CmaCh17G012450 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G012450
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box/kelch-repeat protein
Location	Cma_Chr17: 8514570 .. 8515867 (-)
RNA-Seq Expression	CmaCh17G012450
Synteny	CmaCh17G012450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAATTTTCCAACCTCACCTCCGACTCGAAGGACAATCAGTTCTTTGCCTTCGATCCTCTCTCTGATCTCTGGTTCCGCCTCCCCCCGGTGCCGGTCTCTCCTGTCTCCTCCTTCCTTCGCTCCGACGGCTTCTTCTTCACTACCGCGCCTCACTTCTCTTTCTCTCCGATCTTCAATCCCTCTTGGATCGTCACTTCGCCTCTCAGATTCGCACGGATAGATCCTCTCCTCGGAATTTTCCGATCCGGATCCAAGTCGAATCTCCAGTTTATCGTCGTCGAAGGCGTACGACTGCTAGGCGGCCGCCCATTTATCTGTCGAGATTTACGATCCGGACGCTGATTTTTGGGAGCTCTATTCGCCATTGCCCCCGGATTTCAGGTCCGGAATCTCCTCGCGCTCTCTCTCTTCCGCTTTGTTCGAAGGTAAGTTCTACGTTCTCGGAAGTCACTCCTCCTTAGTTTCTTGCTTCGATTTACACGATCATGTATGGAGTGAAGTCCAAACTCTTCAACCTCCTGGAAATATGTTTTCATTTTTAATTTCTTGCACCGACCGCCTTGTTTTGGCGGGACTCTGCAATTCCCCTGCCGGTCCTTCCTTCGTTCTGTGGAAAATTGATGTGGAGACCATGGAATTCCTCGAGATTTCCGTCACGCCGAGCGATCTGCGTGAGAATGGAAATGAAATGCGTTGGACAGGAGAATCTGATCTACGTTTTTAGCGAGGACTATGAAACGAAATATTCAGGGTGTGTTCGTGAAATCAGCCGTGAGAATGTGAAAGTGCAGGGGGAAAAGAGTGCCTCCATTGTCAGTGTGCACAACATTCTCGGCCGAGAGGACGAAGAAGGTCAACATTACTCCTCATTCTGCCATGTCCGAGTGCCATGTCCGAGGTAAGCTTATAAATATTATTTTTCTTTTCGAAGAGAGAGAGAGAAAAAAAAAACCCTATTTAGCAAACTGACTCTCGCACGCCAAGCCTACTCACTCACCAAAGAAGCCCTCATCTTGTCCAAATTCATCGGCTGCCCCCATATCCTGCAGCTCATCGGCCACCAAGTCACCGTCGAAGACGACACCAAGTACAGCGTTTACAATCTGGTTTTGGAGTACACCGCCGGTGGGTCTTTGGATGACCTTATCAACCAACGCAAGAAGCTGCGGGAGGATGAGCTCAAAGGGTATCTTCGTATGATGCTTACAGGGCTTTCTTGCATTCATTCCAAAGGCTTTGTGCATTGTGATTTCAAACCTTCTAATGTTCTTGTTTTTTCCCTCTCAACATGA

mRNA sequence

ATGGCTGAATTTTCCAACCTCACCTCCGACTCGAAGGACAATCAGTTCTTTGCCTTCGATCCTCTCTCTGATCTCTGGTTCCGCCTCCCCCCGGTGCCGGTCTCTCCTGTCTCCTCCTTCCTTCGCTCCGACGGCTTCTTCTTCACTACCGCGCCTCACTTCTCTTTCTCTCCGATCTTCAATCCCTCTTGGATCGTCACTTCGCCTCTCAGATTCGCACGGATAGATCCTCTCCTCGGAATTTTCCGATCCGGATCCAAGTCGAATCTCCAGTTTATCGTCGTCGAAGGCCTCTATTCGCCATTGCCCCCGGATTTCAGGTCCGGAATCTCCTCGCGCTCTCTCTCTTCCGCTTTGTTCGAAGGTAAGTTCTACGTTCTCGGAAGTCACTCCTCCTTAGTTTCTTGCTTCGATTTACACGATCATGTATGGAGTGAAGTCCAAACTCTTCAACCTCCTGGAAATATGTTTTCATTTTTAATTTCTTGCACCGACCGCCTTGTTTTGGCGGGACTCTGCAATTCCCCTGCCGGTCCTTCCTTCGTTCTGTGGAAAATTGATGTGGAGACCATGGAATTCCTCGAGATTTCCGTCACGCCGAGCGATCTGCGTGAGAATGGAAATGAAATGCGTTGGACAGGAGAATCTGATCTACGGGGAAAAGAGTGCCTCCATTGTCAGTGTGCACAACATTCTCGGCCGAGAGGACGAAGAAGGTCAACATTACTCCTCATTCTGCCATGTCCGAGTGCCATGTCCGAGCTCATCGGCCACCAAGTCACCGTCGAAGACGACACCAAGTACAGCGTTTACAATCTGGTTTTGGAGTACACCGCCGGTGGGTCTTTGGATGACCTTATCAACCAACGCAAGAAGCTGCGGGAGGATGAGCTCAAAGGGTATCTTCGTATGATGCTTACAGGGCTTTCTTGCATTCATTCCAAAGGCTTTGTGCATTGTGATTTCAAACCTTCTAATGTTCTTGTTTTTTCCCTCTCAACATGA

Coding sequence (CDS)

ATGGCTGAATTTTCCAACCTCACCTCCGACTCGAAGGACAATCAGTTCTTTGCCTTCGATCCTCTCTCTGATCTCTGGTTCCGCCTCCCCCCGGTGCCGGTCTCTCCTGTCTCCTCCTTCCTTCGCTCCGACGGCTTCTTCTTCACTACCGCGCCTCACTTCTCTTTCTCTCCGATCTTCAATCCCTCTTGGATCGTCACTTCGCCTCTCAGATTCGCACGGATAGATCCTCTCCTCGGAATTTTCCGATCCGGATCCAAGTCGAATCTCCAGTTTATCGTCGTCGAAGGCCTCTATTCGCCATTGCCCCCGGATTTCAGGTCCGGAATCTCCTCGCGCTCTCTCTCTTCCGCTTTGTTCGAAGGTAAGTTCTACGTTCTCGGAAGTCACTCCTCCTTAGTTTCTTGCTTCGATTTACACGATCATGTATGGAGTGAAGTCCAAACTCTTCAACCTCCTGGAAATATGTTTTCATTTTTAATTTCTTGCACCGACCGCCTTGTTTTGGCGGGACTCTGCAATTCCCCTGCCGGTCCTTCCTTCGTTCTGTGGAAAATTGATGTGGAGACCATGGAATTCCTCGAGATTTCCGTCACGCCGAGCGATCTGCGTGAGAATGGAAATGAAATGCGTTGGACAGGAGAATCTGATCTACGGGGAAAAGAGTGCCTCCATTGTCAGTGTGCACAACATTCTCGGCCGAGAGGACGAAGAAGGTCAACATTACTCCTCATTCTGCCATGTCCGAGTGCCATGTCCGAGCTCATCGGCCACCAAGTCACCGTCGAAGACGACACCAAGTACAGCGTTTACAATCTGGTTTTGGAGTACACCGCCGGTGGGTCTTTGGATGACCTTATCAACCAACGCAAGAAGCTGCGGGAGGATGAGCTCAAAGGGTATCTTCGTATGATGCTTACAGGGCTTTCTTGCATTCATTCCAAAGGCTTTGTGCATTGTGATTTCAAACCTTCTAATGTTCTTGTTTTTTCCCTCTCAACATGA

Protein sequence

MAEFSNLTSDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIFNPSWIVTSPLRFARIDPLLGIFRSGSKSNLQFIVVEGLYSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMFSFLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDLRENGNEMRWTGESDLRGKECLHCQCAQHSRPRGRRRSTLLLILPCPSAMSELIGHQVTVEDDTKYSVYNLVLEYTAGGSLDDLINQRKKLREDELKGYLRMMLTGLSCIHSKGFVHCDFKPSNVLVFSLST

Homology

[Close]

BLAST of CmaCh17G012450 vs. ExPASy Swiss-Prot
Match: Q3EB08 (F-box/kelch-repeat protein At3g24760 OS=Arabidopsis thaliana OX=3702 GN=At3g24760 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.8e-43
Identity = 102/222 (45.95%), Postives = 131/222 (59.01%), Query Frame = 0


Query: 9   SDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIFNPSWIVTS 68
           + S  NQ FAFDPLS+ W RLPP   S     + S+ F FTTAP FSFSPI  P+W  TS
Sbjct: 72  TSSFHNQSFAFDPLSNTWLRLPP-SSSSSDHLVGSNRFLFTTAPRFSFSPILKPNWRFTS 131

Query: 69  PLRFARIDPLLGIFRSGSKSNLQFIVVEG---------------------------LYSP 128
           P+RF RI+PLL +F + S S+ + I+V G                           L SP
Sbjct: 132 PVRFPRINPLLTVFTTLSNSS-KLILVGGSSRIGGLVDIEERLAVQIYDPVLDSWELCSP 191

Query: 129 LPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMFSFLI 188
           LP DFRSG   ++L+SALF+ +FYV  ++S  +S F L  + WS+VQTL+PPG  F++L 
Sbjct: 192 LPADFRSGQDHQTLTSALFKRRFYVFDNYSCFISSFCLDSYTWSDVQTLKPPGLSFAYLN 251

Query: 189 SCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDL 204
           SC   LVL G+C    G SF LW I+  +MEF EI+V P DL
Sbjct: 252 SCNGMLVLGGMC----GFSFNLWSIEEGSMEFSEIAVMPEDL 287

[Close]

BLAST of CmaCh17G012450 vs. ExPASy Swiss-Prot
Match: F4JY37 (Serine/threonine-protein kinase RUNKEL OS=Arabidopsis thaliana OX=3702 GN=RUK PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.8e-07
Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 273 LVLEYTAGGSLDDLINQRKKLREDELKGYLRMMLTGLSCIHSKGFVHCDFKPSNVLV 330
           LVLEY  GG L  L+ Q  KL E+ + G    ++  L  +HSKG ++CD KPSN+L+
Sbjct: 73  LVLEYCVGGDLRTLLQQDCKLPEESIYGLAYDLVIALQYLHSKGIIYCDLKPSNILL 129

[Close]

BLAST of CmaCh17G012450 vs. ExPASy Swiss-Prot
Match: F1QGZ6 (Maternal embryonic leucine zipper kinase OS=Danio rerio OX=7955 GN=melk PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.6e-07
Identity = 25/65 (38.46%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 265 DTKYSVYNLVLEYTAGGSLDDLINQRKKLREDELKGYLRMMLTGLSCIHSKGFVHCDFKP 324
           +T   +Y +VLEY  GG L D I  + +L E+E + + R +++ L+ +HS+G+ H D KP
Sbjct: 79  ETTSKIY-MVLEYCPGGELFDYIIAKDRLSEEETRVFFRQIISALAYVHSQGYAHRDLKP 138

Query: 325 SNVLV 330
            N+L+
Sbjct: 139 ENLLI 142

[Close]

BLAST of CmaCh17G012450 vs. ExPASy Swiss-Prot
Match: U4PR86 (Maternal embryonic leucine zipper kinase OS=Caenorhabditis elegans OX=6239 GN=pig-1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.7e-07
Identity = 23/72 (31.94%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 258 HQVTVEDDTKYSVYNLVLEYTAGGSLDDLINQRKKLREDELKGYLRMMLTGLSCIHSKGF 317
           H +  ED      + +V+EY +GG + D I ++++L E E + + R +++ ++ +HS+G+
Sbjct: 74  HYIETEDK-----FFIVMEYCSGGEMFDYIVRKERLEESEARHFFRQLVSAIAFVHSQGY 133

Query: 318 VHCDFKPSNVLV 330
            H D KP N+L+
Sbjct: 134 AHRDLKPENLLL 140

[Close]

BLAST of CmaCh17G012450 vs. ExPASy Swiss-Prot
Match: Q28GW8 (Maternal embryonic leucine zipper kinase OS=Xenopus tropicalis OX=8364 GN=melk PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.7e-07
Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 273 LVLEYTAGGSLDDLINQRKKLREDELKGYLRMMLTGLSCIHSKGFVHCDFKPSNVLV 330
           +VLEY  GG L D I  + +L EDE + + R +++ ++ IHS+G+ H D KP N+L+
Sbjct: 86  MVLEYCPGGELFDYIIAKDRLTEDEARVFFRQIVSAVAYIHSQGYAHRDLKPENLLI 142

[Close]

BLAST of CmaCh17G012450 vs. ExPASy TrEMBL
Match: A0A6J1JRA4 (LOW QUALITY PROTEIN: F-box/kelch-repeat protein At3g24760 OS=Cucurbita maxima OX=3661 GN=LOC111488190 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 7.3e-120
Identity = 219/242 (90.50%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 1   MAEFSNLTSDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIF 60
           MAEFSNLTSDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIF
Sbjct: 1   MAEFSNLTSDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIF 60

Query: 61  NPSWIVTSPLRFARIDPLLGIFRSGSKSNLQFIVVEG----------------------- 120
           NPSWIVTSPLRFARIDPLLGIFRSGSKSNLQFIVVEG                       
Sbjct: 61  NPSWIVTSPLRFARIDPLLGIFRSGSKSNLQFIVVEGVRLLGGXAHLSVEIYDPDADFWE 120

Query: 121 LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMF 180
           LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMF
Sbjct: 121 LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMF 180

Query: 181 SFLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDLRENGNEMRWTGESD 220
           SFLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDLRENGNEMRWTGESD
Sbjct: 181 SFLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDLRENGNEMRWTGESD 240

[Close]

BLAST of CmaCh17G012450 vs. ExPASy TrEMBL
Match: A0A6J1GNQ9 (LOW QUALITY PROTEIN: F-box/kelch-repeat protein At3g24760 OS=Cucurbita moschata OX=3662 GN=LOC111456133 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 3.3e-80
Identity = 160/208 (76.92%), Postives = 169/208 (81.25%), Query Frame = 0


Query: 34  VSPVSSFLRSDGFFFTTAPHFSFSPIFNPSWIVTSPLRFARIDPLLGIFRSGSKSNLQFI 93
           +S  SSFL SDGFFFTTAPHFSFSPIFNPSW +TSPLRFAR+DPLLGIFRSGSKSNLQF 
Sbjct: 34  ISGSSSFLGSDGFFFTTAPHFSFSPIFNPSWTITSPLRFARMDPLLGIFRSGSKSNLQFT 93

Query: 94  VVEG-----------------------LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSH 153
           VVEG                       LYSPLPPD  SGISSRSLSSALFEGKFYVLGS+
Sbjct: 94  VVEGVRLLGGXAHLSVEIYDPDADFXELYSPLPPD-XSGISSRSLSSALFEGKFYVLGSY 153

Query: 154 SSLVSCFDLHDHVWSEVQTLQPPGNMFSFLISCTDRLVLAGLCNSPAGPSFVLWKIDVET 213
           S LVSCFDLHDHVWSEVQTLQPPG +FSFLISCTDRLV AGLCNSPAGPSFVLWKIDVET
Sbjct: 154 SFLVSCFDLHDHVWSEVQTLQPPGVVFSFLISCTDRLVSAGLCNSPAGPSFVLWKIDVET 213

Query: 214 MEFLEISVTPSDLRENGNEMRWTGESDL 219
           MEFLEISV PSDLRENG + +  G+ +L
Sbjct: 214 MEFLEISVMPSDLRENG-KXKCVGQENL 239

[Close]

BLAST of CmaCh17G012450 vs. ExPASy TrEMBL
Match: A0A2P5BT69 (F-box domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_212080 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.9e-60
Identity = 126/226 (55.75%), Postives = 155/226 (68.58%), Query Frame = 0


Query: 9   SDSKDNQFFAFDPLSDLWFRLPPVPV---SPVSS-FLRSDGFFFTTAPHFSFSPIFNPSW 68
           + SK+NQ FAFDP+S+LWFRLP +P     P SS FL +DGFF TTAP+F++S I   +W
Sbjct: 66  TSSKNNQSFAFDPVSNLWFRLPVLPTRHHQPTSSCFLGADGFFLTTAPNFAYSRILKRAW 125

Query: 69  IVTSPLRFARIDPLLGIFRSGSKSNLQFIVVEG--------------------------- 128
            VT PLRF+RI+PLLG+   GS+   +FIVV G                           
Sbjct: 126 RVTPPLRFSRINPLLGVSDDGSRRVPRFIVVGGVRFIGNLVDIEDRLAVEIYNPDSDSWD 185

Query: 129 LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMF 188
           L+ PLP DFRSG SS+SLSSALF G+FYV G +S  +S FDL  HVWSEVQTL+PPG +F
Sbjct: 186 LFPPLPADFRSGNSSQSLSSALFRGRFYVFGIYSCFLSSFDLAQHVWSEVQTLRPPGVVF 245

Query: 189 SFLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDL 204
           SFLI+C DRLVLAG+CN+P GPSF LW+ID +TMEF EI++ P DL
Sbjct: 246 SFLIACQDRLVLAGICNAPVGPSFNLWRIDEKTMEFSEIAIMPQDL 291

[Close]

BLAST of CmaCh17G012450 vs. ExPASy TrEMBL
Match: A0A6P6A1M0 (F-box/kelch-repeat protein At3g24760-like OS=Durio zibethinus OX=66656 GN=LOC111305388 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.0e-60
Identity = 124/224 (55.36%), Postives = 152/224 (67.86%), Query Frame = 0


Query: 9   SDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIFNPSWIVTS 68
           + S++NQ FAFDPLS+ WFRLP +  S  SSFL S GFFFTT P FS++P+   +W +TS
Sbjct: 68  TSSRNNQSFAFDPLSNSWFRLPHLDDSSSSSFLGSHGFFFTTTPKFSYTPVLKSTWRLTS 127

Query: 69  PLRFARIDPLLGIFRSGSKS--NLQFIVVEG-----------------LYSP-------- 128
           PL+++RI+PLLG+F  GS      +FIVV G                 +Y P        
Sbjct: 128 PLKYSRINPLLGVFHDGSSGGYGFKFIVVGGVRFIGGLVDMEDRLAVEIYDPNHDSWELC 187

Query: 129 --LPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMFSF 188
             LP DFRSG SS+SLSSALF+GKFYV G +S  VS FDL +HVWS+VQTL+PPG +FSF
Sbjct: 188 PALPADFRSGNSSQSLSSALFKGKFYVFGIYSCFVSSFDLQNHVWSDVQTLRPPGVIFSF 247

Query: 189 LISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDL 204
           LISC D LVLAG+CN+P GPSF LWKID  TMEF EI++ P  L
Sbjct: 248 LISCNDMLVLAGMCNAPRGPSFNLWKIDERTMEFSEIAIMPQSL 291

[Close]

BLAST of CmaCh17G012450 vs. ExPASy TrEMBL
Match: A0A061DNF6 (Galactose oxidase/kelch repeat superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_002987 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.5e-59
Identity = 123/224 (54.91%), Postives = 152/224 (67.86%), Query Frame = 0


Query: 9   SDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIFNPSWIVTS 68
           + SK+NQ FAFDPLS+ WFRLP +  S  SS L S+GFFFTT P FS++P+   +W +TS
Sbjct: 68  TSSKNNQSFAFDPLSNTWFRLPHLDDSSSSSLLGSNGFFFTTTPKFSYTPVLKTTWRLTS 127

Query: 69  PLRFARIDPLLGIFRSGSKS--NLQFIVVEG-----------------LYSP-------- 128
           PL+++RI+PL+G+F  GS      +FIVV G                 +Y P        
Sbjct: 128 PLKYSRINPLVGVFLDGSSGGYGFKFIVVGGVRFIGGLVDIEDRLAVEIYDPNHDSWELC 187

Query: 129 --LPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMFSF 188
             LP DFR+G SS+SLSSALF+GKFYV G +S  VS FDL DHVWSEVQTL+PPG +FSF
Sbjct: 188 PALPADFRTGNSSQSLSSALFKGKFYVFGIYSCFVSSFDLQDHVWSEVQTLRPPGVIFSF 247

Query: 189 LISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDL 204
           LISC + LVLAG+CN+P GPSF LWKID  TMEF EI++ P  L
Sbjct: 248 LISCNEMLVLAGMCNAPRGPSFNLWKIDERTMEFSEIAIMPQSL 291

[Close]

BLAST of CmaCh17G012450 vs. NCBI nr
Match: XP_022991631.1 (LOW QUALITY PROTEIN: F-box/kelch-repeat protein At3g24760 [Cucurbita maxima])

HSP 1 Score: 440.3 bits (1131), Expect = 1.5e-119
Identity = 219/242 (90.50%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 1   MAEFSNLTSDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIF 60
           MAEFSNLTSDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIF
Sbjct: 1   MAEFSNLTSDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIF 60

Query: 61  NPSWIVTSPLRFARIDPLLGIFRSGSKSNLQFIVVEG----------------------- 120
           NPSWIVTSPLRFARIDPLLGIFRSGSKSNLQFIVVEG                       
Sbjct: 61  NPSWIVTSPLRFARIDPLLGIFRSGSKSNLQFIVVEGVRLLGGXAHLSVEIYDPDADFWE 120

Query: 121 LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMF 180
           LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMF
Sbjct: 121 LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMF 180

Query: 181 SFLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDLRENGNEMRWTGESD 220
           SFLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDLRENGNEMRWTGESD
Sbjct: 181 SFLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDLRENGNEMRWTGESD 240

[Close]

BLAST of CmaCh17G012450 vs. NCBI nr
Match: XP_022953676.1 (LOW QUALITY PROTEIN: F-box/kelch-repeat protein At3g24760 [Cucurbita moschata])

HSP 1 Score: 308.5 bits (789), Expect = 6.9e-80
Identity = 160/208 (76.92%), Postives = 169/208 (81.25%), Query Frame = 0


Query: 34  VSPVSSFLRSDGFFFTTAPHFSFSPIFNPSWIVTSPLRFARIDPLLGIFRSGSKSNLQFI 93
           +S  SSFL SDGFFFTTAPHFSFSPIFNPSW +TSPLRFAR+DPLLGIFRSGSKSNLQF 
Sbjct: 34  ISGSSSFLGSDGFFFTTAPHFSFSPIFNPSWTITSPLRFARMDPLLGIFRSGSKSNLQFT 93

Query: 94  VVEG-----------------------LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSH 153
           VVEG                       LYSPLPPD  SGISSRSLSSALFEGKFYVLGS+
Sbjct: 94  VVEGVRLLGGXAHLSVEIYDPDADFXELYSPLPPD-XSGISSRSLSSALFEGKFYVLGSY 153

Query: 154 SSLVSCFDLHDHVWSEVQTLQPPGNMFSFLISCTDRLVLAGLCNSPAGPSFVLWKIDVET 213
           S LVSCFDLHDHVWSEVQTLQPPG +FSFLISCTDRLV AGLCNSPAGPSFVLWKIDVET
Sbjct: 154 SFLVSCFDLHDHVWSEVQTLQPPGVVFSFLISCTDRLVSAGLCNSPAGPSFVLWKIDVET 213

Query: 214 MEFLEISVTPSDLRENGNEMRWTGESDL 219
           MEFLEISV PSDLRENG + +  G+ +L
Sbjct: 214 MEFLEISVMPSDLRENG-KXKCVGQENL 239

[Close]

BLAST of CmaCh17G012450 vs. NCBI nr
Match: KAF3436009.1 (hypothetical protein FNV43_RR23101 [Rhamnella rubrinervis])

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-60
Identity = 132/225 (58.67%), Postives = 153/225 (68.00%), Query Frame = 0


Query: 9   SDSKDNQFFAFDPLSDLWFRLPPVPV--SPVSS-FLRSDGFFFTTAPHFSFSPIFNPSWI 68
           + SK+NQ FAFDPLS+LWFRLP  P+   P SS FL +DGFF TTAP+F +S I   SW 
Sbjct: 66  TSSKNNQSFAFDPLSNLWFRLPTFPIHHQPASSCFLGADGFFLTTAPNFGYSRILKRSWR 125

Query: 69  VTSPLRFARIDPLLGIFRSGSKSNLQFIVVEG---------------------------L 128
            TSPLRF+RI+PLLG+F  GS    +FIVV G                           L
Sbjct: 126 ATSPLRFSRINPLLGVFGDGS-GLPKFIVVGGVRFIGNLVDIEDRLAVEIYNPHLDSWEL 185

Query: 129 YSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMFS 188
             PLP DFRSG SS+SLSSALF G+FYV G +S  VS FDL  HVWSEVQTL+PPG +FS
Sbjct: 186 CPPLPADFRSGNSSQSLSSALFGGRFYVFGIYSCFVSSFDLLKHVWSEVQTLRPPGVVFS 245

Query: 189 FLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDL 204
           FLI+C DRLVLAG+CN+P GPSF LWKID ETMEF EI++ P DL
Sbjct: 246 FLIACQDRLVLAGICNAPVGPSFNLWKIDEETMEFSEIAIMPQDL 289

[Close]

BLAST of CmaCh17G012450 vs. NCBI nr
Match: PON51965.1 (F-box domain containing protein [Parasponia andersonii])

HSP 1 Score: 242.3 bits (617), Expect = 6.1e-60
Identity = 126/226 (55.75%), Postives = 155/226 (68.58%), Query Frame = 0


Query: 9   SDSKDNQFFAFDPLSDLWFRLPPVPV---SPVSS-FLRSDGFFFTTAPHFSFSPIFNPSW 68
           + SK+NQ FAFDP+S+LWFRLP +P     P SS FL +DGFF TTAP+F++S I   +W
Sbjct: 66  TSSKNNQSFAFDPVSNLWFRLPVLPTRHHQPTSSCFLGADGFFLTTAPNFAYSRILKRAW 125

Query: 69  IVTSPLRFARIDPLLGIFRSGSKSNLQFIVVEG--------------------------- 128
            VT PLRF+RI+PLLG+   GS+   +FIVV G                           
Sbjct: 126 RVTPPLRFSRINPLLGVSDDGSRRVPRFIVVGGVRFIGNLVDIEDRLAVEIYNPDSDSWD 185

Query: 129 LYSPLPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMF 188
           L+ PLP DFRSG SS+SLSSALF G+FYV G +S  +S FDL  HVWSEVQTL+PPG +F
Sbjct: 186 LFPPLPADFRSGNSSQSLSSALFRGRFYVFGIYSCFLSSFDLAQHVWSEVQTLRPPGVVF 245

Query: 189 SFLISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDL 204
           SFLI+C DRLVLAG+CN+P GPSF LW+ID +TMEF EI++ P DL
Sbjct: 246 SFLIACQDRLVLAGICNAPVGPSFNLWRIDEKTMEFSEIAIMPQDL 291

[Close]

BLAST of CmaCh17G012450 vs. NCBI nr
Match: XP_022758625.1 (F-box/kelch-repeat protein At3g24760-like [Durio zibethinus])

HSP 1 Score: 241.5 bits (615), Expect = 1.0e-59
Identity = 124/224 (55.36%), Postives = 152/224 (67.86%), Query Frame = 0


Query: 9   SDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIFNPSWIVTS 68
           + S++NQ FAFDPLS+ WFRLP +  S  SSFL S GFFFTT P FS++P+   +W +TS
Sbjct: 68  TSSRNNQSFAFDPLSNSWFRLPHLDDSSSSSFLGSHGFFFTTTPKFSYTPVLKSTWRLTS 127

Query: 69  PLRFARIDPLLGIFRSGSKS--NLQFIVVEG-----------------LYSP-------- 128
           PL+++RI+PLLG+F  GS      +FIVV G                 +Y P        
Sbjct: 128 PLKYSRINPLLGVFHDGSSGGYGFKFIVVGGVRFIGGLVDMEDRLAVEIYDPNHDSWELC 187

Query: 129 --LPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMFSF 188
             LP DFRSG SS+SLSSALF+GKFYV G +S  VS FDL +HVWS+VQTL+PPG +FSF
Sbjct: 188 PALPADFRSGNSSQSLSSALFKGKFYVFGIYSCFVSSFDLQNHVWSDVQTLRPPGVIFSF 247

Query: 189 LISCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDL 204
           LISC D LVLAG+CN+P GPSF LWKID  TMEF EI++ P  L
Sbjct: 248 LISCNDMLVLAGMCNAPRGPSFNLWKIDERTMEFSEIAIMPQSL 291

[Close]

BLAST of CmaCh17G012450 vs. TAIR 10
Match: AT3G24760.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-44
Identity = 102/222 (45.95%), Postives = 131/222 (59.01%), Query Frame = 0


Query: 9   SDSKDNQFFAFDPLSDLWFRLPPVPVSPVSSFLRSDGFFFTTAPHFSFSPIFNPSWIVTS 68
           + S  NQ FAFDPLS+ W RLPP   S     + S+ F FTTAP FSFSPI  P+W  TS
Sbjct: 72  TSSFHNQSFAFDPLSNTWLRLPP-SSSSSDHLVGSNRFLFTTAPRFSFSPILKPNWRFTS 131

Query: 69  PLRFARIDPLLGIFRSGSKSNLQFIVVEG---------------------------LYSP 128
           P+RF RI+PLL +F + S S+ + I+V G                           L SP
Sbjct: 132 PVRFPRINPLLTVFTTLSNSS-KLILVGGSSRIGGLVDIEERLAVQIYDPVLDSWELCSP 191

Query: 129 LPPDFRSGISSRSLSSALFEGKFYVLGSHSSLVSCFDLHDHVWSEVQTLQPPGNMFSFLI 188
           LP DFRSG   ++L+SALF+ +FYV  ++S  +S F L  + WS+VQTL+PPG  F++L 
Sbjct: 192 LPADFRSGQDHQTLTSALFKRRFYVFDNYSCFISSFCLDSYTWSDVQTLKPPGLSFAYLN 251

Query: 189 SCTDRLVLAGLCNSPAGPSFVLWKIDVETMEFLEISVTPSDL 204
           SC   LVL G+C    G SF LW I+  +MEF EI+V P DL
Sbjct: 252 SCNGMLVLGGMC----GFSFNLWSIEEGSMEFSEIAVMPEDL 287

[Close]

BLAST of CmaCh17G012450 vs. TAIR 10
Match: AT2G34290.1 (Protein kinase superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-12
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 264 DDTKYSVYNLVLEYTAGGSLDDLINQ--RKKLREDELKGYLRMMLTGLSCIHSKGFVHCD 323
           +D  Y  Y + +EY AGGSL D +++   KKL +  ++ + RM+L GL+ IH  G+VHCD
Sbjct: 71  NDKGYVEYTIPMEYAAGGSLSDFMDRFNDKKLPDPMIRKFTRMLLEGLATIHRHGYVHCD 130

Query: 324 FKPSNVLVF 331
            KP N+LVF
Sbjct: 131 LKPENILVF 139

[Close]

BLAST of CmaCh17G012450 vs. TAIR 10
Match: AT5G27510.1 (Protein kinase superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-12
Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 264 DDTKYSVYNLVLEYTAGGSLDDLINQ--RKKLREDELKGYLRMMLTGLSCIHSKGFVHCD 323
           DD    VY L+LEY + GSL D +N    +KL +  ++ + RM+L GL  IHS G+VHCD
Sbjct: 74  DDKGNRVYKLLLEYASEGSLSDFMNNCVDRKLPDLMIRDFTRMILQGLVSIHSHGYVHCD 133

Query: 324 FKPSNVLVF 331
            KP NVLVF
Sbjct: 134 LKPENVLVF 142

[Close]

BLAST of CmaCh17G012450 vs. TAIR 10
Match: AT4G26890.1 (mitogen-activated protein kinase kinase kinase 16 )

HSP 1 Score: 70.1 bits (170), Expect = 3.8e-12
Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 237 RRRSTLLLILPCPSAMSELIGHQVTVEDDTKYSVYNLVLEYTAGGSLDDLI-NQRKKLRE 296
           ++  ++L  L  P  M + IG  +T E +    VYN+++EY +GG+L DLI N   KL E
Sbjct: 44  QKEQSILSTLSSPH-MVKYIGTGLTRESNG--LVYNILMEYVSGGNLHDLIKNSGGKLPE 103

Query: 297 DELKGYLRMMLTGLSCIHSKGFVHCDFKPSNVLV 330
            E++ Y R +L GL  +H +G VHCD K  NVLV
Sbjct: 104 PEIRSYTRQILNGLVYLHERGIVHCDLKSHNVLV 134

[Close]

BLAST of CmaCh17G012450 vs. TAIR 10
Match: AT2G41920.1 (Protein kinase superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-12
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 264 DDTKYSVYNLVLEYTAGGSLDDLINQRK--KLREDELKGYLRMMLTGLSCIHSKGFVHCD 323
           +D  Y  Y + +EY  GGSL D +++ K  KL +  ++ + RM+L GL+ IH  G+VHCD
Sbjct: 78  NDKGYVEYKIAMEYAFGGSLSDFMDRFKDRKLSDSMIREFTRMLLEGLATIHRHGYVHCD 137

Query: 324 FKPSNVLVFSLS 334
            KP N+LVF  S
Sbjct: 138 LKPENILVFPSS 149

The following BLAST results are available for this feature:

BLAST of CmaCh17G012450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EB08	1.8e-43	45.95	F-box/kelch-repeat protein At3g24760 OS=Arabidopsis thaliana OX=3702 GN=At3g2476...	[more]
F4JY37	2.8e-07	45.61	Serine/threonine-protein kinase RUNKEL OS=Arabidopsis thaliana OX=3702 GN=RUK PE...	[more]
F1QGZ6	3.6e-07	38.46	Maternal embryonic leucine zipper kinase OS=Danio rerio OX=7955 GN=melk PE=2 SV=...	[more]
U4PR86	4.7e-07	31.94	Maternal embryonic leucine zipper kinase OS=Caenorhabditis elegans OX=6239 GN=pi...	[more]
Q28GW8	4.7e-07	42.11	Maternal embryonic leucine zipper kinase OS=Xenopus tropicalis OX=8364 GN=melk P...	[more]

BLAST of CmaCh17G012450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRA4	7.3e-120	90.50	LOW QUALITY PROTEIN: F-box/kelch-repeat protein At3g24760 OS=Cucurbita maxima OX...	[more]
A0A6J1GNQ9	3.3e-80	76.92	LOW QUALITY PROTEIN: F-box/kelch-repeat protein At3g24760 OS=Cucurbita moschata ...	[more]
A0A2P5BT69	2.9e-60	55.75	F-box domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_2...	[more]
A0A6P6A1M0	5.0e-60	55.36	F-box/kelch-repeat protein At3g24760-like OS=Durio zibethinus OX=66656 GN=LOC111...	[more]
A0A061DNF6	1.5e-59	54.91	Galactose oxidase/kelch repeat superfamily protein isoform 1 OS=Theobroma cacao ...	[more]

BLAST of CmaCh17G012450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991631.1	1.5e-119	90.50	LOW QUALITY PROTEIN: F-box/kelch-repeat protein At3g24760 [Cucurbita maxima]	[more]
XP_022953676.1	6.9e-80	76.92	LOW QUALITY PROTEIN: F-box/kelch-repeat protein At3g24760 [Cucurbita moschata]	[more]
KAF3436009.1	1.6e-60	58.67	hypothetical protein FNV43_RR23101 [Rhamnella rubrinervis]	[more]
PON51965.1	6.1e-60	55.75	F-box domain containing protein [Parasponia andersonii]	[more]
XP_022758625.1	1.0e-59	55.36	F-box/kelch-repeat protein At3g24760-like [Durio zibethinus]	[more]

BLAST of CmaCh17G012450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24760.1	1.3e-44	45.95	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G34290.1	2.9e-12	46.38	Protein kinase superfamily protein	[more]
AT5G27510.1	2.9e-12	50.72	Protein kinase superfamily protein	[more]
AT4G26890.1	3.8e-12	42.55	mitogen-activated protein kinase kinase kinase 16	[more]
AT2G41920.1	5.0e-12	44.44	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 269..329 e-value: 5.4E-15 score: 55.5
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 166..334 score: 12.273273
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 252..333 e-value: 1.6E-16 score: 62.3
None	No IPR available	PANTHER	PTHR46301	F-BOX/KELCH-REPEAT PROTEIN	coord: 113..201 coord: 9..97
None	No IPR available	PANTHER	PTHR46301:SF4	F-BOX/KELCH-REPEAT PLANT PROTEIN	coord: 113..201 coord: 9..97
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 86..226 e-value: 3.4E-7 score: 31.6
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 11..202
IPR008271	Serine/threonine-protein kinase, active site	PROSITE	PS00108	PROTEIN_KINASE_ST	coord: 317..329
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 260..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G012450.1	CmaCh17G012450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004672	protein kinase activity