CmaCh18G003880 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G003880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ethylene-responsive transcription factor 11-like
Location	Cma_Chr18: 2117705 .. 2118328 (-)
RNA-Seq Expression	CmaCh18G003880
Synteny	CmaCh18G003880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCAAGGGACAATCTTAAGGCGGCGGCGGTGGTGGTTGCCGGCAGCAAGGACAAGGAGGTGCATTTTAGAGGCGTCAGGAAGAGGCCGTGGGGAAGATACGCCGCAGAGATTAGAGATCCAGCAAAGAAAACCCGTGTTTGGTTAGGCACATTTGACACGGCGGAGGAGGCGGCGAGGGCTTACGACGCCGCCGCTCGCCAATTCCGCGGCGCTAAGGCTAAAACTAATTTCCCCTTTACCGTTGCTGTTAATGATCTTAATCTCAGTCCTAGCCGGAGTAGTACCGTTGAATCCTCTAGCCGTGACCCAATTCTTGACCTGAATCATGACGCCGTCGGATCTAGACCGGCGTTTCCGTTCAATCATCCTCAATTCGGAGGTGGGATTTTTCCGCCGCCGAATCATCTCCTGTTCTTCGATCATCCCATTTTTAGTATTCAAAATCATCAATCGGGTGTGATTTTTGATCGCCACCGGCAGAAGGTAGTGGCGAGTGGCGGAGTTCAGAGTGACTCTGATTCATCCTCTGTTATTGATCTGAACCAAAACGACCACCACAAATCAAGACCGGTAGTTCTAGATCTCGATCTCAATTTCCCACCACCGGAATCCGCTTAG

mRNA sequence

ATGGCGCCAAGGGACAATCTTAAGGCGGCGGCGGTGGTGGTTGCCGGCAGCAAGGACAAGGAGGTGCATTTTAGAGGCGTCAGGAAGAGGCCGTGGGGAAGATACGCCGCAGAGATTAGAGATCCAGCAAAGAAAACCCGTGTTTGGTTAGGCACATTTGACACGGCGGAGGAGGCGGCGAGGGCTTACGACGCCGCCGCTCGCCAATTCCGCGGCGCTAAGGCTAAAACTAATTTCCCCTTTACCGTTGCTGTTAATGATCTTAATCTCAGTCCTAGCCGGAGTAGTACCGTTGAATCCTCTAGCCGTGACCCAATTCTTGACCTGAATCATGACGCCGTCGGATCTAGACCGGCGTTTCCGTTCAATCATCCTCAATTCGGAGGTGGGATTTTTCCGCCGCCGAATCATCTCCTGTTCTTCGATCATCCCATTTTTAGTATTCAAAATCATCAATCGGGTGTGATTTTTGATCGCCACCGGCAGAAGGTAGTGGCGAGTGGCGGAGTTCAGAGTGACTCTGATTCATCCTCTGTTATTGATCTGAACCAAAACGACCACCACAAATCAAGACCGGTAGTTCTAGATCTCGATCTCAATTTCCCACCACCGGAATCCGCTTAG

Coding sequence (CDS)

ATGGCGCCAAGGGACAATCTTAAGGCGGCGGCGGTGGTGGTTGCCGGCAGCAAGGACAAGGAGGTGCATTTTAGAGGCGTCAGGAAGAGGCCGTGGGGAAGATACGCCGCAGAGATTAGAGATCCAGCAAAGAAAACCCGTGTTTGGTTAGGCACATTTGACACGGCGGAGGAGGCGGCGAGGGCTTACGACGCCGCCGCTCGCCAATTCCGCGGCGCTAAGGCTAAAACTAATTTCCCCTTTACCGTTGCTGTTAATGATCTTAATCTCAGTCCTAGCCGGAGTAGTACCGTTGAATCCTCTAGCCGTGACCCAATTCTTGACCTGAATCATGACGCCGTCGGATCTAGACCGGCGTTTCCGTTCAATCATCCTCAATTCGGAGGTGGGATTTTTCCGCCGCCGAATCATCTCCTGTTCTTCGATCATCCCATTTTTAGTATTCAAAATCATCAATCGGGTGTGATTTTTGATCGCCACCGGCAGAAGGTAGTGGCGAGTGGCGGAGTTCAGAGTGACTCTGATTCATCCTCTGTTATTGATCTGAACCAAAACGACCACCACAAATCAAGACCGGTAGTTCTAGATCTCGATCTCAATTTCCCACCACCGGAATCCGCTTAG

Protein sequence

MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAARAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAFPFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVIDLNQNDHHKSRPVVLDLDLNFPPPESA

Homology

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BLAST of CmaCh18G003880 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35
Identity = 97/200 (48.50%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 20  KEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAARAYDAAARQFRGAKAKTNF 79
           KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAEEAARAYD AAR FRGAKAKTNF
Sbjct: 21  KEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNF 80

Query: 80  PFTVAVNDLNL------SPSRSSTVESSSRDPILDLNHDAVGSRPAFPFNHPQFGGGI-- 139
           P  + ++D  +      SPS+SST++ +S   ++  +  A    P    +    GGG   
Sbjct: 81  PTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAGNVPPQLELSLGGGGGGSCY 140

Query: 140 -FPPPNHLLFFD-HPIFSIQNHQSGVIFDRHRQKVV-----ASGGVQSDSDSSSVIDLNQ 199
             P    + F D   I ++   Q   +    R  VV      + G QSDSDSSSV+D   
Sbjct: 141 QIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMACGAQSDSDSSSVVDFEG 200

Query: 200 NDHHKSRPVVLDLDLNFPPP 205
               +S+  +LDLDLN PPP
Sbjct: 201 GMEKRSQ--LLDLDLNLPPP 218

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BLAST of CmaCh18G003880 vs. ExPASy Swiss-Prot
Match: Q9C5I3 (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.1e-33
Identity = 102/207 (49.28%), Postives = 123/207 (59.42%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60
           MAP   +K AAV    ++   V +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA
Sbjct: 1   MAP--TVKTAAVKT--NEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAA 60

Query: 61  RAYDAAARQFRGAKAKTNFP-FTVAVNDLNL--SPSRSSTVESSSRDPILDLNHDAVGSR 120
           RAYD  A +FRGAKAKTNFP + +  + L+L  S S+SSTVESS   P L+L  D+V SR
Sbjct: 61  RAYDKRAIEFRGAKAKTNFPCYNINAHCLSLTQSLSQSSTVESSF--PNLNLGSDSVSSR 120

Query: 121 PAFPFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSS 180
             FPF   Q   G+                       ++FD            +S+SDSS
Sbjct: 121 --FPFPKIQVKAGM-----------------------MVFDE-----------RSESDSS 163

Query: 181 SVIDLNQNDHHKSRPVVLDLDLNFPPP 205
           SV+       ++ R VVLDLDLNFPPP
Sbjct: 181 SVV--MDVVRYEGRRVVLDLDLNFPPP 163

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BLAST of CmaCh18G003880 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-32
Identity = 106/229 (46.29%), Postives = 124/229 (54.15%), Query Frame = 0


Query: 6   NLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAARAYDA 65
           NLK   V   G   KEVH+RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAA+AYD 
Sbjct: 11  NLKGGNVKTDGV--KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDT 70

Query: 66  AARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRD---------PI-LDLNHDAVG 125
           AAR+FRG KAKTNFP        N SPS SSTVESSS +         P+ LDL    +G
Sbjct: 71  AAREFRGPKAKTNFPSPTE----NQSPSHSSTVESSSGENGVHAPPHAPLELDLTR-RLG 130

Query: 126 SRPA-------------FPFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQ 185
           S  A             +P  H Q    + P    +L FD         ++GV+      
Sbjct: 131 SVAADGGDNCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFD------SLWRAGVVNRPQPY 190

Query: 186 KVVASG--GVQSD-----SDSSSVIDLNQNDHHKSRPVVLDLDLNFPPP 205
            V   G  GV +      SDSSS ++ NQ D  +     +DLDLN  PP
Sbjct: 191 HVTPMGFNGVNAGVGPTVSDSSSAVEENQYDGKRG----IDLDLNLAPP 222

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BLAST of CmaCh18G003880 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-30
Identity = 98/211 (46.45%), Postives = 118/211 (55.92%), Query Frame = 0


Query: 20  KEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAARAYDAAARQFRGAKAKTNF 79
           KEVH+RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTAEEAA+AYD AAR+FRG KAKTNF
Sbjct: 23  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 80  PFTVAVNDLNLSPSRSSTVESSSRD---------PI-LDLNHDAVGSRPA---------- 139
           P    +   N S S SST+ESSS +         P+ LDL    +GS  A          
Sbjct: 83  P----LPSENQSTSHSSTMESSSGETGIHAPPHAPLELDLTR-RLGSVAADGGDNCRRSG 142

Query: 140 ---FPFNHPQFGGGIFPPPNHLLFFD---HPIFSIQNHQSGVIFDRHRQKVVASGGVQSD 199
              +P  H Q    + P    +L FD    P    +     V+        V +G   + 
Sbjct: 143 EVGYPIFHQQPTVAVLPNGQPVLLFDSLWRPGVVNRPQPYHVMPMAMGFNGVNAGVDPTV 202

Query: 200 SDSSSVIDLNQNDHHKSRPVVLDLDLNFPPP 205
           SDSSSV++ NQ D  +     +DLDLN  PP
Sbjct: 203 SDSSSVVEENQYDGKRG----IDLDLNLAPP 224

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BLAST of CmaCh18G003880 vs. ExPASy Swiss-Prot
Match: Q9MAI5 (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.6e-29
Identity = 88/192 (45.83%), Postives = 105/192 (54.69%), Query Frame = 0


Query: 20  KEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAARAYDAAARQFRGAKAKTNF 79
           KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTFDTA++AARAYDAAAR FRG KAKTNF
Sbjct: 27  KEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86

Query: 80  PFTVAVNDLNLSPSRSSTVESSS------RDPILDLNHDAVGS-RPAFPFNHPQFGGGIF 139
              V       SP++SSTV  S         P L+L+    G+ R   P  HP +   + 
Sbjct: 87  GVIV-----GSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRRKIPLVHPVYYYNMA 146

Query: 140 PPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVIDLNQNDHHKSRP 199
             P                             + + GVQS+S++SSV+D        S P
Sbjct: 147 TYPK----------------------------MTTCGVQSESETSSVVDFEGGAGKISPP 183

Query: 200 VVLDLDLNFPPP 205
             LDLDLN  PP
Sbjct: 207 --LDLDLNLAPP 183

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BLAST of CmaCh18G003880 vs. ExPASy TrEMBL
Match: A0A6J1K5A0 (ethylene-responsive transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=LOC111490184 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.3e-114
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60
           MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA
Sbjct: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60

Query: 61  RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120
           RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF
Sbjct: 61  RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120

Query: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVI 180
           PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVI
Sbjct: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVI 180

Query: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 208
           DLNQNDHHKSRPVVLDLDLNFPPPESA
Sbjct: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 207

[Close]

BLAST of CmaCh18G003880 vs. ExPASy TrEMBL
Match: A0A6J1GT40 (ethylene-responsive transcription factor 11-like OS=Cucurbita moschata OX=3662 GN=LOC111457236 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.0e-111
Identity = 202/207 (97.58%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60
           MAPRD LKAAAVVVAG KDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA
Sbjct: 1   MAPRDKLKAAAVVVAGGKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60

Query: 61  RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120
           RAYDAAA QFRGAKAKTNFPF VAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF
Sbjct: 61  RAYDAAALQFRGAKAKTNFPFPVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120

Query: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVI 180
           PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGV+FDRHRQKVVASGGVQSDSDSSSVI
Sbjct: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVVFDRHRQKVVASGGVQSDSDSSSVI 180

Query: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 208
           DLNQNDHHKSRPVVLDLDLNFPPPESA
Sbjct: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 207

[Close]

BLAST of CmaCh18G003880 vs. ExPASy TrEMBL
Match: A0A5A7UPH8 (Ethylene-responsive transcription factor 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G001010 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 9.6e-78
Identity = 164/213 (77.00%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVV---AGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAE 60
           MAPRD +KAA+  V   +GSKD EVHFRGVRKRPWGRYAAEIRDPAKK+RVWLGTFDTAE
Sbjct: 1   MAPRDKVKAASAAVTASSGSKDMEVHFRGVRKRPWGRYAAEIRDPAKKSRVWLGTFDTAE 60

Query: 61  EAARAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPI-LDLNHDAVGS 120
           EAARAYDAAAR+FRGAKAKTNFP    VNDLNLSPSRSSTVESSSRDP   DLN DA GS
Sbjct: 61  EAARAYDAAARKFRGAKAKTNFPLPPTVNDLNLSPSRSSTVESSSRDPTDFDLNQDASGS 120

Query: 121 RPAFPFNHPQFGGGIFP-PPNHLLFFDHPIFSIQNHQSGVIFDRHRQK-VVASGGVQSDS 180
           RP FP    QFGGGIFP   N   F DHPIF     +SGVI+DRHR K VV  GGVQSDS
Sbjct: 121 RPPFPSQQHQFGGGIFPQQSNQFRFLDHPIFR-NGTESGVIYDRHRVKAVVQCGGVQSDS 180

Query: 181 DSSSVIDLNQNDHHKSRPVVLDLDLNFPPPESA 208
           DSSSVI+LNQND HKSRP  LDLDLNFPPP+SA
Sbjct: 181 DSSSVINLNQNDDHKSRP-ALDLDLNFPPPDSA 211

[Close]

BLAST of CmaCh18G003880 vs. ExPASy TrEMBL
Match: A0A1S3B6N3 (ethylene-responsive transcription factor 8 OS=Cucumis melo OX=3656 GN=LOC103486594 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 9.6e-78
Identity = 164/213 (77.00%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVV---AGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAE 60
           MAPRD +KAA+  V   +GSKD EVHFRGVRKRPWGRYAAEIRDPAKK+RVWLGTFDTAE
Sbjct: 1   MAPRDKVKAASAAVTASSGSKDMEVHFRGVRKRPWGRYAAEIRDPAKKSRVWLGTFDTAE 60

Query: 61  EAARAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPI-LDLNHDAVGS 120
           EAARAYDAAAR+FRGAKAKTNFP    VNDLNLSPSRSSTVESSSRDP   DLN DA GS
Sbjct: 61  EAARAYDAAARKFRGAKAKTNFPLPPTVNDLNLSPSRSSTVESSSRDPTDFDLNQDASGS 120

Query: 121 RPAFPFNHPQFGGGIFP-PPNHLLFFDHPIFSIQNHQSGVIFDRHRQK-VVASGGVQSDS 180
           RP FP    QFGGGIFP   N   F DHPIF     +SGVI+DRHR K VV  GGVQSDS
Sbjct: 121 RPPFPSQQHQFGGGIFPQQSNQFRFLDHPIFR-NGTESGVIYDRHRVKAVVQCGGVQSDS 180

Query: 181 DSSSVIDLNQNDHHKSRPVVLDLDLNFPPPESA 208
           DSSSVI+LNQND HKSRP  LDLDLNFPPP+SA
Sbjct: 181 DSSSVINLNQNDDHKSRP-ALDLDLNFPPPDSA 211

[Close]

