CmaCh18G002260 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh18G002260
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr18: 1224796 .. 1229141 (-)
RNA-Seq ExpressionCmaCh18G002260
SyntenyCmaCh18G002260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGCACTTAGCCGTTTGACGAACTATCGCCGGCGCTACAGGCCGCCGCACTCTGCTCCGTCGTTACCATCCGAGACAGTTCATCTCTACTCCTACCTCTGCCTCTGAGCTTAACCGCAATTTGATTATGAATACTACTCCTACGACTACAGAGCAGACCGCGAGCTACGCGTTGATCGAAACGCGATAGCTCATATGGAAGACTCGGAAGGATCGGTTCTGCAGTCGGTGTTCATTGGAAGTTCCCGCACGAAGAAGCATCTTAGAGTTTTTCTGCTTGAAAAGGGGCTTTTATTTATACTTGAGCGGACTTACACTTTCATATCAATGTCAAGAGATAGCATGTCCAAATTATCAATCTGTATACATGCTTATTGAAGTTCTAAAAAAAAAACTGAGTTTCTGAGAGGATTTAGACACAGTTCTTAAGAAATGTGTTTTCTCAGAAAGCACAATGAATCATTGTTGCGATGCAGAACTATATCTTTGATCAACATCCCTGACATCTTGAACTTGATTTGCATATTGCAGGTTCCAAAGAACATCCTCCATGGACGGTCGACTCATTTCAGGGGAAATGCATCTGTTCATTAGGGAAATAATGGTTGATAGGGACTCTTGTGTGCAGGTAGCTAGAATGGTTGGATCGATGAGTCGCCTCCGTCCGTCCTGGCTGTTTAAACTCATCTGTATAATCAACAATCATTTAGGTAAATCTTGAACTGAACAGTTAAAAGGAATGGAAGATCATTAAGTGTTTTGTTTGTTCTTGCTGTTGCTTAAGCCCTATGCATTACCACCATGAGTGATTAATTTTGATTTTCTCATGCCCCTTGACAACCAAATGGTACAATGCTAATAAAGCAATAATCAGAAACTTCATGGCCTACCATTTCCTTTAGTACAGAAGGGTCTTTTCTAGCAGACACAGAAGGTGCTATAAGTGCCTCTAGTAGTATAAACCCAAAGCTATAAACATCATCCTTCAAGCTCATCATTTGCCTGAGGATAGATATCCATGTGAGAAAACAGTTAACATCTTGGAAAAGAATGACCCAAATTATCACAAAAATTTCTTACCAAGCTTGTGGGCCTTCCCCTTTAGCCTACACAAACAGAAAACCAAGTAATCAGCATTTATCAATGATCCAATAGCAGCCATAATCAAGTTCTACCTACCACAGATTTTGCTGGTTCTTCTGAGATAATGGATAATCCATAATCACTTAACTTTGCCACATTATAATCAGCAATCAAGATATTGTTGATCTTTAGTCGGTTGTCGAAGAAACCAGGAATGACTCCAGTATGCAGGAAGTGTACAGCCTTGGCAACACTGATTAGAATTGCTAATCTTTCAGACCAGTTCAAAACCTTCTCTACAAGTTCAACGATTTGTTAGTCAAAAGAGAAATGTTTCTCTCAAGTAGTGGAAGTCAGAATTCATTTAGAGAATCAGTCCGAAAATGCTTCTAAATTACCAGATAGATGTGTACGAAAACTCCCATTTGGAATATATTCGGATACGAGGAAGACCTTGATGTCATTGAAGTCTTGTCCATCTCCATCAATGCAGTGACCCAAAAGGCAGACCAAATTTGGGTGCCTGAGCTTTCCAAGCATATCCAACCTAAGTTTAAGATTTCTTATTGAAAATTTCTTGGATATAAGCAAGGATCTTATGGCAACTTGAGTCCCATTCTCCAGTCTCCCTCTATATAGCTGCAAAACATATAAAAAAAGACATGATGTATATATATACTTCAACTGTTCATGAGCCATTTCAAGTGGATGAATTCTTGCAGATCATTTAGGAAATGATTCAGCATTACGAAAGACACATGCATGGGAAAACAGGTGGAAACCTATTGTAATAGAAAAGGTACACCTAGAACTCTAAAGTAACATAACTATGGTTTTTAATCATCATTGATCAAGTACGTTTCCCATTTGATGAAGAAACTTTCTATTTGAATATGTCAATCAGATATGTGAGATCCCACCTCGGTTGCGGAGGAGAACGAAGTATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAAACCTTGAGAAAAAACCCGAAAGGGAAAGACCAAAGAAGATAATATCTGCTAGCGTGGGCTTGAGTCGTTACATATATTGTTATATAAATTCTTATGAACAGCTAGTCCAAACTCCAAATGTTTGTTTCTTCTTGTAAATATATTTTCATTTTGTTAGGAGAAACCGAGCTTTCATGGAGAAAAATGAAGAACTGTCTCACTTTCACTTCCTCAGCTTATTTGGAAAATGAGCCACTCACAAACAGCTGAACTTGATCCATATTGATTGAAGTGAATCTAATGATTAGAATGTTACCTTCCCGTATGAACCATCACCAATGATAGTTGAGTCATGAAAATTTCTTGTAGCTTCATTTATCTCCTCCAAGGAAAAAGTTCGACACAATGGAAGACCTTGAATTCCTAACTTTGCAGCTTCAGAAACAAACCCTGCAAGCAGGACGCTTGGAAATGGTAAAGCTCAACATCTTTTACTCATGAAGTCTACTAATTTTGACTAAACGAATAACTGCAAATGGAACTTTAGCTGAACTTACTTGCACTTGTTAGAAGCTCAGATGAGAACCCTGCTGTTGAACTATCCTGAACTGATTTCTGCAATAAATGTTGTTCTGATATTCCTCTAGGCCAACATCTTCTACATAAAACAAACCCAATAGAAAGTAGAAGCACTGATAACAAAATTCCAAGAAGTAATCCCATTACAACTCCTGCATGTTTAGCTCTATACTGCTCCTGGTGCTGATCATGGTTCATATTCTCTGTATCACAATATGATTTTGTATGCTGTTTCCCTACATGAACAGATAAGCAATTCCCGTCTGCCTTCAGAGTTCGATTATCAGATTCAATGCCCAAGCAGGAAGGCAATCCTCCAGTAAGCATATTGCTAGATATATCAACAAACTGAAGCATGTTGCCACACTCCATATGGATCGGTAGCGACCCAGATAACTTATTCGAAGAAAGATTCAAGTGACTGATGTTGGGCAAGGAGAAGATTGTAGCAGGAGGGGTGCCAGTCAATTCATTGAATGATATATCAAGCTGTTGGAGCTGACTAAGCTGACCATATTGCTGTGGAATCTCACCCGAAAACGAGTTTTTTCCGAGTAAAACGACAATCAATGCCTTCGGTAATGTAGGCAGTGATGAATCTATTTTGTTCCAGCTCAAGTCCAGCACAGTTAAGCCATGTAATTTACTTAGATCTGGTAATTCACCAGATATGTCATTGCCAGACATGACAAGCTCAGTAAGGGTACTGATGCTCAAAGATGGAAACGAATCCTTGATCTTGTTGTTTTTCAAGCTCAGCACTGTCAGACTAGACAATGAATCAAACCAGTCGGGCATAGTATCATTGAAGAAGTTGTCATCCAGTTTAAGTGTTTGAAGCTTCACCATGGTAGAAATCTTAGGTGGGATCGAACCAAAAAGATAATTTGAGCTCAAATCCAGATATTCAAGTGAAGATAATCGATGGATTTTGTCTGGAAGTGGACCCCAGATGCCCAAAGACACAAGGCTAAGAACTCTCAAGCTATTTAGTCTTGTCAAAGTAGTGATGAATGAATCAAGAGAGAAACTCTCTGATAGCGTTTGATTTGGTATTGCAAAGCCAATGAACTCGTCGACTTTGCTTTGAGTATCACCTGCAATTCTAAGCTCAGTAACCACACTATCCTGGCATGTAACGTTAACAAGAGGAAGAAAGGACAGTGTGCAAAAGTCCACTCTGTGATCAGTCCATGAATCCAGCTGCTTCGGGTACTCCAGGTGCTTTCTCAGCTGGAGAAGCGCTTGGGCTTGCGAGGCTTGCAATTGGTAAGCTCCACCACGTAAGAAAGTGCAAGCAAAGCTGAGAAGTAAGAACAAACAATACTTCCCCATCAAAGATTCTTCAAACTATATGATCTGACCTGCTTCTTCTTCTTGTTCTTCTTGCAGCCTCTGTTTCAGAAACATCAAAATGGCGAAGGGTTTCAAGCAATCATGAAAGGAGATTGAAAATGGCTACGGGTTTGCAAAACCCACCAAGAAAAACGTTAGAAATAGAAGAGAGGGCGATGAAATGGAGTCATTATTGAAGCAAAACCCAGCGGAGACTGAGAGTATGAACACACTGGGACTGGCTTTCTTCTCCGGACTGTCATTCGAGGAAGAAATTCACAGAGCAGTGAAGGCTGATGCGAAAGTGGGCCACCTGAAGTGGACGCGTTTAGTTTTAGCACATGATTTCCTTCTCTCTCTCTCTCTCTCTCTCT

mRNA sequence

ATGCTCGCACTTAGCCGTTTGACGAACTATCGCCGGCGCTACAGGCCGCCGCACTCTGCTCCGTCGTTACCATCCGAGACAGTAGCTAGAATGGTTGGATCGATGAGTCGCCTCCGTCCGTCCTGGCTGTTTAAACTCATCTGTATAATCAACAATCATTTAGATAAGCAATTCCCGTCTGCCTTCAGAGTTCGATTATCAGATTCAATGCCCAAGCAGGAAGGCAATCCTCCATCCATGAATCCAGCTGCTTCGGGTACTCCAGGTGCTTTCTCAGCTGGAGAAGCGCTTGGGCTTGCGAGGCTTGCAATTGGTAAGCTCCACCACCCTCTGTTTCAGAAACATCAAAATGGCGAAGGGTTTCAAGCAATCATGAAAGGAGATTGAAAATGGCTACGGGTTTGCAAAACCCACCAAGAAAAACGTTAGAAATAGAAGAGAGGGCGATGAAATGGAGTCATTATTGAAGCAAAACCCAGCGGAGACTGAGAGTATGAACACACTGGGACTGGCTTTCTTCTCCGGACTGTCATTCGAGGAAGAAATTCACAGAGCAGTGAAGGCTGATGCGAAAGTGGGCCACCTGAAGTGGACGCGTTTAGTTTTAGCACATGATTTCCTTCTCTCTCTCTCTCTCTCTCTCT

Coding sequence (CDS)

ATGCTCGCACTTAGCCGTTTGACGAACTATCGCCGGCGCTACAGGCCGCCGCACTCTGCTCCGTCGTTACCATCCGAGACAGTAGCTAGAATGGTTGGATCGATGAGTCGCCTCCGTCCGTCCTGGCTGTTTAAACTCATCTGTATAATCAACAATCATTTAGATAAGCAATTCCCGTCTGCCTTCAGAGTTCGATTATCAGATTCAATGCCCAAGCAGGAAGGCAATCCTCCATCCATGAATCCAGCTGCTTCGGGTACTCCAGGTGCTTTCTCAGCTGGAGAAGCGCTTGGGCTTGCGAGGCTTGCAATTGGTAAGCTCCACCACCCTCTGTTTCAGAAACATCAAAATGGCGAAGGGTTTCAAGCAATCATGAAAGGAGATTGA

Protein sequence

MLALSRLTNYRRRYRPPHSAPSLPSETVARMVGSMSRLRPSWLFKLICIINNHLDKQFPSAFRVRLSDSMPKQEGNPPSMNPAASGTPGAFSAGEALGLARLAIGKLHHPLFQKHQNGEGFQAIMKGD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G002260.1CmaCh18G002260.1mRNA