CmaCh17G012140 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G012140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein OSB2, chloroplastic-like
Location	Cma_Chr17: 8385674 .. 8391369 (-)
RNA-Seq Expression	CmaCh17G012140
Synteny	CmaCh17G012140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGCACACAAAGGAACACAGTCGAAGATAAGAGGGAAATCGAGAGCGATGATAATGGCGGTAGAGAAAACCCTAACTCTTTCGTCGTCATTTTTATCAAAGAACTGCATCTTCTCCTTCTCTAGAAACAAGTCACGAGTCGCTTCCTTCTCCCATTTTCCCTCGCATCTGAACGCTGCTAAACACAGCCGTTTCGCTACTCGTTTCCTAAAATGCTTGGCTATGGAAAACTACAGCATTTACTCTGTGTCCTACCCCAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCGGTCAGTCTCATCGGGACAGTTGGTACGCCCGTGGAGCTCAAGCACCTACCATCGGGCAAAGATGTCGCGCGGACGCGACTTGCTGTGTGGAAGTCATCTACTGAAACATCTTGGTACTAATCTAATGTTCTTTCCGAAATGGGTTTTTATGGTTACATTTTATAGAATATTGAATGATAATGTGATTTTTATTTTCGGGGGGATGCTTATGAGGATTAAATTATTTTCGAATATGAAGAATAAGCTCTTGTGTAGTTTGGAGTTGAGATGTTAAGAATATGGAAGTTTTAGGACCGTGGTTATAGACTATATTTCTGATTACGGGGGAGTGGCATCCCAAAATTGTTGTCTCAATTTCAGTAGAATTTGGAAACCATACGAATCTTTAAATGAACTTTTGTTTCATATAAATTTTCGGGTTTTACCAAGTTTGGAAGGAACTTATTCAAATGCCTCTATTTGGGCGTTGACAGAGAGGATGTGTGGATTTTGACGCATTCTAAAATTCTTAACAATGGAAGTTTATTGTTGTTATTATGTATTTTGTAATTTTTGGCTCGTTTATTGGATTTTTCTTGTTTGTATAGCTTTTGCTCTGTAGTTTCCATCTTACAAAAGCTTATTTTTCAAATTAAAAAAGTGTTATTTCACTAAATCTATCCTACCATGAAGTCCACTAATCAATTGGCATTTGAAGCAAATATTATCTGTTAAAGCATTCTAGAATGATTTCATTCCAACTGTTGTTAGGATTTGCCCTGTTACCCATCTCAGCTGCCAAGTTGTTAGCTCTTTCACCATGTTTAACTTATTAATCATCCATAATTATTGTAATTTCATTGTTTATGTTCGTAATTTTTAAAAGTTGTTAATGTATGTGGGGTATGAAGTAACGACTATTGGTTGGCCTATGGTCATTGGGACAGGTAAAGAAGAATTGTTGTTCTTGAAGGGACCAAAGTACTCAATCTCCCAACTATTTTAATTTCCTTCTAAATTCAAAATGCCAGCCTCCGCTGAAATTGTTCTTAGAGTGACTCATGTCCATTGGAATTAGCAAGGGGTTGAAGTTTAGGAAACAGTAAATAGGTAGGAAGTATGGATGATGAGACCAAGGATCTTCTAAAAATCTAAATCAAAGAATCCTGACTACCTTTAAATTTCAGGAGGTGATCCACTTTTATATCAAGAAATGAAACCCTAAGCATATTTTGAACAATGGAGACATCATTCTTATAGCTTCCTTACATATCGTCTATGAATAACTTTGCACCAATACCATTTGTTCATTGGCGAAGCTTATCAGTGAGGACACCTCCCACCACGAGAGCTGAGTGCCTGAGCGCATGCCTAGGTGGAACTTTTAAAATTATGACCTTGCACTTTGGGCTCAGATGGCCATCATGCTTCAATGCACTTTAGGAAGATGCACAAGTCTTTTTGGTGAATAAACTTACTACTTTGAGTTTGTATCATCGTGCTAGTTATGTAGGACAAATGTTATTACATTATTAGAAAATTATAGTCATTAGCTAGGGATTTTATTAGAGAAGTAGTCATAAATAAAGTGTGGCTTGAGATAGGTGTATAATTGGGTATTATCTGAGGAGAGAACTAAGCCTCTCTAATGCTTGACAACCCATTGTAGTTCTAATCCATTCATTAGCCTTATCAATATCATATTTTCATTCATTTCCATTTCCTATTTTGTTTCCTATCAAATTGGTGTTAGAGCACCAACCACTAGGGAATATGCCCAACTATTTTCTAGTTATCTCCTAGGGGAACCCTTACTAATGGTTAGTGCTGCTGATTTTTGAGGGAACAGATTCTGATATTTGGGCTTTGATAAATTTATCCAGTCAACCAGACTGAGTTAGACAAGAGATCAAAGTTTTTGCATGTTTGATGTGGTATTAAGTCTGTACCATGGATTGATAGGACTTGTGCAAACTTGGACATTTATCAATTTTTCATTCTAGACTGATTTCTTCCCGTTCAAATTGAGCTTAATAATATGGAAAACTCATGATGTCTCCATCTTGGGGCTGGCTCAATTGCTTTTGAATAGAGAGTTGGATAGCCACTAGTTTCCTATTGAACCTTTAAAATATTGAAATATTAAAAGTTGACACCCACAAGGAGGCATAGTGACCTATAGAAAGATACTCTAATCCAACAAAATTATACTAAGATCATAATTACAAAAGACCTAGTAATTGACACCCACAAGGAGGCATTAAACTTCATCACCACCCAAACATTGTGACACGGTCTCTTTGTCTCTCCAAATATCCTATTATTCTTTCAAGCCAAACGCCCCACAAGATAGCAAAACCCAGCAAATTCTCAAGTCAGACCACTCAAAAGGCAAATCGAACTGATTCACTCCTTTTGACATACCAGAAAGAAGCCTGGTAGTACCCTGGTGTGTTAGTTAGTGGGCTAAATCTTTCAAACACTTTGTTATCCTTCGTCACTCTGCTCTGGCTTAGCATTTCCGATAGCATTTTTGTTAGCCTCCCTTTCAACTTTTGGTTCCTATCAAACTTTTGTTTTCTTTGATGATGAGAAACAAGTTAAATTAAGATAGAGAGGGAAAAGTATGGGAAAAAAAGGCATGACATTGTTGAAAGACTCCCCATTTCTTGCCAGCAAAATCTTCCACAAAGTGCTACTTTCATTTCTTTGCACGGCAGAACTTTAAACTTCAGATTTATAGAGAGATACAACATAACATTTCAATCTTGAACCTCAAATGTAAAGACAATTAGGACTATGACCCAGATCAATATTTTGCTCTTTCAGGATAAATTTAGCATTCTGGGATGAATTGGCACATGTTGCTTCTCAACACATTCAGAAAGGCAACCAGATATATGTATCTGGCCGGATGGTCGCAGATGTAGTTGAAGCTGATGATGGAAAACAGCAAACTTACCATAAGGTTTTCCCGTCCTTGTTCTCATTGTTCCATGGTTTTCTGTTGATTCATGAAGTAGATTCTGATGCTTTCATATCTTTTGCAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAGCAGCCCCTCATTGTGATCAAGACTCTAATTCTGCAATGGAAGGCACGGGATACGGGATATTCTTTAATTTAAGATTATTGGTATGACACTTTGCTTCAGAATCTTATTATTTGATCCTATCAAATTTCTCCGCAGGGAGAAAGCTCGGCAGTGGTGCTGTTGATAATATGGGGGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCCAATCCCGTTAACTGGTGGGACAATAGGAAAAACAAGGTACTTGATTAATTATTCTCTTGCAATTTTCAACATTCAAATGTCTTGTTTTTGGATTTAAATGTTCTTAACATGGACCAAGTCTGGTATTTTGCTTGTGCTTTTATGTATTTTATTACTTCTAATTGTATTTTGCCATATTGATGCATAAAAAAACCTTGAGAACTTACAATGAACTGCATGACATAATAACACATAGTTTTATGTATGTTATTATTTCTATTGCAGAGGGCAGGCCACTTGGATGCTTGCATTTTTTTAGACGAATAAGTTATTTAGGTTTTTTTTGTTAAAAAAAAAGAAACAACAATAATAAAAAGGAAAATGTTCCAGGGATACGAACTCCAAAGGGGAGTGGGAATAAAGAAAGAAAAAAAAAACAAAATCAAGAATTTATAGAAAAAGGAAAAATCAAAAACTTTGAGCCGAACACAAGCAAATAGTGGTTACCCTGCGAACAATATATTTATCTAATAAAACACTCCGCCTTCTTTGGACCAAAAACTTTTAGAGTTTGCAAATCAAGGCTGAAGTGAAGAAGGCTTCACAAACCACCCCTAAAGCAGCCGCAGCTAAAAACAAGGTTAAAACAAACACAGTCGACAGGAACACTGCCAAAAGAATCTTCAATCAGAGCTTTCTGAAAAATTGTTGGATGGATATTTACATACTTTACAGCTACAAATATTCAAATACCAGAAAACTAGGTGCAACCTCACAACTGTGCGTGACAAATAGCTTGAAAATCTATGCAAACAACGTGAGGGCAGCATTTTCAACAGCAAAGGAACCGAGTGTAATTGAGGCTGTAAAGATTTGCTAAAGGCACAAAACAAAAGCAACCAAGTTGAAAACAGAGCAGACTAAAAACAACTTATCATATGCCAAAAAGGCAAAAGCAACAACAAAGGAAGGAGCCAGCACAAGGCATAGAAAAAGCAAGCTTCCACAAGACCAAAGATCCCAAAAAAAAAAAAGCACAGCCACGAAGACGATGAAATCTCTAGGAGTCCATATGCTTGAAAACTTGAACTTCTTAATGTCTGTGATTTCATCTCGTAAACCTCAAGACCACAGACCCTTGGGAGGGAGGAAAAATTATCTCATAATGTGTTCACATGAATGGAGGAGTGGGACTTTGTATCAGAGAAATAATTTAAGAGGGAGGTTGATTTCTTCTAGAGAAATTTTGCATAGAACCCTATCAATATCTTGTTCAGATGAAATTTTATCATTCCCACTGTCAATTGGAAAATTGAAATCCATTTCCTCACTAGTAAGACTCACCATGGATTTGTTGTTTTATTCGAGCACATCCTCCAAACATCGACTTTTTGGTTGGTCCATTTGTTGAAAATATGTCATCCTTTGACAGACCTTTGTCAACTAAGAGGCTGAAATTCCAAAAGAGGGGAACTGGGAGAAGAGTTGAATCTTGAGCCAACAGTCATCAGCAGACTATTTTTTAGTTATCATATCAAAATATTATTATTTATTGTATATATGAAATGGTGGGCCTTAATGCTTGAAAAAGGAAAGAAAAAGGATTACTAGCCTCCCTTTGCAGGCCATTTTAGACATCCTAACCGTCATCTTTTGTTAGTATTTTTAGGTTCCCTTCACTATATGATTCACTTGAATCCTTAAGGAGAGATGAGATTCACTCTTTAATGTTAATACACCCGCATTTTGATTCTGCTTGCAGAAGAACCCAAAATATCCAGATTTTAAACACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGAATAATCCACCTTGGGTGAAGTCCCAGCTTGCACTATTGGACATGAGAATGGGTTCTCTTGATGATCAGGAAGCCAAAATGGCTAACTTTGTAAACAATTTTTGATTTCCCATCTTAATGAACCGACTCTGGATTCCTTTAAATTGTTTCCAACAGGGTATTAACCAAATATATATGGAAAGATTCTCGTGGTTCCTGGCTTGTATGGTTTGTAAATTGATGTGCTACATGTTAGATTGATAGTAATTCAAATTTTTCTTATGGGTCGGTACCTTTCATGATGGTATGTTGAAATATTTGTTTGTGTG

mRNA sequence

CGCGCACACAAAGGAACACAGTCGAAGATAAGAGGGAAATCGAGAGCGATGATAATGGCGGTAGAGAAAACCCTAACTCTTTCGTCGTCATTTTTATCAAAGAACTGCATCTTCTCCTTCTCTAGAAACAAGTCACGAGTCGCTTCCTTCTCCCATTTTCCCTCGCATCTGAACGCTGCTAAACACAGCCGTTTCGCTACTCGTTTCCTAAAATGCTTGGCTATGGAAAACTACAGCATTTACTCTGTGTCCTACCCCAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCGGTCAGTCTCATCGGGACAGTTGGTACGCCCGTGGAGCTCAAGCACCTACCATCGGGCAAAGATGTCGCGCGGACGCGACTTGCTGTGTGGAAGTCATCTACTGAAACATCTTGGATAAATTTAGCATTCTGGGATGAATTGGCACATGTTGCTTCTCAACACATTCAGAAAGGCAACCAGATATATGTATCTGGCCGGATGGTCGCAGATGTAGTTGAAGCTGATGATGGAAAACAGCAAACTTACCATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAGCAGCCCCTCATTGTGATCAAGACTCTAATTCTGCAATGGAAGGGAGAAAGCTCGGCAGTGGTGCTGTTGATAATATGGGGGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCCAATCCCGTTAACTGGTGGGACAATAGGAAAAACAAGAAGAACCCAAAATATCCAGATTTTAAACACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGAATAATCCACCTTGGGTGAAGTCCCAGCTTGCACTATTGGACATGAGAATGGGTTCTCTTGATGATCAGGAAGCCAAAATGGCTAACTTTGTAAACAATTTTTGATTTCCCATCTTAATGAACCGACTCTGGATTCCTTTAAATTGTTTCCAACAGGGTATTAACCAAATATATATGGAAAGATTCTCGTGGTTCCTGGCTTGTATGGTTTGTAAATTGATGTGCTACATGTTAGATTGATAGTAATTCAAATTTTTCTTATGGGTCGGTACCTTTCATGATGGTATGTTGAAATATTTGTTTGTGTG

Coding sequence (CDS)

ATGATAATGGCGGTAGAGAAAACCCTAACTCTTTCGTCGTCATTTTTATCAAAGAACTGCATCTTCTCCTTCTCTAGAAACAAGTCACGAGTCGCTTCCTTCTCCCATTTTCCCTCGCATCTGAACGCTGCTAAACACAGCCGTTTCGCTACTCGTTTCCTAAAATGCTTGGCTATGGAAAACTACAGCATTTACTCTGTGTCCTACCCCAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCGGTCAGTCTCATCGGGACAGTTGGTACGCCCGTGGAGCTCAAGCACCTACCATCGGGCAAAGATGTCGCGCGGACGCGACTTGCTGTGTGGAAGTCATCTACTGAAACATCTTGGATAAATTTAGCATTCTGGGATGAATTGGCACATGTTGCTTCTCAACACATTCAGAAAGGCAACCAGATATATGTATCTGGCCGGATGGTCGCAGATGTAGTTGAAGCTGATGATGGAAAACAGCAAACTTACCATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAGCAGCCCCTCATTGTGATCAAGACTCTAATTCTGCAATGGAAGGGAGAAAGCTCGGCAGTGGTGCTGTTGATAATATGGGGGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCCAATCCCGTTAACTGGTGGGACAATAGGAAAAACAAGAAGAACCCAAAATATCCAGATTTTAAACACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGAATAATCCACCTTGGGTGAAGTCCCAGCTTGCACTATTGGACATGAGAATGGGTTCTCTTGATGATCAGGAAGCCAAAATGGCTAACTTTGTAAACAATTTTTGA

Protein sequence

MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAMENYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTETSWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERSNSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPDFKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF

Homology

[Close]

BLAST of CmaCh17G012140 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-24
Identity = 72/218 (33.03%), Postives = 111/218 (50.92%), Query Frame = 0


Query: 69  YPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWK--SSTETSWINLA 128
           + KP     K  L NSVSL+G V   +++ +    +    T L V    +   +  I+L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 129 FWDELAHVASQHIQKGNQIYVSGRMVADVVEADD---GKQQTYHKVVVQQLNFIERSNSA 188
            WD +A     H++  + I VSGR+ +    + D   G    Y +V V ++N++    +A
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDY-QVKVAEVNYV----AA 161

Query: 189 APHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPDFKH 248
            P    DS  +   +      ++        LWQ FF+NP +WWDNR+NKKNPK PDFKH
Sbjct: 162 PPSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKH 221

Query: 249 KDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAK 282
           KDTGEALW+   + P W+  +L L D +    D+++ +
Sbjct: 222 KDTGEALWL-CSDLPDWITRRLELFDQKNRFYDEEKTR 253

[Close]

BLAST of CmaCh17G012140 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-22
Identity = 69/209 (33.01%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 70  PKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTETS-WINLAFW 129
           P+P+EI ++ E++N V+LIG V  PV+ +    GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIE-RSNSAAPHC 189
            +LA  A++++ K +QI+VSG++  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 DQDSNSAMEG---RKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKN----PKYPD 249
              S+   E    ++      D +     + W     NP  WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 250 FKHKDTGEALWVEGRNNPPWVKSQLALLD 270
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWL--NKAPNWVLPKLEGLE 292

[Close]

BLAST of CmaCh17G012140 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.0e-21
Identity = 70/233 (30.04%), Postives = 117/233 (50.21%), Query Frame = 0


Query: 66  SVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTETS---- 125
           S  +P+P E+P++ +++NS+ LIG V  PV+      GK  A T ++   SS   S    
Sbjct: 56  SEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDS 115

Query: 126 ----WINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTY----------- 185
               WI + F  +LAH A+ +++K ++++++G+++ DV+++     Q +           
Sbjct: 116 SSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSF 175

Query: 186 -HKVVVQQLNFIERSNS---AAPHCDQD------SNSAMEGRKLGSGAVDNMGGSTQELW 245
            H+V+V+ L++IE S +     P  DQ+      S S   GR+ G+            LW
Sbjct: 176 SHQVMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGT-----------NLW 235

Query: 246 QAFFANPVNWWDNRKNKK----NPKYPDFKHKDTGEALWVEGRNNPPWVKSQL 266
                 P  W D R+ K+    NPK+PDFK KD  +ALW+   N P  + S+L
Sbjct: 236 FDLVDKPNEWCDYREMKQNGSVNPKHPDFKKKDGSQALWL--NNAPTEILSEL 275

[Close]

BLAST of CmaCh17G012140 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-18
Identity = 63/201 (31.34%), Postives = 103/201 (51.24%), Query Frame = 0


Query: 72  PSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTETS-WINLAFWDE 131
           P +I +K E+SN ++LIG V  PV+      GK  A T ++    S  ++ WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 132 LAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERSNSAAPHCD-- 191
           LA +A QH++K ++I+VSG++  D    +    Q+  +V+VQ LNF++ + S        
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 192 QDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKN----PKYPDFKHK 251
           +   ++++ +   S  V  +   T   W+    NP  W D+R NK N    P +PDFK K
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250

Query: 252 DTGEALWVEGRNNPPWVKSQL 266
             G +LW+     P W   +L
Sbjct: 251 VGGLSLWLS--TAPDWALLKL 269

[Close]

BLAST of CmaCh17G012140 vs. ExPASy Swiss-Prot
Match: Q8Y2B4 (Single-stranded DNA-binding protein OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=ssb PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-08
Identity = 34/104 (32.69%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 83  NSVSLIGTVGTPVELKHLPSGKDVARTRLAVW-----KSSTE----TSWINLAFWDELAH 142
           N V ++G +G   E +++PSG  V   R+A       K+S E    T W  +AF+  LA 
Sbjct: 5   NKVIIVGNLGADPETRYMPSGDAVTNIRVATTDRYKDKASGEMREATEWHRIAFFGRLAE 64

Query: 143 VASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFI 178
           +A ++++KG+Q+YV GR+     E  DG++Q   ++V +Q+  +
Sbjct: 65  IAGEYLKKGSQVYVEGRLKTRQWE-KDGQKQYSTEIVAEQMQML 107

[Close]

BLAST of CmaCh17G012140 vs. ExPASy TrEMBL
Match: A0A6J1JVR7 (protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 1.9e-164
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME
Sbjct: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60

Query: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120
           NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET
Sbjct: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180

Query: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF
Sbjct: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 289

[Close]

BLAST of CmaCh17G012140 vs. ExPASy TrEMBL
Match: A0A6J1GQ31 (protein OSB2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456464 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 8.8e-154
Identity = 271/289 (93.77%), Postives = 279/289 (96.54%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           MIMAV+KTLTLSSSFLSK+CIFSFSRNKSR+ASFS F SHLNAAKHSRFATRF KCLAME
Sbjct: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120
           NYS YSVSYPKPSEIPWKKELSNSVSLIG VGTPVELK LP+GKDVARTRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQH+QKGNQIYVSGRMVADV EADDGKQQTYHKVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180

Query: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NS APHCDQDSNSAMEG+KLGSGAVDN+GGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           FKHKDTGEALWVEG NNPPWVKSQLALLDMRMGSLD+QEA MANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 289

[Close]

BLAST of CmaCh17G012140 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.2e-132
Identity = 240/290 (82.76%), Postives = 258/290 (88.97%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           M +A+E+TLTLSSSF SKN IFS  RN+ R++SF  F S+LN  KH RFATRF KC AME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYSIYS-VSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTE 120
           NY+ YS V+YPKPSEIPWKKELSNSV+LIGTVG PVELKHLPSGKDVA TRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIER 180
           TSWI+L FWDELAH+ASQH+QKGNQIYVSGR+VAD+VEADDGKQQTY+KVVVQQLNFIER
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 SNSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYP 240
           SNS APH DQDSNS M GRK  SGAVDN   STQELWQAFFANPV+WWDNRKNKKNPKYP
Sbjct: 183 SNSTAPHYDQDSNSIMAGRKPSSGAVDNT-ASTQELWQAFFANPVDWWDNRKNKKNPKYP 242

Query: 241 DFKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           DFKHKDTGEALWVEGR NPPWVKSQLALLDMRM SLDDQE KM NFV+NF
Sbjct: 243 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNF 291

[Close]

BLAST of CmaCh17G012140 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.8e-131
Identity = 239/290 (82.41%), Postives = 258/290 (88.97%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           M +A+E+TLTLSSSF SKN IFS  RN+ R++SF  F S+LN  KH RFATRF KC AME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYSIYS-VSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTE 120
           NY+ YS V+YPKPSEIPWKKELSNSV+LIGTVG PVELKHLPSGKDVA TRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIER 180
           TSWI+L FWDELAH+ASQH+QKGNQIYVSGR+VAD+VEADDGKQQTY+KVVVQQLNFIER
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 SNSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYP 240
           SNS APH DQDSNS M GRK  SGAVDN   STQELWQAFFANPV+WWDNRKNKK+PKYP
Sbjct: 183 SNSTAPHYDQDSNSIMAGRKPSSGAVDNT-ASTQELWQAFFANPVDWWDNRKNKKSPKYP 242

Query: 241 DFKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           DFKHKDTGEALWVEGR NPPWVKSQLALLDMRM SLDDQE KM NFV+NF
Sbjct: 243 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNF 291

[Close]

BLAST of CmaCh17G012140 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.3e-130
Identity = 238/290 (82.07%), Postives = 256/290 (88.28%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           M+MA+E+TL LSSS  SKN IFS  RN+  ++SF  F S+LN  KH RF   F KC AME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 61  NYSIYS-VSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTE 120
           NY+ YS V+YPKPS+IPWKKELSNSV+LIGTVG PVELKHLPSGKDVA TRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 121 TSWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIER 180
           TSWI L FWDELAH+ASQH+QKGNQIYVSGR+VAD+VEADDGKQQTY+KVVVQQLNFIER
Sbjct: 121 TSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180

Query: 181 SNSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYP 240
           SNS APH DQDSNS M GRK GSGAVDN  GSTQELWQAFFANPV+WWDNRKNKKNPKYP
Sbjct: 181 SNSTAPHYDQDSNSIMAGRKPGSGAVDNT-GSTQELWQAFFANPVDWWDNRKNKKNPKYP 240

Query: 241 DFKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           DFKHKDTGEALWVEGR NPPWVKSQLALLDMRMGSLDDQEAKMANFV +F
Sbjct: 241 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSF 289

[Close]

BLAST of CmaCh17G012140 vs. NCBI nr
Match: XP_022991273.1 (protein OSB2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 588.2 bits (1515), Expect = 3.9e-164
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME
Sbjct: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60

Query: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120
           NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET
Sbjct: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180

Query: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF
Sbjct: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 289

[Close]

BLAST of CmaCh17G012140 vs. NCBI nr
Match: XP_022954097.1 (protein OSB2, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 552.7 bits (1423), Expect = 1.8e-153
Identity = 271/289 (93.77%), Postives = 279/289 (96.54%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           MIMAV+KTLTLSSSFLSK+CIFSFSRNKSR+ASFS F SHLNAAKHSRFATRF KCLAME
Sbjct: 1   MIMAVQKTLTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120
           NYS YSVSYPKPSEIPWKKELSNSVSLIG VGTPVELK LP+GKDVARTRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGIVGTPVELKRLPTGKDVARTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQH+QKGNQIYVSGRMVADV EADDGKQQTYHKVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGRMVADVAEADDGKQQTYHKVVVQQLNFIERS 180

Query: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NS APHCDQDSNSAMEG+KLGSGAVDN+GGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPHCDQDSNSAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           FKHKDTGEALWVEG NNPPWVKSQLALLDMRMGSLD+QEA MANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 289

[Close]

BLAST of CmaCh17G012140 vs. NCBI nr
Match: KAG6575942.1 (Protein OSB1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.1 bits (1411), Expect = 4.5e-152
Identity = 269/289 (93.08%), Postives = 279/289 (96.54%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           MIMAVEK LTLSSSFLSK+CIFSFSRNKSR+ASFS F SHLNAAKHSRFATRF KCLAME
Sbjct: 1   MIMAVEKALTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120
           NYS YSVSYPKPSEIPWKKELSNSVSLIGTVG PVELKHLPSGKDVA TRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGTVGAPVELKHLPSGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQH+QKGNQIYVSG+MVA+VVEADDGKQQTY+KVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGQMVANVVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NS APHCDQDSN+AMEG+KLGSGAVDN+GGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPHCDQDSNTAMEGKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           FKHKDTGEALWVEG NNPPWVKSQLALLDMRMGSLD+QEA MANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 289

[Close]

BLAST of CmaCh17G012140 vs. NCBI nr
Match: XP_023549001.1 (protein OSB2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543.9 bits (1400), Expect = 8.4e-151
Identity = 267/289 (92.39%), Postives = 277/289 (95.85%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           MIMAVEKTL LSSSFLSKNCIFSFSRNK R+ASFS   SHLNAAKHSRFATRF KCLAME
Sbjct: 1   MIMAVEKTLILSSSFLSKNCIFSFSRNKLRIASFSPLLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120
           NYS YSVSYPKPSEIPWKKELSNSVSLIGTVG PVELKHLPSGKDVA TRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGTVGAPVELKHLPSGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQH+QKGNQIYVSG+MVA+V+EADDGKQQTY+KVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGQMVANVIEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NS APHCDQDSN+AMEG+KL SGAVDN+GGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPHCDQDSNTAMEGKKLDSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           FKHKDTGEALWVEG NNPPWVKSQLALLDMRMGSLD+QEAKMANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEAKMANFVNNF 289

[Close]

BLAST of CmaCh17G012140 vs. NCBI nr
Match: KAG7014475.1 (Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 518.1 bits (1333), Expect = 5.0e-143
Identity = 259/289 (89.62%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60
           MIMAVEK LTLSSSFLSK+CIFSFSRNKSR+ASFS F SHLNAAKHSRFATRF KCLAME
Sbjct: 1   MIMAVEKALTLSSSFLSKSCIFSFSRNKSRIASFSPFLSHLNAAKHSRFATRFPKCLAME 60

Query: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120
           NYS YSVSYPKPSEIPWKKELSNSVSLIGTVG PVELKHLPSGKDVA TRLAVWKSSTET
Sbjct: 61  NYSTYSVSYPKPSEIPWKKELSNSVSLIGTVGAPVELKHLPSGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180
           SWINLAFWDELAHVASQH+QKGNQIYVSG+MVA+VVEADDGKQQTY+KVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHVQKGNQIYVSGQMVANVVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 NSAAPHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240
           NS APH           +KLGSGAVDN+GGSTQELWQAFFANPVNWWDNRKNKKNPKYPD
Sbjct: 181 NSTAPH----------WKKLGSGAVDNVGGSTQELWQAFFANPVNWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAKMANFVNNF 290
           FKHKDTGEALWVEG NNPPWVKSQLALLDMRMGSLD+QEA MANFVNNF
Sbjct: 241 FKHKDTGEALWVEGWNNPPWVKSQLALLDMRMGSLDNQEANMANFVNNF 279

[Close]

BLAST of CmaCh17G012140 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-25
Identity = 72/218 (33.03%), Postives = 111/218 (50.92%), Query Frame = 0


Query: 69  YPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWK--SSTETSWINLA 128
           + KP     K  L NSVSL+G V   +++ +    +    T L V    +   +  I+L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 129 FWDELAHVASQHIQKGNQIYVSGRMVADVVEADD---GKQQTYHKVVVQQLNFIERSNSA 188
            WD +A     H++  + I VSGR+ +    + D   G    Y +V V ++N++    +A
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDY-QVKVAEVNYV----AA 161

Query: 189 APHCDQDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKNPKYPDFKH 248
            P    DS  +   +      ++        LWQ FF+NP +WWDNR+NKKNPK PDFKH
Sbjct: 162 PPSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKH 221

Query: 249 KDTGEALWVEGRNNPPWVKSQLALLDMRMGSLDDQEAK 282
           KDTGEALW+   + P W+  +L L D +    D+++ +
Sbjct: 222 KDTGEALWL-CSDLPDWITRRLELFDQKNRFYDEEKTR 253

[Close]

BLAST of CmaCh17G012140 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 109.4 bits (272), Expect = 4.9e-24
Identity = 70/209 (33.49%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 70  PKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTETS-WINLAFW 129
           P+P+EI ++ E++N V+LIG V  PV+ +    GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIE-RSNSAAPHC 189
            +LA  A++++ K +QI+VSG++  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 DQDSNSAMEG---RKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKN----PKYPD 249
              S+   E    ++ G    D +     + W     NP  WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPGIAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 250 FKHKDTGEALWVEGRNNPPWVKSQLALLD 270
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWL--NKAPNWVLPKLEGLE 292

[Close]

BLAST of CmaCh17G012140 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-23
Identity = 69/209 (33.01%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 70  PKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTETS-WINLAFW 129
           P+P+EI ++ E++N V+LIG V  PV+ +    GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIE-RSNSAAPHC 189
            +LA  A++++ K +QI+VSG++  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 DQDSNSAMEG---RKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKN----PKYPD 249
              S+   E    ++      D +     + W     NP  WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 250 FKHKDTGEALWVEGRNNPPWVKSQLALLD 270
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWL--NKAPNWVLPKLEGLE 292

[Close]

BLAST of CmaCh17G012140 vs. TAIR 10
Match: AT1G31010.1 (organellar single-stranded DNA binding protein 4 )

HSP 1 Score: 103.2 bits (256), Expect = 3.5e-22
Identity = 70/233 (30.04%), Postives = 117/233 (50.21%), Query Frame = 0


Query: 66  SVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTETS---- 125
           S  +P+P E+P++ +++NS+ LIG V  PV+      GK  A T ++   SS   S    
Sbjct: 56  SEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDS 115

Query: 126 ----WINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTY----------- 185
               WI + F  +LAH A+ +++K ++++++G+++ DV+++     Q +           
Sbjct: 116 SSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSF 175

Query: 186 -HKVVVQQLNFIERSNS---AAPHCDQD------SNSAMEGRKLGSGAVDNMGGSTQELW 245
            H+V+V+ L++IE S +     P  DQ+      S S   GR+ G+            LW
Sbjct: 176 SHQVMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGT-----------NLW 235

Query: 246 QAFFANPVNWWDNRKNKK----NPKYPDFKHKDTGEALWVEGRNNPPWVKSQL 266
                 P  W D R+ K+    NPK+PDFK KD  +ALW+   N P  + S+L
Sbjct: 236 FDLVDKPNEWCDYREMKQNGSVNPKHPDFKKKDGSQALWL--NNAPTEILSEL 275

[Close]

BLAST of CmaCh17G012140 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 95.5 bits (236), Expect = 7.4e-20
Identity = 63/201 (31.34%), Postives = 103/201 (51.24%), Query Frame = 0


Query: 72  PSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTETS-WINLAFWDE 131
           P +I +K E+SN ++LIG V  PV+      GK  A T ++    S  ++ WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 132 LAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERSNSAAPHCD-- 191
           LA +A QH++K ++I+VSG++  D    +    Q+  +V+VQ LNF++ + S        
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 192 QDSNSAMEGRKLGSGAVDNMGGSTQELWQAFFANPVNWWDNRKNKKN----PKYPDFKHK 251
           +   ++++ +   S  V  +   T   W+    NP  W D+R NK N    P +PDFK K
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250

Query: 252 DTGEALWVEGRNNPPWVKSQL 266
             G +LW+     P W   +L
Sbjct: 251 VGGLSLWLS--TAPDWALLKL 269

The following BLAST results are available for this feature:

BLAST of CmaCh17G012140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	1.7e-24	33.03	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GXH3	2.6e-22	33.01	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q9FYJ2	5.0e-21	30.04	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]
Q8GWJ4	1.0e-18	31.34	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q8Y2B4	1.7e-08	32.69	Single-stranded DNA-binding protein OS=Ralstonia solanacearum (strain GMI1000) O...	[more]

BLAST of CmaCh17G012140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVR7	1.9e-164	100.00	protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=...	[more]
A0A6J1GQ31	8.8e-154	93.77	protein OSB2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456464 P...	[more]
A0A1S3BRV3	7.2e-132	82.76	protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV...	[more]
A0A5D3DR47	2.8e-131	82.41	Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P...	[more]
A0A0A0K4W2	2.3e-130	82.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1	[more]

BLAST of CmaCh17G012140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991273.1	3.9e-164	100.00	protein OSB2, chloroplastic-like [Cucurbita maxima]	[more]
XP_022954097.1	1.8e-153	93.77	protein OSB2, chloroplastic-like [Cucurbita moschata]	[more]
KAG6575942.1	4.5e-152	93.08	Protein OSB1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023549001.1	8.4e-151	92.39	protein OSB2, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG7014475.1	5.0e-143	89.62	Protein OSB1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh17G012140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47720.1	1.2e-25	33.03	Primosome PriB/single-strand DNA-binding	[more]
AT4G20010.2	4.9e-24	33.49	plastid transcriptionally active 9	[more]
AT4G20010.1	1.9e-23	33.01	plastid transcriptionally active 9	[more]
AT1G31010.1	3.5e-22	30.04	organellar single-stranded DNA binding protein 4	[more]
AT5G44785.2	7.4e-20	31.34	organellar single-stranded DNA binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 83..176 e-value: 4.8E-19 score: 68.4
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 81..178 score: 22.686615
IPR000424	Primosome PriB/single-strand DNA-binding	CDD	cd04496	SSB_OBF	coord: 85..177 e-value: 4.09638E-22 score: 86.5121
IPR011344	Single-stranded DNA-binding protein	TIGRFAM	TIGR00621	TIGR00621	coord: 83..193 e-value: 1.9E-18 score: 65.3
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 23..284
None	No IPR available	GENE3D	2.40.50.140		coord: 79..186 e-value: 5.2E-23 score: 83.3
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 23..284
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 83..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G012140.1	CmaCh17G012140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding