CmaCh17G013430 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G013430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr17: 9005215 .. 9005970 (+)
RNA-Seq Expression	CmaCh17G013430
Synteny	CmaCh17G013430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTTGACCAGATTGGGAGCGGATTTGATATCGAAGAGGCGTAGGAGGCGACGGTTGACAGTGCCATTGGGGCGAGCGGCGAGGTCGAAGCAGATGGAGGAGAAGGAAGCAAGGAGGCGGGTTTTCAATCAGAGAGAGGGGGATTTGGCAATGGCGGCCGTGGAGGGCGGAGGAGGAGGATTTCAGGAGGGGATAGCCATGGGGGGATTGACTGAATTAGCAGGGGAAATCAATGAGAGAAGGATGGGAGATAAGGAAGATGAGCGCCTGGTCCGCCATGGCTGATGAGCTGTGTGAGCTTTTTTTCTTTCATTTATTGCTTTTCTTTTTACATCTAACATTTTTCAGACTCCAACCCTAACCCTATTTTTGTTTCAGACTTCGGGTTGGCGTCCAAATCGAGTTCCAACTATAGTTCATGCGTCCGACTCCAGAAAAAAGAACTTCACCACATTGACTGTTCGATGATAAGTTCGCATTTTTTACACGCTCGATTATCCTTGATGTCTGATTGATTTATGTATGCCACTACTCGTAGACCTCATCATCGAATATTGTACTAAGATTAGAGGATAATCGGATCATTCACCTTGCCTAATGCGCATTGTTGACGTTGAAAGGAGGGTTGGGAGATGATTGCTTAAGCAAAGGGAAGTGGAAAATATAAGGATGAGCTGAAATTAATGGATAGCTTTCTTGTTTTGTTGGTGAAGTTCCTAGGTTGTTCTTTGGCCCTTGGTTACCATACTCTAC

mRNA sequence

ATGGGCTTGACCAGATTGGGAGCGGATTTGATATCGAAGAGGCGTAGGAGGCGACGGTTGACAGTGCCATTGGGGCGAGCGGCGAGGTCGAAGCAGATGGAGGAGAAGGAAGCAAGGAGGCGGGGGAAATCAATGAGAGAAGGATGGGAGATAAGGAAGATGAGCGCCTGGTCCGCCATGGCTGATGAGCTGTACTTCGGGTTGGCGTCCAAATCGAGTTCCAACTATAGTTCATGCGTCCGACTCCAGAAAAAAGAACTTCACCACATTGACTGTTCGATGATAAGTTCGCATTTTTTACACGCTCGATTATCCTTGATGTCTGATTGATTTATGTATGCCACTACTCGTAGACCTCATCATCGAATATTGTACTAAGATTAGAGGATAATCGGATCATTCACCTTGCCTAATGCGCATTGTTGACGTTGAAAGGAGGGTTGGGAGATGATTGCTTAAGCAAAGGGAAGTGGAAAATATAAGGATGAGCTGAAATTAATGGATAGCTTTCTTGTTTTGTTGGTGAAGTTCCTAGGTTGTTCTTTGGCCCTTGGTTACCATACTCTAC

Coding sequence (CDS)

ATGGGCTTGACCAGATTGGGAGCGGATTTGATATCGAAGAGGCGTAGGAGGCGACGGTTGACAGTGCCATTGGGGCGAGCGGCGAGGTCGAAGCAGATGGAGGAGAAGGAAGCAAGGAGGCGGGGGAAATCAATGAGAGAAGGATGGGAGATAAGGAAGATGAGCGCCTGGTCCGCCATGGCTGATGAGCTGTACTTCGGGTTGGCGTCCAAATCGAGTTCCAACTATAGTTCATGCGTCCGACTCCAGAAAAAAGAACTTCACCACATTGACTGTTCGATGATAAGTTCGCATTTTTTACACGCTCGATTATCCTTGATGTCTGATTGA

Protein sequence

MGLTRLGADLISKRRRRRRLTVPLGRAARSKQMEEKEARRRGKSMREGWEIRKMSAWSAMADELYFGLASKSSSNYSSCVRLQKKELHHIDCSMISSHFLHARLSLMSD

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh17G013430 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G013430 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G013430 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G013430 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G013430.1	CmaCh17G013430.1	mRNA