CmaCh17G013810 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTACTGACCTCAGACGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTAGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCCCTCCGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTAGCTAATTTGTTGAAACACGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGCTTGCTAAACCTATGA ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTACTGACCTCAGACGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTAGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCCCTCCGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTAGCTAATTTGTTGAAACACGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGCTTGCTAAACCTATGA ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTACTGACCTCAGACGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGCCCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTAGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTGGCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCCCTCCGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTAGCTAATTTGTTGAAACACGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGCTTGCTAAACCTATGA MNTTKTMRLPPRRLLTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDPSEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL Homology
BLAST of CmaCh17G013810 vs. ExPASy TrEMBL
Match: A0A0A0KDC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088100 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.8e-41 Identity = 105/165 (63.64%), Postives = 113/165 (68.48%), Query Frame = 0
BLAST of CmaCh17G013810 vs. ExPASy TrEMBL
Match: A0A5A7T8V2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001610 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.2e-39 Identity = 103/164 (62.80%), Postives = 113/164 (68.90%), Query Frame = 0
BLAST of CmaCh17G013810 vs. ExPASy TrEMBL
Match: A0A1S3CBD7 (uncharacterized protein LOC103498915 OS=Cucumis melo OX=3656 GN=LOC103498915 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.5e-39 Identity = 103/165 (62.42%), Postives = 113/165 (68.48%), Query Frame = 0
BLAST of CmaCh17G013810 vs. ExPASy TrEMBL
Match: A0A314UPU7 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_17525 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26 Identity = 78/147 (53.06%), Postives = 92/147 (62.59%), Query Frame = 0
BLAST of CmaCh17G013810 vs. ExPASy TrEMBL
Match: A0A5B6UNG4 (Embryo sac development arrest protein OS=Gossypium australe OX=47621 GN=EPI10_014052 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 7.3e-26 Identity = 83/151 (54.97%), Postives = 89/151 (58.94%), Query Frame = 0
BLAST of CmaCh17G013810 vs. NCBI nr
Match: KAG7014604.1 (hypothetical protein SDJN02_24783, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66 Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0
BLAST of CmaCh17G013810 vs. NCBI nr
Match: KAG6576089.1 (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 248.8 bits (634), Expect = 2.6e-62 Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of CmaCh17G013810 vs. NCBI nr
Match: XP_038906548.1 (uncharacterized protein LOC120092519 [Benincasa hispida]) HSP 1 Score: 214.2 bits (544), Expect = 7.2e-52 Identity = 113/145 (77.93%), Postives = 118/145 (81.38%), Query Frame = 0
BLAST of CmaCh17G013810 vs. NCBI nr
Match: XP_011656778.1 (uncharacterized protein LOC105435768 [Cucumis sativus] >KGN46382.1 hypothetical protein Csa_005722 [Cucumis sativus]) HSP 1 Score: 177.9 bits (450), Expect = 5.7e-41 Identity = 105/165 (63.64%), Postives = 113/165 (68.48%), Query Frame = 0
BLAST of CmaCh17G013810 vs. NCBI nr
Match: KAA0039884.1 (uncharacterized protein E6C27_scaffold122G001610 [Cucumis melo var. makuwa]) HSP 1 Score: 172.6 bits (436), Expect = 2.4e-39 Identity = 103/164 (62.80%), Postives = 113/164 (68.90%), Query Frame = 0
BLAST of CmaCh17G013810 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 2.3e-19 Identity = 65/158 (41.14%), Postives = 79/158 (50.00%), Query Frame = 0
BLAST of CmaCh17G013810 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17 Identity = 59/150 (39.33%), Postives = 79/150 (52.67%), Query Frame = 0
BLAST of CmaCh17G013810 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 ) HSP 1 Score: 62.8 bits (151), Expect = 2.5e-10 Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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