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CmaCh18G004700 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCAACCACCACCCACCGTCATGAACTCCACCGCCCTCCTCCACCGTGGAATCGCCCCAACACTGCCACTCCCGTTGTCGTTCCGACGCAACATGTCTTCTTCCGTTCACCTCGTCCCCAACGAGACCGTTAACAAGCACGACGCTCGGAGGTGTAGTAATAATGGCATCAAAATAGTGTGTCACAGATATAACCGAATGGAGTCGTCCGGTTCTCAGAACGATGGGTTTCCTTTTTTAAACACCAAAGTGGCTATGCAGTCGCTGCTGTGCTTCTCTTTGGATGCGGCGGCGGAGTTCGAAACCAAAGACATAAGTGCTCAGAAGGTGGGCTTTAGTTTATACTTTCAACTATGTTTAGGTTTGATTGTAAGTTTGAGGGTTTATTGTTTGTGGCAGAGAAAAGCTTTACAGGCATTGTTGGCTAATAATCCTGCAGAGGCTGAGAGGATAATGAAGAAGGTGCTCCAAAAATACAAAAATGACAAAGTTGAGATTAAATATGAAGCTACCTTGGCAATGGTTGCAATTCTCATCCACACGGTATTTTCTCCGGGGTATACATGAGCTAGATTGGGTTGGGTTAGTCGGGTTAAAATTATTTAGGAATTTCACTTATAGATACCTATTAGGTTGATAATTAGTTTAATTATTGAACATTTATCGATTGTTTTTAAAAGTAATTTAGAATTGGATTTCAAGTTGAATTTTGTTGTTATTCTGTTTTTGAGTTGGTCGGATTGAACTAAAATTTGAATTTTTGGTTTTTCGAAAATTTAATTATGAGAGCCAAAGGTCGATTGGAGAGGAGAATGAGTGCATTATTTGTAAGGGTGTGAAAACTTCTATCTAGGAAACGCGTTTTAAAAGTTTTGAGGGGAAACCCAAAAGGAAAAGCCTAGAGAGGAAAAATATTTGGTAGCGGTGGGCTTGGACTCTTACAAATGGTATCAGAGCTAGACACTTGGTGATGTGTCAATGAGGACGCTGAGCCTTGTAGAGGGGAAGACACCAGGCGGTGTGCCAATGAGGATGTTGAGCCTCAGAGGAGGGTAGACACTGCCATTGAGCCCCGGAGGGGGGTGGACACCGCTACGATGTGCCAGCGAGGACGCTGAGCCCCTTGAGAGAGTGGACACTGGGTAGTGTGCTAGCGAGGACGTTAAGCCCCTTAGGAAGGTGGACACTAAGCAGTGTGCCAGCAAGGATGCTGAGCTTCATTGGGGGTGGACACTAGGCGGTGTGCCAACAAGGACATTGAGCCTCGAAGGGGGTGGACACCAGGCGGTGTGCCAGCGAGGATGCTAAGGCTCGTAGGGAATGGACACCAGGCAGTGTGCCAGTGAAGATTCTAAGGCTCGTAGGGGGTGGACAACGAGCGGTGTACTAGCGAGGACATTGAGCCTCGAAAGGAGTGAACACTACCATTGAGCCCTAAAAGGGGTGGACACTAAGCGGTGTACTAGTGAGGACGCTAAGCTCCGTAGGGGGTGAACACCGGGCAGTGTGCCAGCATGGACGTTGAGCCACGTGGGGGGTGGACATCAGGTAGTGTGTCAGCGAGGACATTGTGCTACATAGGGAGTGGACATCAGACAGTGTGTTAGCGAGGACATTGAGACACATAAGAAGTGAACATCAGACAATGTGCAGCAAGGACGTTGAGCCACGTAGAGGATGAACATCGAATAGTGTACTAGTAAGGATGCACGGCCTCAAAGAAAGTCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTAACTCAACCCAACAATTTTTCACTCACCTTTATAAGGACTAATATATAATTTATTCCATAAATAATGTGTTTGTTATAATTGGGAAAGAAATGCTTTATTTTTCAAATGATTTTGTATAAACACTCTTTGAAAAAAAAAAAAAATCAATAATTTAATGTTAATTTATAATAGTTTTATTTATTTATTTGTTCATTTAGATGACAAAAGTGGGTTTTGAGAAAATATTCATAAAAAAAGTAAAAAAAATAATAAATAATAAATTTATCATTAATATAACAATAAAAAATATTTTAAATACTTAAAAAAAAAATGTAACTTATAATAATATTTTTATTGAAAATCTATATATATATATATCGAGTTGACTTAGTGATGAAAAGAAGCTTAATAAAATAAATCAAAATGTGTTCGAGACTACTTATTTTAAATTTAAAAATATTATTATTTTAATATAGGGACAAAGAAAAAGCTTGAGTGATGCTATGCTCTATCTAAACGACATAGAAGCGTGGAAGGCTAAGCCAAGTGACATAAAACGTATCCTTTATAGGGTAAGTTATTTGATCTTAATTAATTTTTGTTTCTATTTAAATAATATTTTGATTTTGAAGTTTCTTATTTTAAAATATCTTTTTTAGGTCAATATATTTTTTATTTTCAAACTATCATTTAATCTTTATTTATAAAACTTTAATTGTAGTAATAAAAATAGGTTAAAATAAACTTTTGGCAAGAAATTTATTTAATCTCATAATTGTAAAAATAAAAATAAAAAAATTATAAAGAGAACAAAATAAACATAAAAAAAAAAAAATTAAAATAGGTCTGGGTAAGAAAATCCAAGTTTAACCTTTAATTTTTTTAATAAATTATAATTTTTTTTTTAAGAATAAAATTGAAATTTTAAATAGACTATTTTTGAAATGACCATTATAGGCTTCTCATATATTTTTTTTTTTCTATAATAAATTTATAAAAAATGTTAAATTATAAGTTCAAACTTTAAATTTTTAAAGTTGTGTTTAAATTGGTTTGAATTTTTTTAATAAATGTCTAATAGATTTGAACTAAAATGACCCTTTTAACCTTTTATTTATTTATTTATTTATTTTGTTATTATAGCAATAAATTACAACTTTAACTTTTTGAATTTTTTTTAATAAATATCTAATATTTTCCATTAATAATAAAATTTAAAATTTTAAAAATATATTCCACAAGTGAAATGACAATTATAGTCTTCTCATTTTCTTACTTCTATCATAAATTTATAAATTACAAATTCAAACCTTAAATTTTTAAAGTGGTGTGTTTGACTGAGTTCCAATTTTTTTAATAAATGTCTAATAAATTCTAGTAAGAATAATACTAAAAGTTTAAAAGGTATATTTGATAAGTAAAATGACAATTTTAACCTTTTATTTTTCGTTATTATAGCAAAATTACAAGTTTAACCTTTTGAATTTTTTTAATAAATATCTAATATTTTCCATTAAGAATAAAATTTAAAATTTTAAAACTATATTTCATACGTGAAATTGACAATTATAGCCTTCTCATTTTCTTCTTTCTATTCTTTCTATAATAAATTTATTAAAAAAAACAGTTAAATTACAAGTTCAAACCTTAAATTTTTAAAATTGTGCCGTTTGAAATTTTTTAATAAATGTCTAATAGATTCTAATACGAATAATAACCCGTATATTTCATAAATAAAATGACAATTTTAACTTTTTATTTTTCATTATTACAACTACTAATTAAAATATAATAAATTACAAGTTTAACCTTTAAATTTAACCCGATTAAATTTTTTAATAAATATCTAATATTTTCCATTATGAATAAAATTGAAAATTTAAAAAGTATATTTCATAAGTGAAAGGACAATTATAGCCTTTTCCATTAGTTTTTTAATAAATGTCTAATAAATTCTAATACAATAATACCCGAAGTATATTTCATAAGTAAAATGACAATTTTAACCTTTTATTATTAGTTATTATAACAACTAATTAAAATATTAAATTTTTTAATAAATGTGTAATAAATTTAAAAAGTATATTTGATAAGTAAAATGACAATTTTAGCCTTATATTTTTCTTATTATCCATAATAATTTTTTAAAAAAGGCCACTAATTAAGTAATAATTTCATGCAGGCTGTTATATATACCTTATTGGAGAGCAGTATTGATGCTAAAGATAATTGGAAAATTTTCTCAGACAACATAGGCAGTGGCCCAAACATGATTTGAGTACCATCCTTTTTTATGGGG AACCAACCACCACCCACCGTCATGAACTCCACCGCCCTCCTCCACCGTGGAATCGCCCCAACACTGCCACTCCCGTTGTCGTTCCGACGCAACATGTCTTCTTCCGTTCACCTCGTCCCCAACGAGACCGTTAACAAGCACGACGCTCGGAGGTGTAGTAATAATGGCATCAAAATAGTGTGTCACAGATATAACCGAATGGAGTCGTCCGGTTCTCAGAACGATGGGTTTCCTTTTTTAAACACCAAAGTGGCTATGCAGTCGCTGCTGTGCTTCTCTTTGGATGCGGCGGCGGAGTTCGAAACCAAAGACATAAGTGCTCAGAAGAGAAAAGCTTTACAGGCATTGTTGGCTAATAATCCTGCAGAGGCTGAGAGGATAATGAAGAAGGTGCTCCAAAAATACAAAAATGACAAAGTTGAGATTAAATATGAAGCTACCTTGGCAATGGTTGCAATTCTCATCCACACGGGACAAAGAAAAAGCTTGAGTGATGCTATGCTCTATCTAAACGACATAGAAGCGTGGAAGGCTAAGCCAAGTGACATAAAACGTATCCTTTATAGGGCTGTTATATATACCTTATTGGAGAGCAGTATTGATGCTAAAGATAATTGGAAAATTTTCTCAGACAACATAGGCAGTGGCCCAAACATGATTTGAGTACCATCCTTTTTTATGGGG ATGAACTCCACCGCCCTCCTCCACCGTGGAATCGCCCCAACACTGCCACTCCCGTTGTCGTTCCGACGCAACATGTCTTCTTCCGTTCACCTCGTCCCCAACGAGACCGTTAACAAGCACGACGCTCGGAGGTGTAGTAATAATGGCATCAAAATAGTGTGTCACAGATATAACCGAATGGAGTCGTCCGGTTCTCAGAACGATGGGTTTCCTTTTTTAAACACCAAAGTGGCTATGCAGTCGCTGCTGTGCTTCTCTTTGGATGCGGCGGCGGAGTTCGAAACCAAAGACATAAGTGCTCAGAAGAGAAAAGCTTTACAGGCATTGTTGGCTAATAATCCTGCAGAGGCTGAGAGGATAATGAAGAAGGTGCTCCAAAAATACAAAAATGACAAAGTTGAGATTAAATATGAAGCTACCTTGGCAATGGTTGCAATTCTCATCCACACGGGACAAAGAAAAAGCTTGAGTGATGCTATGCTCTATCTAAACGACATAGAAGCGTGGAAGGCTAAGCCAAGTGACATAAAACGTATCCTTTATAGGGCTGTTATATATACCTTATTGGAGAGCAGTATTGATGCTAAAGATAATTGGAAAATTTTCTCAGACAACATAGGCAGTGGCCCAAACATGATTTGA MNSTALLHRGIAPTLPLPLSFRRNMSSSVHLVPNETVNKHDARRCSNNGIKIVCHRYNRMESSGSQNDGFPFLNTKVAMQSLLCFSLDAAAEFETKDISAQKRKALQALLANNPAEAERIMKKVLQKYKNDKVEIKYEATLAMVAILIHTGQRKSLSDAMLYLNDIEAWKAKPSDIKRILYRAVIYTLLESSIDAKDNWKIFSDNIGSGPNMI Homology
BLAST of CmaCh18G004700 vs. ExPASy TrEMBL
Match: A0A6J1K2L3 (uncharacterized protein LOC111490483 OS=Cucurbita maxima OX=3661 GN=LOC111490483 PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of CmaCh18G004700 vs. ExPASy TrEMBL
Match: A0A6J1GTH1 (uncharacterized protein LOC111457324 OS=Cucurbita moschata OX=3662 GN=LOC111457324 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 1.9e-81 Identity = 159/210 (75.71%), Postives = 173/210 (82.38%), Query Frame = 0
BLAST of CmaCh18G004700 vs. ExPASy TrEMBL
Match: A0A0A0LXK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G441330 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 3.0e-26 Identity = 92/234 (39.32%), Postives = 132/234 (56.41%), Query Frame = 0
BLAST of CmaCh18G004700 vs. ExPASy TrEMBL
Match: A0A6J1CHE7 (uncharacterized protein LOC111010906 OS=Momordica charantia OX=3673 GN=LOC111010906 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 3.0e-26 Identity = 87/212 (41.04%), Postives = 124/212 (58.49%), Query Frame = 0
BLAST of CmaCh18G004700 vs. ExPASy TrEMBL
Match: A0A1S3BA19 (uncharacterized protein LOC103487676 OS=Cucumis melo OX=3656 GN=LOC103487676 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-20 Identity = 92/240 (38.33%), Postives = 133/240 (55.42%), Query Frame = 0
BLAST of CmaCh18G004700 vs. NCBI nr
Match: XP_022994895.1 (uncharacterized protein LOC111490483 [Cucurbita maxima]) HSP 1 Score: 419.1 bits (1076), Expect = 2.3e-113 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of CmaCh18G004700 vs. NCBI nr
Match: XP_023542455.1 (uncharacterized protein LOC111802357 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 327.0 bits (837), Expect = 1.2e-85 Identity = 166/210 (79.05%), Postives = 181/210 (86.19%), Query Frame = 0
BLAST of CmaCh18G004700 vs. NCBI nr
Match: KAG6573362.1 (hypothetical protein SDJN03_27249, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 315.1 bits (806), Expect = 4.7e-82 Identity = 160/210 (76.19%), Postives = 178/210 (84.76%), Query Frame = 0
BLAST of CmaCh18G004700 vs. NCBI nr
Match: XP_022955331.1 (uncharacterized protein LOC111457324 [Cucurbita moschata]) HSP 1 Score: 312.0 bits (798), Expect = 4.0e-81 Identity = 159/210 (75.71%), Postives = 173/210 (82.38%), Query Frame = 0
BLAST of CmaCh18G004700 vs. NCBI nr
Match: KAG7012526.1 (hypothetical protein SDJN02_25278 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 183.7 bits (465), Expect = 1.6e-42 Identity = 95/132 (71.97%), Postives = 107/132 (81.06%), Query Frame = 0
BLAST of CmaCh18G004700 vs. TAIR 10
Match: AT2G34540.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 3.1e-07 Identity = 35/113 (30.97%), Postives = 63/113 (55.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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