CmaCh17G010750 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGTAGCTGGTCTCAAGTTCTTGATAATGGCTTCTCTGCGTGCAGTTTTCTTGTCACTTTTGGTCATTGTTGCTTCAGCTGGTGGCGATGACAATAATGGTGGTGGGTATTATGATCTTATGACACCCATATTGGCTAAGGAACAAAGGCTTCTCTCTACCATGATTGGCATCCAAGGAATTATCCTATACAAATTTGGCTCGACAATTTCTCCTCTTGAAGGTATCTGATTCATTGTTTGGTTTGAACGAATATAACTAAAGTAACTTAAAGTTCTAACTATTTTAAAATCACTCTCACTCTTAGAATATATGCTCTTAGTGAGATTCCACATCGATTGGAGAGGAGAACGAAACATTGCTTATAAGGGTGTGGAAACCTCTCCCAACTAGATGTGTTTTAAAACCTGGAGGGGAAGCCCAGAAGGGAATACCCAAAGAGGACAATATCTGCTAGCTGTGAACTTGGGCTGTTACAAATGGTATCAGAGCCAGATACCGGCCCCCAAGGGGGTGGATTGTGAGATCCCACATAGGTGTGAAACCTCCGCCTATTATACACATTTTAAAACCTTGAGGAAAAACCTGAAAGAGAAGTCCAAAAAGGACAATATCTATTAGCGGTGGATTTGAGCTGTCACAGACTTAGTTATCGAATGAGATGTACGTAGGAGCTTGAGTTTAATTTTGGGTATGTTTCTTATATAGGAGGTTTGGCAAGAATCACATGTAAAGCAGTGGATGAGTATGGCTATGAGGCAGCTTCTTACACATTTTTAAGTGATTCAAGTGATGCAAATGGCTACTTCTTGGCAACACTATCTCCTTCAGAGGTAGATGACAAGAGGGAGTTAAAGGAATGCAAGGCTTTTCTTGAGCTCTCACCATTAGAGAACTGTCAAGCTCCTTCTGACCTCAACAATGGAGTATCTGGTGCTCTTCTCCATTCCTATAAACTTTTGGTCCATAACAAGATGAAACTCTTCTCTGTCGGGCCTTTCCTTTTCACTTGCCAAAGTTAAAGGGGAGATGGAAGGCATGATAGTTAATGATCCCATACGTTTAAATACTTAGTGTTGAAAGTTTACTCATCTTATGATGGAATGGTGGCTAAGTTTGTAATATGAATTGGGTTTGGAGAGATATTATAACGGCTCAAGTCCACCGCTAGCAGATATTGTCCTTTAAGTTTTCCTTTTCAGGCTTTTCTTCAAAAATTTTAAAACGCGTTTTCAAGGGAGAGGTTTCTACACCCTTGTAAGAAATAATTCGTTCCTGATGGAATCTAACAATCCACCCCTTGGGGACCCAACAAGGCTTTGATATCATTCGTTCCCCCCTCCAACCGATATGTGATCTCACAAT ATGGCCGTAGCTGGTCTCAAGTTCTTGATAATGGCTTCTCTGCGTGCAGTTTTCTTGTCACTTTTGGTCATTGTTGCTTCAGCTGGTGGCGATGACAATAATGGTGGTGGGTATTATGATCTTATGACACCCATATTGGCTAAGGAACAAAGGCTTCTCTCTACCATGATTGGCATCCAAGGAATTATCCTATACAAATTTGGCTCGACAATTTCTCCTCTTGAAGGAGGTTTGGCAAGAATCACATGTAAAGCAGTGGATGAGTATGGCTATGAGGCAGCTTCTTACACATTTTTAAGTGATTCAAGTGATGCAAATGGCTACTTCTTGGCAACACTATCTCCTTCAGAGGTAGATGACAAGAGGGAGTTAAAGGAATGCAAGGCTTTTCTTGAGCTCTCACCATTAGAGAACTGTCAAGCTCCTTCTGACCTCAACAATGGAGTATCTGGTGCTCTTCTCCATTCCTATAAACTTTTGGTCCATAACAAGATGAAACTCTTCTCTGTCGGGCCTTTCCTTTTCACTTGCCAAAGTTAAAGGGGAGATGGAAGGCATGATAGTTAATGATCCCATACGTTTAAATACTTAGTGTTGAAAGTTTACTCATCTTATGATGGAATGGTGGCTAAGTTTGTAATATGAATTGGGTTTGGAGAGATATTATAACGGCTCAAGTCCACCGCTAGCAGATATTGTCCTTTAAGTTTTCCTTTTCAGGCTTTTCTTCAAAAATTTTAAAACGCGTTTTCAAGGGAGAGGTTTCTACACCCTTGTAAGAAATAATTCGTTCCTGATGGAATCTAACAATCCACCCCTTGGGGACCCAACAAGGCTTTGATATCATTCGTTCCCCCCTCCAACCGATATGTGATCTCACAAT ATGGCCGTAGCTGGTCTCAAGTTCTTGATAATGGCTTCTCTGCGTGCAGTTTTCTTGTCACTTTTGGTCATTGTTGCTTCAGCTGGTGGCGATGACAATAATGGTGGTGGGTATTATGATCTTATGACACCCATATTGGCTAAGGAACAAAGGCTTCTCTCTACCATGATTGGCATCCAAGGAATTATCCTATACAAATTTGGCTCGACAATTTCTCCTCTTGAAGGAGGTTTGGCAAGAATCACATGTAAAGCAGTGGATGAGTATGGCTATGAGGCAGCTTCTTACACATTTTTAAGTGATTCAAGTGATGCAAATGGCTACTTCTTGGCAACACTATCTCCTTCAGAGGTAGATGACAAGAGGGAGTTAAAGGAATGCAAGGCTTTTCTTGAGCTCTCACCATTAGAGAACTGTCAAGCTCCTTCTGACCTCAACAATGGAGTATCTGGTGCTCTTCTCCATTCCTATAAACTTTTGGTCCATAACAAGATGAAACTCTTCTCTGTCGGGCCTTTCCTTTTCACTTGCCAAAGTTAA MAVAGLKFLIMASLRAVFLSLLVIVASAGGDDNNGGGYYDLMTPILAKEQRLLSTMIGIQGIILYKFGSTISPLEGGLARITCKAVDEYGYEAASYTFLSDSSDANGYFLATLSPSEVDDKRELKECKAFLELSPLENCQAPSDLNNGVSGALLHSYKLLVHNKMKLFSVGPFLFTCQS Homology
BLAST of CmaCh17G010750 vs. ExPASy Swiss-Prot
Match: O81417 (Protein SEED AND ROOT HAIR PROTECTIVE PROTEIN OS=Arabidopsis thaliana OX=3702 GN=SRPP PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.3e-22 Identity = 51/122 (41.80%), Postives = 73/122 (59.84%), Query Frame = 0
BLAST of CmaCh17G010750 vs. ExPASy Swiss-Prot
Match: Q9LZJ7 (Proline-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=PRP3 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.5e-12 Identity = 40/120 (33.33%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of CmaCh17G010750 vs. ExPASy Swiss-Prot
Match: Q9FZ35 (Proline-rich protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRP1 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11 Identity = 41/121 (33.88%), Postives = 58/121 (47.93%), Query Frame = 0
BLAST of CmaCh17G010750 vs. ExPASy TrEMBL
Match: A0A6J1JSC5 (proline-rich protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111487959 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CmaCh17G010750 vs. ExPASy TrEMBL
Match: A0A6J1GQG7 (proline-rich protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111456171 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 7.0e-85 Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 0
BLAST of CmaCh17G010750 vs. ExPASy TrEMBL
Match: A0A0A0K5H5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398170 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 1.3e-70 Identity = 144/173 (83.24%), Postives = 154/173 (89.02%), Query Frame = 0
BLAST of CmaCh17G010750 vs. ExPASy TrEMBL
Match: A0A5A7VL80 (Proline-rich protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00770 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 9.2e-69 Identity = 142/173 (82.08%), Postives = 152/173 (87.86%), Query Frame = 0
BLAST of CmaCh17G010750 vs. ExPASy TrEMBL
Match: A0A1S3BRS8 (proline-rich protein 3-like OS=Cucumis melo OX=3656 GN=LOC103492798 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.5e-68 Identity = 138/172 (80.23%), Postives = 149/172 (86.63%), Query Frame = 0
BLAST of CmaCh17G010750 vs. NCBI nr
Match: XP_022991245.1 (proline-rich protein 3-like [Cucurbita maxima]) HSP 1 Score: 352.1 bits (902), Expect = 2.9e-93 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CmaCh17G010750 vs. NCBI nr
Match: KAG6575812.1 (Proline-rich protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89 Identity = 173/179 (96.65%), Postives = 174/179 (97.21%), Query Frame = 0
BLAST of CmaCh17G010750 vs. NCBI nr
Match: XP_022953725.1 (proline-rich protein 3-like [Cucurbita moschata]) HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84 Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 0
BLAST of CmaCh17G010750 vs. NCBI nr
Match: XP_023548997.1 (proline-rich protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 320.5 bits (820), Expect = 9.4e-84 Identity = 161/170 (94.71%), Postives = 166/170 (97.65%), Query Frame = 0
BLAST of CmaCh17G010750 vs. NCBI nr
Match: XP_038896334.1 (proline-rich protein 3-like [Benincasa hispida]) HSP 1 Score: 295.4 bits (755), Expect = 3.2e-76 Identity = 146/169 (86.39%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of CmaCh17G010750 vs. TAIR 10
Match: AT2G47540.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 153.7 bits (387), Expect = 1.4e-37 Identity = 74/134 (55.22%), Postives = 103/134 (76.87%), Query Frame = 0
BLAST of CmaCh17G010750 vs. TAIR 10
Match: AT4G02270.1 (root hair specific 13 ) HSP 1 Score: 107.8 bits (268), Expect = 8.9e-24 Identity = 51/122 (41.80%), Postives = 73/122 (59.84%), Query Frame = 0
BLAST of CmaCh17G010750 vs. TAIR 10
Match: AT2G47530.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 78.2 bits (191), Expect = 7.6e-15 Identity = 53/179 (29.61%), Postives = 85/179 (47.49%), Query Frame = 0
BLAST of CmaCh17G010750 vs. TAIR 10
Match: AT3G62680.1 (proline-rich protein 3 ) HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13 Identity = 40/120 (33.33%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of CmaCh17G010750 vs. TAIR 10
Match: AT1G54970.1 (proline-rich protein 1 ) HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12 Identity = 41/121 (33.88%), Postives = 58/121 (47.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|