CmaCh17G012700 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G012700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ankyrin repeat and SAM domain-containing protein 6-like
Location	Cma_Chr17: 8616596 .. 8620329 (+)
RNA-Seq Expression	CmaCh17G012700
Synteny	CmaCh17G012700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGCTGATCGATTGGAGACCGAGACCCATAGGTCGATAAAGGACCGCCTTAATGGAAGCTCTTCCGACCTTTCTACTCGCCGGCGCCCGATTACTGGGAAGAGGTTCGTCTTCTTTTTTTGTTTTTCCACCCTCGTTTGGCGTTTTTGGGATTTTTTTGAAATGTGGGAAGTAATTGTTTTTAGGAATTTGTACTGTTATTCGCAAGTTTTAGTACAATGGTGGAATTTAGGGCTAACATACTTCCGTAGTGTCTTTTGCTGTAGTTGAACTTGCTGGTTTTTTGCGATTTTACTTAAAGAGTGAAGGTGTTGCTACTTTTGGTTGTAACTTCGCGGTTCTTCTCGTTCGAGTTGTTTTTGGAACCTTGTAGATTTGTATGTCTTTTAAGCACCTTGAGATGTTGCAGCTTCCATGGAATGCATGAGGATTGTTTGGTCACATTAGGTCGATTCAGAGTAATGGTTTCCGCCTGAGCAGTCAGACGAACTTCTGCTAGCAGTAATATAAGTGAATGAATCCCATCCCTGTCAAATTCAGTGCTTACGCCCAGATAGGGAGAGGGGCGAGCAAAAGAGCTCATTCTTTCATTTTGAGATCTTTAGATTCGTAAGATCATGATAGAGTCCTCTTTACTTGATATTAAATTTTTACAGCTCCCGCCTTCCTACAACTAATATAGTATAGCAGAGCTGTCAGCTTCAAAGCTGACTTGATTATTAGAGAAATGGGCGATCTTTAGTGGATTAATGGTTGTGCTCGTGTTATTTTTGGCTTCATGATTTTGTGCAGTGCCAAGATTATGCTAAATATTTGTGACACATTCGTTATATAGATTCAAAGTGTAATTGGGATTTAACATTGCCGAAAACTTACTGGGTTGATTCGTGCTAGCATATTTTAGTTGTCAAAGATCTTGAATATGGATATGGCTTTTATGCTTATTTTGGTGAGTGGCTGAGTTAGCTTGGTTTGAGGATCTACATGCTATTATTTGTTGAGTTGTTCTGATTTCATTATATTTTGTTCATACCATATGCATTTCAGGCAGAGAGAAGATGACAAGTGGGAGCATGATCTCTATGTGAATGATAAGCCGCAAACTTCAAGTATGAATTGAGTGTAATTGTATCACTCATCTAAAACCCATCTTTTGTTAGATGATTCTAATTCACTTTATTAGTTTTTGACTATGTTCTATTGGCTTTCAAGACCGCAAAGTCGATGCTCGAGATCTCCGCTTGAAGCTCCAAAAGAAAAGTCAGCAACAAAGTGGAACTGCATCATTTTCAGGAGTGCGGGACCTACGTGAAAAGTTATCTGGCACAATGAAGCCACAAGCTGCAAATAATGATCCATCGAAACTAAAATTGGAAGTTACAAAAACATCCCGAAAAAGGGATACTGTCGAAACTCATCCTTCAACCACTCAAAAAGTTGTAGGCAACCCTGCTACTAGGAAAAAGGCTACTCAAAAGGCAAGAAACTTGCATTAATTTTTATGTCATTTTTGTTTAGACTAGAAAATATATATTCTGTCAAACACATGATGGAGGTTAGGTTGGTCACCTTTTCTGAGAAACTAATTTCTTTTGCTCGTTGACATTGGTTGGGAGGACTTCTAGAAGTTTTTTGTTTAAGTACACCCTTTTCTTTTACTTTTTTGCTTCCTTGGCTTCTGAATTCTCTGGGAGCGCCACGGTTAGGCCAGGGTATTCAAATTAGTGCATCTGGGTATAGTCTTTGTCTTGCTACTTCGCTAATGAACTGAAGAGACTTCCTATCTGTAGGCCAAATGCATGTAATTCTAGACTCGTAGTAATCAAACTTGGAATAGCCGACCTTACGATGCAGCCGAGTAACCATGTGAACTATTGAAAATTAGATGTTTTGTTTTTTAATTTTTCTTTTCTTGACGAACACAAGTCTTGATGCAGAGTGATACATCAGTGAATGACTTCCTACAGTCCTTGGGCCTTGAAAAATATTCCATTACGTTTCAAGCAGAGGAAGTATGAAAATCTTATGTTTCAAGTATAAAATCCATTTTTGAAGATTTCAGCCGGACTTCCCTGAACTAATTAGAACTTTGAACCTCTTTCATATAGGTTGATATGACGGCGCTTGTACACATGGGAGATGAAGATCTCAAGGCTTTAGGAGTCCCAATGGTAAACTTACAAGAACATGATTTGATTTCATTTCAAGCTTTTAGTATTGTTATTATTGTGTGCATTGTATGTTTTCAGCCATCTTGTATCTTTACTTGTGTGCCTGAGTAGCTGACTTGAACTCACTATTTAGTGTTTAGCTATTAACATTTTGAAGTGGTTTCAAATGCTTTCTTGTATTAGTTGATGAAGCTGTGAGGTATTTATGTTTCTGAAGCAGCTAGTTCCTTGAATTCTAATATTTGAACCTATCACTACTAGGAGTAATTGCAGTATGTGGCTTCTCAGATAAGAAAGTATTTGGTCAGTTGTATTTAATCAAAAGTAATAGCTAAGAGAGAGGTTATATGTAGACTCAACCAATGCAAGCTAGCTCTCTCACCTCATTAATTGTTCTCCAATACTGAGGTGCATTTTATGTTATAGAGCTTTACTAAAAAGATTTGGGTGAAACTGACTGGGCTAATTGTGGGTTGGAGAGGGGAACAAAACATTTTTTTATAAGGGTGTGGAAACCTCTTTCTAATAGACGCATTTTAAAATCTTGAGGGGAAGCTCGAAATGGAAAGCCCAAAGAGGACAATATCTATTAGCGGCGGGCTTGGGCTGTTACAAATGATCAGAGTCGGGTAGTGTGCCAACAAGGACGTTGGGCTCCCAAGGGGGGTGGATTGTGAGATCCCACCTTCGTTGGAGAGGGGAACGAAGCATGTTTTATATGGGTGTGAAAACCTCTCCCTAACAAATGCGTTTTAAAACCTTGAGAAGAAGTCTAGAAAGGAAAACCCCAAGAAGACAATATTTGCTAGCGGTGAGTTTGGAGTGTTACACTAATACACAAATAGGCGTCGATCCTAGAAGTTTGAAACTTGTTGAACTTCAAGATCTTTCATCCAAACTGTGCAGACGATTTGTGGAAGAATCTTTAAGTCTTCTGTACAGTTTCTTGGCTTTCTCTGTTATTAGTTGGATGATAGTCAGCCTTCATGTGCTCTTGATAGGAAGATATAGCAAGCAAAAGACGTCTATATGCCAAAATTTGATCACCCTTCATGTGAGAATAACTTAAAAACAGAAAAATACTGTCAACATTCTTCAAGAGTATACTAGACTTAATCTACGACGTGTTTGCCATCATTGTGTTCGCTCGCTCGTTTCTTGTTTTAATGCATGGAAGCAAGAAGGTTGTACTCAAGTTATGAACTGTGCTTTCAGGGGCCAAGAAAGAAGATCCTTTTGGCATTGGAATCAAGGGTCTGAATGATGGAAAGCGGGTAGAGGAAGTTCCTGTTCGCAGATGTTTTATTTTATACCAGCAATTAGACTACTGTGAACAAGTAAGCCCGTCATTCTTCCGCCACCCGTTCTTGCTTCCTTTTCCCCTTTTTATTCCATTTTTGCACTGCTCAGGTTACTGTAAGGATCGATGTTCATCGTTAAGGACCTCAAACTGTTTACCTATGGATGAAAATATGGGATTTAGTACATGTGGGTATGCCTTGGCTGACTTCAAAAATCTTATATTCATACTTCAATAGGAATATATATATTAAAATAGCG

mRNA sequence

ATGTATGCTGATCGATTGGAGACCGAGACCCATAGGTCGATAAAGGACCGCCTTAATGGAAGCTCTTCCGACCTTTCTACTCGCCGGCGCCCGATTACTGGGAAGAGGCAGAGAGAAGATGACAAGTGGGAGCATGATCTCTATGTGAATGATAAGCCGCAAACTTCAAACCGCAAAGTCGATGCTCGAGATCTCCGCTTGAAGCTCCAAAAGAAAAGTCAGCAACAAAGTGGAACTGCATCATTTTCAGGAGTGCGGGACCTACGTGAAAAGTTATCTGGCACAATGAAGCCACAAGCTGCAAATAATGATCCATCGAAACTAAAATTGGAAGTTACAAAAACATCCCGAAAAAGGGATACTGTCGAAACTCATCCTTCAACCACTCAAAAAGTTAGTGATACATCAGTGAATGACTTCCTACAGTCCTTGGGCCTTGAAAAATATTCCATTACGTTTCAAGCAGAGGAAGTTGATATGACGGCGCTTGTACACATGGGAGATGAAGATCTCAAGGCTTTAGGAGTCCCAATGGGGCCAAGAAAGAAGATCCTTTTGGCATTGGAATCAAGGGTCTGAATGATGGAAAGCGGGTAGAGGAAGTTCCTGTTCGCAGATGTTTTATTTTATACCAGCAATTAGACTACTGTGAACAAGTAAGCCCGTCATTCTTCCGCCACCCGTTCTTGCTTCCTTTTCCCCTTTTTATTCCATTTTTGCACTGCTCAGGTTACTGTAAGGATCGATGTTCATCGTTAAGGACCTCAAACTGTTTACCTATGGATGAAAATATGGGATTTAGTACATGTGGGTATGCCTTGGCTGACTTCAAAAATCTTATATTCATACTTCAATAGGAATATATATATTAAAATAGCG

Coding sequence (CDS)

ATGTATGCTGATCGATTGGAGACCGAGACCCATAGGTCGATAAAGGACCGCCTTAATGGAAGCTCTTCCGACCTTTCTACTCGCCGGCGCCCGATTACTGGGAAGAGGCAGAGAGAAGATGACAAGTGGGAGCATGATCTCTATGTGAATGATAAGCCGCAAACTTCAAACCGCAAAGTCGATGCTCGAGATCTCCGCTTGAAGCTCCAAAAGAAAAGTCAGCAACAAAGTGGAACTGCATCATTTTCAGGAGTGCGGGACCTACGTGAAAAGTTATCTGGCACAATGAAGCCACAAGCTGCAAATAATGATCCATCGAAACTAAAATTGGAAGTTACAAAAACATCCCGAAAAAGGGATACTGTCGAAACTCATCCTTCAACCACTCAAAAAGTTAGTGATACATCAGTGAATGACTTCCTACAGTCCTTGGGCCTTGAAAAATATTCCATTACGTTTCAAGCAGAGGAAGTTGATATGACGGCGCTTGTACACATGGGAGATGAAGATCTCAAGGCTTTAGGAGTCCCAATGGGGCCAAGAAAGAAGATCCTTTTGGCATTGGAATCAAGGGTCTGA

Protein sequence

MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKVDARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRDTVETHPSTTQKVSDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV

Homology

[Close]

BLAST of CmaCh17G012700 vs. ExPASy Swiss-Prot
Match: Q9Y6Y8 (SEC23-interacting protein OS=Homo sapiens OX=9606 GN=SEC23IP PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.3e-05
Identity = 23/69 (33.33%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 123 ETHPSTTQKVSDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRK 182
           E++    +     ++ + L++L L +Y  TF+ E++DM +L+    +DLK +G+P+GPRK
Sbjct: 635 ESYDLVVENKEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRK 694

Query: 183 KILLALESR 192
           KI   +E +
Sbjct: 695 KIANFVEHK 703

[Close]

BLAST of CmaCh17G012700 vs. ExPASy Swiss-Prot
Match: Q495M9 (Usher syndrome type-1G protein OS=Homo sapiens OX=9606 GN=USH1G PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.3e-05
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 140 FLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 192
           FL SL +E ++   + E++D+ AL+   D DL+++ VP+GPRKKIL A+  R
Sbjct: 395 FLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRKKILGAVRRR 446

[Close]

BLAST of CmaCh17G012700 vs. ExPASy Swiss-Prot
Match: Q80T11 (Usher syndrome type-1G protein homolog OS=Mus musculus OX=10090 GN=Ush1g PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.4e-05
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 140 FLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 192
           FL SL +E ++   + E++D+ AL+   D DL+++ VP+GPRKKIL A+  R
Sbjct: 395 FLASLHMEDFASLLRHEKIDLEALMLCSDLDLRSISVPLGPRKKILGAVRRR 446

[Close]

BLAST of CmaCh17G012700 vs. ExPASy Swiss-Prot
Match: Q8N8V4 (Ankyrin repeat and SAM domain-containing protein 4B OS=Homo sapiens OX=9606 GN=ANKS4B PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 9.7e-05
Identity = 24/60 (40.00%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 132 VSDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 191
           V  T +  FL S  LE++   F+ E++D+ AL+   DEDL+++ + +GPRKK+L A+  R
Sbjct: 343 VDATPLEVFLLSQHLEEFLPIFKREQIDLEALLLCSDEDLQSIQMQLGPRKKVLNAINRR 402

[Close]

BLAST of CmaCh17G012700 vs. ExPASy Swiss-Prot
Match: Q6NZC7 (SEC23-interacting protein OS=Mus musculus OX=10090 GN=Sec23ip PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 141 LQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKI 185
           L++L L  Y  TF+ E++DM +L+    +DLK +G+P+GPRKKI
Sbjct: 649 LEALSLFDYISTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKI 692

[Close]

BLAST of CmaCh17G012700 vs. ExPASy TrEMBL
Match: A0A6J1JU73 (ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111487935 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.1e-95
Identity = 192/205 (93.66%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV
Sbjct: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
           DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD
Sbjct: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120

Query: 121 TVETHPSTTQKV-------------SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           TVETHPSTTQKV             SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVETHPSTTQKVVGNPATRKKATQKSDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 193
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of CmaCh17G012700 vs. ExPASy TrEMBL
Match: A0A6J1GN02 (ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111455926 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.0e-91
Identity = 185/205 (90.24%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNG+SSDLS+RRRPITGKRQREDDKWEHDLY NDKPQTSN KV
Sbjct: 1   MYADRLETETHRSIKDRLNGNSSDLSSRRRPITGKRQREDDKWEHDLYENDKPQTSNHKV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
           DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD
Sbjct: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120

Query: 121 TVETHPSTTQKV-------------SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           TVET PSTTQKV              DTSV+DFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVETRPSTTQKVVANPATRKKATQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 193
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of CmaCh17G012700 vs. ExPASy TrEMBL
Match: A0A6J1KT08 (ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111497963 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 168/205 (81.95%), Postives = 181/205 (88.29%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRL+ +THRSIKDRLNG+SSDLS RRRPITGKRQR+DDKWEHDLY ND+PQTSNRKV
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
            ARDLRLKLQK+SQQQSG +SFSGVRDLREKLSGTMKPQA N+DP KLKL+V+K +RK D
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKLKLDVSKPTRKND 120

Query: 121 TVETHPSTTQKV-------------SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           +VE  PSTTQKV             SDTSV+DFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 SVEVRPSTTQKVVANPATRKKDAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 193
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of CmaCh17G012700 vs. ExPASy TrEMBL
Match: A0A1S3C7G6 (ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103497565 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.5e-82
Identity = 168/205 (81.95%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRLE + HRSIKDRLNG+SSDLS RRRPITGKRQR+DDKWEHDLY ND+PQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRRV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
            ARDLRLKLQKKSQQQSG A FSGVRDLREKLSGTMKPQAA NDP K KLEVTK  RK D
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAAKNDPPKPKLEVTKAPRKND 120

Query: 121 TVETHPSTTQKV-------------SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
            +E HPSTTQK              SDTSV+DFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 AIEAHPSTTQKAVAKSATRKNAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 193
           D+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 DDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of CmaCh17G012700 vs. ExPASy TrEMBL
Match: A0A0A0K9W5 (SAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.8e-82
Identity = 168/205 (81.95%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRLE + HRSIKDRLNG+SSDLS RRRPITGKRQREDDKWEHDLY ND+PQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTSNRRV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
            ARDLRLKLQKKSQQQSG A FSGVRDLREKLSGTMKPQAANNDP K KLEVTK  RK D
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKAPRKND 120

Query: 121 TVETHPSTTQKV-------------SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
            +E H S+TQK              SDTSV+DFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 AIEAHTSSTQKAVAKSATRKKAAQKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 193
           D+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 DDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of CmaCh17G012700 vs. NCBI nr
Match: XP_022991214.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita maxima])

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-94
Identity = 192/205 (93.66%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV
Sbjct: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
           DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD
Sbjct: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120

Query: 121 TVETHPSTTQKV-------------SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           TVETHPSTTQKV             SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVETHPSTTQKVVGNPATRKKATQKSDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 193
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of CmaCh17G012700 vs. NCBI nr
Match: KAG6575989.1 (Ankyrin repeat and SAM domain-containing protein 4B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90
Identity = 185/205 (90.24%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNG+SSDLS RRRPITGKRQREDDKWEHDLY NDKPQTSNRKV
Sbjct: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
           DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKL+VTKTSRKRD
Sbjct: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRD 120

Query: 121 TVETHPSTTQKV-------------SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           TVET PSTTQKV              DTSV+DFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVETRPSTTQKVVANPATRKKATQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 193
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of CmaCh17G012700 vs. NCBI nr
Match: XP_022953347.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 185/205 (90.24%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNG+SSDLS+RRRPITGKRQREDDKWEHDLY NDKPQTSN KV
Sbjct: 1   MYADRLETETHRSIKDRLNGNSSDLSSRRRPITGKRQREDDKWEHDLYENDKPQTSNHKV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
           DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD
Sbjct: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120

Query: 121 TVETHPSTTQKV-------------SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           TVET PSTTQKV              DTSV+DFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVETRPSTTQKVVANPATRKKATQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 193
           DEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 DEDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of CmaCh17G012700 vs. NCBI nr
Match: XP_023547437.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 183/205 (89.27%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNG+SSDLS RRRPITGKR+REDDKWEHDLY NDKPQTSNRKV
Sbjct: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRRREDDKWEHDLYENDKPQTSNRKV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
           DARDLRLKLQKKSQQQSG ASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD
Sbjct: 61  DARDLRLKLQKKSQQQSGAASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120

Query: 121 TVETHPSTTQKV-------------SDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMG 180
           TVET PSTTQKV              DTSV+DFLQSLGLEKYSITFQAEEVDMTALVHMG
Sbjct: 121 TVETRPSTTQKVVANPATRKRATQKGDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMG 180

Query: 181 DEDLKALGVPMGPRKKILLALESRV 193
           DEDLKALGVPMGPRKKILLALE+RV
Sbjct: 181 DEDLKALGVPMGPRKKILLALETRV 205

[Close]

BLAST of CmaCh17G012700 vs. NCBI nr
Match: KAG7014512.1 (hypothetical protein SDJN02_24690, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83
Identity = 169/178 (94.94%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 1   MYADRLETETHRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNRKV 60
           MYADRLETETHRSIKDRLNG+SSDLS RRRPITGKRQREDDKWEHDLY NDKPQTSNRKV
Sbjct: 1   MYADRLETETHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDKPQTSNRKV 60

Query: 61  DARDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSRKRD 120
           D RDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKL+VTKTSRKRD
Sbjct: 61  DTRDLRLKLQKKSQQQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLDVTKTSRKRD 120

Query: 121 TVETHPSTTQKVSDTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPM 179
           TVET PSTTQK  DTSV+DFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPM
Sbjct: 121 TVETRPSTTQK-GDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPM 177

[Close]

BLAST of CmaCh17G012700 vs. TAIR 10
Match: AT3G07170.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 213.0 bits (541), Expect = 2.1e-55
Identity = 121/202 (59.90%), Postives = 149/202 (73.76%), Query Frame = 0


Query: 1   MYADRLETE--THRSIKDRLNGSSSDLSTRRRPITGKRQREDDKWEHDLYVNDKPQTSNR 60
           MYAD+LE E  + + +KDR+NG S D+STR R +TGKRQR+DDKWEHDL+ +DKPQ SNR
Sbjct: 1   MYADKLEAESGSRKVVKDRINGGSGDISTRVRQVTGKRQRQDDKWEHDLFSSDKPQLSNR 60

Query: 61  KVDARDLRLKLQKKSQ-QQSGTASFSGVRDLREKLSGTMKPQAANNDPSKLKLEVTKTSR 120
           +VD RDLRLKLQK+    QSG  + SGVRDLR++LSGTM  Q  N+DP K K E  + S 
Sbjct: 61  RVDPRDLRLKLQKRHHGSQSGREAGSGVRDLRDQLSGTMNQQPKNSDPPKSKAEAARPSM 120

Query: 121 K-----RDTVETHPSTTQKVS---DTSVNDFLQSLGLEKYSITFQAEEVDMTALVHMGDE 180
           K      +T +T    T+K S   D+SV+ FL+SLGLEKYS  FQ EEVDM AL+HM D+
Sbjct: 121 KSVATETETRKTSSQATRKKSQQADSSVDSFLESLGLEKYSTAFQVEEVDMDALMHMTDD 180

Query: 181 DLKALGVPMGPRKKILLALESR 192
           DLKA+ +PMGPRKKILLAL S+
Sbjct: 181 DLKAMLIPMGPRKKILLALGSK 202

[Close]

BLAST of CmaCh17G012700 vs. TAIR 10
Match: AT5G48680.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 155.6 bits (392), Expect = 4.0e-38
Identity = 107/206 (51.94%), Postives = 137/206 (66.50%), Query Frame = 0


Query: 1   MYADRL--ETETHRSIKDRLNGSSSDLSTR--RRPITGKRQR-EDDKWEHDLYV-NDKPQ 60
           MY+D +  ET+  ++ K+RLNG S D S+R  ++ +T KR R +DDKWEHDL+  +D+P+
Sbjct: 1   MYSDLVVAETKISKTFKNRLNGGSGDFSSRGKQQQVTRKRGRQDDDKWEHDLFEDDDEPR 60

Query: 61  TSNRKVDARDLRLKLQKKSQ-QQSGTASFS-GVRDLREKLSGTMKPQAANNDPSKLKLEV 120
            S R+VD +DLRLKLQKK    Q G   FS  V DLR+KLS T+ PQ  N+     K E 
Sbjct: 61  LSKRRVDPKDLRLKLQKKRHGSQIGGRVFSVSVADLRDKLSRTVNPQTKNS-----KREA 120

Query: 121 TKTSRKRDTVETHPST-------TQK---VSDTSVNDFLQSLGLEKYSITFQAEEVDMTA 180
            + + K+ +V T P T       T+K    +D SV+ FL+SLGLEKYS  FQ EEVDM A
Sbjct: 121 VRPAIKKVSVGTKPETRAAPNRATKKDPQQNDASVDSFLESLGLEKYSTAFQVEEVDMDA 180

Query: 181 LVHMGDEDLKALGVPMGPRKKILLAL 189
           L HM D+DLKAL +PMGPRKKILLAL
Sbjct: 181 LRHMTDDDLKALLIPMGPRKKILLAL 201

[Close]

BLAST of CmaCh17G012700 vs. TAIR 10
Match: AT1G70180.2 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 136 SVNDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALES 191
           SV+ FL S+GL KYS+ F+ EEVDMT +  M + DLK L +PMGPRKKIL A+ S
Sbjct: 402 SVDGFLNSIGLGKYSLAFKREEVDMTTIKQMKESDLKDLIIPMGPRKKILQAIAS 456

[Close]

BLAST of CmaCh17G012700 vs. TAIR 10
Match: AT1G70180.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-06
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 136 SVNDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPM 179
           SV+ FL S+GL KYS+ F+ EEVDMT +  M + DLK L +PM
Sbjct: 402 SVDGFLNSIGLGKYSLAFKREEVDMTTIKQMKESDLKDLIIPM 444

The following BLAST results are available for this feature:

BLAST of CmaCh17G012700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y6Y8	4.3e-05	33.33	SEC23-interacting protein OS=Homo sapiens OX=9606 GN=SEC23IP PE=1 SV=1	[more]
Q495M9	4.3e-05	44.23	Usher syndrome type-1G protein OS=Homo sapiens OX=9606 GN=USH1G PE=1 SV=1	[more]
Q80T11	7.4e-05	44.23	Usher syndrome type-1G protein homolog OS=Mus musculus OX=10090 GN=Ush1g PE=1 SV...	[more]
Q8N8V4	9.7e-05	40.00	Ankyrin repeat and SAM domain-containing protein 4B OS=Homo sapiens OX=9606 GN=A...	[more]
Q6NZC7	1.7e-04	47.73	SEC23-interacting protein OS=Mus musculus OX=10090 GN=Sec23ip PE=1 SV=2	[more]

BLAST of CmaCh17G012700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JU73	6.1e-95	93.66	ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1GN02	7.0e-91	90.24	ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita moschata OX...	[more]
A0A6J1KT08	1.6e-82	81.95	ankyrin repeat and SAM domain-containing protein 6-like OS=Cucurbita maxima OX=3...	[more]
A0A1S3C7G6	3.5e-82	81.95	ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0K9W5	7.8e-82	81.95	SAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV...	[more]

BLAST of CmaCh17G012700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991214.1	1.3e-94	93.66	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita maxima]	[more]
KAG6575989.1	1.1e-90	90.24	Ankyrin repeat and SAM domain-containing protein 4B, partial [Cucurbita argyrosp...	[more]
XP_022953347.1	1.5e-90	90.24	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata]	[more]
XP_023547437.1	1.2e-89	89.27	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita pepo subsp. p...	[more]
KAG7014512.1	1.7e-83	94.94	hypothetical protein SDJN02_24690, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh17G012700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07170.1	2.1e-55	59.90	Sterile alpha motif (SAM) domain-containing protein	[more]
AT5G48680.1	4.0e-38	51.94	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G70180.2	1.9e-11	60.00	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G70180.1	1.8e-06	55.81	Sterile alpha motif (SAM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	SMART	SM00454	SAM_4	coord: 129..192 e-value: 1.0E-7 score: 41.6
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 132..189 e-value: 1.6E-15 score: 57.2
IPR001660	Sterile alpha motif domain	PROSITE	PS50105	SAM_DOMAIN	coord: 132..192 score: 10.583908
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 134..192 e-value: 3.4E-25 score: 89.6
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 134..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..131
None	No IPR available	PANTHER	PTHR23509	PA-PL1 PHOSPHOLIPASE FAMILY	coord: 123..179 coord: 1..130
None	No IPR available	PANTHER	PTHR23509:SF38	OSJNBA0060P14.15 PROTEIN	coord: 123..179 coord: 1..130
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 136..189 e-value: 1.65647E-16 score: 68.4201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G012700.1	CmaCh17G012700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding