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CmaCh18G002520 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTATTTTGATGAAACGCATGCAAAATGGGTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAGGCACAGACAAGCTCTGTTCTTGATTTACAAGATAATGGAGCAGGCAACCAATGGAAATGGCAATGCCAATGGCCACAGGAGGAGGTCTTCTTGTCTCAGAATCAAAACACGAAAGCTTAGGCTAAGGATTGGAAGGAGGTTGAAGAAGCTGAAGAAGGCCATGTCAATGTGTCTGTCCACAGCAAGAATTGGGCTCTGCAACCAATTTCAACAGCTTAGAACTTGTAAGAGCGCGCTGCGACGACGACCCAAGGTGGAAGCTTTGGCCTTTCCTTCTTTGGTCACTTAA ATGAGTATTTTGATGAAACGCATGCAAAATGGGTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAGGCACAGACAAGCTCTGTTCTTGATTTACAAGATAATGGAGCAGGCAACCAATGGAAATGGCAATGCCAATGGCCACAGGAGGAGGTCTTCTTGTCTCAGAATCAAAACACGAAAGCTTAGGCTAAGGATTGGAAGGAGGTTGAAGAAGCTGAAGAAGGCCATGTCAATGTGTCTGTCCACAGCAAGAATTGGGCTCTGCAACCAATTTCAACAGCTTAGAACTTGTAAGAGCGCGCTGCGACGACGACCCAAGGTGGAAGCTTTGGCCTTTCCTTCTTTGGTCACTTAA ATGAGTATTTTGATGAAACGCATGCAAAATGGGTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAGGCACAGACAAGCTCTGTTCTTGATTTACAAGATAATGGAGCAGGCAACCAATGGAAATGGCAATGCCAATGGCCACAGGAGGAGGTCTTCTTGTCTCAGAATCAAAACACGAAAGCTTAGGCTAAGGATTGGAAGGAGGTTGAAGAAGCTGAAGAAGGCCATGTCAATGTGTCTGTCCACAGCAAGAATTGGGCTCTGCAACCAATTTCAACAGCTTAGAACTTGTAAGAGCGCGCTGCGACGACGACCCAAGGTGGAAGCTTTGGCCTTTCCTTCTTTGGTCACTTAA MSILMKRMQNGYSRMEKEDPEEKRHRQALFLIYKIMEQATNGNGNANGHRRRSSCLRIKTRKLRLRIGRRLKKLKKAMSMCLSTARIGLCNQFQQLRTCKSALRRRPKVEALAFPSLVT Homology
BLAST of CmaCh18G002520 vs. ExPASy TrEMBL
Match: A0A6J1KG77 (uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 5.4e-33 Identity = 87/119 (73.11%), Postives = 94/119 (78.99%), Query Frame = 0
BLAST of CmaCh18G002520 vs. ExPASy TrEMBL
Match: A0A6J1CEK3 (uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010796 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.6e-32 Identity = 80/119 (67.23%), Postives = 95/119 (79.83%), Query Frame = 0
BLAST of CmaCh18G002520 vs. ExPASy TrEMBL
Match: A0A0A0LUT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 6.8e-28 Identity = 75/117 (64.10%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of CmaCh18G002520 vs. ExPASy TrEMBL
Match: A0A7J6HWJ0 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_027202 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of CmaCh18G002520 vs. ExPASy TrEMBL
Match: A0A803NZN2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of CmaCh18G002520 vs. NCBI nr
Match: KAG6573192.1 (hypothetical protein SDJN03_27079, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202.2 bits (513), Expect = 2.5e-48 Identity = 103/119 (86.55%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of CmaCh18G002520 vs. NCBI nr
Match: KAG7012370.1 (hypothetical protein SDJN02_25122, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 187.2 bits (474), Expect = 8.3e-44 Identity = 100/121 (82.64%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of CmaCh18G002520 vs. NCBI nr
Match: XP_023542186.1 (uncharacterized protein LOC111802152 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 182.6 bits (462), Expect = 2.0e-42 Identity = 96/109 (88.07%), Postives = 101/109 (92.66%), Query Frame = 0
BLAST of CmaCh18G002520 vs. NCBI nr
Match: KAG6584084.1 (hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 151.0 bits (380), Expect = 6.6e-33 Identity = 87/119 (73.11%), Postives = 96/119 (80.67%), Query Frame = 0
BLAST of CmaCh18G002520 vs. NCBI nr
Match: XP_023001322.1 (uncharacterized protein LOC111495486 [Cucurbita maxima]) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32 Identity = 87/119 (73.11%), Postives = 94/119 (78.99%), Query Frame = 0
BLAST of CmaCh18G002520 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 4.6e-08 Identity = 33/78 (42.31%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of CmaCh18G002520 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 9.5e-06 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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