Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCATAAACGCCATTATGACATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATTGAACAATGACGATCAATACGAGAAGTTTGGCACGAAAGGGTTCGAGAACAACGATCATAAAAGCTTAAAACAACTCATCAATGGGGAAGGGAAAACAGAAATAGGGTCGGACGAGAGGAACCGAGATAGGAACTCGCTCGGGAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGGTAGTGATCAACACCAGCTAATGAAGAAGGCAACTAGAAAAAAGAGTTTCCCCTAA
mRNA sequence
ATGTCTCATAAACGCCATTATGACATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATTGAACAATGACGATCAATACGAGAAGTTTGGCACGAAAGGGTTCGAGAACAACGATCATAAAAGCTTAAAACAACTCATCAATGGGGAAGGGAAAACAGAAATAGGGTCGGACGAGAGGAACCGAGATAGGAACTCGCTCGGGAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGGTAGTGATCAACACCAGCTAATGAAGAAGGCAACTAGAAAAAAGAGTTTCCCCTAA
Coding sequence (CDS)
ATGTCTCATAAACGCCATTATGACATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATTGAACAATGACGATCAATACGAGAAGTTTGGCACGAAAGGGTTCGAGAACAACGATCATAAAAGCTTAAAACAACTCATCAATGGGGAAGGGAAAACAGAAATAGGGTCGGACGAGAGGAACCGAGATAGGAACTCGCTCGGGAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACAAGGAGTGAAGCTGAAAAAAGTGGTCGGAAAATTTTTGAGAAATTTGATCAAAGGTGGTAGTGATCAACACCAGCTAATGAAGAAGGCAACTAGAAAAAAGAGTTTCCCCTAA
Protein sequence
MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEGKTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGSDQHQLMKKATRKKSFP
Homology
BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match:
A0A6J1JXP3 (uncharacterized protein LOC111488430 OS=Cucurbita maxima OX=3661 GN=LOC111488430 PE=4 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 9.1e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG
Sbjct: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
Query: 61 KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS
Sbjct: 61 KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
Query: 121 DQHQLMKKATRKKSFP 137
DQHQLMKKATRKKSFP
Sbjct: 121 DQHQLMKKATRKKSFP 136
BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match:
A0A6J1GRB0 (uncharacterized protein LOC111456324 OS=Cucurbita moschata OX=3662 GN=LOC111456324 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 7.0e-61
Identity = 124/136 (91.18%), Postives = 127/136 (93.38%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEG
Sbjct: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEG 60
Query: 61 KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
KTEIGSDERN +RNSLGKHFSEEEIN LQIVKKQHEDGL GVKLKKVVGKFLRNLIKG
Sbjct: 61 KTEIGSDERNGERNSLGKHFSEEEINSLQIVKKQHEDGLHGVKLKKVVGKFLRNLIKGDG 120
Query: 121 DQHQLMKKATRKKSFP 137
D+HQLMKKA KKSFP
Sbjct: 121 DRHQLMKKAIIKKSFP 136
BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match:
A0A0A0KBK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1)
HSP 1 Score: 189.5 bits (480), Expect = 9.2e-45
Identity = 105/138 (76.09%), Postives = 115/138 (83.33%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQ-YEKFGTKGFENNDHKSLKQLINGE 60
+SHK+HYDISMSKRTRKPAKIQDE+Q N+DD G + NNDHKSLKQLI+GE
Sbjct: 6 ISHKQHYDISMSKRTRKPAKIQDELQILPTNDDDLIIIGKGDQSEINNDHKSLKQLISGE 65
Query: 61 GKTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGG 120
GK EI SDE NR+RNSLG+HFS+EEIN LQIVKKQH+DGLQGVKLKKVVGKFLRNLIKGG
Sbjct: 66 GKAEIRSDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG 125
Query: 121 SD--QHQLMKKATRKKSF 136
D QHQLMKK RKKSF
Sbjct: 126 GDHHQHQLMKKPIRKKSF 143
BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match:
A0A5A7US55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001280 PE=4 SV=1)
HSP 1 Score: 188.3 bits (477), Expect = 2.0e-44
Identity = 103/137 (75.18%), Postives = 113/137 (82.48%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDD-QYEKFGTKGFENNDHKSLKQLINGE 60
+SHK+HYDISMSKRTRKPAKIQDE+Q T +D G + NNDHKSLKQLI+GE
Sbjct: 6 ISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSESNNDHKSLKQLISGE 65
Query: 61 GKTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGG 120
GK E DE NR+RNSLG+HFS+EEIN LQIVKKQH+DGLQGVKLKKVVGKFLRNLIKGG
Sbjct: 66 GKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG 125
Query: 121 SD-QHQLMKKATRKKSF 136
D QHQLMKK TRKKSF
Sbjct: 126 GDHQHQLMKKPTRKKSF 142
BLAST of CmaCh17G009210 vs. ExPASy TrEMBL
Match:
A0A1S3CFF2 (uncharacterized protein LOC103499874 OS=Cucumis melo OX=3656 GN=LOC103499874 PE=4 SV=1)
HSP 1 Score: 188.3 bits (477), Expect = 2.0e-44
Identity = 103/137 (75.18%), Postives = 113/137 (82.48%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDD-QYEKFGTKGFENNDHKSLKQLINGE 60
+SHK+HYDISMSKRTRKPAKIQDE+Q T +D G + NNDHKSLKQLI+GE
Sbjct: 6 ISHKQHYDISMSKRTRKPAKIQDELQNFTSKDDGLSIIDKGDRSESNNDHKSLKQLISGE 65
Query: 61 GKTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGG 120
GK E DE NR+RNSLG+HFS+EEIN LQIVKKQH+DGLQGVKLKKVVGKFLRNLIKGG
Sbjct: 66 GKAETRLDEGNRERNSLGQHFSKEEINNLQIVKKQHQDGLQGVKLKKVVGKFLRNLIKGG 125
Query: 121 SD-QHQLMKKATRKKSF 136
D QHQLMKK TRKKSF
Sbjct: 126 GDHQHQLMKKPTRKKSF 142
BLAST of CmaCh17G009210 vs. NCBI nr
Match:
XP_022991938.1 (uncharacterized protein LOC111488430 [Cucurbita maxima])
HSP 1 Score: 269.2 bits (687), Expect = 1.9e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG
Sbjct: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
Query: 61 KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS
Sbjct: 61 KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
Query: 121 DQHQLMKKATRKKSFP 137
DQHQLMKKATRKKSFP
Sbjct: 121 DQHQLMKKATRKKSFP 136
BLAST of CmaCh17G009210 vs. NCBI nr
Match:
XP_023549383.1 (uncharacterized protein LOC111807744 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 248.4 bits (633), Expect = 3.4e-62
Identity = 125/136 (91.91%), Postives = 129/136 (94.85%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTKGFENNDHKSLKQLINGEG
Sbjct: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKGFENNDHKSLKQLINGEG 60
Query: 61 KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
K EIGSDERN +RNSLGKHFSEEEIN LQIVKKQHEDGLQGVKLKK+VGKFLRNLIKGG
Sbjct: 61 KAEIGSDERNGERNSLGKHFSEEEINALQIVKKQHEDGLQGVKLKKMVGKFLRNLIKGGG 120
Query: 121 DQHQLMKKATRKKSFP 137
D+HQLMK A RKKSFP
Sbjct: 121 DRHQLMKMAIRKKSFP 136
BLAST of CmaCh17G009210 vs. NCBI nr
Match:
XP_022953919.1 (uncharacterized protein LOC111456324 [Cucurbita moschata])
HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60
Identity = 124/136 (91.18%), Postives = 127/136 (93.38%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEG
Sbjct: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEG 60
Query: 61 KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
KTEIGSDERN +RNSLGKHFSEEEIN LQIVKKQHEDGL GVKLKKVVGKFLRNLIKG
Sbjct: 61 KTEIGSDERNGERNSLGKHFSEEEINSLQIVKKQHEDGLHGVKLKKVVGKFLRNLIKGDG 120
Query: 121 DQHQLMKKATRKKSFP 137
D+HQLMKKA KKSFP
Sbjct: 121 DRHQLMKKAIIKKSFP 136
BLAST of CmaCh17G009210 vs. NCBI nr
Match:
KAG6575654.1 (hypothetical protein SDJN03_26293, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 240.7 bits (613), Expect = 7.2e-60
Identity = 125/137 (91.24%), Postives = 128/137 (93.43%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEG
Sbjct: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEG 60
Query: 61 KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKGGS 120
KTEIGSDERN +RNSLGKHFSEEEINGLQIVKKQHEDGL GVKLKKVVGKFLRNLIKG
Sbjct: 61 KTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLHGVKLKKVVGKFLRNLIKGDG 120
Query: 121 DQHQL-MKKATRKKSFP 137
D+HQL MKKA KKSFP
Sbjct: 121 DRHQLMMKKAIIKKSFP 137
BLAST of CmaCh17G009210 vs. NCBI nr
Match:
KAG7014203.1 (hypothetical protein SDJN02_24378, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 220.7 bits (561), Expect = 7.7e-54
Identity = 112/118 (94.92%), Postives = 114/118 (96.61%), Query Frame = 0
Query: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTLNNDDQYEKFGTKGFENNDHKSLKQLINGEG 60
MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEG
Sbjct: 1 MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEG 60
Query: 61 KTEIGSDERNRDRNSLGKHFSEEEINGLQIVKKQHEDGLQGVKLKKVVGKFLRNLIKG 119
KTEIGSDERN +RNSLGKHFSEEEINGLQIVKKQHEDGL GVKLKKVVGKFLRNLIKG
Sbjct: 61 KTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLHGVKLKKVVGKFLRNLIKG 118
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JXP3 | 9.1e-69 | 100.00 | uncharacterized protein LOC111488430 OS=Cucurbita maxima OX=3661 GN=LOC111488430... | [more] |
A0A6J1GRB0 | 7.0e-61 | 91.18 | uncharacterized protein LOC111456324 OS=Cucurbita moschata OX=3662 GN=LOC1114563... | [more] |
A0A0A0KBK8 | 9.2e-45 | 76.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430160 PE=4 SV=1 | [more] |
A0A5A7US55 | 2.0e-44 | 75.18 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CFF2 | 2.0e-44 | 75.18 | uncharacterized protein LOC103499874 OS=Cucumis melo OX=3656 GN=LOC103499874 PE=... | [more] |
Match Name | E-value | Identity | Description | |
XP_022991938.1 | 1.9e-68 | 100.00 | uncharacterized protein LOC111488430 [Cucurbita maxima] | [more] |
XP_023549383.1 | 3.4e-62 | 91.91 | uncharacterized protein LOC111807744 [Cucurbita pepo subsp. pepo] | [more] |
XP_022953919.1 | 1.4e-60 | 91.18 | uncharacterized protein LOC111456324 [Cucurbita moschata] | [more] |
KAG6575654.1 | 7.2e-60 | 91.24 | hypothetical protein SDJN03_26293, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7014203.1 | 7.7e-54 | 94.92 | hypothetical protein SDJN02_24378, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |