CmaCh18G001730 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATACAGGATTCCAATTCTCGCTTCATGTTACATTGATCAGAACAGAGAATCTCTTGATTCGAACAGTGAGAGTTGCAGCAGGATTTCGGAAGAGAGGAGAGGATGCATTCTTTGAGCTTCAAGGTTTTTGGTGATTTTAATGCGGGGTCGAGGATGAATTTAACGGGACGAGGAAGCTTTTGTGTTCCGGAAATGGAGGTTGGGATAATTAGGTGTTTTGGAGGTCGTCGAGCATTTGGAAGAACTTGTAGGATTGTAGCATGCGCTTTGGAGAGGAATGGCGATGGTGGAGGAAGTCAGAGCCAGAGTGCGAGTACGAGTCGGAGTCGTTCGTTTCTGTCTCGCAGTGAAACTTATGCACTACTGAAGCAGCAATTGGAGGTTGCCGCCAAGTCCGAGGTCTCTCTCTTGTTTTCTCTTTCTCTCATAACTATGAGTCTCATAAATCAACGTGTTTAAGCTAATCGTCGAAGTTCACTCGTCTGGTGGAATCTTTAACTTTCATTGATGTATCGGATTATTGACTATTGCCGCTAGGTCATTTTTTAATTGCTAGTTAGATTGATTCCGCATAAATTTCTGGTTAAGGAGCTTAGTTATACTTATCGATGTTTGTTTATGATCAGATATGCGTTTCCTCGTGTTCTATTGTTTCTATGTGCTGGAGTTCTCTCATGTCTGCTCGGTTGTCGATTCTATTTTTTCTGTAGCTTTCCAGGTAAAGTATGGTTGAATGGAAAGGCAATATCAGGACTGGAATATGTTTTGCAATCTGAATATGCTTGAACATTCACTGGTTCCCTCATTTGGCCTTAATTTATGGCCTGAAAAAGTTCAAGTATCTGGCTAGATGCGCCCTCTAGAAACTTAAAGGCCCCTCCCCTAAAGACTACATTAGAGTAGTAGATGAAACAATTGTAATTCTAACGTTTTCAAATGCTACGTTCAGTTTACGGATTTTTCCTCTGAATGTCACTTGCTAACTCTAGGATTATGAAGAAGCTGCAAGGATACGTGACTCGTTAAAATTATTTGAAGAGGAAGAGCCAGTTTTGCGTCTTCGAAGACTGATTAAGGAGGCTATTTCTAGTGAGAGGTTTGAGGTACACATTGTTCCAGATCTTTCATTATTGACAATATTTTCATTTTACTTGAGACTTGAGAGTAGACTATACCGAATGTTTGATTAATCCACCCCTCCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGAATATGAAATAGTAATAAATGGAAATAACAATAAATAGAAAAATACATATGATAATAAGACAAATATTAGATATTTGCCTTATAATAAAATATCAAATATAATATATATGGTAAACTATAATTTATTACTAAATATTCTTAACCCCCCACCGCAAGCTAAGCGTCAGATTTAAACGAACGTGAAGCTTGAATCTGAAAAATTCAAAGAGGTTGAGAAACACTTTTTATGAAGATGCTAACAACCCGGTTCTTGGTCATCAAAAATTGCAGAGGGATCGCCGCTCAGCGGCGATGCTGCCTTGGCTTCGGCGAGAATATGTCTAACCCATGAAGAGGGATTGTCGCTTAGCGACGATGCTGCCTTGGCTCTGGTGAGAATATTTCTAACCCCAAGAAGTAGAAGGGGAAACCTAGAGCAAGGGACAAAGACAATGTTGAAGCCGGAAGAGTCGCCACATTGGGCGAAGGAGCCAATTTTGGCGAGAAGGGCAGTCGGAAGAGTCGCCTCATCGGGCGAAGAAGCCAATTTTTGCAGGAAGGGCGGCGGCAACTTGGTTGGCGAATAGGCCAGTGCGGCACCCAGATTTCGAAGGTAAATCTCTGCAGAAGGTTGATAGGTTTAGGTTAGGGTTTATGTGAAGGATGAAGGTTGATTGGGAAGAAAATGAGAGAGACTATATTGGCCAAGGGGAAAACCGATTGGGTTGGAAAATGTGAGGTTGTATGTACAGAGTATGACGAAAGGTGATTTGGAGGTCAATAGGGTGGAGCCGAAGAGTAATCAATCGGCTCCACCTGCGGCAACCATGAAGACTGCCCCTACGGCGTCAAAGCCAACAGGGGTGGTGGAGAAGAAGATTAGAGGATTCAAAAGCCATTGAAAAGAGAGGATCGGGGTTGTTAAACCGAGAGGGCTCTGATACCATGTGAATGTTTGATTAATCCACCACACCTAGATGGTGTGAAAGTTATCTTATTTATAATCAAATGAATTACAAGGATATGAAAATAGTAATAAATGAAAATAACAATAAATGGAAAGATACTTATGTATTTGCCTTATAATAAAATATCAAATATATTATATATGGTAAACTATAATTTATTACTAAATATCCTTAACACCACCTATTACCGTGTCGTGTTCTCTATGAATGACTAATAAATATAATGGCTTCAAAACCGATGGACATATGCCTTTTTCAGTTTTGGCCCTTGGGGTTAATAATTTGATAAATATATTTTATTAATTTCTGGACAAGCTTGGCACAAGTCGGTGGCCGCAGCCTTGACTGACTCCACAACTTTATTTCATCTCGTAATACCATGACTTCATCACTACCTTTTTCCATTTATCTATTTGCAAAATTTTCTTTTCAGGATGCTGCTAAATATCGTGATGAGCTGAATGAAATTTCTCCTCACAGTCTTTTGAAGTGTGCAAGTGATGCGACAACTTTGGTACATTTTTTTATCTTCTTATGAATGTTGTTGATGGATTAAATAACATACCGTTTTTTCAATTTATAAAAGTAACCTCCTCTTGCTATCTGAATCAAACATACTATCCTATATGCTACCTAATAAATGTCTGTTCTTATTTCATTCATAAAGAGTTAAAAAATGACAATTATTCCTTCCTTCAGAATAAATTGATTAGAGAAACGGAGTGTGTAGAAGCTAGAATCTCCATGTGTGAGCGGATGAAAATCTTGACAGTAGACATAATTTTGATTGATTCTGTAATGTTATGAACCAAAATAAAAGATAAGAGAACTACACGATCGCCCAAGTAATTTGAGGCACTTGGATCCTTTCTATCTTGAAATCACTCAGGCCTAAACCAACTGAATCAATGCTTAACTTCCTCCTTTCCCACTTCCCCATTCATAATCAAAGACAATGACTAACTCTCTATTATTTACTAATAAATCCCTATAATACTACTAATTCTCCCTTCTAATGTCATTCCTATCATGTAGGGTATAAGGGTACAAGTCAGGAGTGTTTACATAGAAGGCCGAAGCCAGCCTTCGAAGAATCAGTACTTTTTTGCATATCGAATTAGAATAACCAATAATTCAAACCGGCCAGTTCAACTTCTCAGAAGACATTGGATTATCACTGATGCAAATGGGAAAACAGAAAATGTCCGGTAAGTTTGACTTGCTTCTATACATTCCTCCTTGATGCATTAAGCATGTGAAGGTGTGTTCCCCCGCTCAACCTGGATGTGTTTTTTATTTTTGCAGGGGTGTTGGTGTTATTGGTGAACAACCAGTTATACTTCCCAAGACTGGCTTTGAATATTCATCAGCATGCTCATTAACTACTGCTAATGGTAGAATGGTTAGAACAATTTTACCTATATGAACTTCTTGTTGTTTATATTCTTTTTCCGTTTATAATTATGTCTGTTTTTCTGATCCAGTAAAAGGACTGCTATAACGTATTGTCTTAAACATGTCGAGTAAAATTTATAGTCAAACTTGTTTTCATAAATTCACATGTGGAGTGCACACTTCAAACACGCTTTCATTGGGAATTTTTTGTTTTGCTTTTTAGTGGGACATCCATGATGCAATATTATTTTCTTTCTTATTTATGTCTAACAAGGTAAGAAGCTGTAAGTTCTTGATATTTTTTTAAACTCAGAAATGTCTAACAAGCCTGAACATCCATGGTAGACGATAAAGAAAAAGCCTCACGAGGCATTTCTCTTGAAATTGCATGCTAAATAAATTGTTATCTTTTGGTAATTGCGCGTTCACATTGCATATCACATCATGTTTTTTTCCAAATTCTACGCATCTACTCATTTTATGAGTGGAATTTTTCGTAATTGAAAAAACAGAATATTTAATTCTTTTTACTTTTACATAATAAATTAAATCTTAATCTTACTTGTGAATTCATGCTTATTTGGCATTATGAAAATGGGTGGTAAACCTGAGTTCTTTCTAAATGTGGTGCAGGAAGGTGACTATGAAATGAAGTACATTGACATTGTAGGAGAACAATCATTTAACGTTGCTATTGCTCCATTTTCTCTCTCCATATTAGGAGATAGCACAGACGCTTTCTAAGGTGTAAACTGCAACCAAAGGTCAGCCAGGCAGAGGTTTTTTGGAACATCAAGAGCTCTGTTGATAAAGCTGTTTGCAGATTTTGTAGATATTCTTTCATTGGGGATGCGATAGACCAAGCCTTGCCAACAAATCCATGATAGTCTCAAATGAATTTGGAAATGTTAGGAGCTTCTTTGTTTATAGACTCCGGAGAGAATTGTTGTAAAGATCAACGTGTGTATAGATTTGTTGCCACTTTAATTATAGTCGGTAGACCCAATTCATTATTTTGAAATTGAACCATATTGTATTAAAAAATTCTCTGTCACACCCACCAACCAGCATCTTAGATTAATGTTGCACCTGTCTTGATGATAAAAA ATACAGGATTCCAATTCTCGCTTCATGTTACATTGATCAGAACAGAGAATCTCTTGATTCGAACAGTGAGAGTTGCAGCAGGATTTCGGAAGAGAGGAGAGGATGCATTCTTTGAGCTTCAAGGTTTTTGGTGATTTTAATGCGGGGTCGAGGATGAATTTAACGGGACGAGGAAGCTTTTGTGTTCCGGAAATGGAGGTTGGGATAATTAGGTGTTTTGGAGGTCGTCGAGCATTTGGAAGAACTTGTAGGATTGTAGCATGCGCTTTGGAGAGGAATGGCGATGGTGGAGGAAGTCAGAGCCAGAGTGCGAGTACGAGTCGGAGTCGTTCGTTTCTGTCTCGCAGTGAAACTTATGCACTACTGAAGCAGCAATTGGAGGTTGCCGCCAAGTCCGAGGATTATGAAGAAGCTGCAAGGATACGTGACTCGTTAAAATTATTTGAAGAGGAAGAGCCAGTTTTGCGTCTTCGAAGACTGATTAAGGAGGCTATTTCTAGTGAGAGGTTTGAGGATGCTGCTAAATATCGTGATGAGCTGAATGAAATTTCTCCTCACAGTCTTTTGAAGTGTGCAAGTGATGCGACAACTTTGGGTATAAGGGTACAAGTCAGGAGTGTTTACATAGAAGGCCGAAGCCAGCCTTCGAAGAATCAGTACTTTTTTGCATATCGAATTAGAATAACCAATAATTCAAACCGGCCAGTTCAACTTCTCAGAAGACATTGGATTATCACTGATGCAAATGGGAAAACAGAAAATGTCCGGGGTGTTGGTGTTATTGGTGAACAACCAGTTATACTTCCCAAGACTGGCTTTGAATATTCATCAGCATGCTCATTAACTACTGCTAATGGTAGAATGGAAGGTGACTATGAAATGAAGTACATTGACATTGTAGGAGAACAATCATTTAACGTTGCTATTGCTCCATTTTCTCTCTCCATATTAGGAGATAGCACAGACGCTTTCTAAGGTGTAAACTGCAACCAAAGGTCAGCCAGGCAGAGGTTTTTTGGAACATCAAGAGCTCTGTTGATAAAGCTGTTTGCAGATTTTGTAGATATTCTTTCATTGGGGATGCGATAGACCAAGCCTTGCCAACAAATCCATGATAGTCTCAAATGAATTTGGAAATGTTAGGAGCTTCTTTGTTTATAGACTCCGGAGAGAATTGTTGTAAAGATCAACGTGTGTATAGATTTGTTGCCACTTTAATTATAGTCGGTAGACCCAATTCATTATTTTGAAATTGAACCATATTGTATTAAAAAATTCTCTGTCACACCCACCAACCAGCATCTTAGATTAATGTTGCACCTGTCTTGATGATAAAAA ATGCATTCTTTGAGCTTCAAGGTTTTTGGTGATTTTAATGCGGGGTCGAGGATGAATTTAACGGGACGAGGAAGCTTTTGTGTTCCGGAAATGGAGGTTGGGATAATTAGGTGTTTTGGAGGTCGTCGAGCATTTGGAAGAACTTGTAGGATTGTAGCATGCGCTTTGGAGAGGAATGGCGATGGTGGAGGAAGTCAGAGCCAGAGTGCGAGTACGAGTCGGAGTCGTTCGTTTCTGTCTCGCAGTGAAACTTATGCACTACTGAAGCAGCAATTGGAGGTTGCCGCCAAGTCCGAGGATTATGAAGAAGCTGCAAGGATACGTGACTCGTTAAAATTATTTGAAGAGGAAGAGCCAGTTTTGCGTCTTCGAAGACTGATTAAGGAGGCTATTTCTAGTGAGAGGTTTGAGGATGCTGCTAAATATCGTGATGAGCTGAATGAAATTTCTCCTCACAGTCTTTTGAAGTGTGCAAGTGATGCGACAACTTTGGGTATAAGGGTACAAGTCAGGAGTGTTTACATAGAAGGCCGAAGCCAGCCTTCGAAGAATCAGTACTTTTTTGCATATCGAATTAGAATAACCAATAATTCAAACCGGCCAGTTCAACTTCTCAGAAGACATTGGATTATCACTGATGCAAATGGGAAAACAGAAAATGTCCGGGGTGTTGGTGTTATTGGTGAACAACCAGTTATACTTCCCAAGACTGGCTTTGAATATTCATCAGCATGCTCATTAACTACTGCTAATGGTAGAATGGAAGGTGACTATGAAATGAAGTACATTGACATTGTAGGAGAACAATCATTTAACGTTGCTATTGCTCCATTTTCTCTCTCCATATTAGGAGATAGCACAGACGCTTTCTAA MHSLSFKVFGDFNAGSRMNLTGRGSFCVPEMEVGIIRCFGGRRAFGRTCRIVACALERNGDGGGSQSQSASTSRSRSFLSRSETYALLKQQLEVAAKSEDYEEAARIRDSLKLFEEEEPVLRLRRLIKEAISSERFEDAAKYRDELNEISPHSLLKCASDATTLGIRVQVRSVYIEGRSQPSKNQYFFAYRIRITNNSNRPVQLLRRHWIITDANGKTENVRGVGVIGEQPVILPKTGFEYSSACSLTTANGRMEGDYEMKYIDIVGEQSFNVAIAPFSLSILGDSTDAF Homology
BLAST of CmaCh18G001730 vs. ExPASy Swiss-Prot
Match: Q8G2L5 (Protein ApaG OS=Brucella suis biovar 1 (strain 1330) OX=204722 GN=apaG PE=3 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.0e-26 Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 0
BLAST of CmaCh18G001730 vs. ExPASy Swiss-Prot
Match: A9M7Z1 (Protein ApaG OS=Brucella canis (strain ATCC 23365 / NCTC 10854) OX=483179 GN=apaG PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.0e-26 Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 0
BLAST of CmaCh18G001730 vs. ExPASy Swiss-Prot
Match: B0CJT2 (Protein ApaG OS=Brucella suis (strain ATCC 23445 / NCTC 10510) OX=470137 GN=apaG PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.0e-26 Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 0
BLAST of CmaCh18G001730 vs. ExPASy Swiss-Prot
Match: A6WVX4 (Protein ApaG OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / JCM 21032 / NBRC 15819 / NCTC 12168) OX=439375 GN=apaG PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 8.8e-26 Identity = 62/122 (50.82%), Postives = 75/122 (61.48%), Query Frame = 0
BLAST of CmaCh18G001730 vs. ExPASy Swiss-Prot
Match: B2S946 (Protein ApaG OS=Brucella abortus (strain S19) OX=430066 GN=apaG PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25 Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = 0
BLAST of CmaCh18G001730 vs. ExPASy TrEMBL
Match: A0A6J1JZR7 (uncharacterized protein LOC111490299 OS=Cucurbita maxima OX=3661 GN=LOC111490299 PE=4 SV=1) HSP 1 Score: 566.6 bits (1459), Expect = 5.9e-158 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of CmaCh18G001730 vs. ExPASy TrEMBL
Match: A0A6J1GRJ0 (uncharacterized protein LOC111456816 OS=Cucurbita moschata OX=3662 GN=LOC111456816 PE=4 SV=1) HSP 1 Score: 552.4 bits (1422), Expect = 1.2e-153 Identity = 281/290 (96.90%), Postives = 286/290 (98.62%), Query Frame = 0
BLAST of CmaCh18G001730 vs. ExPASy TrEMBL
Match: A0A6J1KKQ3 (uncharacterized protein LOC111495061 OS=Cucurbita maxima OX=3661 GN=LOC111495061 PE=4 SV=1) HSP 1 Score: 515.4 bits (1326), Expect = 1.6e-142 Identity = 265/291 (91.07%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of CmaCh18G001730 vs. ExPASy TrEMBL
Match: A0A6J1EAQ4 (uncharacterized protein LOC111431440 OS=Cucurbita moschata OX=3662 GN=LOC111431440 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 7.7e-142 Identity = 263/291 (90.38%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of CmaCh18G001730 vs. ExPASy TrEMBL
Match: A0A0A0LWB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046130 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 1.9e-140 Identity = 267/291 (91.75%), Postives = 274/291 (94.16%), Query Frame = 0
BLAST of CmaCh18G001730 vs. NCBI nr
Match: XP_022994651.1 (uncharacterized protein LOC111490299 [Cucurbita maxima]) HSP 1 Score: 566.6 bits (1459), Expect = 1.2e-157 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of CmaCh18G001730 vs. NCBI nr
Match: XP_022954598.1 (uncharacterized protein LOC111456816 [Cucurbita moschata]) HSP 1 Score: 552.4 bits (1422), Expect = 2.4e-153 Identity = 281/290 (96.90%), Postives = 286/290 (98.62%), Query Frame = 0
BLAST of CmaCh18G001730 vs. NCBI nr
Match: KAG7012250.1 (apaG [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 550.1 bits (1416), Expect = 1.2e-152 Identity = 280/290 (96.55%), Postives = 285/290 (98.28%), Query Frame = 0
BLAST of CmaCh18G001730 vs. NCBI nr
Match: XP_023542879.1 (uncharacterized protein LOC111802666 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 547.7 bits (1410), Expect = 5.9e-152 Identity = 280/290 (96.55%), Postives = 284/290 (97.93%), Query Frame = 0
BLAST of CmaCh18G001730 vs. NCBI nr
Match: XP_038895353.1 (uncharacterized protein LOC120083605 [Benincasa hispida]) HSP 1 Score: 522.7 bits (1345), Expect = 2.0e-144 Identity = 269/290 (92.76%), Postives = 275/290 (94.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|