CmaCh18G002360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G002360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	LEA_2 domain-containing protein
Location	Cma_Chr18: 1255067 .. 1255579 (-)
RNA-Seq Expression	CmaCh18G002360
Synteny	CmaCh18G002360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCAAAAACGCCTCCAAATGCGAGTTTACTATATACTTATGGTTCCTACAAGTTCTAATAATTCTAGGGTTAGCCTCTTTAGCCATATGGGCGAGCCTAATCCCCAAGAAGCCTATCTTCATCATCTCCAATATGGATTTGAAGCCATATCAAAACGGTAGCGCTAGCTCTTCCTTAGCATTGAATGTGACGATCTCAAACCCCAACAAAATGGTTGGTGTCTTCTTCGATGAGCTTAATGTAACGGTACGTTGCAAGAACGAGAGTGTCGGGTCGAGCTCGATGTCGGGATTTTATTTGGAAAGCAAGAGAATTGATGTGCATGAGGTTGAGTTGGGTGTGAATGGGTTGTGTGGGAAGGTGGATTTGAGAGTTGGGTTAGTGACGAGTGTTGGATATAAGATTATGTGGTTCAAGACAAAGCATCGAGGGTTGGTTTTGGAAGATTGTGTTCATATTGGTCCTGATGGGCAAATGGTGGGAACAAGAGAAATGAAGTTGAGCTAA

mRNA sequence

ATGGCTGCCAAAAACGCCTCCAAATGCGAGTTTACTATATACTTATGGTTCCTACAAGTTCTAATAATTCTAGGGTTAGCCTCTTTAGCCATATGGGCGAGCCTAATCCCCAAGAAGCCTATCTTCATCATCTCCAATATGGATTTGAAGCCATATCAAAACGGTAGCGCTAGCTCTTCCTTAGCATTGAATGTGACGATCTCAAACCCCAACAAAATGGTTGGTGTCTTCTTCGATGAGCTTAATGTAACGGTACGTTGCAAGAACGAGAGTGTCGGGTCGAGCTCGATGTCGGGATTTTATTTGGAAAGCAAGAGAATTGATGTGCATGAGGTTGAGTTGGGTGTGAATGGGTTGTGTGGGAAGGTGGATTTGAGAGTTGGGTTAGTGACGAGTGTTGGATATAAGATTATGTGGTTCAAGACAAAGCATCGAGGGTTGGTTTTGGAAGATTGTGTTCATATTGGTCCTGATGGGCAAATGGTGGGAACAAGAGAAATGAAGTTGAGCTAA

Coding sequence (CDS)

ATGGCTGCCAAAAACGCCTCCAAATGCGAGTTTACTATATACTTATGGTTCCTACAAGTTCTAATAATTCTAGGGTTAGCCTCTTTAGCCATATGGGCGAGCCTAATCCCCAAGAAGCCTATCTTCATCATCTCCAATATGGATTTGAAGCCATATCAAAACGGTAGCGCTAGCTCTTCCTTAGCATTGAATGTGACGATCTCAAACCCCAACAAAATGGTTGGTGTCTTCTTCGATGAGCTTAATGTAACGGTACGTTGCAAGAACGAGAGTGTCGGGTCGAGCTCGATGTCGGGATTTTATTTGGAAAGCAAGAGAATTGATGTGCATGAGGTTGAGTTGGGTGTGAATGGGTTGTGTGGGAAGGTGGATTTGAGAGTTGGGTTAGTGACGAGTGTTGGATATAAGATTATGTGGTTCAAGACAAAGCATCGAGGGTTGGTTTTGGAAGATTGTGTTCATATTGGTCCTGATGGGCAAATGGTGGGAACAAGAGAAATGAAGTTGAGCTAA

Protein sequence

MAAKNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQNGSASSSLALNVTISNPNKMVGVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDVHEVELGVNGLCGKVDLRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIGPDGQMVGTREMKLS

Homology

[Close]

BLAST of CmaCh18G002360 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 18  LQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQ---NGSASSSLALNVTISNPNKMV 77
           + V +ILG+A+L +W    P    F +++ +L  +    N +   SL LN TI NPN+ V
Sbjct: 60  IAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRV 119

