CmaCh18G002590 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G002590
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ATP synthase gamma chain
Location	Cma_Chr18: 1357052 .. 1357928 (+)
RNA-Seq Expression	CmaCh18G002590
Synteny	CmaCh18G002590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTTGTCGCAGCTGCCAAAGTCCGCAGAGCTCAAGAAGCTGTCGTAATGGAAGACCCTTCTCAGAGGCCTTGGTCGAGGTCCTTTACAACATCAATGAACAACTCCAAGCAGAGGACATTGACACTCCTCTAACCAAAGTTAGACCCGTCAAGAAAGTCGCATTGGTTGTTGTCACCGGCGACCGCGGCCTCTGTGGTGGCTTCAACAATTCCATCATCAAGAAAGCCGAAGCCAGAATTTCGGAATCTCGGAATTGGATCTTGACTACACTGTAATCAGCGTTGGGAAAAAGGGTAACACTTATTTCCTCCGCCGGCCGTACATTCCGGTGGATAAATTCCTCGAAGGCGGCACTCTTCCGACAGCCAAAGAAGCTCAAGCCATAGCTGATGTTTTTTCCTTATTTGTAAGCGAGGAAGTCGATAAAGTAGAGCTTTTATACACAAAATTCGTGTCATTAGTCAAATCCGACCCTGTAATTCATACCCTTCTTCCTCTGTCGCCAAAGGGTGAGATCTGTGATGTGAACGGAATATGTGTGGATGCGGCAGAGGATGAGTTCTTCAGATTAACAACAAAGGAAGGGAAATTGACAGTGGAAAGGGATTCAGTGAGGACAAGCACCACGGATTTCTCACCGAGTTTGGAGTTCGAGCAGGATCCAGTTCAGATCTTGGATGCTTTATTGCCTCTGTATTTGAACAGCCAGATTTTGAGGTCTCTGCAAGAGTCGCTGGCGAGTGAGCTCGCAGCTAGTGCCACGGATAATGCTTCTGAGCTGAAGAGGACTTTGTCGATTGTGTATAATAGACAACGCCAAGATAAGATTACCGGAGAAATTTGGAGATTATTGCTGGTGCTAATGCATTGA

mRNA sequence

ATGAAGCTTGTCGCAGCTGCCAAAGTCCGCAGAGCTCAAGAAGCTGTCGTAATGGAAGACCCTTCTCAGAGGCCTTGGTCGAGCCGAAGCCAGAATTTCGGAATCTCGGAATTGGATCTTGACTACACTGTAATCAGCGTTGGGAAAAAGGGTAACACTTATTTCCTCCGCCGGCCGTACATTCCGGTGGATAAATTCCTCGAAGGCGGCACTCTTCCGACAGCCAAAGAAGCTCAAGCCATAGCTGATGTTTTTTCCTTATTTGTAAGCGAGGAAGTCGATAAAGTAGAGCTTTTATACACAAAATTCGTGTCATTAGTCAAATCCGACCCTGTAATTCATACCCTTCTTCCTCTGTCGCCAAAGGGTGAGATCTGTGATGTGAACGGAATATGTGTGGATGCGGCAGAGGATGAGTTCTTCAGATTAACAACAAAGGAAGGGAAATTGACAGTGGAAAGGGATTCAGTGAGGACAAGCACCACGGATTTCTCACCGAGTTTGGAGTTCGAGCAGGATCCAGTTCAGATCTTGGATGCTTTATTGCCTCTGTATTTGAACAGCCAGATTTTGAGGTCTCTGCAAGAGTCGCTGGCGAGTGAGCTCGCAGCTAGTGCCACGGATAATGCTTCTGAGCTGAAGAGGACTTTGTCGATTGTGTATAATAGACAACGCCAAGATAAGATTACCGGAGAAATTTGGAGATTATTGCTGGTGCTAATGCATTGA

Coding sequence (CDS)

ATGAAGCTTGTCGCAGCTGCCAAAGTCCGCAGAGCTCAAGAAGCTGTCGTAATGGAAGACCCTTCTCAGAGGCCTTGGTCGAGCCGAAGCCAGAATTTCGGAATCTCGGAATTGGATCTTGACTACACTGTAATCAGCGTTGGGAAAAAGGGTAACACTTATTTCCTCCGCCGGCCGTACATTCCGGTGGATAAATTCCTCGAAGGCGGCACTCTTCCGACAGCCAAAGAAGCTCAAGCCATAGCTGATGTTTTTTCCTTATTTGTAAGCGAGGAAGTCGATAAAGTAGAGCTTTTATACACAAAATTCGTGTCATTAGTCAAATCCGACCCTGTAATTCATACCCTTCTTCCTCTGTCGCCAAAGGGTGAGATCTGTGATGTGAACGGAATATGTGTGGATGCGGCAGAGGATGAGTTCTTCAGATTAACAACAAAGGAAGGGAAATTGACAGTGGAAAGGGATTCAGTGAGGACAAGCACCACGGATTTCTCACCGAGTTTGGAGTTCGAGCAGGATCCAGTTCAGATCTTGGATGCTTTATTGCCTCTGTATTTGAACAGCCAGATTTTGAGGTCTCTGCAAGAGTCGCTGGCGAGTGAGCTCGCAGCTAGTGCCACGGATAATGCTTCTGAGCTGAAGAGGACTTTGTCGATTGTGTATAATAGACAACGCCAAGATAAGATTACCGGAGAAATTTGGAGATTATTGCTGGTGCTAATGCATTGA

Protein sequence

MKLVAAAKVRRAQEAVVMEDPSQRPWSSRSQNFGISELDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGGTLPTAKEAQAIADVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVNGICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQILRSLQESLASELAASATDNASELKRTLSIVYNRQRQDKITGEIWRLLLVLMH

Homology

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BLAST of CmaCh18G002590 vs. ExPASy Swiss-Prot
Match: Q01908 (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATPC1 PE=1 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 9.4e-90
Identity = 193/294 (65.65%), Postives = 213/294 (72.45%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDP--------------------------------------- 60
           MKLVAAAKVRRAQEAVV   P                                       
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVV 132

Query: 61  -SQRPWSSRSQNFGISE----------LDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
              R       NF I +          L L+YTVISVGKKGN+YFLRRPYIPVDK+LE G
Sbjct: 133 TGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLEAG 192

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQA+A DVFSLF+SEEVDKVELLYTKFVSLVKS+PVIHTLLPLSPKGEICD+N
Sbjct: 193 TLPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDIN 252

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G CVDAAEDEFFRLTTKEGKLTVER++ RT T DFSP L+FEQDPVQILDALLPLYLNSQ
Sbjct: 253 GTCVDAAEDEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQ 312

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BLAST of CmaCh18G002590 vs. ExPASy Swiss-Prot
Match: P29790 (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPC PE=1 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 9.4e-90
Identity = 194/294 (65.99%), Postives = 210/294 (71.43%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDP--------------------------------------- 60
           MKLVAAAKVRRAQEAVV   P                                       
Sbjct: 77  MKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDVPLTKVRPVKKVALVVV 136

Query: 61  -SQRPWSSRSQNFGISE----------LDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
              R       N+ I +          L +DYT+ISVGKKGN+YF+RRPYIPVDKFLEG 
Sbjct: 137 TGDRGLCGGFNNYLIKKAEARIRDLKALGIDYTIISVGKKGNSYFIRRPYIPVDKFLEGS 196

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
            LPTAK+AQAIA DVFSLFVSEEVDKVELLYTKFVSLVKS+PVIHTLLPLSPKGEICD+N
Sbjct: 197 NLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDIN 256

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G CVDAA DEFFRLTTKEGKLTVERD +RT TTDFSP L+FEQDPVQILDALLPLYLNSQ
Sbjct: 257 GNCVDAANDEFFRLTTKEGKLTVERDIIRTKTTDFSPILQFEQDPVQILDALLPLYLNSQ 316

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BLAST of CmaCh18G002590 vs. ExPASy Swiss-Prot
Match: P05435 (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPC PE=1 SV=2)

HSP 1 Score: 317.4 bits (812), Expect = 1.4e-85
Identity = 186/298 (62.42%), Postives = 209/298 (70.13%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDPSQRPWS--------------------------------- 60
           MKLVAAAKVRRAQEAVV    + RP+S                                 
Sbjct: 64  MKLVAAAKVRRAQEAVV----NGRPFSETLVEVLYNMNEQLQTEDVDVPLTKIRTVKKVA 123

Query: 61  ---------------------SRSQNFGISELDLDYTVISVGKKGNTYFLRRPYIPVDKF 120
                                + S+   + +L +DYT+IS+GKKGNTYF+RRP IPVD++
Sbjct: 124 LMVVTGDRGLCGGFNNMLLKKAESRIAELKKLGVDYTIISIGKKGNTYFIRRPEIPVDRY 183

Query: 121 LEGGTLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEI 180
            +G  LPTAKEAQAIA DVFSLFVSEEVDKVE+LYTKFVSLVKSDPVIHTLLPLSPKGEI
Sbjct: 184 FDGTNLPTAKEAQAIADDVFSLFVSEEVDKVEMLYTKFVSLVKSDPVIHTLLPLSPKGEI 243

Query: 181 CDVNGICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLY 238
           CD+NG CVDAAEDE FRLTTKEGKLTVERD ++T T  FSP LEFEQDP QILDALLPLY
Sbjct: 244 CDINGKCVDAAEDELFRLTTKEGKLTVERDMIKTETPAFSPILEFEQDPAQILDALLPLY 303

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BLAST of CmaCh18G002590 vs. ExPASy Swiss-Prot
Match: P28552 (ATP synthase gamma chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPC PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.1e-85
Identity = 188/294 (63.95%), Postives = 208/294 (70.75%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVV------------------------MEDP--SQRP--------- 60
           MKLVAAAKVRRAQEAVV                        +E P    RP         
Sbjct: 74  MKLVAAAKVRRAQEAVVNGRPFSETLVEVLYSINEQLQTDDIESPLTKLRPVKKVALVVC 133

Query: 61  ---------------WSSRSQNFGISELDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                            + ++   + EL L+YTV+SVG+KGN+YF RRPYIPVD+FLEGG
Sbjct: 134 TGDRGLCGGFNNAILKKAEARIAELKELGLEYTVVSVGRKGNSYFNRRPYIPVDRFLEGG 193

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           +LPTAKEAQ IA DVFSLFVSEEVDKVELLYTKFVSLVKS+P+IHTLLPLSPKGEICD+N
Sbjct: 194 SLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSNPIIHTLLPLSPKGEICDIN 253

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G CVDAAEDE FRLTTKEGKLTVERD +R+ T DFSP L+FEQDPVQILDALLPLYLNSQ
Sbjct: 254 GNCVDAAEDELFRLTTKEGKLTVERDVIRSKTVDFSPILQFEQDPVQILDALLPLYLNSQ 313

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BLAST of CmaCh18G002590 vs. ExPASy Swiss-Prot
Match: P0C1M0 (ATP synthase subunit gamma, chloroplastic OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-79
Identity = 174/298 (58.39%), Postives = 203/298 (68.12%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDPSQRPWS--------------------------------- 60
           MKLVAAAKVRRAQEAVV    S RP+S                                 
Sbjct: 58  MKLVAAAKVRRAQEAVV----SSRPFSEALVEVLYNMNQEIQTEDIDLPLTRTRPVKKVA 117

Query: 61  ---------------------SRSQNFGISELDLDYTVISVGKKGNTYFLRRPYIPVDKF 120
                                + ++   + +L L YTV+SVGKKGN YF RRPYIP+++ 
Sbjct: 118 LVVLTGERGLCGSFNNNVLKKAETRIDELKQLGLQYTVVSVGKKGNAYFQRRPYIPLERD 177

Query: 121 LEGGTLPTAKEAQAIAD-VFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEI 180
           LE  ++PT K++QAI D V+SLFVSEEVDKVELLY+KFVSLV+SDP+I TLLP+SPKGEI
Sbjct: 178 LEVSSVPTVKDSQAICDLVYSLFVSEEVDKVELLYSKFVSLVRSDPIIQTLLPMSPKGEI 237

Query: 181 CDVNGICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLY 238
           CDVNG+CVDA EDE FRLTTKEGKLTVER+ V+  T  FSP ++FEQDPVQILDALLPLY
Sbjct: 238 CDVNGVCVDATEDELFRLTTKEGKLTVEREKVKIETQPFSPVVQFEQDPVQILDALLPLY 297

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BLAST of CmaCh18G002590 vs. ExPASy TrEMBL
Match: A0A5A7UNR3 (ATP synthase gamma chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005740 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 5.0e-94
Identity = 210/294 (71.43%), Postives = 219/294 (74.49%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDP--------------------------SQRPWSS------ 60
           MKLVAAAKVRRAQEAVV   P                            RP         
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 132

Query: 61  ---------------RSQNFGISE---LDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                          +     ISE   L LDYTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 133 TGDRGLCGGFNNTIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGG 192

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD+N
Sbjct: 193 TLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDIN 252

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERDSVRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 253 GVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 312

[Close]

BLAST of CmaCh18G002590 vs. ExPASy TrEMBL
Match: E5GC53 (ATP synthase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 5.0e-94
Identity = 210/294 (71.43%), Postives = 219/294 (74.49%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDP--------------------------SQRPWSS------ 60
           MKLVAAAKVRRAQEAVV   P                            RP         
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 132

Query: 61  ---------------RSQNFGISE---LDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                          +     ISE   L LDYTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 133 TGDRGLCGGFNNTIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGG 192

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD+N
Sbjct: 193 TLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDIN 252

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERDSVRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 253 GVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 312

[Close]

BLAST of CmaCh18G002590 vs. ExPASy TrEMBL
Match: A0A1S3B3B4 (ATP synthase gamma chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485280 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 5.0e-94
Identity = 210/294 (71.43%), Postives = 219/294 (74.49%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDP--------------------------SQRPWSS------ 60
           MKLVAAAKVRRAQEAVV   P                            RP         
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 132

Query: 61  ---------------RSQNFGISE---LDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                          +     ISE   L LDYTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 133 TGDRGLCGGFNNTIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGG 192

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD+N
Sbjct: 193 TLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDIN 252

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERDSVRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 253 GVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 312

[Close]

BLAST of CmaCh18G002590 vs. ExPASy TrEMBL
Match: A0A0A0LS08 (ATP synthase gamma chain OS=Cucumis sativus OX=3659 GN=Csa_1G062930 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.6e-94
Identity = 206/294 (70.07%), Postives = 215/294 (73.13%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDPSQRPWSSRSQNFG-------------------------- 60
           MKLVAAAKVRRAQEAVV   P          N                            
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 132

Query: 61  ------------------------ISELDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                                   +  L LDYTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 133 TGDRGLCGGFNNSIIKKAEARIKELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGG 192

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD+N
Sbjct: 193 TLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDIN 252

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERDSVRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 253 GVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 312

[Close]

BLAST of CmaCh18G002590 vs. ExPASy TrEMBL
Match: A0A6J1E8F8 (ATP synthase gamma chain, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431710 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.6e-94
Identity = 205/294 (69.73%), Postives = 216/294 (73.47%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDPSQRPWSSRSQNFG-------------------------- 60
           MKLVAAAKVRRAQEAVV   P          N                            
Sbjct: 76  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 135

Query: 61  ------------------------ISELDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                                   + EL L+YTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 136 TGDRGLCGGFNNAIIKKAEARISELKELGLEYTVISVGKKGNSYFLRRPYIPVDKFLEGG 195

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLF+SEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD+N
Sbjct: 196 TLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDIN 255

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERD+VRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 256 GVCVDAAEDEFFRLTTKEGKLTVERDTVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 315

[Close]

BLAST of CmaCh18G002590 vs. NCBI nr
Match: XP_008441056.1 (PREDICTED: ATP synthase gamma chain, chloroplastic [Cucumis melo] >ADN34052.1 ATP synthase [Cucumis melo subsp. melo] >KAA0056854.1 ATP synthase gamma chain [Cucumis melo var. makuwa] >TYJ99357.1 ATP synthase gamma chain [Cucumis melo var. makuwa])

HSP 1 Score: 354.0 bits (907), Expect = 1.0e-93
Identity = 210/294 (71.43%), Postives = 219/294 (74.49%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDP--------------------------SQRPWSS------ 60
           MKLVAAAKVRRAQEAVV   P                            RP         
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 132

Query: 61  ---------------RSQNFGISE---LDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                          +     ISE   L LDYTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 133 TGDRGLCGGFNNTIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGG 192

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD+N
Sbjct: 193 TLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDIN 252

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERDSVRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 253 GVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 312

[Close]

BLAST of CmaCh18G002590 vs. NCBI nr
Match: XP_004145113.1 (ATP synthase gamma chain, chloroplastic [Cucumis sativus] >KGN64518.1 hypothetical protein Csa_013740 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 206/294 (70.07%), Postives = 215/294 (73.13%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDPSQRPWSSRSQNFG-------------------------- 60
           MKLVAAAKVRRAQEAVV   P          N                            
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 132

Query: 61  ------------------------ISELDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                                   +  L LDYTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 133 TGDRGLCGGFNNSIIKKAEARIKELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGG 192

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD+N
Sbjct: 193 TLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDIN 252

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERDSVRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 253 GVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 312

[Close]

BLAST of CmaCh18G002590 vs. NCBI nr
Match: XP_022924189.1 (ATP synthase gamma chain, chloroplastic [Cucurbita moschata] >KAG7019689.1 ATP synthase gamma chain, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 205/294 (69.73%), Postives = 216/294 (73.47%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDPSQRPWSSRSQNFG-------------------------- 60
           MKLVAAAKVRRAQEAVV   P          N                            
Sbjct: 76  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 135

Query: 61  ------------------------ISELDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                                   + EL L+YTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 136 TGDRGLCGGFNNAIIKKAEARISELKELGLEYTVISVGKKGNSYFLRRPYIPVDKFLEGG 195

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLF+SEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD+N
Sbjct: 196 TLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDIN 255

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERD+VRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 256 GVCVDAAEDEFFRLTTKEGKLTVERDTVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 315

[Close]

BLAST of CmaCh18G002590 vs. NCBI nr
Match: XP_038894116.1 (ATP synthase gamma chain, chloroplastic [Benincasa hispida])

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 209/294 (71.09%), Postives = 219/294 (74.49%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDP--------------------------SQRPWSS------ 60
           MKLVAAAKVRRAQEAVV   P                            RP         
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 132

Query: 61  ---------------RSQNFGISE---LDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                          +     ISE   L LDYTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 133 TGDRGLCGGFNNTIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGG 192

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLFVSEEVDKVELLYTKFVSL+KSDPVIHTLLPLSPKGEICD+N
Sbjct: 193 TLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLIKSDPVIHTLLPLSPKGEICDIN 252

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERDSVRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 253 GVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 312

[Close]

BLAST of CmaCh18G002590 vs. NCBI nr
Match: XP_023519750.1 (ATP synthase gamma chain, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.4 bits (903), Expect = 3.0e-93
Identity = 204/294 (69.39%), Postives = 216/294 (73.47%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDPSQRPWSSRSQNFG-------------------------- 60
           MKLVAAAKVRRAQEAVV   P          N                            
Sbjct: 76  MKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVV 135

Query: 61  ------------------------ISELDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
                                   + EL L+YTVISVGKKGN+YFLRRPYIPVDKFLEGG
Sbjct: 136 TGDRGLCGGFNNSIIKKAEARISELKELGLEYTVISVGKKGNSYFLRRPYIPVDKFLEGG 195

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQAIA DVFSLF+SEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD+N
Sbjct: 196 TLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDIN 255

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G+CVDAAEDEFFRLTTKEGKLTVERD+VRTST+DFSP LEFEQDPVQILDALLPLYLNSQ
Sbjct: 256 GVCVDAAEDEFFRLTTKEGKLTVERDTVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQ 315

[Close]

BLAST of CmaCh18G002590 vs. TAIR 10
Match: AT4G04640.1 (ATPase, F1 complex, gamma subunit protein )

HSP 1 Score: 331.3 bits (848), Expect = 6.7e-91
Identity = 193/294 (65.65%), Postives = 213/294 (72.45%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDP--------------------------------------- 60
           MKLVAAAKVRRAQEAVV   P                                       
Sbjct: 73  MKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVV 132

Query: 61  -SQRPWSSRSQNFGISE----------LDLDYTVISVGKKGNTYFLRRPYIPVDKFLEGG 120
              R       NF I +          L L+YTVISVGKKGN+YFLRRPYIPVDK+LE G
Sbjct: 133 TGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLEAG 192

Query: 121 TLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVN 180
           TLPTAKEAQA+A DVFSLF+SEEVDKVELLYTKFVSLVKS+PVIHTLLPLSPKGEICD+N
Sbjct: 193 TLPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDIN 252

Query: 181 GICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNSQ 238
           G CVDAAEDEFFRLTTKEGKLTVER++ RT T DFSP L+FEQDPVQILDALLPLYLNSQ
Sbjct: 253 GTCVDAAEDEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQ 312

[Close]

BLAST of CmaCh18G002590 vs. TAIR 10
Match: AT1G15700.1 (ATPase, F1 complex, gamma subunit protein )

HSP 1 Score: 260.4 bits (664), Expect = 1.5e-69
Identity = 159/295 (53.90%), Postives = 188/295 (63.73%), Query Frame = 0


Query: 1   MKLVAAAKVRRAQEAVVMEDPSQRP----WSSRSQNFGISELD----------------- 60
           M+LVAAA+VRRAQ+AV+   P          S +Q+  + ++D                 
Sbjct: 83  MRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVV 142

Query: 61  -----------------------------LDYTVISVGKKGNTYFLRRPYIPVDKFLE-G 120
                                        +D  VISVGKKGN YF RR    VDK +E G
Sbjct: 143 TGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIEGG 202

Query: 121 GTLPTAKEAQAIA-DVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDV 180
           G  PT KEAQ IA DVFSLFVSEEVDKVEL+YTKFVSLVKSDPVIHTLLPLS KGE CDV
Sbjct: 203 GVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDV 262

Query: 181 NGICVDAAEDEFFRLTTKEGKLTVERDSVRTSTTDFSPSLEFEQDPVQILDALLPLYLNS 238
            G CVDA EDE FRLT+K+GKL VER  +     + SP ++FEQDPVQILDA++PLYLNS
Sbjct: 263 KGECVDAIEDEMFRLTSKDGKLAVERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNS 322

The following BLAST results are available for this feature:

BLAST of CmaCh18G002590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q01908	9.4e-90	65.65	ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATP...	[more]
P29790	9.4e-90	65.99	ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum OX=4097 GN=ATPC PE=...	[more]
P05435	1.4e-85	62.42	ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPC PE=...	[more]
P28552	3.1e-85	63.95	ATP synthase gamma chain, chloroplastic OS=Pisum sativum OX=3888 GN=ATPC PE=2 SV...	[more]
P0C1M0	2.0e-79	58.39	ATP synthase subunit gamma, chloroplastic OS=Zea mays OX=4577 PE=1 SV=1	[more]

BLAST of CmaCh18G002590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNR3	5.0e-94	71.43	ATP synthase gamma chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
E5GC53	5.0e-94	71.43	ATP synthase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3B3B4	5.0e-94	71.43	ATP synthase gamma chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485280 ...	[more]
A0A0A0LS08	6.6e-94	70.07	ATP synthase gamma chain OS=Cucumis sativus OX=3659 GN=Csa_1G062930 PE=3 SV=1	[more]
A0A6J1E8F8	6.6e-94	69.73	ATP synthase gamma chain, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of CmaCh18G002590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441056.1	1.0e-93	71.43	PREDICTED: ATP synthase gamma chain, chloroplastic [Cucumis melo] >ADN34052.1 AT...	[more]
XP_004145113.1	1.4e-93	70.07	ATP synthase gamma chain, chloroplastic [Cucumis sativus] >KGN64518.1 hypothetic...	[more]
XP_022924189.1	1.4e-93	69.73	ATP synthase gamma chain, chloroplastic [Cucurbita moschata] >KAG7019689.1 ATP s...	[more]
XP_038894116.1	1.4e-93	71.09	ATP synthase gamma chain, chloroplastic [Benincasa hispida]	[more]
XP_023519750.1	3.0e-93	69.39	ATP synthase gamma chain, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh18G002590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04640.1	6.7e-91	65.65	ATPase, F1 complex, gamma subunit protein	[more]
AT1G15700.1	1.5e-69	53.90	ATPase, F1 complex, gamma subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000131	ATP synthase, F1 complex, gamma subunit	PRINTS	PR00126	ATPASEGAMMA	coord: 94..111 score: 40.67 coord: 221..242 score: 37.45
IPR000131	ATP synthase, F1 complex, gamma subunit	PFAM	PF00231	ATP-synt	coord: 41..233 e-value: 5.1E-33 score: 115.0
IPR000131	ATP synthase, F1 complex, gamma subunit	PANTHER	PTHR11693	ATP SYNTHASE GAMMA CHAIN	coord: 1..18 coord: 36..234
IPR000131	ATP synthase, F1 complex, gamma subunit	CDD	cd12151	F1-ATPase_gamma	coord: 1..233 e-value: 1.33933E-51 score: 167.369
None	No IPR available	GENE3D	3.40.1380.10		coord: 27..120 e-value: 3.6E-14 score: 55.0
None	No IPR available	GENE3D	1.10.287.80	ATP synthase, gamma subunit, helix hairpin domain	coord: 144..237 e-value: 3.6E-15 score: 58.6
None	No IPR available	PANTHER	PTHR11693:SF23	ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC	coord: 1..18 coord: 36..234
IPR035968	ATP synthase, F1 complex, gamma subunit superfamily	SUPERFAMILY	52943	ATP synthase (F1-ATPase), gamma subunit	coord: 1..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G002590.1	CmaCh18G002590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism