CmaCh18G006030 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G006030
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Glucan endo-1,3-beta-glucosidase
Location	Cma_Chr18: 5363462 .. 5365099 (+)
RNA-Seq Expression	CmaCh18G006030
Synteny	CmaCh18G006030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACAAAACACTACAATGTCTTCTCGTTCTACTCGGCTCACCATTCTCCATCTGTCTGTGCTGCTCGCTTTCCTCGTAGCTCCACGAAGATCAGGTACTTAGCTTCTTGTTTGTCTTGTTTTTATTAGGAATCACAACTCTCCACAACGGTATGGTGTTGTCCACTTTGAGTATAAGTTCTCGTGGCTTTGTTTTGGTCTGGGCTTCTCCAAAAAGCCTCATACTAATGGAGAGTATTTCTTGACCGTCTTTTTGTTATGAAAGAAAAATGGGTTCGATTTTTTTTTTTTCTTTCCTGTGTTGGGTTATGAAAGAGGGGCAATTTGAGGAGTGGTGCATAGCTGATGAGCAAGTGCCGGATGATGAGCTGCAAAGAGCTCTTGATTGGGCTTGTGGGAAAGGAGGAGCGAATTGTGGTGATATTCAAGTGAAGCGTCCTTGTTTTTACCCAGACACTGTTAGGGATCATGCTTCTTATGCTTTTAATAGTTACTATCAAAAGTTTAAGCATAAGGGTGCCTCTTGCTTCTTCAATTCGGCTGCCATGGTCACCGCTCTCGATCCTAGTAAGTGTTCTTAATCTAACCCCATCTTCTTGATCTTCTCGTCTTGTACTTCATGGTTACTATATAGTTTTTGTAATGGTACAAGCTCATCGCTAGTAGATATTGTTCTTTTTGAGCTTTTCTGTATAGTTTTTGTAACAGTACAAGCTCATCGTTAGTAGATATTTTTCTCTTTGAGCTTTCCTGTATTGTTTTTGTAACAGTACAAGCTCATCGCTAGTAGATATTTTTCTCTTTGGGGTTTTCTTTTCGGGTTTTCTCTCAGGTTTTTAAAATGTGTCTACTAGGGAGAGGTTTCCACATCTTTATAGAGAATGTTTCATTCTTCTCCTCAACTAATGTGGGATCTTGCAATCTCCTACGATGTGGGATCTCACAATCCACCATCGAGAGGTTTCTACACCCTTGTAAAAAATATTTTGCTCCCCTCTTGAATTGACGTGTGATCTCACAATCCAATCCTCAGAGGTTTCCACACCCTTATAAAAAATGATTAGTTCCCCTCTTCAACTGATGTCGAATCTCACAATCCATCCTAACAGGTTTTTACACTCTTATAAAGAATATTTCATTCCTCTCTCCAATTGACGTGGGATCTCCTAATCTACCCTCGAGAAGTTTCCACACCCTTATAAAAAATGTTTCGTTCCCCCTCTCCAACCGATGTGGGATCTCACATTTCACCCCCTTCAAAGTCCAGAGTTCTCGTTGAAACTCGTTCCTTTTTCCAATCAACGTGGACCTCGCCGTTTTCTTGGTCAACTTGCTTATACATTTTCCTTAAAACTAATCTTCCTTTCCTTGGCAGGTCATGGTTCATGCAAGTTTGAGTATGTACCTTGAAGAAGGGCATGGCTTAGTCATCAAAGAGGCTTCCTAACTTTGAGTATTCAACCGTTTTTTATATGGATCAAGATATCTCAATCATATAATATGAACTACGAAGAAAATAAGTTTTACTTATTTTTAGATGGTTACAAATTTTGAGTGAATGATAGTTTAGAATTATGGTGTTTCGTTACGGTGTTTTATGACTTTTTTGTTACTTGATTTGCAAAAATTCAAGTGTAC

mRNA sequence

AGAACAAAACACTACAATGTCTTCTCGTTCTACTCGGCTCACCATTCTCCATCTGTCTGTGCTGCTCGCTTTCCTCGTAGCTCCACGAAGATCAGAGGGGCAATTTGAGGAGTGGTGCATAGCTGATGAGCAAGTGCCGGATGATGAGCTGCAAAGAGCTCTTGATTGGGCTTGTGGGAAAGGAGGAGCGAATTGTGGTGATATTCAAGTGAAGCGTCCTTGTTTTTACCCAGACACTGTTAGGGATCATGCTTCTTATGCTTTTAATAGTTACTATCAAAAGTTTAAGCATAAGGGTGCCTCTTGCTTCTTCAATTCGGCTGCCATGGTCACCGCTCTCGATCCTAGTCATGGTTCATGCAAGTTTGAGTATGTACCTTGAAGAAGGGCATGGCTTAGTCATCAAAGAGGCTTCCTAACTTTGAGTATTCAACCGTTTTTTATATGGATCAAGATATCTCAATCATATAATATGAACTACGAAGAAAATAAGTTTTACTTATTTTTAGATGGTTACAAATTTTGAGTGAATGATAGTTTAGAATTATGGTGTTTCGTTACGGTGTTTTATGACTTTTTTGTTACTTGATTTGCAAAAATTCAAGTGTAC

Coding sequence (CDS)

ATGTCTTCTCGTTCTACTCGGCTCACCATTCTCCATCTGTCTGTGCTGCTCGCTTTCCTCGTAGCTCCACGAAGATCAGAGGGGCAATTTGAGGAGTGGTGCATAGCTGATGAGCAAGTGCCGGATGATGAGCTGCAAAGAGCTCTTGATTGGGCTTGTGGGAAAGGAGGAGCGAATTGTGGTGATATTCAAGTGAAGCGTCCTTGTTTTTACCCAGACACTGTTAGGGATCATGCTTCTTATGCTTTTAATAGTTACTATCAAAAGTTTAAGCATAAGGGTGCCTCTTGCTTCTTCAATTCGGCTGCCATGGTCACCGCTCTCGATCCTAGTCATGGTTCATGCAAGTTTGAGTATGTACCTTGA

Protein sequence

MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP

Homology

[Close]

BLAST of CmaCh18G006030 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.2e-22
Identity = 46/94 (48.94%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 28  GQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYY 87
           G  ++WCIA  Q    ELQ ALDWACG G  +C  +Q  +PCF PDTV  HASYAFN+YY
Sbjct: 386 GGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYY 445

Query: 88  QKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
           Q+       C FN A++    DPS+G+C +   P
Sbjct: 446 QQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CmaCh18G006030 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 104.8 bits (260), Expect = 7.2e-22
Identity = 53/113 (46.90%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 5   STRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQ 64
           ST + +LH+S    FL     ++   + +CIA + V    LQ ALDWACG G +NC +IQ
Sbjct: 357 STPVYLLHVSGSGTFLA----NDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQ 416

Query: 65  VKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKF 118
               C+ P+ V+ HAS+AFNSYYQK      SC F   AM+T  DPSHGSC F
Sbjct: 417 PGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIF 465

[Close]

BLAST of CmaCh18G006030 vs. ExPASy Swiss-Prot
Match: Q9M2K6 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 5.1e-20
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 7   RLTILHLSVLLAFLVAPRRSEG---QFEEWCIADEQVPDDELQRALDWACGKGGANCGDI 66
           RL+IL  +  +  ++   +  G   Q E WC+A     D  LQ A++WACG+GGA+CG I
Sbjct: 12  RLSILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPI 71

Query: 67  QVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKF 118
           Q   PC  P  V+  AS+ FN+YY K   +  +C FN+ A +T+L+PS G+CK+
Sbjct: 72  QQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 125

[Close]

BLAST of CmaCh18G006030 vs. ExPASy Swiss-Prot
Match: Q94CD8 (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-19
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 33  WCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYYQKFKH 92
           +C+A     DD+L   L+WACG+G ANC  IQ  +PC+ P+ V+ HAS+AFN YYQK K 
Sbjct: 362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKS 421

Query: 93  KGASCFFNSAAMVTALDPSHGSCKF 118
            G +C F+  A+ T  DPS+ +C +
Sbjct: 422 AGGTCDFDGTAITTTRDPSYRTCAY 446

[Close]

BLAST of CmaCh18G006030 vs. ExPASy Swiss-Prot
Match: Q9FJU9 (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-18
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 26  SEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNS 85
           S G    WCIA  +  + +L+ ALDWACG G  +C  IQ  +PCF PDT+  HAS+ FNS
Sbjct: 362 SSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNS 421

Query: 86  YYQKFKHKGASCFFNSAAMVTALDPSHGSC 116
           Y+Q+ +    +C F  A +    DPS+  C
Sbjct: 422 YFQQNRATDVACSFGGAGVKVNKDPSYDKC 451

[Close]

BLAST of CmaCh18G006030 vs. ExPASy TrEMBL
Match: A0A6J1HUR1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC111466373 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-65
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC
Sbjct: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
           GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV
Sbjct: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of CmaCh18G006030 vs. ExPASy TrEMBL
Match: A0A6J1EBZ4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LOC111432636 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63
Identity = 117/121 (96.69%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MSSRSTRLTILHLSVLLAF+VAPRRSEGQ EEWCIADEQVPDDELQRALDWACGKGGA+C
Sbjct: 1   MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADC 60

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
           GDIQVKRPCFYP+TVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV
Sbjct: 61  GDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of CmaCh18G006030 vs. ExPASy TrEMBL
Match: A0A6J1CNC5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Momordica charantia OX=3673 GN=LOC111012685 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 3   SRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGD 62
           S   RL IL LS+LL F++AP+R EGQ EEWCIADEQVPDDELQRALDWACGKGGA+C  
Sbjct: 2   SSPPRLIILQLSLLLLFIIAPQRLEGQLEEWCIADEQVPDDELQRALDWACGKGGADCRK 61

Query: 63  IQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
           IQVK+PCFYP+TVRDHASYAFN+YYQKFKHKGA+C+FNSAAMVTALDPSHGSCKFEYVP
Sbjct: 62  IQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 120

[Close]

BLAST of CmaCh18G006030 vs. ExPASy TrEMBL
Match: A0A0A0LW57 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181450 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 3   SRSTRLTILHLSVLLAFLVAPRRS-EGQF-EEWCIADEQVPDDELQRALDWACGKGGANC 62
           S ST L IL LS LL F++ P  S +  F EEWCIADEQVPDDELQRALDWACGKGGA+C
Sbjct: 2   SSSTHLIILSLSFLLLFIITPTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGADC 61

Query: 63  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 122
            +IQ+K+PCFYP+TVRDHASYAFNSYYQKFKHKGA+C+FNSAAMVT+LDPSHGSCKFEYV
Sbjct: 62  RNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEYV 121

[Close]

BLAST of CmaCh18G006030 vs. ExPASy TrEMBL
Match: A0A1S3CJN7 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucumis melo OX=3656 GN=LOC103501716 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 94/122 (77.05%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRS-EGQFEEWCIADEQVPDDELQRALDWACGKGGAN 60
           MSS +  + IL+LS LL F++ P  S E   EEWCIADEQVPDDELQRALDWACGKGGA+
Sbjct: 5   MSSSTHLIIILYLSFLLLFIITPTISDEWVDEEWCIADEQVPDDELQRALDWACGKGGAD 64

Query: 61  CGDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEY 120
           C +IQ+K+PCFYP+T+RDHASYAFNSYYQKFKHKGA+C+FNSAAMVT+LDPSHGSCKFEY
Sbjct: 65  CTNIQMKQPCFYPNTLRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 124

Query: 121 VP 122
           VP
Sbjct: 125 VP 126

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: XP_022966757.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita maxima] >XP_022966758.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita maxima] >XP_022966759.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 258.5 bits (659), Expect = 3.0e-65
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC
Sbjct: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
           GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV
Sbjct: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: KAG6573531.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253.8 bits (647), Expect = 7.3e-64
Identity = 118/121 (97.52%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MSSRSTRLTILHLSVLLAF+VAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGA+C
Sbjct: 1   MSSRSTRLTILHLSVLLAFIVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGADC 60

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
           GDIQVKRPCFYP+TVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV
Sbjct: 61  GDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: XP_022925351.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 3.6e-63
Identity = 117/121 (96.69%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MSSRSTRLTILHLSVLLAF+VAPRRSEGQ EEWCIADEQVPDDELQRALDWACGKGGA+C
Sbjct: 1   MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADC 60

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
           GDIQVKRPCFYP+TVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV
Sbjct: 61  GDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: XP_023542518.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.6 bits (636), Expect = 1.4e-62
Identity = 116/121 (95.87%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MSSRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANC 60
           MSSRSTRLTILHLSVLLAF+VAPRRSEGQ EEWCIADEQVPDDELQRALDWACGKGGA+C
Sbjct: 1   MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADC 60

Query: 61  GDIQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYV 120
           GDIQVKRPCFYP+TVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTAL+PSHGSCKFEYV
Sbjct: 61  GDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALNPSHGSCKFEYV 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of CmaCh18G006030 vs. NCBI nr
Match: XP_022142612.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Momordica charantia])

HSP 1 Score: 218.0 bits (554), Expect = 4.4e-53
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 3   SRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGD 62
           S   RL IL LS+LL F++AP+R EGQ EEWCIADEQVPDDELQRALDWACGKGGA+C  
Sbjct: 2   SSPPRLIILQLSLLLLFIIAPQRLEGQLEEWCIADEQVPDDELQRALDWACGKGGADCRK 61

Query: 63  IQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
           IQVK+PCFYP+TVRDHASYAFN+YYQKFKHKGA+C+FNSAAMVTALDPSHGSCKFEYVP
Sbjct: 62  IQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 120

[Close]

BLAST of CmaCh18G006030 vs. TAIR 10
Match: AT5G35740.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 3.8e-42
Identity = 75/118 (63.56%), Postives = 94/118 (79.66%), Query Frame = 0


Query: 5   STRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQ 64
           ST L  + L +L+  +  PRRSE + E+WCIADEQ PDDELQ ALDWACGKGGA+C  +Q
Sbjct: 2   STFLIRILLPLLIIAMTLPRRSEAESEQWCIADEQTPDDELQAALDWACGKGGADCSKMQ 61

Query: 65  VK-RPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
            + +PCF P+T+RDHAS+AFNSYYQ +K+KG SC+F  AAM+T LDPSHGSC++EY P
Sbjct: 62  QENQPCFLPNTIRDHASFAFNSYYQTYKNKGGSCYFKGAAMITELDPSHGSCQYEYNP 119

[Close]

BLAST of CmaCh18G006030 vs. TAIR 10
Match: AT2G04910.2 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 9.3e-33
Identity = 55/96 (57.29%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 26  SEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNS 85
           ++ +F +WC+AD Q+PD+ +Q A+DWAC  GGA+C  IQ  +PCF P+TV+DHAS  FN+
Sbjct: 8   AKAEFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNN 67

Query: 86  YYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
           YYQ++K  G SC FNS A +T  DPSH SC FEYVP
Sbjct: 68  YYQRYKRNGGSCNFNSTAFITQTDPSHDSCHFEYVP 103

[Close]

BLAST of CmaCh18G006030 vs. TAIR 10
Match: AT2G04910.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 3.4e-27
Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 26  SEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNS 85
           ++ +F +WC+AD Q+PD+ +Q A+DWAC  GGA+C  IQ  +PCF P+TV+DHAS  FN+
Sbjct: 8   AKAEFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNN 67

Query: 86  YYQKFKHKGASCFFNSAAMVTALDPS 112
           YYQ++K  G SC FNS A +T  DPS
Sbjct: 68  YYQRYKRNGGSCNFNSTAFITQTDPS 93

[Close]

BLAST of CmaCh18G006030 vs. TAIR 10
Match: AT4G29360.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 105.5 bits (262), Expect = 3.0e-23
Identity = 46/94 (48.94%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 28  GQFEEWCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYY 87
           G  ++WCIA  Q    ELQ ALDWACG G  +C  +Q  +PCF PDTV  HASYAFN+YY
Sbjct: 386 GGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYY 445

Query: 88  QKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 122
           Q+       C FN A++    DPS+G+C +   P
Sbjct: 446 QQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of CmaCh18G006030 vs. TAIR 10
Match: AT5G67460.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 105.5 bits (262), Expect = 3.0e-23
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 33  WCIADEQVPDDELQRALDWACGKGGANCGDIQVKRPCFYPDTVRDHASYAFNSYYQKFKH 92
           WC+A   V  + LQ++LD+ACG+GGANC +I+    C+YPDTV  HASYAFNSY+QK K 
Sbjct: 293 WCVAKPSVAAETLQQSLDFACGQGGANCDEIKPHGICYYPDTVMAHASYAFNSYWQKTKR 352

Query: 93  KGASCFFNSAAMVTALDPSHGSCKF 118
            G +C F   AM+   DPS+  C+F
Sbjct: 353 NGGTCSFGGTAMLITTDPSYQHCRF 377

The following BLAST results are available for this feature:

BLAST of CmaCh18G006030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYE5	4.2e-22	48.94	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360...	[more]
O65399	7.2e-22	46.90	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
Q9M2K6	5.1e-20	41.23	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5...	[more]
Q94CD8	1.5e-19	47.06	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 ...	[more]
Q9FJU9	3.7e-18	43.33	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590...	[more]

BLAST of CmaCh18G006030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUR1	1.4e-65	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1EBZ4	1.8e-63	96.69	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1CNC5	2.1e-53	83.19	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A0A0LW57	1.2e-48	79.34	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181450 PE=4 SV=...	[more]
A0A1S3CJN7	1.2e-48	77.05	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucumis melo OX=3656 GN=LOC10350...	[more]

BLAST of CmaCh18G006030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966757.1	3.0e-65	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita maxima] >XP_022966758.1 ...	[more]
KAG6573531.1	7.3e-64	97.52	PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022925351.1	3.6e-63	96.69	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata]	[more]
XP_023542518.1	1.4e-62	95.87	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022142612.1	4.4e-53	83.19	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Momordica charantia]	[more]

BLAST of CmaCh18G006030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35740.1	3.8e-42	63.56	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.2	9.3e-33	57.29	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.1	3.4e-27	54.65	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G29360.1	3.0e-23	48.94	O-Glycosyl hydrolases family 17 protein	[more]
AT5G67460.1	3.0e-23	52.94	O-Glycosyl hydrolases family 17 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 32..117 e-value: 2.0E-45 score: 166.9
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 33..104 e-value: 1.8E-20 score: 73.4
None	No IPR available	GENE3D	1.20.58.1040		coord: 29..119 e-value: 4.7E-10 score: 41.7
None	No IPR available	PANTHER	PTHR31044:SF35	CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN	coord: 10..121
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 10..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G006030.1	CmaCh18G006030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009506	plasmodesma