Query: 78  GVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDV 110
           GV++DE +V+    ++  GS+++S FY   K   V
Sbjct: 120 GVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTV 154

[Close]

BLAST of CmaCh18G002360 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 5.6e-04
Identity = 24/96 (25.00%), Postives = 51/96 (53.12%), Query Frame = 0


Query: 18  LQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQNGSASS----SLALNVTISNPNKM 77
           + +++ILG+A+L  W  + P+   F +++  L  + + S  +    +LAL V + NPNK 
Sbjct: 46  ISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKR 105

Query: 78  VGVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDV 110
           +G+++D +      + +   + +++ FY   K   V
Sbjct: 106 IGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTV 141

[Close]

BLAST of CmaCh18G002360 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.3e-04
Identity = 30/101 (29.70%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 13  IYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPY---QNGSASSSLALNVTISN 72
           I+   + + ++LG+A+L IW    P    F +++  L  +      +   +L LN TI N
Sbjct: 48  IFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRN 107

Query: 73  PNKMVGVFFDELNVTVRCKNESVG-SSSMSGFYLESKRIDV 110
           PN+ +GV++DE+ V     ++  G S+++S FY   K   V
Sbjct: 108 PNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTV 148

[Close]

BLAST of CmaCh18G002360 vs. ExPASy TrEMBL
Match: A0A6J1CHD2 (cysteine-rich receptor-like protein kinase 10 OS=Momordica charantia OX=3673 GN=LOC111010883 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 5.7e-44
Identity = 94/156 (60.26%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 4   KNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQNGSA----SS 63
           K   KCE ++Y+WFLQV+ +LGL SLAIWAS+ PK P F ISN+DLKP+QN +A    SS
Sbjct: 9   KTFPKCETSVYIWFLQVVTVLGLTSLAIWASITPKTPTFAISNLDLKPHQNDTAFARSSS 68

Query: 64  SLALNVTISNPNKMVGVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDVHEVELGVN-- 123
            +ALN+T+SNPN+M G+FFDE+NVTVRCKN+SVG+ S+ GFYL  +  D  EVE+ VN  
Sbjct: 69  VVALNMTVSNPNRMAGIFFDEINVTVRCKNDSVGAKSVPGFYLGHESSDWKEVEMSVNCG 128

Query: 124 GLCGKVDLRVGLVTSVGYKIMWFKTKHRGLVLEDCV 154
              G+VDLRVGL T V YKI+ FK+++R LV EDCV
Sbjct: 129 AADGRVDLRVGLETRVRYKILRFKSRNRRLVFEDCV 164

[Close]

BLAST of CmaCh18G002360 vs. ExPASy TrEMBL
Match: A0A1S3B3M5 (NDR1/HIN1-Like protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485604 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 6.3e-43
Identity = 108/186 (58.06%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 1   MAAKNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQN-----G 60
           M +K  S C+  IY+WFLQVL IL LASLAIWA+L PK P F I+NMDLKPY       G
Sbjct: 1   MTSKRGSHCD--IYIWFLQVLTILVLASLAIWATLTPKTPTFTITNMDLKPYIRNDTVLG 60

Query: 61  SASSSLALNVTISNPNKMVGVFFDELNVTVRCKNESV-----GSSSMSGFYLESKRIDVH 120
           + SS LA NVTISNPNKM GVF DE+NVT+ C NESV      S S++GFYL     D+ 
Sbjct: 61  TNSSFLAFNVTISNPNKMTGVFLDEINVTIGCNNESVTGSRSWSKSVAGFYLGHSVSDLK 120

Query: 121 EVELGVNG----LCGKVD--LRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIG-PDGQMVG 170
           EV+L V      LC KVD  L+V L T V YK+MWFKT+HR LV ED V IG   GQM+G
Sbjct: 121 EVDLSVEDNELLLCRKVDYYLKVELETGVRYKVMWFKTRHRRLVFEDYVEIGYGHGQMLG 180

[Close]

BLAST of CmaCh18G002360 vs. ExPASy TrEMBL
Match: A0A5D3BKC2 (NDR1/HIN1-Like protein 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006070 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 6.3e-43
Identity = 108/186 (58.06%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 1   MAAKNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQN-----G 60
           M +K  S C+  IY+WFLQVL IL LASLAIWA+L PK P F I+NMDLKPY       G
Sbjct: 1   MTSKRGSHCD--IYIWFLQVLTILVLASLAIWATLTPKTPTFTITNMDLKPYIRNDTVLG 60

Query: 61  SASSSLALNVTISNPNKMVGVFFDELNVTVRCKNESV-----GSSSMSGFYLESKRIDVH 120
           + SS LA NVTISNPNKM GVF DE+NVT+ C NESV      S S++GFYL     D+ 
Sbjct: 61  TNSSFLAFNVTISNPNKMTGVFLDEINVTIGCNNESVTGSRSWSKSVAGFYLGHSVSDLK 120

Query: 121 EVELGVNG----LCGKVD--LRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIG-PDGQMVG 170
           EV+L V      LC KVD  L+V L T V YK+MWFKT+HR LV ED V IG   GQM+G
Sbjct: 121 EVDLSVEDNELLLCRKVDYYLKVELETGVRYKVMWFKTRHRRLVFEDYVEIGYGHGQMLG 180

[Close]

BLAST of CmaCh18G002360 vs. ExPASy TrEMBL
Match: A0A0A0LRN3 (Harpin inducing protein 1-like 9 OS=Cucumis sativus OX=3659 GN=Csa_1G064770 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.0e-40
Identity = 103/175 (58.86%), Postives = 122/175 (69.71%), Query Frame = 0


Query: 13  IYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPY-QNGSA-----SSSLALNVT 72
           IY+WFLQVL IL LA LAIWA+L P+ P F I+NMDLKPY +N +A     SS LA NVT
Sbjct: 12  IYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLAFNVT 71

Query: 73  ISNPNKMVGVFFDELNVTVRCKNESV-----GSSSMSGFYLESKRIDVHEVELGVN---- 132
           ISNPNKM+GVF DE+NVT+ C NES+      S SM+GFYL     D+ EV+L V+    
Sbjct: 72  ISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLKEVDLSVDDNEL 131

Query: 133 GLCGKVD--LRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIG-PDGQMVGTREMKL 170
            LC KVD  LRVG+ T V YKIMWF T+H GLV ED + IG   GQM+GT +MKL
Sbjct: 132 SLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLGTTQMKL 186

[Close]

BLAST of CmaCh18G002360 vs. ExPASy TrEMBL
Match: A0A5A7URJ4 (NDR1/HIN1-Like protein 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00550 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.6e-28
Identity = 81/151 (53.64%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 1   MAAKNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQN-----G 60
           M +K  S C+  IY+WFLQVL IL LASLAIWA+L PK P F I+NMDLKPY       G
Sbjct: 1   MTSKRGSHCD--IYIWFLQVLTILVLASLAIWATLTPKTPTFTITNMDLKPYIRNDTVLG 60

Query: 61  SASSSLALNVTISNPNKMVGVFFDELNVTVRCKNESV-----GSSSMSGFYLESKRIDVH 120
           + SS LA NVTISNPNKM GVF DE+NVT+ C NESV      S S++GFYL     D+ 
Sbjct: 61  TNSSFLAFNVTISNPNKMTGVFLDEINVTIGCNNESVTGSRSWSKSVAGFYLGHSVSDLK 120

Query: 121 EVELGVNG----LCGKVDLRVGLVTSVGYKI 138
           EV+L V      LC KVD  + + T+  ++I
Sbjct: 121 EVDLSVEDNELLLCRKVDYYLKVDTTRKWRI 149

[Close]

BLAST of CmaCh18G002360 vs. NCBI nr
Match: KAG6573211.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 311.6 bits (797), Expect = 4.1e-81
Identity = 152/161 (94.41%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MAAKNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQNGSASSS 60
           M AKNASKCEF+IY+WFLQVL +LGLASLAIWASLIP KPIF+ISNMDLKPYQNGSASSS
Sbjct: 1   MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPTKPIFMISNMDLKPYQNGSASSS 60

Query: 61  LALNVTISNPNKMVGVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDVHEVELGVNGLC 120
           LALNVTISNPNKMVGVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDVHEVELGVNGLC
Sbjct: 61  LALNVTISNPNKMVGVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDVHEVELGVNGLC 120

Query: 121 GKVDLRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIGPDGQM 162
           GKVDLRVGL TSVGYKIMWFKTKHRGLVLEDCVHIGPDGQ+
Sbjct: 121 GKVDLRVGLATSVGYKIMWFKTKHRGLVLEDCVHIGPDGQV 161

[Close]

BLAST of CmaCh18G002360 vs. NCBI nr
Match: KAG7012385.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273.5 bits (698), Expect = 1.3e-69
Identity = 139/159 (87.42%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 1   MAAKNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQNGSASSS 60
           M AKNASKCEF+IY+WFLQVL +LGLASLAIWASLIPKKPIF+ISNMDLKPYQNGSASSS
Sbjct: 1   MEAKNASKCEFSIYIWFLQVLTVLGLASLAIWASLIPKKPIFMISNMDLKPYQNGSASSS 60

Query: 61  LALNVTISNPNKMVGVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDVHEVELGVNGLC 120
           LALNVTISNPNKMVGVFFDELN      NESVGSSSMSGFYLESKRIDVHEVELGVNGLC
Sbjct: 61  LALNVTISNPNKMVGVFFDELN------NESVGSSSMSGFYLESKRIDVHEVELGVNGLC 120

Query: 121 GKVDLRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIGPDG 160
           GKVDLRVGLVTSVGYKIMWFKTKHRG V+    H  PDG
Sbjct: 121 GKVDLRVGLVTSVGYKIMWFKTKHRGFVIHGSAH-NPDG 152

[Close]

BLAST of CmaCh18G002360 vs. NCBI nr
Match: XP_038895943.1 (uncharacterized protein LOC120084116 [Benincasa hispida])

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-54
Identity = 124/183 (67.76%), Postives = 137/183 (74.86%), Query Frame = 0


Query: 2   AAKNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQNGSA---- 61
           AAK  S CE +IY+WFLQVL ILGL SLAIWA+L PK PIF ISNMDLKPYQN +     
Sbjct: 3   AAKRYSNCERSIYIWFLQVLTILGLVSLAIWATLTPKTPIFTISNMDLKPYQNDTILARN 62

Query: 62  SSSLALNVTISNPNKMVGVFFDELNVTVRCKNESV-----GSSSMSGFYLESKRIDVHEV 121
           SSSLALNVTISN N+MVG+FFDELN+T+ CKNES+      S S+SGFYL  K  D+ EV
Sbjct: 63  SSSLALNVTISNTNRMVGIFFDELNITIGCKNESIIGSRSWSRSVSGFYLGHKSSDLEEV 122

Query: 122 ELGV--NG--LCGKVD--LRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIGPDGQMVGTRE 170
           +LGV  NG  LCG VD  LRV L T V YKIMWFKTKHRGLV ED V IGP GQM GT +
Sbjct: 123 DLGVENNGLLLCGNVDYYLRVRLETGVRYKIMWFKTKHRGLVFEDYVQIGPGGQMQGTTQ 182

[Close]

BLAST of CmaCh18G002360 vs. NCBI nr
Match: XP_022140153.1 (cysteine-rich receptor-like protein kinase 10 [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-43
Identity = 94/156 (60.26%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 4   KNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQNGSA----SS 63
           K   KCE ++Y+WFLQV+ +LGL SLAIWAS+ PK P F ISN+DLKP+QN +A    SS
Sbjct: 9   KTFPKCETSVYIWFLQVVTVLGLTSLAIWASITPKTPTFAISNLDLKPHQNDTAFARSSS 68

Query: 64  SLALNVTISNPNKMVGVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDVHEVELGVN-- 123
            +ALN+T+SNPN+M G+FFDE+NVTVRCKN+SVG+ S+ GFYL  +  D  EVE+ VN  
Sbjct: 69  VVALNMTVSNPNRMAGIFFDEINVTVRCKNDSVGAKSVPGFYLGHESSDWKEVEMSVNCG 128

Query: 124 GLCGKVDLRVGLVTSVGYKIMWFKTKHRGLVLEDCV 154
              G+VDLRVGL T V YKI+ FK+++R LV EDCV
Sbjct: 129 AADGRVDLRVGLETRVRYKILRFKSRNRRLVFEDCV 164

[Close]

BLAST of CmaCh18G002360 vs. NCBI nr
Match: XP_008441503.1 (PREDICTED: NDR1/HIN1-Like protein 3-like isoform X2 [Cucumis melo] >XP_016899081.1 PREDICTED: NDR1/HIN1-Like protein 3-like isoform X1 [Cucumis melo] >TYJ99389.1 NDR1/HIN1-Like protein 3-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42
Identity = 108/186 (58.06%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 1   MAAKNASKCEFTIYLWFLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQN-----G 60
           M +K  S C+  IY+WFLQVL IL LASLAIWA+L PK P F I+NMDLKPY       G
Sbjct: 1   MTSKRGSHCD--IYIWFLQVLTILVLASLAIWATLTPKTPTFTITNMDLKPYIRNDTVLG 60

Query: 61  SASSSLALNVTISNPNKMVGVFFDELNVTVRCKNESV-----GSSSMSGFYLESKRIDVH 120
           + SS LA NVTISNPNKM GVF DE+NVT+ C NESV      S S++GFYL     D+ 
Sbjct: 61  TNSSFLAFNVTISNPNKMTGVFLDEINVTIGCNNESVTGSRSWSKSVAGFYLGHSVSDLK 120

Query: 121 EVELGVNG----LCGKVD--LRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIG-PDGQMVG 170
           EV+L V      LC KVD  L+V L T V YK+MWFKT+HR LV ED V IG   GQM+G
Sbjct: 121 EVDLSVEDNELLLCRKVDYYLKVELETGVRYKVMWFKTRHRRLVFEDYVEIGYGHGQMLG 180

[Close]

BLAST of CmaCh18G002360 vs. TAIR 10
Match: AT1G61760.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 58.9 bits (141), Expect = 4.5e-09
Identity = 38/170 (22.35%), Postives = 78/170 (45.88%), Query Frame = 0


Query: 17  FLQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQ--NGSASSSLALNVTISNPNKMV 76
           FL +L+ LG+ +  +W SL P +P   I    +      +G  +S ++  +T  NPN+ V
Sbjct: 48  FLSLLLCLGIITFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNV 107

Query: 77  GVFFDELNVTVRCKNESVGSSSMSG-FYLESKRIDVHEVELGVNGLC------------- 136
           G+++D +  +V  K + +GS+ ++  FY + K     +  L    +              
Sbjct: 108 GIYYDSMEGSVYYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDR 167

Query: 137 --GKVDLRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIGPDGQMVGTREMK 169
             GK+  R+ + + + +K+  + +K   +     + IG DG ++   + K
Sbjct: 168 NQGKIMFRLKVRSMIRFKVYTWHSKSHKMYASCYIEIGWDGMLLSATKDK 217

[Close]

BLAST of CmaCh18G002360 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 58.2 bits (139), Expect = 7.7e-09
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 18  LQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQ---NGSASSSLALNVTISNPNKMV 77
           + V +ILG+A+L +W    P    F +++ +L  +    N +   SL LN TI NPN+ V
Sbjct: 60  IAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRV 119

Query: 78  GVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDV 110
           GV++DE +V+    ++  GS+++S FY   K   V
Sbjct: 120 GVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTV 154

[Close]

BLAST of CmaCh18G002360 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-08
Identity = 41/161 (25.47%), Postives = 79/161 (49.07%), Query Frame = 0


Query: 17  FLQVLIILGLASLAIWASLIPKKPIFIISNMDLK--PYQNGSASSSLALNVTISNPNKMV 76
           FL VL  +G+ +  +W SL P +P F I +  ++      G  ++ +A NVTI NPN+ +
Sbjct: 50  FLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHM 109

Query: 77  GVFFDELNVTVRCKNESVG-------------SSSMSGFYLESKRIDVHE---VELGVNG 136
           GV+FD +  ++  K++ VG             ++++    L    + V+     E   + 
Sbjct: 110 GVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWTEFSNDR 169

Query: 137 LCGKVDLRVGLVTSVGYKIMWFKTKHRGLVLEDCVHIGPDG 160
             G V  R+ +V+++ +K+  + +KH  +     + +G DG
Sbjct: 170 AQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDG 210

[Close]

BLAST of CmaCh18G002360 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 48.9 bits (115), Expect = 4.7e-06
Identity = 30/99 (30.30%), Postives = 52/99 (52.53%), Query Frame = 0


Query: 20  VLIILGLASLAIWASLIPKKPIFIISNMDLKPYQNGSASSSL----ALNVTISNPNKMVG 79
           VL+ LG+ +L +W  L P    F ++  DL  ++    S +L    +LN +I NPN+ +G
Sbjct: 61  VLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIRNPNQRLG 120

Query: 80  VFFDELNVTVRCKNESVGSSSMSGFYLESKRIDVHEVEL 115
           + +D+L V     ++   +++M+ FY   K   V   EL
Sbjct: 121 IHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTEL 159

[Close]

BLAST of CmaCh18G002360 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 45.8 bits (107), Expect = 4.0e-05
Identity = 24/96 (25.00%), Postives = 51/96 (53.12%), Query Frame = 0


Query: 18  LQVLIILGLASLAIWASLIPKKPIFIISNMDLKPYQNGSASS----SLALNVTISNPNKM 77
           + +++ILG+A+L  W  + P+   F +++  L  + + S  +    +LAL V + NPNK 
Sbjct: 46  ISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKR 105

Query: 78  VGVFFDELNVTVRCKNESVGSSSMSGFYLESKRIDV 110
           +G+++D +      + +   + +++ FY   K   V
Sbjct: 106 IGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTV 141

The following BLAST results are available for this feature:

BLAST of CmaCh18G002360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN1	1.1e-07	34.74	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9SJ52	5.6e-04	25.00	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	7.3e-04	29.70	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]

BLAST of CmaCh18G002360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHD2	5.7e-44	60.26	cysteine-rich receptor-like protein kinase 10 OS=Momordica charantia OX=3673 GN=...	[more]
A0A1S3B3M5	6.3e-43	58.06	NDR1/HIN1-Like protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485604...	[more]
A0A5D3BKC2	6.3e-43	58.06	NDR1/HIN1-Like protein 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0LRN3	1.0e-40	58.86	Harpin inducing protein 1-like 9 OS=Cucumis sativus OX=3659 GN=Csa_1G064770 PE=4...	[more]
A0A5A7URJ4	2.6e-28	53.64	NDR1/HIN1-Like protein 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of CmaCh18G002360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573211.1	4.1e-81	94.41	NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7012385.1	1.3e-69	87.42	NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038895943.1	1.1e-54	67.76	uncharacterized protein LOC120084116 [Benincasa hispida]	[more]
XP_022140153.1	1.2e-43	60.26	cysteine-rich receptor-like protein kinase 10 [Momordica charantia]	[more]
XP_008441503.1	1.3e-42	58.06	PREDICTED: NDR1/HIN1-Like protein 3-like isoform X2 [Cucumis melo] >XP_016899081...	[more]

BLAST of CmaCh18G002360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61760.1	4.5e-09	22.35	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11650.1	7.7e-09	34.74	NDR1/HIN1-like 2	[more]
AT4G05220.1	1.0e-08	25.47	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35460.1	4.7e-06	30.30	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35980.1	4.0e-05	25.00	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 168..170
None	No IPR available	PANTHER	PTHR31415:SF125	PROTEIN NDR1-LIKE	coord: 4..169
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 4..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G002360.1	CmaCh18G002360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0016301	kinase activity