CmaCh17G012300 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G012300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	S-protein homolog
Location	Cma_Chr17: 8461485 .. 8461943 (-)
RNA-Seq Expression	CmaCh17G012300
Synteny	CmaCh17G012300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGGGCTGTGGCTGCATTGTTGCTGGTGACAGTGAGTTTGGTCGGGGCTCACCTTGAGGTTGAGTCTGAGAAGATCAATATAAAGCCGCCACTTTCCAGGTATTACATTCATTTCGTTAACGATCTAAGCATCCTCGGTATGATGGTGCACTGCCAGTCGAAGGACGATGATTTGGGAGTTCATCATTTGCTTAATCGGGGAGATAATTACCAATTTAACTTTAGGGTTAACTTTTGGAGAACAACCCTCTTTTGGTGTGATGTGAATAGGCCGGATGCAAACGTCTCTTTTCAATGCTTTTGGCCTGAGAAGAGGAGCACATGGCTTCGTGATAGATGCCGAGATGGAAATGTAGGAACTTGTATCTGGAAGTTTAAAGACGATGGGATTTACTTGAGAAACAATGCAGCTAATACTGATGAATTGATTCATAAATGGACCTTTACGAGATAA

mRNA sequence

ATGATAAGGGCTGTGGCTGCATTGTTGCTGGTGACAGTGAGTTTGGTCGGGGCTCACCTTGAGGTTGAGTCTGAGAAGATCAATATAAAGCCGCCACTTTCCAGGTATTACATTCATTTCGTTAACGATCTAAGCATCCTCGGTATGATGGTGCACTGCCAGTCGAAGGACGATGATTTGGGAGTTCATCATTTGCTTAATCGGGGAGATAATTACCAATTTAACTTTAGGGTTAACTTTTGGAGAACAACCCTCTTTTGGTGTGATGTGAATAGGCCGGATGCAAACGTCTCTTTTCAATGCTTTTGGCCTGAGAAGAGGAGCACATGGCTTCGTGATAGATGCCGAGATGGAAATGTAGGAACTTGTATCTGGAAGTTTAAAGACGATGGGATTTACTTGAGAAACAATGCAGCTAATACTGATGAATTGATTCATAAATGGACCTTTACGAGATAA

Coding sequence (CDS)

ATGATAAGGGCTGTGGCTGCATTGTTGCTGGTGACAGTGAGTTTGGTCGGGGCTCACCTTGAGGTTGAGTCTGAGAAGATCAATATAAAGCCGCCACTTTCCAGGTATTACATTCATTTCGTTAACGATCTAAGCATCCTCGGTATGATGGTGCACTGCCAGTCGAAGGACGATGATTTGGGAGTTCATCATTTGCTTAATCGGGGAGATAATTACCAATTTAACTTTAGGGTTAACTTTTGGAGAACAACCCTCTTTTGGTGTGATGTGAATAGGCCGGATGCAAACGTCTCTTTTCAATGCTTTTGGCCTGAGAAGAGGAGCACATGGCTTCGTGATAGATGCCGAGATGGAAATGTAGGAACTTGTATCTGGAAGTTTAAAGACGATGGGATTTACTTGAGAAACAATGCAGCTAATACTGATGAATTGATTCATAAATGGACCTTTACGAGATAA

Protein sequence

MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTDELIHKWTFTR

Homology

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BLAST of CmaCh17G012300 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-15
Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 29  IKPPLSRYYIHFVNDLSI-LGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFW 88
           I P +S + +  VN L+    + +HC+SK+DDLG  +L  R + + +NF  N   +T FW
Sbjct: 34  IVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLHSTFFW 93

Query: 89  CDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTDELIHK 148
           C +N+ + +++   FW +     L  RC   N   CIW  K DG+YL N+A+  D L  K
Sbjct: 94  CYMNKDNGHMNVNVFWDD---VILFHRCGWKN---CIWTAKTDGLYLWNSASGEDVLSRK 147

[Close]

BLAST of CmaCh17G012300 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.3e-14
Identity = 41/121 (33.88%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 29  IKPPLSRYYIHFVNDLSI-LGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFW 88
           + P +S + +   N L+    + +HC+SK++DLG  + L   D + +NF  N   +TLFW
Sbjct: 34  VVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDIN-LKFLDRFSWNFGENMLHSTLFW 93

Query: 89  CDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTDELIHK 148
           C +++ D +++ + FW +     L  RC   N   C+W  K+DG+YL N+A   D L  K
Sbjct: 94  CYMSKDDGHMNVKVFWDD---VILFHRCDWKN---CVWTAKNDGLYLWNSAIGEDVLSEK 147

[Close]

BLAST of CmaCh17G012300 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-13
Identity = 47/142 (33.10%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 8   LLLVTVSLVGAH-LEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLL 67
           + +V +SL+G   L+ + +   +K PL+R  I+  ND  +LG  VHC+S+DDD G  H+L
Sbjct: 5   IFIVLISLIGCETLQHDGKVFPMKGPLTRVVIYNDNDY-LLG--VHCKSRDDDHG-FHIL 64

Query: 68  NRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWK 127
            +G  Y + F VNF  +TL++C  ++          +   R +    RCR+     C W+
Sbjct: 65  QKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKAVRDS---SRCRN-----CTWE 124

Query: 128 FKDDGIYLRNNAANTDELIHKW 149
            K+DGIY        + L +KW
Sbjct: 125 AKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of CmaCh17G012300 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.4e-11
Identity = 42/126 (33.33%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 23  ESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWR 82
           + E   I+ PL+R  +   ND  +LG  +HC+SKDDDLG  H+   G+ Y + F VNF  
Sbjct: 36  DGEPFPIRGPLTRITVKNNNDY-LLG--IHCKSKDDDLG-FHIHKEGELYGWKFHVNFQN 95

Query: 83  TTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTD 142
           +TL++C  ++   N         +R  +   RCR+     C W  K D +Y  +N   T 
Sbjct: 96  STLYFCGFSQGQDNKGVFDIDRAERDFY---RCRN-----CTWNAKKDSLYGYSNLPQTV 149

Query: 143 ELIHKW 149
               KW
Sbjct: 156 TWFFKW 149

[Close]

BLAST of CmaCh17G012300 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.1e-10
Identity = 35/118 (29.66%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 32  PLSRYYIHFVNDL-SILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDV 91
           P S+  +   NDL + L ++ HC+SKDDDLG +  L  G+++ F+F   F+  TL++C  
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLG-NRTLQPGESWSFSFGRQFFGRTLYFCSF 103

Query: 92  NRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTDELIHKW 149
           + P+ + SF   + + R +   ++C       C+WK + +G    N+     +L + W
Sbjct: 104 SWPNESHSFD-IYKDHRDSGGDNKCESDR---CVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of CmaCh17G012300 vs. ExPASy TrEMBL
Match: A0A6J1GPJ8 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456305 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.3e-84
Identity = 146/152 (96.05%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAALLLVTVSLVGAHLEVE EKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL
Sbjct: 1   MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           GVHHLLNRGDNYQFNFRVNFWRTTLFWCDV+RPDA+VSFQCFWPEKRSTWLRDRCRDGNV
Sbjct: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHVSFQCFWPEKRSTWLRDRCRDGNV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           GTCIWKFKDDG+YLRNNAANTDEL+HKWTFTR
Sbjct: 121 GTCIWKFKDDGVYLRNNAANTDELVHKWTFTR 152

[Close]

BLAST of CmaCh17G012300 vs. ExPASy TrEMBL
Match: A0A6J1JX75 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111488296 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.4e-63
Identity = 111/152 (73.03%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAALLLVTV LVGA  EVES+KINI+P +S+YYIH +NDLSI  M VHC+S DDDL
Sbjct: 1   MIRNVAALLLVTVGLVGAQPEVESQKINIQPLISKYYIHLINDLSIPDMTVHCKSDDDDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           G+HH L +G++YQFNF++NFW+TTLFWC V+RP+  +SF+CFWPE++S+WLRDRCRDG+V
Sbjct: 61  GIHH-LQKGEDYQFNFKLNFWKTTLFWCRVDRPNKYISFECFWPERKSSWLRDRCRDGDV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           GTCIWK KDDGIYLR NAANT+ELIHKW  TR
Sbjct: 121 GTCIWKIKDDGIYLRFNAANTEELIHKWIITR 151

[Close]

BLAST of CmaCh17G012300 vs. ExPASy TrEMBL
Match: A0A6J1GPD2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456304 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.6e-60
Identity = 104/152 (68.42%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAALLLVTV LVGA  EV+S+KINI+P +S+YY+H +NDLS   M VHC+S DDDL
Sbjct: 1   MIRYVAALLLVTVGLVGAQPEVQSKKINIRPLISKYYVHLINDLSSPDMTVHCKSGDDDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           G HH L++G+++QF+F++NFW+TTLFWC V +P+A +SFQCFWPE++S+WLRDRC+DG+V
Sbjct: 61  GFHH-LHKGEDFQFHFKINFWKTTLFWCTVEKPNAYISFQCFWPERKSSWLRDRCKDGDV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           G+CIW+ KDDGIYLR NAANT+ELIHKW  TR
Sbjct: 121 GSCIWRIKDDGIYLRFNAANTEELIHKWIITR 151

[Close]

BLAST of CmaCh17G012300 vs. ExPASy TrEMBL
Match: A0A6J1GPL8 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456306 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.7e-60
Identity = 105/152 (69.08%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAAL L+TVSLVGA LEVE EKI ++P ++RY IH VNDL + G+MVHC+S+DDDL
Sbjct: 1   MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           GVH++ +RGD+Y F F+VN W TTLFWC V + +A VSF+CFW E R  WLRDRC+DGNV
Sbjct: 61  GVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           GTCIWK KDDGIYLRNNAANT+EL+H W  TR
Sbjct: 121 GTCIWKVKDDGIYLRNNAANTEELVHTWIITR 152

[Close]

BLAST of CmaCh17G012300 vs. ExPASy TrEMBL
Match: A0A6J1JTV9 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111488298 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.3e-59
Identity = 105/152 (69.08%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAALLLVTVS VGA L+VESEK+ +KP +  Y IH VNDL +LG+MVHC+S+DDDL
Sbjct: 1   MIRNVAALLLVTVSFVGAQLDVESEKLKLKPQIFSYTIHLVNDLKVLGIMVHCKSRDDDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           GVH+L +RGD+Y F F+VN W++TLFWC V + +A +SF+CFW E   TWLRDRC+DG V
Sbjct: 61  GVHYLSHRGDDYHFGFKVNVWQSTLFWCKVEKQNAYISFECFWTEIHHTWLRDRCQDGYV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           GTCIWK KDDGIYLRNNAANT+ELIH W  TR
Sbjct: 121 GTCIWKVKDDGIYLRNNAANTEELIHTWIITR 152

[Close]

BLAST of CmaCh17G012300 vs. NCBI nr
Match: XP_023549413.1 (S-protein homolog 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.6 bits (828), Expect = 9.4e-85
Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLS+LGMMVHCQSKDDDL
Sbjct: 1   MIRIVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSVLGMMVHCQSKDDDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           GV+HLLNRGDNYQFNFRVNFWRTTLFWCDV+RPDANVSFQCFWPEKRSTWLRDRCRDGNV
Sbjct: 61  GVYHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           GTCIWKFKDDG+YLRNNAANTDEL+HKWTFTR
Sbjct: 121 GTCIWKFKDDGVYLRNNAANTDELVHKWTFTR 152

[Close]

BLAST of CmaCh17G012300 vs. NCBI nr
Match: XP_022953902.1 (S-protein homolog 6-like [Cucurbita moschata])

HSP 1 Score: 322.0 bits (824), Expect = 2.7e-84
Identity = 146/152 (96.05%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAALLLVTVSLVGAHLEVE EKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL
Sbjct: 1   MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           GVHHLLNRGDNYQFNFRVNFWRTTLFWCDV+RPDA+VSFQCFWPEKRSTWLRDRCRDGNV
Sbjct: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHVSFQCFWPEKRSTWLRDRCRDGNV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           GTCIWKFKDDG+YLRNNAANTDEL+HKWTFTR
Sbjct: 121 GTCIWKFKDDGVYLRNNAANTDELVHKWTFTR 152

[Close]

BLAST of CmaCh17G012300 vs. NCBI nr
Match: XP_022991763.1 (S-protein homolog 5-like [Cucurbita maxima])

HSP 1 Score: 250.0 bits (637), Expect = 1.3e-62
Identity = 111/152 (73.03%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAALLLVTV LVGA  EVES+KINI+P +S+YYIH +NDLSI  M VHC+S DDDL
Sbjct: 1   MIRNVAALLLVTVGLVGAQPEVESQKINIQPLISKYYIHLINDLSIPDMTVHCKSDDDDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           G+HH L +G++YQFNF++NFW+TTLFWC V+RP+  +SF+CFWPE++S+WLRDRCRDG+V
Sbjct: 61  GIHH-LQKGEDYQFNFKLNFWKTTLFWCRVDRPNKYISFECFWPERKSSWLRDRCRDGDV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           GTCIWK KDDGIYLR NAANT+ELIHKW  TR
Sbjct: 121 GTCIWKIKDDGIYLRFNAANTEELIHKWIITR 151

[Close]

BLAST of CmaCh17G012300 vs. NCBI nr
Match: XP_023549415.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.0 bits (624), Expect = 4.3e-61
Identity = 108/152 (71.05%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAALLL+TV LV A  EVESEKIN++PP+S+YYIH +NDLSI  M VHC+S DDDL
Sbjct: 1   MIRNVAALLLMTVCLVRAQPEVESEKINVQPPISKYYIHLINDLSISDMTVHCKSADDDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           G+HH L++G++YQFNF++N W+TTLFWC V  P+  +SF+CFW E +STWLRDRCRDGNV
Sbjct: 61  GIHH-LHKGEDYQFNFKINLWKTTLFWCKVEMPNRYISFECFWAETKSTWLRDRCRDGNV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           GTCIWK K+DGIYLRNNAANT+ELIH W  TR
Sbjct: 121 GTCIWKAKEDGIYLRNNAANTEELIHTWIITR 151

[Close]

BLAST of CmaCh17G012300 vs. NCBI nr
Match: XP_023548645.1 (S-protein homolog 74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.0 bits (624), Expect = 4.3e-61
Identity = 107/152 (70.39%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MIRAVAALLLVTVSLVGAHLEVESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDL 60
           MIR VAALLLVTV LVGA  EVES+KINI+P +S+YY+H +NDLS   M VHC+S D+DL
Sbjct: 1   MIRNVAALLLVTVGLVGAQPEVESKKINIRPLISKYYVHLINDLSSPDMTVHCKSADNDL 60

Query: 61  GVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNV 120
           G HH L++G+++QFNF++NFW+TTLFWC V RP+A VSF+CFWPE++S+WLRDRC++G+V
Sbjct: 61  GFHH-LHKGEDFQFNFKINFWKTTLFWCTVQRPNAYVSFECFWPERKSSWLRDRCKNGDV 120

Query: 121 GTCIWKFKDDGIYLRNNAANTDELIHKWTFTR 153
           G+CIW+ KDDGIYLRNNAANTDELIHKW  TR
Sbjct: 121 GSCIWRIKDDGIYLRNNAANTDELIHKWIITR 151

[Close]

BLAST of CmaCh17G012300 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 29  IKPPLSRYYIHFVNDLSI-LGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFW 88
           I P +S + +  VN L+    + +HC+SK+DDLG  +L  R + + +NF  N   +T FW
Sbjct: 34  IVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLHSTFFW 93

Query: 89  CDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTDELIHK 148
           C +N+ + +++   FW +     L  RC   N   CIW  K DG+YL N+A+  D L  K
Sbjct: 94  CYMNKDNGHMNVNVFWDD---VILFHRCGWKN---CIWTAKTDGLYLWNSASGEDVLSRK 147

[Close]

BLAST of CmaCh17G012300 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-15
Identity = 41/121 (33.88%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 29  IKPPLSRYYIHFVNDLSI-LGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFW 88
           + P +S + +   N L+    + +HC+SK++DLG  + L   D + +NF  N   +TLFW
Sbjct: 34  VVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDIN-LKFLDRFSWNFGENMLHSTLFW 93

Query: 89  CDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTDELIHK 148
           C +++ D +++ + FW +     L  RC   N   C+W  K+DG+YL N+A   D L  K
Sbjct: 94  CYMSKDDGHMNVKVFWDD---VILFHRCDWKN---CVWTAKNDGLYLWNSAIGEDVLSEK 147

[Close]

BLAST of CmaCh17G012300 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 68.2 bits (165), Expect = 6.6e-12
Identity = 42/126 (33.33%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 23  ESEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWR 82
           + E   I+ PL+R  +   ND  +LG  +HC+SKDDDLG  H+   G+ Y + F VNF  
Sbjct: 36  DGEPFPIRGPLTRITVKNNNDY-LLG--IHCKSKDDDLG-FHIHKEGELYGWKFHVNFQN 95

Query: 83  TTLFWCDVNRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTD 142
           +TL++C  ++   N         +R  +   RCR+     C W  K D +Y  +N   T 
Sbjct: 96  STLYFCGFSQGQDNKGVFDIDRAERDFY---RCRN-----CTWNAKKDSLYGYSNLPQTV 149

Query: 143 ELIHKW 149
               KW
Sbjct: 156 TWFFKW 149

[Close]

BLAST of CmaCh17G012300 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11
Identity = 35/118 (29.66%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 32  PLSRYYIHFVNDL-SILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDV 91
           P S+  +   NDL + L ++ HC+SKDDDLG +  L  G+++ F+F   F+  TL++C  
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLG-NRTLQPGESWSFSFGRQFFGRTLYFCSF 103

Query: 92  NRPDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTDELIHKW 149
           + P+ + SF   + + R +   ++C       C+WK + +G    N+     +L + W
Sbjct: 104 SWPNESHSFD-IYKDHRDSGGDNKCESDR---CVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of CmaCh17G012300 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10
Identity = 40/116 (34.48%), Postives = 53/116 (45.69%), Query Frame = 0


Query: 38  IHFVNDL----SILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVNR- 97
           +H  NDL        + V C+S   D+G H+ +  G  YQF+ R NFW+TTLFWC     
Sbjct: 26  LHIWNDLDPNQKHSDLFVQCKSGKADMGKHY-VKYGKIYQFDIRDNFWKTTLFWCTFRHG 85

Query: 98  PDANVSFQCFWPEKRSTWLRDRCRDGNVGTCIWKFKDDGIYLRNNAANTDELIHKW 149
           PD     Q    E +    +        GT  W  ++DGIY R N   T   +H W
Sbjct: 86  PDYRTGQQFDVYEYKPGVAQG-------GTYEWTAREDGIYFRLN-QGTIHKVHNW 132

The following BLAST results are available for this feature:

BLAST of CmaCh17G012300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	4.8e-15	36.36	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	5.3e-14	33.88	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F2Q9V4	3.4e-13	33.10	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q9FI84	9.4e-11	33.33	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
F4JLQ5	6.1e-10	29.66	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of CmaCh17G012300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPJ8	1.3e-84	96.05	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456305 PE=3 SV=1	[more]
A0A6J1JX75	6.4e-63	73.03	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111488296 PE=3 SV=1	[more]
A0A6J1GPD2	6.6e-60	68.42	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456304 PE=3 SV=1	[more]
A0A6J1GPL8	8.7e-60	69.08	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456306 PE=3 SV=1	[more]
A0A6J1JTV9	4.3e-59	69.08	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111488298 PE=3 SV=1	[more]

BLAST of CmaCh17G012300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549413.1	9.4e-85	96.05	S-protein homolog 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953902.1	2.7e-84	96.05	S-protein homolog 6-like [Cucurbita moschata]	[more]
XP_022991763.1	1.3e-62	73.03	S-protein homolog 5-like [Cucurbita maxima]	[more]
XP_023549415.1	4.3e-61	71.05	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023548645.1	4.3e-61	70.39	S-protein homolog 74-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G012300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	3.4e-16	36.36	S-protein homologue 1	[more]
AT4G29035.1	3.8e-15	33.88	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	6.6e-12	33.33	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	4.3e-11	29.66	Plant self-incompatibility protein S1 family	[more]
AT1G28305.1	2.1e-10	34.48	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 38..148 e-value: 3.4E-21 score: 75.7
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 29..150
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 29..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G012300.1	CmaCh17G012300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region