CmaCh17G009210 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh17G009210
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr17: 6930169 .. 6930579 (+)
RNA-Seq ExpressionCmaCh17G009210
SyntenyCmaCh17G009210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCATAAACGCCATTATGACATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATTGAACAATGACGATCAATACGAGAAGTTTGGCACGAAAGGGTTCGAGAACAACGATCATAAAAGCTTAAAACAACTCATCAATGGGGAAGGGAAAACAGAAATAGGGTCGGACGAGAGGAACCGAGATAGGAACTCGCTCGGGAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGGTAGTGATCAACACCAGCTAATGAAGAAGGCAACTAGAAAAAAGAGTTTCCCCTAA

mRNA sequence

ATGTCTCATAAACGCCATTATGACATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATTGAACAATGACGATCAATACGAGAAGTTTGGCACGAAAGGGTTCGAGAACAACGATCATAAAAGCTTAAAACAACTCATCAATGGGGAAGGGAAAACAGAAATAGGGTCGGACGAGAGGAACCGAGATAGGAACTCGCTCGGGAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGGTAGTGATCAACACCAGCTAATGAAGAAGGCAACTAGAAAAAAGAGTTTCCCCTAA

Coding sequence (CDS)

ATGTCTCATAAACGCCATTATGACATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATTGAACAATGACGATCAATACGAGAAGTTTGGCACGAAAGGGTTCGAGAACAACGATCATAAAAGCTTAAAACAACTCATCAATGGGGAAGGGAAAACAGAAATAGGGTCGGACGAGAGGAACCGAGATAGGAACTCGCTCGGGAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGGTAGTGATCAACACCAGCTAATGAAGAAGGCAACTAGAAAAAAGAGTTTCCCCTAA

Protein sequence

MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEGKTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGSDQHQLMKKATRKKSFP
Homology
BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match: A0A6J1JXP3 (uncharacterized protein LOC111488430 OS=Cucurbita maxima OX=3661 GN=LOC111488430 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.1e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
           MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG
Sbjct: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60

Query: 61  KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
           KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS
Sbjct: 61  KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120

Query: 121 DQHQLMKKATRKKSFP 137
           DQHQLMKKATRKKSFP
Sbjct: 121 DQHQLMKKATRKKSFP 136

BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match: A0A6J1GRB0 (uncharacterized protein LOC111456324 OS=Cucurbita moschata OX=3662 GN=LOC111456324 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.0e-61
Identity = 124/136 (91.18%), Postives = 127/136 (93.38%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
           MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEG
Sbjct: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEG 60

Query: 61  KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
           KTEIGSDERN +RNSLGKHFSEEEIN LQIVKKQHEDGL GVKLKKVVGKFLRNLIKG  
Sbjct: 61  KTEIGSDERNGERNSLGKHFSEEEINSLQIVKKQHEDGLHGVKLKKVVGKFLRNLIKGDG 120

Query: 121 DQHQLMKKATRKKSFP 137
           D+HQLMKKA  KKSFP
Sbjct: 121 DRHQLMKKAIIKKSFP 136

BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match: A0A0A0KBK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 9.2e-45
Identity = 105/138 (76.09%), Postives = 115/138 (83.33%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQ-YEKFGTKGFENNDHKSLKQLINGE 60
           +SHK+HYDISMSKRTRKPAKIQDE+Q    N+DD      G +   NNDHKSLKQLI+GE
Sbjct: 6   ISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQLISGE 65

Query: 61  GKTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGG 120
           GK EI SDE NR+RNSLG+HFS+EEIN LQIVKKQH+DGLQGVKLKKVVGKFLRNLIKGG
Sbjct: 66  GKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG 125

Query: 121 SD--QHQLMKKATRKKSF 136
            D  QHQLMKK  RKKSF
Sbjct: 126 GDHHQHQLMKKPIRKKSF 143

BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match: A0A5A7US55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001280 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.0e-44
Identity = 103/137 (75.18%), Postives = 113/137 (82.48%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDD-QYEKFGTKGFENNDHKSLKQLINGE 60
           +SHK+HYDISMSKRTRKPAKIQDE+Q  T  +D       G +   NNDHKSLKQLI+GE
Sbjct: 6   ISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSESNNDHKSLKQLISGE 65

Query: 61  GKTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGG 120
           GK E   DE NR+RNSLG+HFS+EEIN LQIVKKQH+DGLQGVKLKKVVGKFLRNLIKGG
Sbjct: 66  GKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG 125

Query: 121 SD-QHQLMKKATRKKSF 136
            D QHQLMKK TRKKSF
Sbjct: 126 GDHQHQLMKKPTRKKSF 142

BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match: A0A1S3CFF2 (uncharacterized protein LOC103499874 OS=Cucumis melo OX=3656 GN=LOC103499874 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.0e-44
Identity = 103/137 (75.18%), Postives = 113/137 (82.48%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDD-QYEKFGTKGFENNDHKSLKQLINGE 60
           +SHK+HYDISMSKRTRKPAKIQDE+Q  T  +D       G +   NNDHKSLKQLI+GE
Sbjct: 6   ISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSESNNDHKSLKQLISGE 65

Query: 61  GKTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGG 120
           GK E   DE NR+RNSLG+HFS+EEIN LQIVKKQH+DGLQGVKLKKVVGKFLRNLIKGG
Sbjct: 66  GKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG 125

Query: 121 SD-QHQLMKKATRKKSF 136
            D QHQLMKK TRKKSF
Sbjct: 126 GDHQHQLMKKPTRKKSF 142

BLAST of CmaCh17G009210 vs. NCBI nr
Match: XP_022991938.1 (uncharacterized protein LOC111488430 [Cucurbita maxima])

HSP 1 Score: 269.2 bits (687), Expect = 1.9e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
           MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG
Sbjct: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60

Query: 61  KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
           KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS
Sbjct: 61  KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120

Query: 121 DQHQLMKKATRKKSFP 137
           DQHQLMKKATRKKSFP
Sbjct: 121 DQHQLMKKATRKKSFP 136

BLAST of CmaCh17G009210 vs. NCBI nr
Match: XP_023549383.1 (uncharacterized protein LOC111807744 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.4 bits (633), Expect = 3.4e-62
Identity = 125/136 (91.91%), Postives = 129/136 (94.85%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
           MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTKGFENNDHKSLKQLINGEG
Sbjct: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKGFENNDHKSLKQLINGEG 60

Query: 61  KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
           K EIGSDERN +RNSLGKHFSEEEIN LQIVKKQHEDGLQGVKLKK+VGKFLRNLIKGG 
Sbjct: 61  KAEIGSDERNGERNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKKMVGKFLRNLIKGGG 120

Query: 121 DQHQLMKKATRKKSFP 137
           D+HQLMK A RKKSFP
Sbjct: 121 DRHQLMKMAIRKKSFP 136

BLAST of CmaCh17G009210 vs. NCBI nr
Match: XP_022953919.1 (uncharacterized protein LOC111456324 [Cucurbita moschata])

HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60
Identity = 124/136 (91.18%), Postives = 127/136 (93.38%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
           MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEG
Sbjct: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEG 60

Query: 61  KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
           KTEIGSDERN +RNSLGKHFSEEEIN LQIVKKQHEDGL GVKLKKVVGKFLRNLIKG  
Sbjct: 61  KTEIGSDERNGERNSLGKHFSEEEINSLQIVKKQHEDGLHGVKLKKVVGKFLRNLIKGDG 120

Query: 121 DQHQLMKKATRKKSFP 137
           D+HQLMKKA  KKSFP
Sbjct: 121 DRHQLMKKAIIKKSFP 136

BLAST of CmaCh17G009210 vs. NCBI nr
Match: KAG6575654.1 (hypothetical protein SDJN03_26293, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.7 bits (613), Expect = 7.2e-60
Identity = 125/137 (91.24%), Postives = 128/137 (93.43%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
           MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEG
Sbjct: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEG 60

Query: 61  KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
           KTEIGSDERN +RNSLGKHFSEEEINGLQIVKKQHEDGL GVKLKKVVGKFLRNLIKG  
Sbjct: 61  KTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLHGVKLKKVVGKFLRNLIKGDG 120

Query: 121 DQHQL-MKKATRKKSFP 137
           D+HQL MKKA  KKSFP
Sbjct: 121 DRHQLMMKKAIIKKSFP 137

BLAST of CmaCh17G009210 vs. NCBI nr
Match: KAG7014203.1 (hypothetical protein SDJN02_24378, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.7 bits (561), Expect = 7.7e-54
Identity = 112/118 (94.92%), Postives = 114/118 (96.61%), Query Frame = 0

Query: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
           MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEG
Sbjct: 1   MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEG 60

Query: 61  KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKG 119
           KTEIGSDERN +RNSLGKHFSEEEINGLQIVKKQHEDGL GVKLKKVVGKFLRNLIKG
Sbjct: 61  KTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLHGVKLKKVVGKFLRNLIKG 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JXP39.1e-69100.00uncharacterized protein LOC111488430 OS=Cucurbita maxima OX=3661 GN=LOC111488430... [more]
A0A6J1GRB07.0e-6191.18uncharacterized protein LOC111456324 OS=Cucurbita moschata OX=3662 GN=LOC1114563... [more]
A0A0A0KBK89.2e-4576.09Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1[more]
A0A5A7US552.0e-4475.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CFF22.0e-4475.18uncharacterized protein LOC103499874 OS=Cucumis melo OX=3656 GN=LOC103499874 PE=... [more]
Match NameE-valueIdentityDescription
XP_022991938.11.9e-68100.00uncharacterized protein LOC111488430 [Cucurbita maxima][more]
XP_023549383.13.4e-6291.91uncharacterized protein LOC111807744 [Cucurbita pepo subsp. pepo][more]
XP_022953919.11.4e-6091.18uncharacterized protein LOC111456324 [Cucurbita moschata][more]
KAG6575654.17.2e-6091.24hypothetical protein SDJN03_26293, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7014203.17.7e-5494.92hypothetical protein SDJN02_24378, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G009210.1CmaCh17G009210.1mRNA