CmaCh17G008860 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAGCCCCCCCCCCCTCCCTCTCTCTCTCTCTTCATCGCCGCCGCTATTTCCACCATGTCCGACGAGGAATGGGTCAACGTTGCCCTCTCCGATGACTCTCTTGTCGTCGACTTACTTCTTCGTCTCAACCGCCCTCCCCCTCTGAATCCTCTCTTTCCCCCTCTCCGACTTGACTGGTCTGTCCGCCAGCCTCGTTCCAAGTCCATTCTTACCCGCCATGCCTCCGATTCTGCCGGAAAGAACTTTGATGCCGCCGCAAGAGCTAGTCCGACCACTCCTCTCACTTGGAGCAGCGGCGGCTGTGGTGGTGGCGCTACCTCCATCAGCGGCGGATTCGTCGACGCATCCGACGCCGCAAGATCTAAGGTTCTGTTCGTTTCGGTTTTTGTTTCGTTTGATGTTCTTCTTCTTCTCCTTCTTCTTCTTCTCTTTTTCTGAAAACTCAGTGAGTACATGGGAAATCACGAAAGTGCCCCTACGTTGCTCACATTTCTTTTTTCTTTCTTCCGTCGGCGACTTGTCAGATTTTTGCCCCCACTCCACTCTTCTTCATACTTCTAATTATTCCCCCTTTCCGAAATTACGGATCTACCCCTCTTTTCCACCGCCGGAATCGGGTAATTTTCCGGCCACTTTCTAAAAATTGCCCTAATACCCATTCCGGCCAATGATGTAATGAGACGACCCATTTCCCCTTTTCTCCAAATGGGTGACCTTTGTTGGACGCAGCAAATGGGTCCAAAAGAGAGTGGGCGGTAGTCTAAAAGGGGCATTTTGGTAATTTAATGAGTACACAAAACCAGTGTAAAGAGTCAAAGCCATTGGCATTGGCCCCAATAATAACTCCACCTGGAATATGGATTATCCTCCAAAATAATAGTCAAACCCTAGACTCCACCACAAGGGTCATTTTCGTCATTTCACTTCGAAAGCCGAAAGGGCCCCTCTTTATCGGTGGCGTGTTTCCGTGGCAACGAAGTCTGTGTGCAAATGGTGTTGGTGGTTGTGCCCTTTTTTTATGTGTTGGCTTATGAAGATTATACCCCAATAAATGATTCAATGCGGTCAGTTGCACCTTTACCTTCCTAGATTTGCTTCATCTCTACCCTTCCTTTCCCCTAATCAGACAAAACCTCTGCTTTTTAATGGCTTAGAGAAAACAGATTCCCATGAGACAGCCTGTGATCCTAAACTTTCCCCCCTTCTTATGAAACATAAATCTGTGTCCGGAAAATTGTACAACAATGTTTTTTTCAGACCACCCTGCTCGGTTTTGGTGAACCACCCTTGTCTGGTTTTGTCGACTCCCACAAAACATTCCTGGTAAGGGTATAGAAACTTTCTCTATAGCAAGCGACAACACATAACAATATCTACCGGAGGTGGACTAGGACTAGTGCTGTTATAAATGGTATTAGAGTCAAATGTCGAGCGTGTGCCAGCAAGAATGTCGGGTCCCAATGTGTGGATTGTGAGATCCCACCTCGGTTAGAGAGGGGTTAGAGAGGGGAACAAAACATTCCTTATAAGTGTGTGGAAATCTCTCCCGGATAAACTCATTTTAAAACTGTAAAAGAATCAAACTTTCGAAATGGGTTAGTTCTTGATTTGGTTGTATTAGTGGATATGATTAGTAATTAGGATTATAACCATTGTAATTAGACGCATGGTTGAAAACTAAGTGATGGATGGGTTATGAATGGTATATGTGCAGATTGGTTGCAAGAGTGAAGTAGTTGGAACAATGAAGAGGCCAAGAAAGAAAAAGGTACCATTTTTATTCTTTCTTTCTTTGTTTTATTCCTTCCTTTTTGGGAGCTTCATGGGCCATATAACATTCATATGGTGGATAGCAGACACTGGGAGAGCTTAAAGAGGAGGAGGCTCTGCTATTAAAGGAAAGGAGAAGCTTGAAAGATGTATGTTTTTGTTGGTATGAACATGAAACTTGTTCATCTTCGTGGCCTTCTTGCTTAAGCTGTTTCCTTTTATAAGCACAGGCCTTGGCTACCTTGCGGGTCACTGTGGAAAAACAGAGGGATATTAATGGAAGCTTGAAGAAAATGAAGGTGAATCTTCGTGTTGGGGTTTTCTTGCTTTGAATATGTGTTCTTAACTCGGTCGTTCAAGGGTTTCTCTCTTTATTGAATGCTATTGGGAAGCTTGCATTTACTTCTTTATCTGCTGCAAATTATGTCTGAAAAGCTGCTGTTCTTTCTCTTGCTTTTGCCCTTTTTATTATGTCCTTTTCTGCTGATGTTTGCATCATGTAGAGAGATTTGGTCTAATGGCTTGTTTGAGTGTTTGCTGAACTGTTTGTGTGAGATCCCATTTGGTTGGAGACGGGAACATAGCATTCTTTATAAGGGTTTGGAAACCTGTCCCTAGAAGGCGGTTTTAAAAACCTTGAGGGCAAGTCTTAAAGGGGAAGTCTAAAGAAAACAATATCTGCTAGCGGTGGGCTTGGGCTTGAGCTTGAGCTGTTACAAATAGGATCAGAGTCAACTCTGGGCGATATGTCAGCGAGGAGGCTGAGTCATGAAGGGGGGTGGACACAAGGCGGTGTGCCAACAAGGAGGAGGTTGAGCCACGAAAGGGTGTGGACATGAGGTGGTGTACCAGTGAGGATGTTGGGGCCCGAAGGAGGGTGGATTGGGGGGTCCCACATTGATTGGAGAAGGCGAGTGCCAGTGAGGACGTTGGGGCTCGAAGGGGGGTGGATTGTGAGATCCCGCATCGGTTGGGGAGGAAAATGAAACATTCTTTATAAGGGCGTGGAAACCTCCCCAACCTCTCCCTATCAGATGCGTTTTAAAAACCTTGAAGGAAAACTCGAAAAGGAAATCTCAAATAAGACAATATCTGCTAGTGGTGAGTTTGAGCTGATATTGTCCTCTTTGGGTCCCTTCTGAGCTTCCCCTCAAAGTTTTAAAATGCGTTTGCTAGGGAGAAGTTTTCACGTCTTTATAAAGAATGCTTCGGATCTCACGAATTTAGTTTCGGAAAAGATGTTCATTATAACAAAGCTCGAGGTTGATTCTAAGATAACAAGCAAGAAGAGAAGCCAAAGAAAGTTGTTCTGATTCAGTGCGGTTTTGGCAACAGATGAACTTCGTAGCGTTGAAACGAGCTGAGAAAGAGAAAACTATTGACATCATTTTACATTGAAAGCTTAAACTGATCTTAATAACTAGAATGCTGTTTTGATGAATAGATAATGTGTTGCAGAAGCTAAAGTTGTTCTGTTTGAAATTCTACAGCTTGAACTCGAATTACAGCAAGGGTCGACCATTCCAGCCGAGGAAAATTCCGACCAACCGCAACTGCAGAAGCTACCGAAATCTATATGCAACACTACACCCATCGGAGTTGCTGCATTCGGTTGCAACGGCGTCGATGCTTCTTACCAATTAACACTGCCAAACGTTTCTTGCAAACTGCAGGAGATGGGAACTTTAGGGACTGTCCGTTTATTACCTGATCTTAATTTGCCTTTTCAGGACGATTCTGGCGCCGAGGCCTTGTACCGAATGAGCTAGGAACATTCAACCGAAACGAACAAATATTAAGCTACCTTAACTGAAAGGGACAAAGATCGACAACAACAACGACAACAACGATGTAGTTCCTAAATTCTAACCCTGTCATAGGCTCGAGTTACTTGTAACTGTAATTACAAAACCAATTTTCTCAGCTGCATATTCATATAACATCTTTTTTTCCCTTTTTATAGTACCCGAAAAAGATCGAGAACGGAACCATGTAGAGACCTCGAAACCCCTTTAGCTGTTTAGTTATATTATGTATTCACAGGCTTCTGCATCTGGTTATATAAAAGAGGTTGATTATGAACATTGTAATTACTGGATAAATGCAAACAGAGGAAGATCCATTGAGATCAAATGGCC NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAGCCCCCCCCCCCTCCCTCTCTCTCTCTCTTCATCGCCGCCGCTATTTCCACCATGTCCGACGAGGAATGGGTCAACGTTGCCCTCTCCGATGACTCTCTTGTCGTCGACTTACTTCTTCGTCTCAACCGCCCTCCCCCTCTGAATCCTCTCTTTCCCCCTCTCCGACTTGACTGGTCTGTCCGCCAGCCTCGTTCCAAGTCCATTCTTACCCGCCATGCCTCCGATTCTGCCGGAAAGAACTTTGATGCCGCCGCAAGAGCTAGTCCGACCACTCCTCTCACTTGGAGCAGCGGCGGCTGTGGTGGTGGCGCTACCTCCATCAGCGGCGGATTCGTCGACGCATCCGACGCCGCAAGATCTAAGATTGGTTGCAAGAGTGAAGTAGTTGGAACAATGAAGAGGCCAAGAAAGAAAAAGACACTGGGAGAGCTTAAAGAGGAGGAGGCTCTGCTATTAAAGGAAAGGAGAAGCTTGAAAGATGCCTTGGCTACCTTGCGGGTCACTGTGGAAAAACAGAGGGATATTAATGGAAGCTTGAAGAAAATGAAGCTTGAACTCGAATTACAGCAAGGGTCGACCATTCCAGCCGAGGAAAATTCCGACCAACCGCAACTGCAGAAGCTACCGAAATCTATATGCAACACTACACCCATCGGAGTTGCTGCATTCGGTTGCAACGGCGTCGATGCTTCTTACCAATTAACACTGCCAAACGTTTCTTGCAAACTGCAGGAGATGGGAACTTTAGGGACTGTCCGTTTATTACCTGATCTTAATTTGCCTTTTCAGGACGATTCTGGCGCCGAGGCCTTGTACCGAATGAGCTAGGAACATTCAACCGAAACGAACAAATATTAAGCTACCTTAACTGAAAGGGACAAAGATCGACAACAACAACGACAACAACGATGTAGTTCCTAAATTCTAACCCTGTCATAGGCTCGAGTTACTTGTAACTGTAATTACAAAACCAATTTTCTCAGCTGCATATTCATATAACATCTTTTTTTCCCTTTTTATAGTACCCGAAAAAGATCGAGAACGGAACCATGTAGAGACCTCGAAACCCCTTTAGCTGTTTAGTTATATTATGTATTCACAGGCTTCTGCATCTGGTTATATAAAAGAGGTTGATTATGAACATTGTAATTACTGGATAAATGCAAACAGAGGAAGATCCATTGAGATCAAATGGCC ATGTCCGACGAGGAATGGGTCAACGTTGCCCTCTCCGATGACTCTCTTGTCGTCGACTTACTTCTTCGTCTCAACCGCCCTCCCCCTCTGAATCCTCTCTTTCCCCCTCTCCGACTTGACTGGTCTGTCCGCCAGCCTCGTTCCAAGTCCATTCTTACCCGCCATGCCTCCGATTCTGCCGGAAAGAACTTTGATGCCGCCGCAAGAGCTAGTCCGACCACTCCTCTCACTTGGAGCAGCGGCGGCTGTGGTGGTGGCGCTACCTCCATCAGCGGCGGATTCGTCGACGCATCCGACGCCGCAAGATCTAAGATTGGTTGCAAGAGTGAAGTAGTTGGAACAATGAAGAGGCCAAGAAAGAAAAAGACACTGGGAGAGCTTAAAGAGGAGGAGGCTCTGCTATTAAAGGAAAGGAGAAGCTTGAAAGATGCCTTGGCTACCTTGCGGGTCACTGTGGAAAAACAGAGGGATATTAATGGAAGCTTGAAGAAAATGAAGCTTGAACTCGAATTACAGCAAGGGTCGACCATTCCAGCCGAGGAAAATTCCGACCAACCGCAACTGCAGAAGCTACCGAAATCTATATGCAACACTACACCCATCGGAGTTGCTGCATTCGGTTGCAACGGCGTCGATGCTTCTTACCAATTAACACTGCCAAACGTTTCTTGCAAACTGCAGGAGATGGGAACTTTAGGGACTGTCCGTTTATTACCTGATCTTAATTTGCCTTTTCAGGACGATTCTGGCGCCGAGGCCTTGTACCGAATGAGCTAG MSDEEWVNVALSDDSLVVDLLLRLNRPPPLNPLFPPLRLDWSVRQPRSKSILTRHASDSAGKNFDAAARASPTTPLTWSSGGCGGGATSISGGFVDASDAARSKIGCKSEVVGTMKRPRKKKTLGELKEEEALLLKERRSLKDALATLRVTVEKQRDINGSLKKMKLELELQQGSTIPAEENSDQPQLQKLPKSICNTTPIGVAAFGCNGVDASYQLTLPNVSCKLQEMGTLGTVRLLPDLNLPFQDDSGAEALYRMS Homology
BLAST of CmaCh17G008860 vs. ExPASy TrEMBL
Match: A0A6J1JT79 (uncharacterized protein LOC111488119 isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111488119 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 7.9e-138 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of CmaCh17G008860 vs. ExPASy TrEMBL
Match: A0A6J1JV44 (uncharacterized protein LOC111488119 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111488119 PE=4 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 1.9e-136 Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of CmaCh17G008860 vs. ExPASy TrEMBL
Match: A0A6J1GQQ9 (uncharacterized protein LOC111456207 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456207 PE=4 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 8.4e-132 Identity = 252/261 (96.55%), Postives = 254/261 (97.32%), Query Frame = 0
BLAST of CmaCh17G008860 vs. ExPASy TrEMBL
Match: A0A6J1GPA3 (uncharacterized protein LOC111456207 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456207 PE=4 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 2.1e-130 Identity = 252/262 (96.18%), Postives = 254/262 (96.95%), Query Frame = 0
BLAST of CmaCh17G008860 vs. ExPASy TrEMBL
Match: A0A6J1KVJ7 (uncharacterized protein LOC111497981 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497981 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 8.0e-90 Identity = 191/264 (72.35%), Postives = 212/264 (80.30%), Query Frame = 0
BLAST of CmaCh17G008860 vs. NCBI nr
Match: XP_022991535.1 (uncharacterized protein LOC111488119 isoform X5 [Cucurbita maxima]) HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of CmaCh17G008860 vs. NCBI nr
Match: XP_022991534.1 (uncharacterized protein LOC111488119 isoform X4 [Cucurbita maxima]) HSP 1 Score: 495.0 bits (1273), Expect = 4.0e-136 Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of CmaCh17G008860 vs. NCBI nr
Match: KAG6575620.1 (hypothetical protein SDJN03_26259, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 481.5 bits (1238), Expect = 4.6e-132 Identity = 252/263 (95.82%), Postives = 255/263 (96.96%), Query Frame = 0
BLAST of CmaCh17G008860 vs. NCBI nr
Match: XP_022953784.1 (uncharacterized protein LOC111456207 isoform X2 [Cucurbita moschata] >KAG7014171.1 hypothetical protein SDJN02_24345 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 479.6 bits (1233), Expect = 1.7e-131 Identity = 252/261 (96.55%), Postives = 254/261 (97.32%), Query Frame = 0
BLAST of CmaCh17G008860 vs. NCBI nr
Match: XP_023548547.1 (uncharacterized protein LOC111807180 isoform X5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 478.4 bits (1230), Expect = 3.9e-131 Identity = 250/259 (96.53%), Postives = 254/259 (98.07%), Query Frame = 0
BLAST of CmaCh17G008860 vs. TAIR 10
Match: AT1G80610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 2.1e-26 Identity = 89/204 (43.63%), Postives = 109/204 (53.43%), Query Frame = 0
BLAST of CmaCh17G008860 vs. TAIR 10
Match: AT1G15800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25 Identity = 85/214 (39.72%), Postives = 118/214 (55.14%), Query Frame = 0
BLAST of CmaCh17G008860 vs. TAIR 10
Match: AT4G32030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19 Identity = 98/274 (35.77%), Postives = 134/274 (48.91%), Query Frame = 0
BLAST of CmaCh17G008860 vs. TAIR 10
Match: AT4G32030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 72.8 bits (177), Expect = 4.6e-13 Identity = 69/158 (43.67%), Postives = 88/158 (55.70%), Query Frame = 0
BLAST of CmaCh17G008860 vs. TAIR 10
Match: AT5G25210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09 Identity = 43/122 (35.25%), Postives = 70/122 (57.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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