BLAST of CmaCh18G003880 vs. ExPASy TrEMBL
Match: A0A0A0LXG4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075060 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77
Identity = 164/213 (77.00%), Postives = 172/213 (80.75%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVVA---GSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAE 60
           MAPRD +K AA  V+   GSKD EVHFRGVRKRPWGRYAAEIRDPAKK+RVWLGTFDTAE
Sbjct: 1   MAPRDKVKTAAAAVSAPPGSKDMEVHFRGVRKRPWGRYAAEIRDPAKKSRVWLGTFDTAE 60

Query: 61  EAARAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPI-LDLNHDAVGS 120
           EAARAYDAAAR+FRGAKAKTNFPF   VNDLNLSPSRSSTVESSSRDP   DLN  A GS
Sbjct: 61  EAARAYDAAARKFRGAKAKTNFPFPPTVNDLNLSPSRSSTVESSSRDPTDFDLNQAAAGS 120

Query: 121 RPAFPFNHPQFGGGIFP-PPNHLLFFDHPIFSIQNHQSGVIFDRHRQK-VVASGGVQSDS 180
           R  FPF   QFGGGIFP   N   F DHPIF     +SGVI+DRHR K VV  GGVQSDS
Sbjct: 121 RLPFPFQQHQFGGGIFPQQANQFRFLDHPIFR-NGTESGVIYDRHRVKAVVQCGGVQSDS 180

Query: 181 DSSSVIDLNQNDHHKSRPVVLDLDLNFPPPESA 208
           DSSSVI+LNQND HKSRP  LDLDLNFPPP+SA
Sbjct: 181 DSSSVINLNQNDDHKSRP-ALDLDLNFPPPDSA 211

[Close]

BLAST of CmaCh18G003880 vs. NCBI nr
Match: XP_022994473.1 (ethylene-responsive transcription factor 11-like [Cucurbita maxima])

HSP 1 Score: 419.5 bits (1077), Expect = 1.7e-113
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60
           MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA
Sbjct: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60

Query: 61  RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120
           RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF
Sbjct: 61  RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120

Query: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVI 180
           PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVI
Sbjct: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVI 180

Query: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 208
           DLNQNDHHKSRPVVLDLDLNFPPPESA
Sbjct: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 207

[Close]

BLAST of CmaCh18G003880 vs. NCBI nr
Match: XP_023542234.1 (ethylene-responsive transcription factor 11-like [Cucurbita pepo subsp. pepo] >KAG6573286.1 Ethylene-responsive transcription factor 9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012451.1 Ethylene-responsive transcription factor 9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.9 bits (1060), Expect = 1.6e-111
Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60
           MAPRD LKAAAVVVAG KDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA
Sbjct: 1   MAPRDKLKAAAVVVAGGKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60

Query: 61  RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120
           RAYDAAARQFRGAKAKTNFPF VAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF
Sbjct: 61  RAYDAAARQFRGAKAKTNFPFPVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120

Query: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVI 180
           PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGV+FDRHRQKVVASGGVQSDSDSSSVI
Sbjct: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVVFDRHRQKVVASGGVQSDSDSSSVI 180

Query: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 208
           DLNQNDHHKSRPVVLDLDLNFPPPESA
Sbjct: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 207

[Close]

BLAST of CmaCh18G003880 vs. NCBI nr
Match: XP_022955196.1 (ethylene-responsive transcription factor 11-like [Cucurbita moschata])

HSP 1 Score: 410.2 bits (1053), Expect = 1.0e-110
Identity = 202/207 (97.58%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60
           MAPRD LKAAAVVVAG KDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA
Sbjct: 1   MAPRDKLKAAAVVVAGGKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60

Query: 61  RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120
           RAYDAAA QFRGAKAKTNFPF VAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF
Sbjct: 61  RAYDAAALQFRGAKAKTNFPFPVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF 120

Query: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVI 180
           PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGV+FDRHRQKVVASGGVQSDSDSSSVI
Sbjct: 121 PFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVVFDRHRQKVVASGGVQSDSDSSSVI 180

Query: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 208
           DLNQNDHHKSRPVVLDLDLNFPPPESA
Sbjct: 181 DLNQNDHHKSRPVVLDLDLNFPPPESA 207

[Close]

BLAST of CmaCh18G003880 vs. NCBI nr
Match: XP_038893987.1 (ethylene-responsive transcription factor 4 [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 170/208 (81.73%), Postives = 175/208 (84.13%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60
           M+PRD +KAAA    G KDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA
Sbjct: 1   MSPRDKVKAAA-APGGGKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60

Query: 61  RAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPI-LDLNHDAVGSRPA 120
           RAYDAAARQFRGAKAKTNFPF   VNDLNLSPSRSSTVESSSRDP   DLN DA GSRP 
Sbjct: 61  RAYDAAARQFRGAKAKTNFPFPATVNDLNLSPSRSSTVESSSRDPTDFDLNQDAAGSRPP 120

Query: 121 FPFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSV 180
           FPF+HPQFGGGIFP PN   F DHPIF      SGVIFDRHR K V  GGVQSDSDSSSV
Sbjct: 121 FPFHHPQFGGGIFPQPNQFHFLDHPIFR-NGMNSGVIFDRHRLKTVQCGGVQSDSDSSSV 180

Query: 181 IDLNQNDHHKSRPVVLDLDLNFPPPESA 208
           I+LNQND  KSRP VLDLDLNFPPP+SA
Sbjct: 181 INLNQND-QKSRP-VLDLDLNFPPPDSA 204

[Close]

BLAST of CmaCh18G003880 vs. NCBI nr
Match: XP_008442824.1 (PREDICTED: ethylene-responsive transcription factor 8 [Cucumis melo] >KAA0057010.1 ethylene-responsive transcription factor 8 [Cucumis melo var. makuwa] >TYK26437.1 ethylene-responsive transcription factor 8 [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 2.0e-77
Identity = 164/213 (77.00%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVV---AGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAE 60
           MAPRD +KAA+  V   +GSKD EVHFRGVRKRPWGRYAAEIRDPAKK+RVWLGTFDTAE
Sbjct: 1   MAPRDKVKAASAAVTASSGSKDMEVHFRGVRKRPWGRYAAEIRDPAKKSRVWLGTFDTAE 60

Query: 61  EAARAYDAAARQFRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPI-LDLNHDAVGS 120
           EAARAYDAAAR+FRGAKAKTNFP    VNDLNLSPSRSSTVESSSRDP   DLN DA GS
Sbjct: 61  EAARAYDAAARKFRGAKAKTNFPLPPTVNDLNLSPSRSSTVESSSRDPTDFDLNQDASGS 120

Query: 121 RPAFPFNHPQFGGGIFP-PPNHLLFFDHPIFSIQNHQSGVIFDRHRQK-VVASGGVQSDS 180
           RP FP    QFGGGIFP   N   F DHPIF     +SGVI+DRHR K VV  GGVQSDS
Sbjct: 121 RPPFPSQQHQFGGGIFPQQSNQFRFLDHPIFR-NGTESGVIYDRHRVKAVVQCGGVQSDS 180

Query: 181 DSSSVIDLNQNDHHKSRPVVLDLDLNFPPPESA 208
           DSSSVI+LNQND HKSRP  LDLDLNFPPP+SA
Sbjct: 181 DSSSVINLNQNDDHKSRP-ALDLDLNFPPPDSA 211

[Close]

BLAST of CmaCh18G003880 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 151.4 bits (381), Expect = 8.1e-37
Identity = 97/200 (48.50%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 20  KEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAARAYDAAARQFRGAKAKTNF 79
           KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAEEAARAYD AAR FRGAKAKTNF
Sbjct: 21  KEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNF 80

Query: 80  PFTVAVNDLNL------SPSRSSTVESSSRDPILDLNHDAVGSRPAFPFNHPQFGGGI-- 139
           P  + ++D  +      SPS+SST++ +S   ++  +  A    P    +    GGG   
Sbjct: 81  PTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAGNVPPQLELSLGGGGGGSCY 140

Query: 140 -FPPPNHLLFFD-HPIFSIQNHQSGVIFDRHRQKVV-----ASGGVQSDSDSSSVIDLNQ 199
             P    + F D   I ++   Q   +    R  VV      + G QSDSDSSSV+D   
Sbjct: 141 QIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMACGAQSDSDSSSVVDFEG 200

Query: 200 NDHHKSRPVVLDLDLNFPPP 205
               +S+  +LDLDLN PPP
Sbjct: 201 GMEKRSQ--LLDLDLNLPPP 218

[Close]

BLAST of CmaCh18G003880 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 141.7 bits (356), Expect = 6.4e-34
Identity = 102/207 (49.28%), Postives = 123/207 (59.42%), Query Frame = 0


Query: 1   MAPRDNLKAAAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAA 60
           MAP   +K AAV    ++   V +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA
Sbjct: 1   MAP--TVKTAAVKT--NEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAA 60

Query: 61  RAYDAAARQFRGAKAKTNFP-FTVAVNDLNL--SPSRSSTVESSSRDPILDLNHDAVGSR 120
           RAYD  A +FRGAKAKTNFP + +  + L+L  S S+SSTVESS   P L+L  D+V SR
Sbjct: 61  RAYDKRAIEFRGAKAKTNFPCYNINAHCLSLTQSLSQSSTVESSF--PNLNLGSDSVSSR 120

Query: 121 PAFPFNHPQFGGGIFPPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSS 180
             FPF   Q   G+                       ++FD            +S+SDSS
Sbjct: 121 --FPFPKIQVKAGM-----------------------MVFDE-----------RSESDSS 163

Query: 181 SVIDLNQNDHHKSRPVVLDLDLNFPPP 205
           SV+       ++ R VVLDLDLNFPPP
Sbjct: 181 SVV--MDVVRYEGRRVVLDLDLNFPPP 163

[Close]

BLAST of CmaCh18G003880 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-30
Identity = 88/192 (45.83%), Postives = 105/192 (54.69%), Query Frame = 0


Query: 20  KEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAARAYDAAARQFRGAKAKTNF 79
           KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTFDTA++AARAYDAAAR FRG KAKTNF
Sbjct: 27  KEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86

Query: 80  PFTVAVNDLNLSPSRSSTVESSS------RDPILDLNHDAVGS-RPAFPFNHPQFGGGIF 139
              V       SP++SSTV  S         P L+L+    G+ R   P  HP +   + 
Sbjct: 87  GVIV-----GSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRRKIPLVHPVYYYNMA 146

Query: 140 PPPNHLLFFDHPIFSIQNHQSGVIFDRHRQKVVASGGVQSDSDSSSVIDLNQNDHHKSRP 199
             P                             + + GVQS+S++SSV+D        S P
Sbjct: 147 TYPK----------------------------MTTCGVQSESETSSVVDFEGGAGKISPP 183

Query: 200 VVLDLDLNFPPP 205
             LDLDLN  PP
Sbjct: 207 --LDLDLNLAPP 183

[Close]

BLAST of CmaCh18G003880 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 124.8 bits (312), Expect = 8.1e-29
Identity = 68/99 (68.69%), Postives = 74/99 (74.75%), Query Frame = 0


Query: 1  MAPRD-NLKAAAVVVAG--------SKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLG 60
          MAPR  N ++ AV   G        +  KEVHFRGVRKRPWGRYAAEIRDP KKTRVWLG
Sbjct: 1  MAPRQANGRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLG 60

Query: 61 TFDTAEEAARAYDAAARQFRGAKAKTNFPF---TVAVND 88
          TFDTAEEAARAYD AAR+FRG+KAKTNFP    +  VND
Sbjct: 61 TFDTAEEAARAYDTAAREFRGSKAKTNFPLPGESTTVND 99

[Close]

BLAST of CmaCh18G003880 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 90/225 (40.00%), Postives = 107/225 (47.56%), Query Frame = 0


Query: 10  AAVVVAGSKDKEVHFRGVRKRPWGRYAAEIRDPAKKTRVWLGTFDTAEEAARAYDAAARQ 69
           A  V AG   KE  +RGVRKRPWGR+AAEIRDP KK+RVWLGTFD+A +AARAYD AAR 
Sbjct: 13  ALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARN 72

Query: 70  FRGAKAKTNFPFTVAVNDLNLSPSRSSTVESSSRDPILDLNHDAVGSRPAF-----PF-N 129
            RG KAKTNFP       ++ SP       SS   P+  L++  + S P       PF +
Sbjct: 73  LRGPKAKTNFP-------IDCSP-------SSPLQPLTYLHNQNLCSPPVIQNQIDPFMD 132

Query: 130 HPQFGGGIFPPPNHLLFFDHPIFSIQNH----------------QSGVIFDRH------R 189
           H  +GGG F           P  S  +                  S V    H      R
Sbjct: 133 HRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPR 192

Query: 190 QKVVASGGVQSDSDSSSVIDLNQNDHHKS---RPVVLDLDLNFPP 204
              VA     SD DSSS +  + +D   S   R      DLNFPP
Sbjct: 193 TPPVAPEDCHSDCDSSSSVIDDGDDIASSSSRRKTPFQFDLNFPP 223

The following BLAST results are available for this feature:

BLAST of CmaCh18G003880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80340	1.1e-35	48.50	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9C5I3	9.1e-33	49.28	Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q40477	1.5e-32	46.29	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9LW49	1.9e-30	46.45	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q9MAI5	3.6e-29	45.83	Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of CmaCh18G003880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K5A0	8.3e-114	100.00	ethylene-responsive transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GT40	5.0e-111	97.58	ethylene-responsive transcription factor 11-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A5A7UPH8	9.6e-78	77.00	Ethylene-responsive transcription factor 8 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B6N3	9.6e-78	77.00	ethylene-responsive transcription factor 8 OS=Cucumis melo OX=3656 GN=LOC1034865...	[more]
A0A0A0LXG4	2.1e-77	77.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075060 PE=...	[more]

BLAST of CmaCh18G003880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022994473.1	1.7e-113	100.00	ethylene-responsive transcription factor 11-like [Cucurbita maxima]	[more]
XP_023542234.1	1.6e-111	98.07	ethylene-responsive transcription factor 11-like [Cucurbita pepo subsp. pepo] >K...	[more]
XP_022955196.1	1.0e-110	97.58	ethylene-responsive transcription factor 11-like [Cucurbita moschata]	[more]
XP_038893987.1	1.1e-83	81.73	ethylene-responsive transcription factor 4 [Benincasa hispida]	[more]
XP_008442824.1	2.0e-77	77.00	PREDICTED: ethylene-responsive transcription factor 8 [Cucumis melo] >KAA0057010...	[more]

BLAST of CmaCh18G003880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15210.1	8.1e-37	48.50	ethylene responsive element binding factor 4	[more]
AT1G28370.1	6.4e-34	49.28	ERF domain protein 11	[more]
AT1G53170.1	2.5e-30	45.83	ethylene response factor 8	[more]
AT5G44210.1	8.1e-29	68.69	erf domain protein 9	[more]
AT3G20310.1	1.7e-26	40.00	ethylene response factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 24..35 score: 60.91 coord: 46..62 score: 76.36
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 e-value: 5.5E-37 score: 138.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 23..72 e-value: 1.6E-14 score: 53.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 23..80 score: 23.854376
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 23..80 e-value: 8.10648E-20 score: 77.3119
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 22..82 e-value: 4.5E-28 score: 99.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..181
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 6..187
None	No IPR available	PANTHER	PTHR31677:SF113	ERF DOMAIN PROTEIN 9-RELATED	coord: 6..187
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 23..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G003880.1	CmaCh18G003880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity