CmaCh17G011350 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G011350
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr17: 7904164 .. 7905714 (-)
RNA-Seq Expression	CmaCh17G011350
Synteny	CmaCh17G011350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAAAAATTCACATATCTCGCTCTCCAGGTCCTCATTTCTCAAAGCTCCGAACAGTGGCTGCAGCAATGGCTAACAGCTGCTTCTTCGTCTTCGACTCCATCGTCTAATTCCGCTCCTCATTTCCCTCCCGGAGTCGCCCGCCCACGCTGCAGCGATCAACTGTTTCGCTCATTCACATGGCCATCGCTGACCGGAGGAATACTTCCGGCTCCAAACGACGCTCATCTTCGACCTTTCCTTCTTCTTCTTCTGGTAACTTCGACGTCGAGGTATTTTCTAGGCCTAATGCTTCTCGCTGTATCCACTTCATTGTCGTCTTTGTTCCGAGTCTTACTTTCTATTTTTTTCACACGTTTTCGGTATTATAGCTGAGAGGTGTGAGTTAATGTGGTGTAAATTGTCATAAGTTTTGATTTGATTTGGTTATTTCGATTAGATTTGGTTTGATTATTTGAATTAGATTGAGTGAGATTTGATTCTATATAATGTGAAATTTCTCCCTCTGATCATCCTTTCCTAACCAGTGGTATTGGGATTTGGGAGAGCTTTGGCTCCATTCTGATCATCCATTCCTAACAAATGGTATTGGGATTTGGGATAGCTTTGGCTCCATTCTCATCATCCATTCCAAGTGGTATTGGGATTTGGGAGAGCTTGGGCTCCATTCTGATCCTCCATTCCTAACAAGTGGTATTAGAATTTGGGAGAGTTTTGGAAGTCACATTTGTATTTGTTGAATTTGTTGAGTTACATTTAGTGAGAGTCTTTTGTAGTGTGACCGTGAGGTATTCACTTGGTTTATTAGTGATTGGTTGCTACCCGTGGATGTAGGGGAACTTCTTCTCTCTGAACCACGTAAATATCTTGGTGTCTATTTGTGTAATTTCGTTCATTGGTGTTGTGAGTACATTTGTTCTACTTTCGGCGCGTAACACAATGTACTGAAATTAGGTATTCTGTGTTAAGAGACTCCAGACTTGGTTGAACTTGTGGAGTTATATGTGTTCACTGTGTGGATCTCGTTCCATTTTGCTGCAAGAACATGTCATTTAGTCTGAGCTTTCCATTATACGTTGAGCTATTGTAGGCCATATGCTTCTTGTTTAGAATTGCGATTTCATTGGACCGGAAACTAATCATCGTGCGTCGAGACTGAAATATTTGTTGAGCTTTTGGAGTGACATGTTTTTGCAGCGCGTTTTCTCATTTTCGAGTCTTCAAAAATAATCGTATCACAGAGGCTAGAGGATTACTTACAAAAGAACTTACTAGTCACAATAAGGAAACGAATCAATATTATATCCCAAAATTAAACCTCCTATGATAATGTGAGCTTGAGGAAATATTTGGGGGAGGGAATGTTATGCATTATTGATTAAATTGTTTTCAATTTTGAGCCGAAAGAGGTGATCAGATTCTTTTATTTAATTCATGTAGTATGAAGACTCATGCTGCGAATTCAAAATGAAAGCAATGCTCAAAGAAATCTCGGCGGAATGCAGACAACAGCTTATAAATCATTTGGCAGTGCTTTATATTCTTCTGTAA

mRNA sequence

GTAAAAAAATTCACATATCTCGCTCTCCAGGTCCTCATTTCTCAAAGCTCCGAACAGTGGCTGCAGCAATGGCTAACAGCTGCTTCTTCGTCTTCGACTCCATCGTCTAATTCCGCTCCTCATTTCCCTCCCGGAGTCGCCCGCCCACGCTGCAGCGATCAACTGTTTCGCTCATTCACATGGCCATCGCTGACCGGAGGAATACTTCCGGCTCCAAACGACGCTCATCTTCGACCTTTCCTTCTTCTTCTTCTGGTAACTTCGACGTCGAGTATGAAGACTCATGCTGCGAATTCAAAATGAAAGCAATGCTCAAAGAAATCTCGGCGGAATGCAGACAACAGCTTATAAATCATTTGGCAGTGCTTTATATTCTTCTGTAA

Coding sequence (CDS)

ATGGCCATCGCTGACCGGAGGAATACTTCCGGCTCCAAACGACGCTCATCTTCGACCTTTCCTTCTTCTTCTTCTGGTAACTTCGACGTCGAGTATGAAGACTCATGCTGCGAATTCAAAATGAAAGCAATGCTCAAAGAAATCTCGGCGGAATGCAGACAACAGCTTATAAATCATTTGGCAGTGCTTTATATTCTTCTGTAA

Protein sequence

MAIADRRNTSGSKRRSSSTFPSSSSGNFDVEYEDSCCEFKMKAMLKEISAECRQQLINHLAVLYILL

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh17G011350 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G011350 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G011350 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh17G011350 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G011350.1	CmaCh17G011350.1	mRNA