAACATGGCTTCGAATCTACAAACTTAGAGCATACTTGTTTTACAGATTAAATGCCATTATTCAAACTTACTATCTGCTTTGTGAGTAATGATGATCCTTATTGTTGTATTGCTTATTTCTATTACACATAATACAATCGTGGTACAGATATTGGTCCCATGTACTTTCTATTTAGATTTGTTCTTTTTGTATCATATAAATTTCAGTAAGAATTTTCCAACTATGAAGTTTCCCAAAAATTTTACAGGCTGGTCAAGAATCCTTCAGGTCTATTACAAGGTCCTATTATAGAGGGGCTGCCGGTGCATTGCTTGTCTATGACATTACCAGGTCTTGCTTCCTCTTTGTTCCTTCCTAAATTAATACTACTTTCGAGTTTTGATGTAGGGATATTTCTGTACTTTAGTGATTTGTGTTTGTTGCCTTCTGTAGCCGTTGGGTTGTGAACCGTGAGTATGTTAACTTTCACAGTTCGTTATTTATCTTTTCCGGGGGGACCTAATATTCAATGTTTTAAAAGTCATCTTGAAGTTGCAATATAATTCGTGTTGGGAGTGAGAGTTCGTTAAAATTCCTCAGTCACAGGAAACTTAGTACTTCATGCAAGTAACAAGAGTTTTCCAGAGAGGTTATTGGTTGATGGAGCTGACCAATGTGTTAGTCGAATGCTTTTCGCTGTAGATTATTAGTTGTGGTTTGTTTTTGTGAGATCTCACATCGGTTTGGGAGGAGAATGAAGCATTCTTTAGAAGTATGTGGAAACTTCTCCCTATCAGACGCATTTTAAAAACCTTGAGTGGAGGCTTGAAAGGAAAAGCCCAAAGAAGACTATCTACTAGCAGTGGACTTAGACCGTTATAAATGATATTAGAGCCAGACACCGTATGTGCCAGTGAGAAGGCTGAGCCCCAAAGGGGGAGGACACGAGACGGTGTGCCAGCAAGGTCGTTGGGCCCCAAAGGGGGTAGATTTGGGGGTCCTGCATCGATTGGAGAAGGAAACGAGTGTCAGCGAGGATTCTGGGCTCCGAGGATGGTGGATTGTGAGATCCCCACATCGGTTGGGAAGGAGAATGAAGCATTCTTTATAAGGGTGTAGAAACCTCTCCCTATCAGATACATTTTAAAAACCTTGAGAGGAAACTCAAAAGGGAAAGCCTAAAAAGGACAATATCTGCTAGCGGTAGGCTTGGGCTATTATAGTTTTTGTCTTGTATAGTTGTTGGTTTTGTGAATAACATCAGCAAGACCATAATTGTTAAAATAATACAGTCACTCAAAGTTTGGTGTGATTCATTCTACCTTCTAATTTAATTTGATATACTGTGTAAGCTGTAATGGGGCCTCATACTTTAAATTTATAGAACCAATGAGGATCTCAGACTGAAGGTTATGTGGCTATCATATTTTTCAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGCAACAAGTGTGATCTTGCGCACAGAAGGGCTGTCAGCACCGAGGAAGGAGAGCAGTTTGCAAAGGAGCACGGTTTAATCTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGTGATAGAATATGACGTGTAGATTTATAATATTCAATTTTTTTATCTCACAATTCTCCTGATGACCAATCATTTTTAACAGGCATTCATAAAAACTGCTGCGACCATTTATAAGAAGATCCAGGAGGGAGTATTTGATGTATCTAATGAGGTATGCAGTCTGCCTTAACTTATTGCTAACTGTTTGGTTTTACCTTCGTCGTGGTGGCTTTGCATAAGAGTCCAATTCCACCGCTAGTAGATATTGTTATCTTTGGGCTTTCCCTTTCGGGCTTTCGAGTTTTCCTCTCAAGGCTTTTAAAGCGTGTCGGCTAGGGAGGGGTTTTCACACCCTTAATAAATGGTGTTTCATTCTCCTCCTCAACCCGTGGGCTCCCTTCGGGGCTCAGCCTCCTCGGCACATCGCCTGGTGCCTATCTCTGATTTCATTTGTAACAGCCAAAACCCACTCCTAGTAAATATTGTCCTTATTTGGGTTTTCCCTTCTGGGTTTCCCTTCAAGGTTTTTAAACCGCGTCTGCTAGGGAGCGGTTTCCACTTCTTTAATAAAGGATATTTCTTCTTCCTCCTCAACCGATGTGGGAAAGCTTATCATGGATGAATATGATGAGAATGATGTTGTAATTGATGCTATGTTCCATCTGATATGCTGCAGTCATATGGGATAAAGGTTGGGTATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGCACTATAGCTCAATCTGGGGGTTGTTGCAGTTAAACATCTTGCTGCTCAATCTAGTACAAACTTCGACGATGTCTTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAATCCATCAGAAAAAGAACAAAACAGAAAAAAAGAAACCCATAATAGGTTATCATCAGGTACTTGTATAATCATTTGATGTGTCATGTTTTTTTTCTTCTTTTCAATAAGCTAATTATGTCTTCATCGTATTTGATTGTAAAGGTAAATTCATATTAATGCATGTTATTTGTGACAGAACTGCCTCCTACTTTGTTTTATTGGTCAGTGCTTTAAGTACGGACTTTCTTTGAACAACTTTGAAGAATATGATGTTTTTAATTTTAAACTTTTATTTATTTTATTTAA

mRNA sequence

ATGGTTCGAACCATAGATCAAGTGGTTCATAAAGTCTCTATATTTATAGGATTTGCCAGCTCGAAGTCAGACATCGTAATTCCATTCCAACACGCAGAGGCGTCCCTTCGCTTTGCCTCGCTTCGTTGGAGCTTCTCAATTGAAACTCCTTCTTTACGGTTTCTCTCTACGTTTCCCCCTTTTTCTTCCGCCGATTCGCCATTCCGGACCAATTCTCTTCTATACACTCGATTCCTCTCGCGGCGGCTTGTGTTTTGCTCTTCGAATTCAATCGGAATGTCATACGCCTACCTTTTCAAGTACATCATTATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAATTTACCGATAAGCGCTTCCAGCCTGTTCATGACTTGACTATTGGTGTCGAGTTTGGTGCTAGGATGATCACCATTGACAGCAAGCCAATCAAGTTGCAAATATGGGATACGGCTGGTCAAGAATCCTTCAGGTCTATTACAAGGTCCTATTATAGAGGGGCTGCCGGTGCATTGCTTGTCTATGACATTACCAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGCAACAAGTGTGATCTTGCGCACAGAAGGGCTGTCAGCACCGAGGAAGGAGAGCAGTTTGCAAAGGAGCACGGTTTAATCTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATAAAAACTGCTGCGACCATTTATAAGAAGATCCAGGAGGGAGTATTTGATGTATCTAATGAGTCATATGGGATAAAGGTTGGGTATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGCACTATAGCTCAATCTGGGGGTTGTTGCAGTTAAACATCTTGCTGCTCAATCTAGTACAAACTTCGACGATGTCTTCTTTAAATTCCTTTGTTAATTATGAGTGTCAGAATCCATCAGAAAAAGAACAAAACAGAAAAAAAGAAACCCATAATAGGTTATCATCAGGTACTTGTATAATCATTTGATGTGTCATGTTTTTTTTCTTCTTTTCAATAAGCTAATTATGTCTTCATCGTATTTGATTGTAAAGGTAAATTCATATTAATGCATGTTATTTGTGACAGAACTGCCTCCTACTTTGTTTTATTGGTCAGTGCTTTAAGTACGGACTTTCTTTGAACAACTTTGAAGAATATGATGTTTTTAATTTTAAACTTTTATTTATTTTATTTAA

Coding sequence (CDS)

ATGGTTCGAACCATAGATCAAGTGGTTCATAAAGTCTCTATATTTATAGGATTTGCCAGCTCGAAGTCAGACATCGTAATTCCATTCCAACACGCAGAGGCGTCCCTTCGCTTTGCCTCGCTTCGTTGGAGCTTCTCAATTGAAACTCCTTCTTTACGGTTTCTCTCTACGTTTCCCCCTTTTTCTTCCGCCGATTCGCCATTCCGGACCAATTCTCTTCTATACACTCGATTCCTCTCGCGGCGGCTTGTGTTTTGCTCTTCGAATTCAATCGGAATGTCATACGCCTACCTTTTCAAGTACATCATTATTGGTGATACTGGAGTTGGAAAATCATGTCTTCTTCTCCAATTTACCGATAAGCGCTTCCAGCCTGTTCATGACTTGACTATTGGTGTCGAGTTTGGTGCTAGGATGATCACCATTGACAGCAAGCCAATCAAGTTGCAAATATGGGATACGGCTGGTCAAGAATCCTTCAGGTCTATTACAAGGTCCTATTATAGAGGGGCTGCCGGTGCATTGCTTGTCTATGACATTACCAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCAAACATGACAATAATGCTGATTGGCAACAAGTGTGATCTTGCGCACAGAAGGGCTGTCAGCACCGAGGAAGGAGAGCAGTTTGCAAAGGAGCACGGTTTAATCTTTATGGAGGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATAAAAACTGCTGCGACCATTTATAAGAAGATCCAGGAGGGAGTATTTGATGTATCTAATGAGTCATATGGGATAAAGGTTGGGTATGGTGGAATCCCAGGGCCATCAGGAGGCAGAGATGGCACTATAGCTCAATCTGGGGGTTGTTGCAGTTAA

Protein sequence

MVRTIDQVVHKVSIFIGFASSKSDIVIPFQHAEASLRFASLRWSFSIETPSLRFLSTFPPFSSADSPFRTNSLLYTRFLSRRLVFCSSNSIGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS

Homology

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BLAST of CmaCh18G006260 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 6.2e-115
Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCC 303
           ESYGIKVGYGGIPGPSGGRDG+ +Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of CmaCh18G006260 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.8e-107
Identity = 193/211 (91.47%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQ+GVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
           ESYGIKVGY  IPG SGG   + +Q GGCCS
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCCS 210

[Close]

BLAST of CmaCh18G006260 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 385.6 bits (989), Expect = 5.3e-106
Identity = 193/211 (91.47%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQ+GVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
           ESYGIKVGY  +PG SGG  G+ +Q GGCCS
Sbjct: 181 ESYGIKVGY-VVPGQSGGA-GSSSQGGGCCS 209

[Close]

BLAST of CmaCh18G006260 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 3.2e-103
Identity = 182/210 (86.67%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQ+GVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCC 303
           ES GIK+GYG   G +GGRDGTI+Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of CmaCh18G006260 vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.7e-99
Identity = 183/213 (85.92%), Postives = 190/213 (89.20%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA  IYKKIQ+GVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 273 ESYGIKVGYG-GIPGPSGGR--DGTIAQSGGCC 303
           ESYGIKVGYG G  GP   +  +G   +S  CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

[Close]

BLAST of CmaCh18G006260 vs. ExPASy TrEMBL
Match: A0A6J1HR35 (ras-related protein RABB1c OS=Cucurbita maxima OX=3661 GN=LOC111466601 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.2e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
           ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 211

[Close]

BLAST of CmaCh18G006260 vs. ExPASy TrEMBL
Match: A0A6J1IC90 (ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111471671 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.9e-115
Identity = 215/240 (89.58%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 63  SADSPFRTNSLLYTRFLSRRLVFCSSNSIGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKR 122
           S +     NS     FLS  + F SS   GMSYAYLFKYIIIGDTGVGKSCLLLQFTDKR
Sbjct: 10  SGEQSLYINSNWQLNFLSPPISFSSSFPTGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKR 69

Query: 123 FQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR 182
           FQPVHDLTIGVEFGARMITI SKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR
Sbjct: 70  FQPVHDLTIGVEFGARMITIHSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR 129

Query: 183 RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 242
           RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA
Sbjct: 130 RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 189

Query: 243 KTAQNVEEAFIKTAATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGTIAQSGGCC 302
           KTAQNVEEAFI+TAATIYKKIQ+GVFDVSNESYGIKVGYGGIPGPSG RDGT AQSGGCC
Sbjct: 190 KTAQNVEEAFIQTAATIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGSRDGTTAQSGGCC 249

[Close]

BLAST of CmaCh18G006260 vs. ExPASy TrEMBL
Match: A0A6J1G276 (ras-related protein RABB1c OS=Cucurbita moschata OX=3662 GN=LOC111450011 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 8.4e-115
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
           ESYGIKVGYGGIPGPSGGRDG IAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 211

[Close]

BLAST of CmaCh18G006260 vs. ExPASy TrEMBL
Match: A0A6J1EL97 (ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.5e-114
Identity = 215/241 (89.21%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 63  SADSPFRTNSLLYTRFLSRRL-VFCSSNSIGMSYAYLFKYIIIGDTGVGKSCLLLQFTDK 122
           S +     NS     FLS  +  F   +  GMSYAYLFKYIIIGDTGVGKSCLLLQFTDK
Sbjct: 10  SGEQSLYINSNWQLNFLSPPISFFFFISGTGMSYAYLFKYIIIGDTGVGKSCLLLQFTDK 69

Query: 123 RFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDIT 182
           RFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDIT
Sbjct: 70  RFQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDIT 129

Query: 183 RRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 242
           RRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS
Sbjct: 130 RRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 189

Query: 243 AKTAQNVEEAFIKTAATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGTIAQSGGC 302
           AKTAQNVEEAFI+TAATIYKKIQ+GVFDVSNESYGIKVGYGGIPGPSGGRDGT AQSGGC
Sbjct: 190 AKTAQNVEEAFIQTAATIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGTTAQSGGC 249

[Close]

BLAST of CmaCh18G006260 vs. ExPASy TrEMBL
Match: A0A6J1CNK8 (ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.5e-114
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
           ESYGIKVGYGGIPGPSGGRDGT AQ+GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTSAQAGGCCS 211

[Close]

BLAST of CmaCh18G006260 vs. NCBI nr
Match: KAG6573570.1 (Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.1 bits (1411), Expect = 4.7e-152
Identity = 278/288 (96.53%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 16  IGFASSKSDIVIPFQHAEASLRFASLRWSFSIETPSLRFLSTFPPFSSADSPFRTNSLLY 75
           +GFASSKSDIVIPFQHAEASL  ASLRWSF+IETP LRFLSTFPPFSSADSPF+TNSLLY
Sbjct: 1   MGFASSKSDIVIPFQHAEASLCLASLRWSFAIETP-LRFLSTFPPFSSADSPFQTNSLLY 60

Query: 76  TRFLSRRLVFCSSNSIGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEF 135
           TRFLSRR VFCSS S GMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEF
Sbjct: 61  TRFLSRRFVFCSSISTGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEF 120

Query: 136 GARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED 195
           GARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED
Sbjct: 121 GARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLED 180

Query: 196 ARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKT 255
           ARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKT
Sbjct: 181 ARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKT 240

Query: 256 AATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
           AATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDG IAQSGGCCS
Sbjct: 241 AATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 287

[Close]

BLAST of CmaCh18G006260 vs. NCBI nr
Match: KAG7012667.1 (Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 532.7 bits (1371), Expect = 2.0e-147
Identity = 270/279 (96.77%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 25  IVIPFQHAEASLRFASLRWSFSIETPSLRFLSTFPPFSSADSPFRTNSLLYTRFLSRRLV 84
           IVIPFQHAEASL  ASLRWSF+IETP LRFLSTFPPFSSADSPF+TNSLLYTRFLSRR V
Sbjct: 1   IVIPFQHAEASLCLASLRWSFAIETP-LRFLSTFPPFSSADSPFQTNSLLYTRFLSRRFV 60

Query: 85  FCSSNSIGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDS 144
           FCSS S GMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDS
Sbjct: 61  FCSSISTGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDS 120

Query: 145 KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM 204
           KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM
Sbjct: 121 KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANM 180

Query: 205 TIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ 264
           TIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ
Sbjct: 181 TIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ 240

Query: 265 EGVFDVSNESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
           EGVFDVSNESYGIKVGYGGIPGPSGGRDG IAQSGGCCS
Sbjct: 241 EGVFDVSNESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 278

[Close]

BLAST of CmaCh18G006260 vs. NCBI nr
Match: XP_022967096.1 (ras-related protein RABB1c [Cucurbita maxima])

HSP 1 Score: 425.2 bits (1092), Expect = 4.6e-115
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
           ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 211

[Close]

BLAST of CmaCh18G006260 vs. NCBI nr
Match: XP_022973163.1 (ras-related protein RABB1c-like [Cucurbita maxima])

HSP 1 Score: 424.1 bits (1089), Expect = 1.0e-114
Identity = 215/240 (89.58%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 63  SADSPFRTNSLLYTRFLSRRLVFCSSNSIGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKR 122
           S +     NS     FLS  + F SS   GMSYAYLFKYIIIGDTGVGKSCLLLQFTDKR
Sbjct: 10  SGEQSLYINSNWQLNFLSPPISFSSSFPTGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKR 69

Query: 123 FQPVHDLTIGVEFGARMITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR 182
           FQPVHDLTIGVEFGARMITI SKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR
Sbjct: 70  FQPVHDLTIGVEFGARMITIHSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR 129

Query: 183 RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 242
           RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA
Sbjct: 130 RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 189

Query: 243 KTAQNVEEAFIKTAATIYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGTIAQSGGCC 302
           KTAQNVEEAFI+TAATIYKKIQ+GVFDVSNESYGIKVGYGGIPGPSG RDGT AQSGGCC
Sbjct: 190 KTAQNVEEAFIQTAATIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGSRDGTTAQSGGCC 249

[Close]

BLAST of CmaCh18G006260 vs. NCBI nr
Match: XP_022945907.1 (ras-related protein RABB1c [Cucurbita moschata] >XP_023545172.1 ras-related protein RABB1c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.3 bits (1087), Expect = 1.7e-114
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
           ESYGIKVGYGGIPGPSGGRDG IAQSGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGNIAQSGGCCS 211

[Close]

BLAST of CmaCh18G006260 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 415.2 bits (1066), Expect = 4.4e-116
Identity = 204/210 (97.14%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQ+GVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCC 303
           ESYGIKVGYGGIPGPSGGRDG+ +Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of CmaCh18G006260 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 376.3 bits (965), Expect = 2.3e-104
Identity = 182/210 (86.67%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQ+GVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQSGGCC 303
           ES GIK+GYG   G +GGRDGTI+Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of CmaCh18G006260 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 330.1 bits (845), Expect = 1.9e-90
Identity = 166/211 (78.67%), Postives = 182/211 (86.26%), Query Frame = 0


Query: 93  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIW 152
           MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITID+KPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 153 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 212
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 213 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSN 272
           CDL  +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TAATIYK+IQ+GV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 273 ESYGIKVGYGGIPGPSGGRDGTIAQS-GGCC 303
           E        G  PGP GG+D + +Q   GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204

[Close]

BLAST of CmaCh18G006260 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 283.9 bits (725), Expect = 1.5e-76
Identity = 137/164 (83.54%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 139 MITIDSKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 198
           M+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 199 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAAT 258
           HAN NM+IMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA 
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 259 IYKKIQEGVFDVSNESYGIKVGYGGIPGPSGGRDGTIAQSGGCC 303
           I + IQ+GVFDVSNES GIK+GYG   G +GGRDGTI+Q GGCC
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 164

[Close]

BLAST of CmaCh18G006260 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 195.7 bits (496), Expect = 5.5e-50
Identity = 99/209 (47.37%), Postives = 133/209 (63.64%), Query Frame = 0


Query: 95  YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKPIKLQIWDT 154
           Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D K IK QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69

Query: 155 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 214
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++ +WL++ R H + N+ +ML+GNK D
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129

Query: 215 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQEGVFDVSNES 274
           L H  AV TE+ + FA++  L FME SA  A NVE AF +    I+  + +   + ++ES
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189

Query: 275 YGIKVGYGGIPGPSGGRDGTIAQSGGCCS 304
             +      I     G+D +  + GGCCS
Sbjct: 190 ANVPSKGDKI---DIGKDVSAVKKGGCCS 215

The following BLAST results are available for this feature:

BLAST of CmaCh18G006260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92963	6.2e-115	97.14	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	4.8e-107	91.47	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	5.3e-106	91.47	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
Q38922	3.2e-103	86.67	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
P36863	3.7e-99	85.92	GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1	[more]

BLAST of CmaCh18G006260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HR35	2.2e-115	100.00	ras-related protein RABB1c OS=Cucurbita maxima OX=3661 GN=LOC111466601 PE=4 SV=1	[more]
A0A6J1IC90	4.9e-115	89.58	ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111471671 PE=4...	[more]
A0A6J1G276	8.4e-115	99.53	ras-related protein RABB1c OS=Cucurbita moschata OX=3662 GN=LOC111450011 PE=4 SV...	[more]
A0A6J1EL97	2.5e-114	89.21	ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111434331 PE...	[more]
A0A6J1CNK8	5.5e-114	98.58	ras-related protein RABB1c OS=Momordica charantia OX=3673 GN=LOC111012746 PE=4 S...	[more]

BLAST of CmaCh18G006260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573570.1	4.7e-152	96.53	Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7012667.1	2.0e-147	96.77	Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022967096.1	4.6e-115	100.00	ras-related protein RABB1c [Cucurbita maxima]	[more]
XP_022973163.1	1.0e-114	89.58	ras-related protein RABB1c-like [Cucurbita maxima]	[more]
XP_022945907.1	1.7e-114	99.53	ras-related protein RABB1c [Cucurbita moschata] >XP_023545172.1 ras-related prot...	[more]

BLAST of CmaCh18G006260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17170.1	4.4e-116	97.14	RAB GTPase homolog B1C	[more]
AT4G35860.1	2.3e-104	86.67	GTP-binding 2	[more]
AT4G17160.1	1.9e-90	78.67	RAB GTPase homolog B1A	[more]
AT4G35860.2	1.5e-76	83.54	GTP-binding 2	[more]
AT5G45750.1	5.5e-50	47.37	RAB GTPase homolog A1C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 99..120 score: 51.86 coord: 122..138 score: 32.76 coord: 202..215 score: 49.81 coord: 140..162 score: 53.4 coord: 237..259 score: 44.01
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 104..303 e-value: 4.2E-5 score: 23.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 96..262 e-value: 1.9E-37 score: 140.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 99..262 e-value: 5.4E-106 score: 368.1
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 93..303
None	No IPR available	PANTHER	PTHR47979:SF64	SUBFAMILY NOT NAMED	coord: 93..303
None	No IPR available	PROSITE	PS51420	RHO	coord: 46..260 score: 9.509729
None	No IPR available	PROSITE	PS51419	RAB	coord: 94..302 score: 36.093868
None	No IPR available	CDD	cd01866	Rab2	coord: 95..262 e-value: 5.96098E-131 score: 367.133
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 101..262 e-value: 7.7E-12 score: 31.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 100..260 e-value: 2.6E-62 score: 209.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 88..296 score: 19.701426
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 99..252 e-value: 1.7E-32 score: 110.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 91..275 e-value: 6.5E-71 score: 239.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 94..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G006260.1	CmaCh18G006260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding