Homology
BLAST of CmaCh18G004830 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 429.1 bits (1102), Expect = 1.0e-118
Identity = 225/677 (33.23%), Postives = 377/677 (55.69%), Query Frame = 0
Query: 37 LFSRCKSRQQLEQIHARFVLHGFHQNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTL 96
L RC S ++L QI +G +Q KL+ + +G ++ + VF I + L
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 97 YNAILRNLTRFGEYERTLLVYREMVAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLI 156
Y+ +L+ + + ++ L + M + P + ++L+ C + + GK IHG L+
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 157 KLGVDSYDTVVTVLAEMYGKCIDFENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISL 216
K G +T L MY KC A ++FD+M +DL W+++++ QNG
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 217 LLGRMKSEPLVTDSLTFINLLRSISGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYS 276
++ M E L +T +++L ++S L I + K +H A+ S + + TA++ +Y+
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 277 KLGSLVDARKLFEKMPEKDRVVWNIMIAAYAREGRPMECLELFESMARSGIRADLFTALP 336
K GSL AR+LF+ M E++ V WN MI AY + P E + +F+ M G++ + +
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 337 VISSISQLKCADWGKQTHANILRNGSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKT 396
+ + + L + G+ H + G D VSV NSLI MYC+C +++A +F + ++T
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 397 VISWSAMIKGNVKHGYPLIALSLFFMMKSDGIQADFITVINIMPAFVDIGALENVKYLHG 456
++SW+AMI G ++G P+ AL+ F M+S ++ D T ++++ A ++ + K++HG
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 457 YSLKLALTSLPSLNTALLITYAKCGCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDW 516
++ L + TAL+ YAKCG I +A+ +F + ++++ + WN+MI + HG
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF--DMMSERHVTTWNAMIDGYGTHGFG 522
Query: 517 SQCFKLYNQMKCSNSNPDQVTFLGLLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYAC 576
+L+ +M+ P+ VTFL +++AC +SGLVE G + F M E+YS + S +HY
Sbjct: 523 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 582
Query: 577 MVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKN 636
MV+LLGRAG +NEA + + MP+KP V+G +L AC++H AE AAE+L ++ P +
Sbjct: 583 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 642
Query: 637 AGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRA 696
G ++LL+NIY AA W+ V ++R + +GL+KTPGCS +EI V F HP +
Sbjct: 643 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 702
Query: 697 EDIYAILGNLELDIKEA 714
+ IYA L L IKEA
Sbjct: 703 KKIYAFLEKLICHIKEA 717
BLAST of CmaCh18G004830 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 410.6 bits (1054), Expect = 3.7e-113
Identity = 238/683 (34.85%), Postives = 363/683 (53.15%), Query Frame = 0
Query: 36 SLFSRCKSRQQLEQIHARFVLHGFHQNPTLSCKLID---CYANFGLLNVSHHVFNSIIDP 95
SL CK+ Q L IHA+ + G H KLI+ +F L + VF +I +P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 96 NSTLYNAILRNLTRFGEYERTLLVYREMVAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIH 155
N ++N + R + L +Y M++ + P+ T+PFVL+SC + G+ IH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 156 GCLIKLGVDSYDTVVTVLAEMYGKCIDFENAHQLFDKMSVKDLDCWSSLISEAPQNGNGD 215
G ++KLG D V T L MY + E+AH++FDK +D+ +
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY-------------- 217
Query: 216 EISLLLGRMKSEPLVTDSLTFINLLRSISGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVL 275
TA++
Sbjct: 218 --------------------------------------------------------TALI 277
Query: 276 SLYSKLGSLVDARKLFEKMPEKDRVVWNIMIAAYAREGRPMECLELFESMARSGIRADLF 335
Y+ G + +A+KLF+++P KD V WN MI+ YA G E LELF+ M ++ +R D
Sbjct: 278 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 337
Query: 336 TALPVISSISQLKCADWGKQTHANILRNGSDSQVSVHNSLIDMYCECNSLESACKIFNSV 395
T + V+S+ +Q + G+Q H I +G S + + N+LID+Y +C LE+AC +F +
Sbjct: 338 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 397
Query: 396 TNKTVISWSAMIKGNVKHGYPLIALSLFFMMKSDGIQADFITVINIMPAFVDIGALENVK 455
K VISW+ +I G AL LF M G + +T+++I+PA +GA++ +
Sbjct: 398 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 457
Query: 456 YLHGYSLK--LALTSLPSLNTALLITYAKCGCIEMAQRLFEEERVNDKDLIMWNSMISAH 515
++H Y K +T+ SL T+L+ YAKCG IE A ++F + K L WN+MI
Sbjct: 458 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS--ILHKSLSSWNAMIFGF 517
Query: 516 ANHGDWSQCFKLYNQMKCSNSNPDQVTFLGLLTACVNSGLVEKGKEFFKEMIESYSCQPS 575
A HG F L+++M+ PD +TF+GLL+AC +SG+++ G+ F+ M + Y P
Sbjct: 518 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 577
Query: 576 QEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLI 635
EHY CM++LLG +GL EA E++ M ++PD +W LL ACK+H +L E AE LI
Sbjct: 578 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI 637
Query: 636 DMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGRVAEFRVAD 695
+EP+N G+Y+LLSNIYA+AG+W+ VAK R+ L DKG+KK PGCS +EI+ V EF + D
Sbjct: 638 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 648
Query: 696 RTHPRAEDIYAILGNLELDIKEA 714
+ HPR +IY +L +E+ +++A
Sbjct: 698 KFHPRNREIYGMLEEMEVLLEKA 648
BLAST of CmaCh18G004830 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 406.8 bits (1044), Expect = 5.3e-112
Identity = 222/675 (32.89%), Postives = 373/675 (55.26%), Query Frame = 0
Query: 33 TLSSLFSRC---KSRQQLEQIHARFVLHGFHQNPTLSCKLIDCYANFGLLNVSHHVFNSI 92
TL S+ C KS + +++ +GF + L KL Y N G L + VF+ +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 93 IDPNSTLYNAILRNLTRFGEYERTLLVYREMVAKSMHPDEQTYPFVLQSCCCLSNVEFGK 152
+ +N ++ L + G++ ++ ++++M++ + D T+ V +S L +V G+
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 153 NIHGCLIKLGVDSYDTVVTVLAEMYGKCIDFENAHQLFDKMSVKDLDCWSSLISEAPQNG 212
+HG ++K G ++V L Y K ++A ++FD+M+ +D+ W+S+I+ NG
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 213 NGDEISLLLGRMKSEPLVTDSLTFINLLRSISGLSSIQLAKIVHCIAIVSNLCGDLLVDT 272
++ + +M + D T +++ + I L + VH I + + +
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 273 AVLSLYSKLGSLVDARKLFEKMPEKDRVVWNIMIAAYAREGRPMECLELFESMARSGIRA 332
+L +YSK G L A+ +F +M ++ V + MIA YAREG E ++LFE M GI
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 333 DLFTALPVISSISQLKCADWGKQTHANILRNGSDSQVSVHNSLIDMYCECNSLESACKIF 392
D++T V++ ++ + D GK+ H I N + V N+L+DMY +C S++ A +F
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 393 NSVTNKTVISWSAMIKGNVKHGYPLIALSLF-FMMKSDGIQADFITVINIMPAFVDIGAL 452
+ + K +ISW+ +I G K+ Y ALSLF +++ D TV ++PA + A
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 453 ENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCIEMAQRLFEEERVNDKDLIMWNSMIS 512
+ + +HGY ++ S + +L+ YAKCG + +A LF++ + KDL+ W MI+
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD--IASKDLVSWTVMIA 575
Query: 513 AHANHGDWSQCFKLYNQMKCSNSNPDQVTFLGLLTACVNSGLVEKGKEFFKEMIESYSCQ 572
+ HG + L+NQM+ + D+++F+ LL AC +SGLV++G FF M +
Sbjct: 576 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 635
Query: 573 PSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEK 632
P+ EHYAC+V++L R G + +A + NMPI PDA +WG LL C++H KLAE AEK
Sbjct: 636 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 695
Query: 633 LIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGRVAEFRV 692
+ ++EP+N G Y+L++NIYA A KW+ V ++R + +GL+K PGCSW+EI GRV F
Sbjct: 696 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 755
Query: 693 ADRTHPRAEDIYAIL 704
D ++P E+I A L
Sbjct: 756 GDSSNPETENIEAFL 768
BLAST of CmaCh18G004830 vs. ExPASy Swiss-Prot
Match:
Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)
HSP 1 Score: 404.1 bits (1037), Expect = 3.4e-111
Identity = 219/705 (31.06%), Postives = 386/705 (54.75%), Query Frame = 0
Query: 6 RSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRC---KSRQQLEQIHARFVLHGFHQN 65
R+ + Q+ F FK F + ++T L C K+ + ++ + G N
Sbjct: 115 RNGLLNQALAFYFKMLCFGVSPD--VSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCN 174
Query: 66 PTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREMVA 125
++ LI Y +G ++V +F+ ++ + ++N +L + G + + + M
Sbjct: 175 EFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 234
Query: 126 KSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDFEN 185
+ P+ T+ VL C ++ G +HG ++ GVD ++ L MY KC F++
Sbjct: 235 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 294
Query: 186 AHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSISG 245
A +LF MS D W+ +IS Q+G +E M S ++ D++TF +LL S+S
Sbjct: 295 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 354
Query: 246 LSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWNIM 305
+++ K +HC + ++ D+ + +A++ Y K + A+ +F + D VV+ M
Sbjct: 355 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 414
Query: 306 IAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRNGS 365
I+ Y G ++ LE+F + + I + T + ++ I L G++ H I++ G
Sbjct: 415 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 474
Query: 366 DSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFM 425
D++ ++ ++IDMY +C + A +IF ++ + ++SW++MI + P A+ +F
Sbjct: 475 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ 534
Query: 426 MKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGC 485
M GI D +++ + A ++ + K +HG+ +K +L S + L+ YAKCG
Sbjct: 535 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGN 594
Query: 486 IEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQM-KCSNSNPDQVTFLGL 545
++ A +F + + +K+++ WNS+I+A NHG L+++M + S PDQ+TFL +
Sbjct: 595 LKAAMNVF--KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 654
Query: 546 LTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKP 605
+++C + G V++G FF+ M E Y QP QEHYAC+V+L GRAG + EA E V++MP P
Sbjct: 655 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 714
Query: 606 DARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRS 665
DA VWG LL AC+LH +LAE A+ KL+D++P N+G Y+L+SN +A A +W+ V K+RS
Sbjct: 715 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 774
Query: 666 FLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNL 707
++++ ++K PG SW+EIN R F D HP + IY++L +L
Sbjct: 775 LMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
BLAST of CmaCh18G004830 vs. ExPASy Swiss-Prot
Match:
O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-108
Identity = 227/689 (32.95%), Postives = 382/689 (55.44%), Query Frame = 0
Query: 27 QSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFHQNPTLSCKLIDCYANFGLLNVSHHVF 86
+S+ ++ + +LF C + Q + +HAR V+ QN +S KL++ Y G + ++ H F
Sbjct: 50 ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 87 NSIIDPNSTLYNAILRNLTRFGEYERTLLVYR-EMVAKSMHPDEQTYPFVLQSCCCLSNV 146
+ I + + +N ++ R G + + M++ + PD +T+P VL++C V
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 169
Query: 147 EFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDFENAHQLFDKMSVKDLDCWSSLISEA 206
G IH +K G V L +Y + NA LFD+M V+D+ W+++IS
Sbjct: 170 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 229
Query: 207 PQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSISGLSSIQLAKIVHCIAIVSNLCGDL 266
Q+GN E L +++ DS+T ++LL + + +H +I L +L
Sbjct: 230 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 289
Query: 267 LVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWNIMIAAYAREGRPMECLELFESMARS 326
V ++ LY++ G L D +K+F++M +D + WN +I AY +P+ + LF+ M S
Sbjct: 290 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 349
Query: 327 GIRADLFTALPVISSISQLKCADWGKQTHANILRNG-SDSQVSVHNSLIDMYCECNSLES 386
I+ D T + + S +SQL + LR G +++ N+++ MY + ++S
Sbjct: 350 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 409
Query: 387 ACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFMMKSDG-IQADFITVINIMPAFV 446
A +FN + N VISW+ +I G ++G+ A+ ++ +M+ +G I A+ T ++++PA
Sbjct: 410 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 469
Query: 447 DIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCIEMAQRLFEE-ERVNDKDLIM 506
GAL LHG LK L + T+L Y KCG +E A LF + RVN +
Sbjct: 470 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS---VP 529
Query: 507 WNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLGLLTACVNSGLVEKGKEFFKEMI 566
WN++I+ H HG + L+ +M PD +TF+ LL+AC +SGLV++G+ F+ M
Sbjct: 530 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 589
Query: 567 ESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLA 626
Y PS +HY CMV++ GRAG + A + +++M ++PDA +WG LLSAC++H L
Sbjct: 590 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 649
Query: 627 EFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGR 686
+ A+E L ++EP++ G ++LLSN+YA+AGKW+GV ++RS KGL+KTPG S +E++ +
Sbjct: 650 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 709
Query: 687 VAEFRVADRTHPRAEDIYAILGNLELDIK 712
V F ++THP E++Y L L+ +K
Sbjct: 710 VEVFYTGNQTHPMYEEMYRELTALQAKLK 728
BLAST of CmaCh18G004830 vs. ExPASy TrEMBL
Match:
A0A6J1K3Q8 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111490383 PE=4 SV=1)
HSP 1 Score: 1463.7 bits (3788), Expect = 0.0e+00
Identity = 725/725 (100.00%), Postives = 725/725 (100.00%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH
Sbjct: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM
Sbjct: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF
Sbjct: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC
Sbjct: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG
Sbjct: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
Query: 721 LGTLL 726
LGTLL
Sbjct: 721 LGTLL 725
BLAST of CmaCh18G004830 vs. ExPASy TrEMBL
Match:
A0A6J1GR57 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456773 PE=4 SV=1)
HSP 1 Score: 1411.0 bits (3651), Expect = 0.0e+00
Identity = 699/725 (96.41%), Postives = 709/725 (97.79%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
MFHLQRSK PIFRFKFPNFPAT SRLLNTLSSLFSRCKSRQQL+QIHARFVLHGFH
Sbjct: 1 MFHLQRSK-----PIFRFKFPNFPATHSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNPTLSCKLIDCYANFGLLN+SHHVFNSIIDPNS LYNAILRNLTRFGEYERTLLVYREM
Sbjct: 61 QNPTLSCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
VAKSMHPDEQTYPFVL+SCCCLSNV+FGKNIHGCLIKLGVDSYDTVVTVL EMY KCIDF
Sbjct: 121 VAKSMHPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
ENAHQLFDKMSVKDLDCWSSLI+EAPQNGNGD+IS L GRMKSEPLVTDSLTFINLLRS+
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLITEAPQNGNGDDISRLFGRMKSEPLVTDSLTFINLLRSV 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEK+PEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAYAREGRPMECLELFESMARSGIRADLFT LPVISSISQLK ADWGKQTHANILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTVLPVISSISQLKRADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSDSQVSVHNSLIDMYCECNSL+SA KIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLDSASKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
F MKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC
Sbjct: 421 FRMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
GCI+MAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG
Sbjct: 481 GCIDMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKE KEMSPEK
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEVKEMSPEK 720
Query: 721 LGTLL 726
LGTLL
Sbjct: 721 LGTLL 720
BLAST of CmaCh18G004830 vs. ExPASy TrEMBL
Match:
A0A6J1CE61 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010677 PE=4 SV=1)
HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 621/725 (85.66%), Postives = 658/725 (90.76%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
M HLQRSK PIFRF+F NFPATQSR LNTLS LFSRC SRQQLEQIHARF+LHG H
Sbjct: 1 MLHLQRSK-----PIFRFEFSNFPATQSRPLNTLSFLFSRCSSRQQLEQIHARFILHGLH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNP LSC+LID YAN GLL +S VFNSIIDP STLY+AILRNL+ FGEYERTLLVYREM
Sbjct: 61 QNPALSCELIDSYANLGLLTLSQQVFNSIIDPTSTLYSAILRNLSSFGEYERTLLVYREM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
AKSMHPDE+TYP VL+SCCCLSNVE+G+ IHG L+KLGVD YD+ T LAEMY KCI F
Sbjct: 121 FAKSMHPDEETYPSVLRSCCCLSNVEYGRKIHGHLVKLGVDLYDSTATALAEMYRKCIGF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
EN H LFDKM +KD +CW+SL SEA QNGNGDEI L GRM++E LV+DSLTFINLLRSI
Sbjct: 181 ENGHDLFDKMPMKDFECWNSLNSEASQNGNGDEIFQLFGRMRTEQLVSDSLTFINLLRSI 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
GL+SIQLAKIVHC+AI SNLCGDLLV+TAVLSLYSKLG LV+ARKLF+KMPEKDRVVWN
Sbjct: 241 VGLNSIQLAKIVHCVAITSNLCGDLLVNTAVLSLYSKLGCLVNARKLFDKMPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAY REG P ECLELF+SMARSGIRADLFTALPVISSISQLKC DWGKQTHA+ LRN
Sbjct: 301 IMIAAYDREGNPAECLELFKSMARSGIRADLFTALPVISSISQLKCVDWGKQTHAHTLRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSD+QVSVHNSLIDMYCE N L+SACKIF+ +TNKTVISWSAMIKG VKHG L ALSLF
Sbjct: 361 GSDNQVSVHNSLIDMYCELNILDSACKIFSWMTNKTVISWSAMIKGCVKHGQSLNALSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
MKSDGIQADFITVINI+PAFV IGALENVKYLHGYS+KL LTSLPSLNTALLITYAKC
Sbjct: 421 SRMKSDGIQADFITVINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
GCIEMAQRLFEEERV+DKDLIMWNSMISAHANHGDWSQCFK+YNQMKCSNS PDQVTFLG
Sbjct: 481 GCIEMAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKIYNQMKCSNSRPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVEKGKE FKEMIE+Y CQPSQEHYACMVNLLGRAGLIN+AG LVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKECFKEMIENYGCQPSQEHYACMVNLLGRAGLINDAGALVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLRDKGLKKTPGCSWLEING V EFRVADRTHPRAEDIY ILGNLEL+IKEA+E SPEK
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGHVTEFRVADRTHPRAEDIYTILGNLELEIKEAREKSPEK 720
Query: 721 LGTLL 726
LG LL
Sbjct: 721 LGILL 720
BLAST of CmaCh18G004830 vs. ExPASy TrEMBL
Match:
A0A0A0M0Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534720 PE=4 SV=1)
HSP 1 Score: 1184.9 bits (3064), Expect = 0.0e+00
Identity = 591/721 (81.97%), Postives = 641/721 (88.90%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
M HL RSK I SPIF NFPATQSRLLNTLS LFSRC S Q L+QIHARF+LHGFH
Sbjct: 1 MLHLHRSKPIIHSPIFL----NFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNPTLS KLIDCYAN GLLN S VF S+IDPN TL+NAILRNLTR+GE ERTLLVY++M
Sbjct: 61 QNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
VAKSMHPDE+TYPFVL+SC SNV FG+ IHG L+KLG D +D V T LAEMY +CI+F
Sbjct: 121 VAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
ENAHQLFDK SVKDL SSL +E PQN NG+ I + GRM +E LV DS TF NLLR I
Sbjct: 181 ENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFI 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
+GL+SIQLAKIVHCIAIVS L GDLLV+TAVLSLYSKL SLVDARKLF+KMPEKDRVVWN
Sbjct: 241 AGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAYAREG+P ECLELF+SMARSGIR+DLFTALPVISSI+QLKC DWGKQTHA+ILRN
Sbjct: 301 IMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSDSQVSVHNSLIDMYCEC L+SACKIFN +T+K+VISWSAMIKG VK+G L ALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
MKSDGIQADF+ +INI+PAFV IGALENVKYLHGYS+KL LTSLPSLNTALLITYAKC
Sbjct: 421 SKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
G IEMAQRLFEEE+++DKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSNS PDQVTFLG
Sbjct: 481 GSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVEKGKEFFKEM ESY CQPSQEHYACMVNLLGRAGLI+EAGELV+NMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACK+HPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLR+KGLKK PGCSWLEING V EFRVAD+THPRA DIY ILGNLEL+IKE +E SP+
Sbjct: 661 SFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDT 717
Query: 721 L 722
L
Sbjct: 721 L 717
BLAST of CmaCh18G004830 vs. ExPASy TrEMBL
Match:
A0A5D3DB69 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00810 PE=4 SV=1)
HSP 1 Score: 1164.8 bits (3012), Expect = 0.0e+00
Identity = 585/721 (81.14%), Postives = 636/721 (88.21%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
M HLQRSK I +PI NFPATQSRLLNTLS LF+RC S Q L+QIHARF+LHGFH
Sbjct: 1 MLHLQRSKPIIHTPILL----NFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNPTLS KLIDCYAN GLL S VF SIIDPN TL+NAILRNLTR+GE ER LLVY++M
Sbjct: 61 QNPTLSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
VAKSMHPDE+TYPF+ +SC SNV FG+ IHG L+KLG DS+D V T LAEMY K I F
Sbjct: 121 VAKSMHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
ENAHQLFDK SVKDL SSL +E QNGNG+ I + RM++E LV DSLTF+NLLR I
Sbjct: 181 ENAHQLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFI 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
+GL+SIQLAKIVHCIAIVS L GDLLV TAVLSLYSKL SLVDAR+LF+KMPEKDRVVWN
Sbjct: 241 AGLNSIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAYAREG+P ECLELF+SMARSGIR+DLFTALPVISSI+QLKC DWGKQTHA+ILRN
Sbjct: 301 IMIAAYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSDSQVSVHNSLIDMYCEC L+SAC IFN +T+K+VISWSAMIKG VK+G L A SLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
MKSDGIQADF+T+INI+PAFV IGALENVKYLHGYS+KL LTSLPSLNTALLITYAKC
Sbjct: 421 SKMKSDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
G IEMAQRLFEEER++DKDLIMWNSMISAHANHGDWSQCFKLYN+MKCSNS PDQVTFLG
Sbjct: 481 GYIEMAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGL+EKGKEFFKEM ESY C PSQEH+ACMVNLLGRAGLI+EAGELVRNMPIK
Sbjct: 541 LLTACVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMR
Sbjct: 601 PDARVWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLR+KGLKKTPGCS LEINGRV EFRVAD+THPRAEDIY ILGNLEL+IKE +E S +
Sbjct: 661 SFLRNKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDT 717
Query: 721 L 722
L
Sbjct: 721 L 717
BLAST of CmaCh18G004830 vs. NCBI nr
Match:
XP_022994744.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1463.7 bits (3788), Expect = 0.0e+00
Identity = 725/725 (100.00%), Postives = 725/725 (100.00%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH
Sbjct: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM
Sbjct: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF
Sbjct: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC
Sbjct: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG
Sbjct: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
Query: 721 LGTLL 726
LGTLL
Sbjct: 721 LGTLL 725
BLAST of CmaCh18G004830 vs. NCBI nr
Match:
XP_023541395.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1428.3 bits (3696), Expect = 0.0e+00
Identity = 704/725 (97.10%), Postives = 717/725 (98.90%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
MFHLQRSK ITQSPIFRFKFPNFPATQSRL NTLSSLFSRCKSRQQL+QIHARFVLHGFH
Sbjct: 1 MFHLQRSKPITQSPIFRFKFPNFPATQSRLFNTLSSLFSRCKSRQQLQQIHARFVLHGFH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNPTLSCKLIDCYANFGLLN+SHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLL+YREM
Sbjct: 61 QNPTLSCKLIDCYANFGLLNLSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLMYREM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
V KSMHPDEQTYPFVL+SCCCLS+VEFGKNIHGCLIKLGVDSYDTVVTVLAEMY KCIDF
Sbjct: 121 VGKSMHPDEQTYPFVLRSCCCLSHVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYEKCIDF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
ENAHQLFDKMSVKDLDCWSSL+SEAPQNGNGD+ISLL GRMKSEP+VTDSLTFIN LRS+
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLMSEAPQNGNGDDISLLFGRMKSEPIVTDSLTFINRLRSV 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLK ADWGKQTHANILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKRADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSDSQVSVHNSLIDMYCECNSL+SACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLDSACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
F MKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC
Sbjct: 421 FRMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
GCI+MAQRLFEEERV+DKDLIMWNSMISAHANHGDWSQCFKLY+QMKCSNSNPDQVTFLG
Sbjct: 481 GCIDMAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKLYSQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
Query: 721 LGTLL 726
LGTLL
Sbjct: 721 LGTLL 725
BLAST of CmaCh18G004830 vs. NCBI nr
Match:
KAG7012542.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 700/725 (96.55%), Postives = 712/725 (98.21%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
MFHLQRSK PIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQL+QIHARFVLHGFH
Sbjct: 1 MFHLQRSK-----PIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNPTLSCKLIDCYANFGLLN+SHHVFNSIIDPNS LYNAILRNLTRFGEYERTLLVYREM
Sbjct: 61 QNPTLSCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
VAKSMHPDEQTYPFVL+SCCCLSNV+FGKNIHGCLIKLGVDSYDTVVTVL EMY KCIDF
Sbjct: 121 VAKSMHPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
ENAHQLFDKMSVKDLDCWSSL+S+APQNGNGD+ISLL GRMKSEPLVTDSLTFINLLRSI
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLMSDAPQNGNGDDISLLFGRMKSEPLVTDSLTFINLLRSI 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
SGLSSIQLAK+VHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEK+PEKDRVVWN
Sbjct: 241 SGLSSIQLAKMVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLK ADWGKQTHANILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKRADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSDSQVSVHNSLIDMYCECNSL+SACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLDSACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
F MKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC
Sbjct: 421 FRMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
GCI+MAQRLFEEERV+DKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG
Sbjct: 481 GCIDMAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVEKGKEFFKEMIE YSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIERYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKE KEMSPEK
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEVKEMSPEK 720
Query: 721 LGTLL 726
LGTLL
Sbjct: 721 LGTLL 720
BLAST of CmaCh18G004830 vs. NCBI nr
Match:
XP_022954531.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1411.0 bits (3651), Expect = 0.0e+00
Identity = 699/725 (96.41%), Postives = 709/725 (97.79%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
MFHLQRSK PIFRFKFPNFPAT SRLLNTLSSLFSRCKSRQQL+QIHARFVLHGFH
Sbjct: 1 MFHLQRSK-----PIFRFKFPNFPATHSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNPTLSCKLIDCYANFGLLN+SHHVFNSIIDPNS LYNAILRNLTRFGEYERTLLVYREM
Sbjct: 61 QNPTLSCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
VAKSMHPDEQTYPFVL+SCCCLSNV+FGKNIHGCLIKLGVDSYDTVVTVL EMY KCIDF
Sbjct: 121 VAKSMHPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
ENAHQLFDKMSVKDLDCWSSLI+EAPQNGNGD+IS L GRMKSEPLVTDSLTFINLLRS+
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLITEAPQNGNGDDISRLFGRMKSEPLVTDSLTFINLLRSV 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEK+PEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAYAREGRPMECLELFESMARSGIRADLFT LPVISSISQLK ADWGKQTHANILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTVLPVISSISQLKRADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSDSQVSVHNSLIDMYCECNSL+SA KIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLDSASKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
F MKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC
Sbjct: 421 FRMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
GCI+MAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG
Sbjct: 481 GCIDMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKE KEMSPEK
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEVKEMSPEK 720
Query: 721 LGTLL 726
LGTLL
Sbjct: 721 LGTLL 720
BLAST of CmaCh18G004830 vs. NCBI nr
Match:
KAG6573373.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1408.7 bits (3645), Expect = 0.0e+00
Identity = 697/721 (96.67%), Postives = 708/721 (98.20%), Query Frame = 0
Query: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
MFHLQRSK PIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQL+QIHARFVLHGFH
Sbjct: 1 MFHLQRSK-----PIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFH 60
Query: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
QNPTLSCKLIDCYANFGLLN+SHHVFNSIIDPNS LYNAILRNLTRFGEYERTLLVYREM
Sbjct: 61 QNPTLSCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREM 120
Query: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
VAKSMHPDEQTYPFVL+SCCCLSNV+FGKNIHGCLIKLGVDSYDTVVTVL EMY KCIDF
Sbjct: 121 VAKSMHPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDF 180
Query: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
ENAHQLFDKMSVKDLDCWSSLI+EAPQNGNGD+IS L GRMKSEPLVTDSLTFINLLRS+
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLITEAPQNGNGDDISRLFGRMKSEPLVTDSLTFINLLRSV 240
Query: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEK+PEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWN 300
Query: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLK ADWGKQTHANILRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKRADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
GSDSQVSVHNSLIDMYCECNSL+SACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLDSACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
F MKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC
Sbjct: 421 FRMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
GCI+MAQRLFEEERV+DKDLIMWNSMISAHANHGDWSQCF LYNQMKCSNSNPDQVTFLG
Sbjct: 481 GCIDMAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFNLYNQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 716
Query: 721 L 722
L
Sbjct: 721 L 716
BLAST of CmaCh18G004830 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 429.1 bits (1102), Expect = 7.1e-120
Identity = 225/677 (33.23%), Postives = 377/677 (55.69%), Query Frame = 0
Query: 37 LFSRCKSRQQLEQIHARFVLHGFHQNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTL 96
L RC S ++L QI +G +Q KL+ + +G ++ + VF I + L
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 97 YNAILRNLTRFGEYERTLLVYREMVAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLI 156
Y+ +L+ + + ++ L + M + P + ++L+ C + + GK IHG L+
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 157 KLGVDSYDTVVTVLAEMYGKCIDFENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISL 216
K G +T L MY KC A ++FD+M +DL W+++++ QNG
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 217 LLGRMKSEPLVTDSLTFINLLRSISGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYS 276
++ M E L +T +++L ++S L I + K +H A+ S + + TA++ +Y+
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 277 KLGSLVDARKLFEKMPEKDRVVWNIMIAAYAREGRPMECLELFESMARSGIRADLFTALP 336
K GSL AR+LF+ M E++ V WN MI AY + P E + +F+ M G++ + +
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 337 VISSISQLKCADWGKQTHANILRNGSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKT 396
+ + + L + G+ H + G D VSV NSLI MYC+C +++A +F + ++T
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 397 VISWSAMIKGNVKHGYPLIALSLFFMMKSDGIQADFITVINIMPAFVDIGALENVKYLHG 456
++SW+AMI G ++G P+ AL+ F M+S ++ D T ++++ A ++ + K++HG
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 457 YSLKLALTSLPSLNTALLITYAKCGCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDW 516
++ L + TAL+ YAKCG I +A+ +F + ++++ + WN+MI + HG
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF--DMMSERHVTTWNAMIDGYGTHGFG 522
Query: 517 SQCFKLYNQMKCSNSNPDQVTFLGLLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYAC 576
+L+ +M+ P+ VTFL +++AC +SGLVE G + F M E+YS + S +HY
Sbjct: 523 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 582
Query: 577 MVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKN 636
MV+LLGRAG +NEA + + MP+KP V+G +L AC++H AE AAE+L ++ P +
Sbjct: 583 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 642
Query: 637 AGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRA 696
G ++LL+NIY AA W+ V ++R + +GL+KTPGCS +EI V F HP +
Sbjct: 643 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 702
Query: 697 EDIYAILGNLELDIKEA 714
+ IYA L L IKEA
Sbjct: 703 KKIYAFLEKLICHIKEA 717
BLAST of CmaCh18G004830 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 410.6 bits (1054), Expect = 2.6e-114
Identity = 238/683 (34.85%), Postives = 363/683 (53.15%), Query Frame = 0
Query: 36 SLFSRCKSRQQLEQIHARFVLHGFHQNPTLSCKLID---CYANFGLLNVSHHVFNSIIDP 95
SL CK+ Q L IHA+ + G H KLI+ +F L + VF +I +P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 96 NSTLYNAILRNLTRFGEYERTLLVYREMVAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIH 155
N ++N + R + L +Y M++ + P+ T+PFVL+SC + G+ IH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 156 GCLIKLGVDSYDTVVTVLAEMYGKCIDFENAHQLFDKMSVKDLDCWSSLISEAPQNGNGD 215
G ++KLG D V T L MY + E+AH++FDK +D+ +
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY-------------- 217
Query: 216 EISLLLGRMKSEPLVTDSLTFINLLRSISGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVL 275
TA++
Sbjct: 218 --------------------------------------------------------TALI 277
Query: 276 SLYSKLGSLVDARKLFEKMPEKDRVVWNIMIAAYAREGRPMECLELFESMARSGIRADLF 335
Y+ G + +A+KLF+++P KD V WN MI+ YA G E LELF+ M ++ +R D
Sbjct: 278 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 337
Query: 336 TALPVISSISQLKCADWGKQTHANILRNGSDSQVSVHNSLIDMYCECNSLESACKIFNSV 395
T + V+S+ +Q + G+Q H I +G S + + N+LID+Y +C LE+AC +F +
Sbjct: 338 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 397
Query: 396 TNKTVISWSAMIKGNVKHGYPLIALSLFFMMKSDGIQADFITVINIMPAFVDIGALENVK 455
K VISW+ +I G AL LF M G + +T+++I+PA +GA++ +
Sbjct: 398 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 457
Query: 456 YLHGYSLK--LALTSLPSLNTALLITYAKCGCIEMAQRLFEEERVNDKDLIMWNSMISAH 515
++H Y K +T+ SL T+L+ YAKCG IE A ++F + K L WN+MI
Sbjct: 458 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS--ILHKSLSSWNAMIFGF 517
Query: 516 ANHGDWSQCFKLYNQMKCSNSNPDQVTFLGLLTACVNSGLVEKGKEFFKEMIESYSCQPS 575
A HG F L+++M+ PD +TF+GLL+AC +SG+++ G+ F+ M + Y P
Sbjct: 518 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 577
Query: 576 QEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLI 635
EHY CM++LLG +GL EA E++ M ++PD +W LL ACK+H +L E AE LI
Sbjct: 578 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI 637
Query: 636 DMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGRVAEFRVAD 695
+EP+N G+Y+LLSNIYA+AG+W+ VAK R+ L DKG+KK PGCS +EI+ V EF + D
Sbjct: 638 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 648
Query: 696 RTHPRAEDIYAILGNLELDIKEA 714
+ HPR +IY +L +E+ +++A
Sbjct: 698 KFHPRNREIYGMLEEMEVLLEKA 648
BLAST of CmaCh18G004830 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 406.8 bits (1044), Expect = 3.8e-113
Identity = 222/675 (32.89%), Postives = 373/675 (55.26%), Query Frame = 0
Query: 33 TLSSLFSRC---KSRQQLEQIHARFVLHGFHQNPTLSCKLIDCYANFGLLNVSHHVFNSI 92
TL S+ C KS + +++ +GF + L KL Y N G L + VF+ +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 93 IDPNSTLYNAILRNLTRFGEYERTLLVYREMVAKSMHPDEQTYPFVLQSCCCLSNVEFGK 152
+ +N ++ L + G++ ++ ++++M++ + D T+ V +S L +V G+
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 153 NIHGCLIKLGVDSYDTVVTVLAEMYGKCIDFENAHQLFDKMSVKDLDCWSSLISEAPQNG 212
+HG ++K G ++V L Y K ++A ++FD+M+ +D+ W+S+I+ NG
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 213 NGDEISLLLGRMKSEPLVTDSLTFINLLRSISGLSSIQLAKIVHCIAIVSNLCGDLLVDT 272
++ + +M + D T +++ + I L + VH I + + +
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 273 AVLSLYSKLGSLVDARKLFEKMPEKDRVVWNIMIAAYAREGRPMECLELFESMARSGIRA 332
+L +YSK G L A+ +F +M ++ V + MIA YAREG E ++LFE M GI
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 333 DLFTALPVISSISQLKCADWGKQTHANILRNGSDSQVSVHNSLIDMYCECNSLESACKIF 392
D++T V++ ++ + D GK+ H I N + V N+L+DMY +C S++ A +F
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 393 NSVTNKTVISWSAMIKGNVKHGYPLIALSLF-FMMKSDGIQADFITVINIMPAFVDIGAL 452
+ + K +ISW+ +I G K+ Y ALSLF +++ D TV ++PA + A
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 453 ENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCIEMAQRLFEEERVNDKDLIMWNSMIS 512
+ + +HGY ++ S + +L+ YAKCG + +A LF++ + KDL+ W MI+
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD--IASKDLVSWTVMIA 575
Query: 513 AHANHGDWSQCFKLYNQMKCSNSNPDQVTFLGLLTACVNSGLVEKGKEFFKEMIESYSCQ 572
+ HG + L+NQM+ + D+++F+ LL AC +SGLV++G FF M +
Sbjct: 576 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 635
Query: 573 PSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEK 632
P+ EHYAC+V++L R G + +A + NMPI PDA +WG LL C++H KLAE AEK
Sbjct: 636 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 695
Query: 633 LIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGRVAEFRV 692
+ ++EP+N G Y+L++NIYA A KW+ V ++R + +GL+K PGCSW+EI GRV F
Sbjct: 696 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 755
Query: 693 ADRTHPRAEDIYAIL 704
D ++P E+I A L
Sbjct: 756 GDSSNPETENIEAFL 768
BLAST of CmaCh18G004830 vs. TAIR 10
Match:
AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 404.1 bits (1037), Expect = 2.4e-112
Identity = 219/705 (31.06%), Postives = 386/705 (54.75%), Query Frame = 0
Query: 6 RSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRC---KSRQQLEQIHARFVLHGFHQN 65
R+ + Q+ F FK F + ++T L C K+ + ++ + G N
Sbjct: 115 RNGLLNQALAFYFKMLCFGVSPD--VSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCN 174
Query: 66 PTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREMVA 125
++ LI Y +G ++V +F+ ++ + ++N +L + G + + + M
Sbjct: 175 EFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 234
Query: 126 KSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDFEN 185
+ P+ T+ VL C ++ G +HG ++ GVD ++ L MY KC F++
Sbjct: 235 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 294
Query: 186 AHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSISG 245
A +LF MS D W+ +IS Q+G +E M S ++ D++TF +LL S+S
Sbjct: 295 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 354
Query: 246 LSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWNIM 305
+++ K +HC + ++ D+ + +A++ Y K + A+ +F + D VV+ M
Sbjct: 355 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 414
Query: 306 IAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRNGS 365
I+ Y G ++ LE+F + + I + T + ++ I L G++ H I++ G
Sbjct: 415 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 474
Query: 366 DSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFM 425
D++ ++ ++IDMY +C + A +IF ++ + ++SW++MI + P A+ +F
Sbjct: 475 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ 534
Query: 426 MKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGC 485
M GI D +++ + A ++ + K +HG+ +K +L S + L+ YAKCG
Sbjct: 535 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGN 594
Query: 486 IEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQM-KCSNSNPDQVTFLGL 545
++ A +F + + +K+++ WNS+I+A NHG L+++M + S PDQ+TFL +
Sbjct: 595 LKAAMNVF--KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 654
Query: 546 LTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKP 605
+++C + G V++G FF+ M E Y QP QEHYAC+V+L GRAG + EA E V++MP P
Sbjct: 655 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 714
Query: 606 DARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRS 665
DA VWG LL AC+LH +LAE A+ KL+D++P N+G Y+L+SN +A A +W+ V K+RS
Sbjct: 715 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 774
Query: 666 FLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNL 707
++++ ++K PG SW+EIN R F D HP + IY++L +L
Sbjct: 775 LMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
BLAST of CmaCh18G004830 vs. TAIR 10
Match:
AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 395.6 bits (1015), Expect = 8.7e-110
Identity = 227/689 (32.95%), Postives = 382/689 (55.44%), Query Frame = 0
Query: 27 QSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFHQNPTLSCKLIDCYANFGLLNVSHHVF 86
+S+ ++ + +LF C + Q + +HAR V+ QN +S KL++ Y G + ++ H F
Sbjct: 50 ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 87 NSIIDPNSTLYNAILRNLTRFGEYERTLLVYR-EMVAKSMHPDEQTYPFVLQSCCCLSNV 146
+ I + + +N ++ R G + + M++ + PD +T+P VL++C V
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 169
Query: 147 EFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDFENAHQLFDKMSVKDLDCWSSLISEA 206
G IH +K G V L +Y + NA LFD+M V+D+ W+++IS
Sbjct: 170 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 229
Query: 207 PQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSISGLSSIQLAKIVHCIAIVSNLCGDL 266
Q+GN E L +++ DS+T ++LL + + +H +I L +L
Sbjct: 230 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 289
Query: 267 LVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWNIMIAAYAREGRPMECLELFESMARS 326
V ++ LY++ G L D +K+F++M +D + WN +I AY +P+ + LF+ M S
Sbjct: 290 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 349
Query: 327 GIRADLFTALPVISSISQLKCADWGKQTHANILRNG-SDSQVSVHNSLIDMYCECNSLES 386
I+ D T + + S +SQL + LR G +++ N+++ MY + ++S
Sbjct: 350 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 409
Query: 387 ACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFMMKSDG-IQADFITVINIMPAFV 446
A +FN + N VISW+ +I G ++G+ A+ ++ +M+ +G I A+ T ++++PA
Sbjct: 410 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 469
Query: 447 DIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCIEMAQRLFEE-ERVNDKDLIM 506
GAL LHG LK L + T+L Y KCG +E A LF + RVN +
Sbjct: 470 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS---VP 529
Query: 507 WNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLGLLTACVNSGLVEKGKEFFKEMI 566
WN++I+ H HG + L+ +M PD +TF+ LL+AC +SGLV++G+ F+ M
Sbjct: 530 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 589
Query: 567 ESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLA 626
Y PS +HY CMV++ GRAG + A + +++M ++PDA +WG LLSAC++H L
Sbjct: 590 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 649
Query: 627 EFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGR 686
+ A+E L ++EP++ G ++LLSN+YA+AGKW+GV ++RS KGL+KTPG S +E++ +
Sbjct: 650 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 709
Query: 687 VAEFRVADRTHPRAEDIYAILGNLELDIK 712
V F ++THP E++Y L L+ +K
Sbjct: 710 VEVFYTGNQTHPMYEEMYRELTALQAKLK 728
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q3E6Q1 | 1.0e-118 | 33.23 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 3.7e-113 | 34.85 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9SN39 | 5.3e-112 | 32.89 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q9STE1 | 3.4e-111 | 31.06 | Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... | [more] |
O81767 | 1.2e-108 | 32.95 | Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1K3Q8 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
A0A6J1GR57 | 0.0e+00 | 96.41 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
A0A6J1CE61 | 0.0e+00 | 85.66 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Mom... | [more] |
A0A0A0M0Z6 | 0.0e+00 | 81.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534720 PE=4 SV=1 | [more] |
A0A5D3DB69 | 0.0e+00 | 81.14 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_022994744.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
XP_023541395.1 | 0.0e+00 | 97.10 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
KAG7012542.1 | 0.0e+00 | 96.55 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022954531.1 | 0.0e+00 | 96.41 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
KAG6573373.1 | 0.0e+00 | 96.67 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
AT1G11290.1 | 7.1e-120 | 33.23 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 2.6e-114 | 34.85 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18750.1 | 3.8e-113 | 32.89 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21300.1 | 2.4e-112 | 31.06 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33990.1 | 8.7e-110 | 32.95 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |