CmaCh18G000240 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACAAGAATGAAAATGAAAGAGAATCAGCTGGTTATGGGGGGATGTCAACGTACCTTCATGCACCAACCAGCCCACATATCGTCGTAGCGTCCAATTGGCTGACCATCACCCATGAGACCGAAATACATTGCTGGGCCGATGAGCTTACGGTCAAATGCCAGATTCATGCCACACATGGGGAAGAGGGTTGACTTTGGAATAGTCAAGACTGCATCAACATACCTAAGGGATAGCTAAAACAATCAGCTTATGATTAAAAAAACAACTCTAGTGTAATTCAATCAGTTTATACCTTGTATTTCTCTCAAGGGGCTTCACAAGCTGTGTGGGTGCATCGTAATCCGGGATGTTGAGCCACAGGCCATGAGACACTGCGGTAGCGACACCCTCCCGGAGACTAAATGGATATCCACGCACGAAGTCAGCACCCTCACGGTAAGGGTCGTACAAGGTATTGAAGAAGTTCGGTGTAGACGGGGTCAGAAGGTTCTTGATGTGCTGTTCAAGTGCATTGATGTTCTTGCCTGA ATGGGAAACAAGAATGAAAATGAAAGAGAATCAGCTGGTTATGGGGGGATGTCAACGTACCTTCATGCACCAACCAGCCCACATATCGTCGTAGCGTCCAATTGGCTGACCATCACCCATGAGACCGAAATACATTGCTGGGCCGATGAGCTTACGGGGCTTCACAAGCTGTGTGGGTGCATCGTAATCCGGGATGTTGAGCCACAGGCCATGAGACACTGCGGTAGCGACACCCTCCCGGAGACTAAATGGATATCCACGCACGAAGTCAGCACCCTCACGGTAAGGGTCGTACAAGGTATTGAAGAAGTTCGGTGTAGACGGGGTCAGAAGGTTCTTGATGTGCTGTTCAAGTGCATTGATGTTCTTGCCTGA ATGGGAAACAAGAATGAAAATGAAAGAGAATCAGCTGGTTATGGGGGGATGTCAACGTACCTTCATGCACCAACCAGCCCACATATCGTCGTAGCGTCCAATTGGCTGACCATCACCCATGAGACCGAAATACATTGCTGGGCCGATGAGCTTACGGGGCTTCACAAGCTGTGTGGGTGCATCGTAATCCGGGATGTTGAGCCACAGGCCATGAGACACTGCGGTAGCGACACCCTCCCGGAGACTAAATGGATATCCACGCACGAAGTCAGCACCCTCACGGTAAGGGTCGTACAAGGTATTGAAGAAGTTCGGTGTAGACGGGGTCAGAAGGTTCTTGATGTGCTGTTCAAGTGCATTGATGTTCTTGCCTGA MGNKNENERESAGYGGMSTYLHAPTSPHIVVASNWLTITHETEIHCWADELTGLHKLCGCIVIRDVEPQAMRHCGSDTLPETKWISTHEVSTLTVRVVQGIEEVRCRRGQKVLDVLFKCIDVLA Homology
BLAST of CmaCh18G000240 vs. ExPASy TrEMBL
Match: A0A7C8ZLR6 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.3e-09 Identity = 40/112 (35.71%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of CmaCh18G000240 vs. ExPASy TrEMBL
Match: C6TA33 (Uncharacterized protein (Fragment) OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.3e-05 Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of CmaCh18G000240 vs. ExPASy TrEMBL
Match: A0A2P5EBU3 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_212150 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.9e-05 Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of CmaCh18G000240 vs. ExPASy TrEMBL
Match: A0A103YH89 (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_012560 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.9e-04 Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of CmaCh18G000240 vs. ExPASy TrEMBL
Match: A0A2P5BMX1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_224650 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 7.2e-04 Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of CmaCh18G000240 vs. NCBI nr
Match: ACU18685.1 (unknown, partial [Glycine max]) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-05 Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of CmaCh18G000240 vs. NCBI nr
Match: PON83009.1 (hypothetical protein TorRG33x02_212150 [Trema orientale]) HSP 1 Score: 58.2 bits (139), Expect = 6.0e-05 Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of CmaCh18G000240 vs. NCBI nr
Match: KVI09064.1 (hypothetical protein Ccrd_012560 [Cynara cardunculus var. scolymus]) HSP 1 Score: 55.5 bits (132), Expect = 3.9e-04 Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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