CmaCh18G000170 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh18G000170
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionADP/ATP translocase
LocationCma_Chr18: 72937 .. 75316 (+)
RNA-Seq ExpressionCmaCh18G000170
SyntenyCmaCh18G000170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAAATCAATTGCGCTCGCTGCATTCAGCATTCAAATGGTATCAATTGGCATTTCAGCATTCATATGTTATCAATTGGCATTTCAACATTCATATGGTATTCTCCATGGGGGGTTACTCAAGTTATTTATTTGTAATAATTTGTGGAATCTGAAAAAGGGAACATTTGTTTTATTTTGTATGTATGATGTATCTAACCTTCCCCATATCTGTGTTTAATGGTAATGCACCAGGGCGACAACTCCCATGTTCTTCAATCTTTTAGCATCTCTCTCATTTTTTTGAGGAAGTTTAAATGATATGATTAATGAATGGATTGGGATGGTATATTCTGGCTAACAGGAGTTGTAAAGTCCTCAGTTATGTTTACTCATATTTCAGAATGTTGAAAATAAAAGAAAACTTGATAGATTGACCAAAAAGGGGAGTGATATTGAATTCCATGCCCCTATAAGGGTCGTTTAACACAGAAATTGGTAGATGAAAGTTGGTATTGACAACGATACAGGTATAAATGAAATCCTAATTTGAGTTTGTGTTTCAGAATTTACAACACTGGAATCCTACACACCGTGCCTTGTGCTTTCTAAGCTGCAAGCCTTCTGATTTTGGCATTTGCACAGGACTTCCACTCCACTCCAATCCTAGCCTGCATTACATCTCACATAGAATTAGCATTCATGTATCATCTTAATAGCATTTTCCCATATCTTTCTTTTTTATCATTAGGGGGTGCTTACACAGGAAAGGCGAAGGAGCCATTGCTGACATCTGAATGGTTAGAATCGCTTGATTCAGTCGGCACTGCCACGATCGGATCGCCATTGATCACCTCTTTGTGATTTCCCATTCTGTTCTTACCCATACCTGATTCTTTATCCATGCAAGTATCCTCCAGTTTTTCTCCCTCCTTATCCTACAACTCAACACAGAATGAAGGCAACATAAATGGTAATGATTCGTATTAGTAAATCTTCATATTAGTAATCGCGGTGATTTCTGAAGTGCGCATAAATGGTAATGATTCGTACCTTTTGAGGTGATATAATGTGATCTCCATCTTTTGTGTAGTAAGTATCAGGTGTACCTCCATTTATCCTCTTTTCATTATTGCATCTCTTGACTGCTTTATCATGTTCACCATAATTAAGCTGTTTAGAGAGACAGAGAGTGATTTCTTTATCATTCATATTGAATCAATCATATGATAGACAATAAAACATGAGGTTGTATATAAACCTTCCGACTAACTGGTCTTGAAGTTGCTGAAACCAAATCAATGTAATTGGAAGCATCTGAATTCCGATTCTTCATAACATCAAATGCTCCATCTTCTCTGAAACAGAAGACAATGTAGTCTTCATCTTCACATTGTGCCCAACTCGAATCATCAGTCATCTTGTTTTTGACAGCAACAACAGCAGCAGAATCTTCAGAATGCTCCATCTTTCCCTTTCTGTGCCTCGACATCTTCTTGCTATTACTTTTAGCTATTGAGGCAATACTCTTTCTGTCAAAAACCATGGCTCTTATCGGCATTGTGGTTGGGGTTGAAGTGAAATATGAGTCTGGTTCCTTATCTGTAGAAGAAGAAACTTCACTGTTAACATAACAAACCAAAAGGAAGTCGGTCAAAGACAGCTAAAAGTCATTGTGTTTTAAATGCTAGCATGTTCTATTACTTTTGGTTTTAGATAAAGGAAATCTGGAAGCTAAAAAGCATGAAGCCCAATCTCTGACTCGCCATCTCACCAGCCGTGTCATTGTCCATGGAGTGGACATTTCTGTGTCTTTTTCTATTGTCCAATGTTTTCTCCTGTTCGCTCTTCTATTCTAAACCAGTTTTTCTGAGAGAGAAAGAAACTAATCTTTGAATTTGAAAGAGACACCATTACTAGGGGAAGTTACTAATAATGAGGGACGAGTGAGTCAGTTATGTTCCTAAACATGGAGAACTTGGTCAGTTAAATATGTTGTTAAATGAACAACATTTTCAAAAGTACATTGCTGAATCCGTAGTTAGGTTTCTAAATCAAGATTATTCTAAAAGTAATTCCTTTCGTTTTTATGAAAGAAATGGTTGTGAGTGGCATGTGATCTAGCAATGGTAGACGTAGAAAAAACACAAAATCATCCAAACATCAGAGGAGAAGACCATTGAAATGCTAATTGAGATACAGAACAATATATACATATCAGTTACCTTCACTAATTCAATTCCGTTTCTGTTACCTTGTTGGTTGTTGTAGGGCGGAGATGGGTGACATGATCCCTTTGAAACTCGACTTTGTGTGGTGCTATTCGACAGAGGAAGCTTCAAAAGAACAATGCAGGCAGGTTTGGATTGACATTATATACTTGATTTGTTCAGGCTTAG

mRNA sequence

ATGATCAAATCAATTGCGCTCGCTGCATTCAGCATTCAAATGGTATCAATTGGCATTTCAGCATTCATATGTTATCAATTGGCATTTCAACATTCATATGGGGGTGCTTACACAGGAAAGGCGAAGGAGCCATTGCTGACATCTGAATGGTTAGAATCGCTTGATTCAGTCGGCACTGCCACGATCGGATCGCCATTGATCACCTCTTTGGCGGAGATGGGTGACATGATCCCTTTGAAACTCGACTTTGTGTGGTGCTATTCGACAGAGGAAGCTTCAAAAGAACAATGCAGGCAGGCTTAG

Coding sequence (CDS)

ATGATCAAATCAATTGCGCTCGCTGCATTCAGCATTCAAATGGTATCAATTGGCATTTCAGCATTCATATGTTATCAATTGGCATTTCAACATTCATATGGGGGTGCTTACACAGGAAAGGCGAAGGAGCCATTGCTGACATCTGAATGGTTAGAATCGCTTGATTCAGTCGGCACTGCCACGATCGGATCGCCATTGATCACCTCTTTGGCGGAGATGGGTGACATGATCCCTTTGAAACTCGACTTTGTGTGGTGCTATTCGACAGAGGAAGCTTCAAAAGAACAATGCAGGCAGGCTTAG

Protein sequence

MIKSIALAAFSIQMVSIGISAFICYQLAFQHSYGGAYTGKAKEPLLTSEWLESLDSVGTATIGSPLITSLAEMGDMIPLKLDFVWCYSTEEASKEQCRQA
Homology
[Close]
BLAST of CmaCh18G000170 vs. ExPASy TrEMBL
Match: A0A6J1K2D5 (ADP/ATP translocase OS=Cucurbita maxima OX=3661 GN=LOC111490042 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.1e-08
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 70  LAEMGDMIPLKLDFVWCYSTEEASKEQCRQ 100
           +AEMGDMIPLKLDFVWCYSTEEASKEQCRQ
Sbjct: 1   MAEMGDMIPLKLDFVWCYSTEEASKEQCRQ 30

[Close]
BLAST of CmaCh18G000170 vs. ExPASy TrEMBL
Match: A0A6J1GTH4 (ADP/ATP translocase OS=Cucurbita moschata OX=3662 GN=LOC111457285 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.3e-07
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 70  LAEMGDMIPLKLDFVWCYSTEEASKEQCRQ 100
           +AEM DMIPLKLDFVWCYSTEEASKEQCRQ
Sbjct: 1   MAEMDDMIPLKLDFVWCYSTEEASKEQCRQ 30

[Close]
BLAST of CmaCh18G000170 vs. ExPASy TrEMBL
Match: A0A6J1K0P5 (ADP/ATP translocase OS=Cucurbita maxima OX=3661 GN=LOC111490042 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.5e-07
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 73  MGDMIPLKLDFVWCYSTEEASKEQCRQ 100
           MGDMIPLKLDFVWCYSTEEASKEQCRQ
Sbjct: 1   MGDMIPLKLDFVWCYSTEEASKEQCRQ 27

[Close]
BLAST of CmaCh18G000170 vs. ExPASy TrEMBL
Match: A0A6J1GVP4 (ADP/ATP translocase OS=Cucurbita moschata OX=3662 GN=LOC111457285 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.2e-06
Identity = 26/27 (96.30%), Postives = 26/27 (96.30%), Query Frame = 0 

Query: 73  MGDMIPLKLDFVWCYSTEEASKEQCRQ 100
           M DMIPLKLDFVWCYSTEEASKEQCRQ
Sbjct: 1   MDDMIPLKLDFVWCYSTEEASKEQCRQ 27

[Close]
BLAST of CmaCh18G000170 vs. NCBI nr
Match: XP_022994249.1 (ADP,ATP carrier protein ER-ANT1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-07
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 70  LAEMGDMIPLKLDFVWCYSTEEASKEQCRQ 100
           +AEMGDMIPLKLDFVWCYSTEEASKEQCRQ
Sbjct: 1   MAEMGDMIPLKLDFVWCYSTEEASKEQCRQ 30

[Close]
BLAST of CmaCh18G000170 vs. NCBI nr
Match: XP_022955278.1 (ADP,ATP carrier protein ER-ANT1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 64.3 bits (155), Expect = 6.8e-07
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 70  LAEMGDMIPLKLDFVWCYSTEEASKEQCRQ 100
           +AEM DMIPLKLDFVWCYSTEEASKEQCRQ
Sbjct: 1   MAEMDDMIPLKLDFVWCYSTEEASKEQCRQ 30

[Close]
BLAST of CmaCh18G000170 vs. NCBI nr
Match: XP_023541849.1 (ADP,ATP carrier protein ER-ANT1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 64.3 bits (155), Expect = 6.8e-07
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0 

Query: 70  LAEMGDMIPLKLDFVWCYSTEEASKEQCRQ 100
           +AEM DMIPLKLDFVWCYSTEEASKEQCRQ
Sbjct: 1   MAEMDDMIPLKLDFVWCYSTEEASKEQCRQ 30

[Close]
BLAST of CmaCh18G000170 vs. NCBI nr
Match: XP_022994250.1 (ADP,ATP carrier protein ER-ANT1-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-06
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 73  MGDMIPLKLDFVWCYSTEEASKEQCRQ 100
           MGDMIPLKLDFVWCYSTEEASKEQCRQ
Sbjct: 1   MGDMIPLKLDFVWCYSTEEASKEQCRQ 27

[Close]
BLAST of CmaCh18G000170 vs. NCBI nr
Match: XP_022955279.1 (ADP,ATP carrier protein ER-ANT1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-05
Identity = 26/27 (96.30%), Postives = 26/27 (96.30%), Query Frame = 0 

Query: 73  MGDMIPLKLDFVWCYSTEEASKEQCRQ 100
           M DMIPLKLDFVWCYSTEEASKEQCRQ
Sbjct: 1   MDDMIPLKLDFVWCYSTEEASKEQCRQ 27

The following BLAST results are available for this feature:
BLAST of CmaCh18G000170 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh18G000170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K2D55.1e-0896.67ADP/ATP translocase OS=Cucurbita maxima OX=3661 GN=LOC111490042 PE=3 SV=1[more]
A0A6J1GTH43.3e-0793.33ADP/ATP translocase OS=Cucurbita moschata OX=3662 GN=LOC111457285 PE=3 SV=1[more]
A0A6J1K0P59.5e-07100.00ADP/ATP translocase OS=Cucurbita maxima OX=3661 GN=LOC111490042 PE=3 SV=1[more]
A0A6J1GVP46.2e-0696.30ADP/ATP translocase OS=Cucurbita moschata OX=3662 GN=LOC111457285 PE=3 SV=1[more]
BLAST of CmaCh18G000170 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022994249.11.0e-0796.67ADP,ATP carrier protein ER-ANT1-like isoform X2 [Cucurbita maxima][more]
XP_022955278.16.8e-0793.33ADP,ATP carrier protein ER-ANT1-like isoform X2 [Cucurbita moschata][more]
XP_023541849.16.8e-0793.33ADP,ATP carrier protein ER-ANT1-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022994250.12.0e-06100.00ADP,ATP carrier protein ER-ANT1-like isoform X3 [Cucurbita maxima][more]
XP_022955279.11.3e-0596.30ADP,ATP carrier protein ER-ANT1-like isoform X3 [Cucurbita moschata][more]
BLAST of CmaCh18G000170 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G000170.1CmaCh18G000170.1mRNA