CmaCh17G008150 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G008150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein SYS1 homolog
Location	Cma_Chr17: 6394813 .. 6396820 (+)
RNA-Seq Expression	CmaCh17G008150
Synteny	CmaCh17G008150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTATGGTGCAGTTGTATGGGACCCTTGGCTCATCGTTGCCCAAATTGTTTGCCTTCAATGTTTGTATTACCTCACTCTTGGTATATTGATCGCGACTCTAGTCGGTACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACCGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGATAAGTGCGCTTGCTGGGTAAGAAATCTGTTTTAGCTTTCATCCCCATAATATTTGGTATTATGTTTATTTACAATGCATGGTTAGGAATAGTTGATAAATCTCAAACGTGTTTGTCTACCCAGCTTTTATTTATTAAAGGTTAAATCTACTTAGCCGCATGCTAATATAACATTACCCTTGGTTTGGAGAAGTTGTAGTTTATGGAGACTTTGTGTGAGATCCCACTTCGTTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCCGCTTTTTAAAATCTTGAAGGAAGCCCGAAAGGGAAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGAGGTGGGTTTGAGCCATTACACTTTGTTAGATTATTTAGATATTGAATAGAATAATCACCCTCGCTGAAATGGTTTTGATAGTTAACAATGAAAATGGCTTGTTTTGAATGTCATATAAATGTTTGCTTTTTTATCTCTACGTTATGTAATGAGGCAATTTTTGTGGTAAACTATAACTGCAGATAACTCTTTGGTGTCCGAAGTTTCTTTCTTAATGGTTTGTAGTATCCTATTTGTTGTTCTGTCAGCAATTGTTGTGAATTTCAATTAAGGTCCATGTGTATGTACTAGCTGGCTAGCTACTTTTTTTTCTTGATTTCCCATCTCCTAAATCCCTGTTAGCCGATTTGGAGAAATATGTTGTTATTGCTCTTTTAAACGTAGTCCGTTACTATCACAAAAATTCACATGTTCAATATTTTGGGTTTGTTCAGTCTAATTGTTATAATTTCTATTTAAATTGCTGATGATCAACCATACATATAGAAAATCTACGAATGGAGTATGCGTTGTTTTGAATATGTAGGCAGTGGATGGTGTCATGCTTTTTATTTCAATTTCTGGGCAGATGCTGGCAGTTTTTCTTCCTTGGGATTTTTCGTTTAGAACGTGTAGGCGATGAATTGGGGGCCGGGGGTGGTTGAAGGATAGCAACATAGTTTTGGAGCACTACCAACTAATAGATATTGTTTCTGTTAAATGTTTCCCTGAGCGGCACTTATTAGTGTTTGTTTATTTTTCCTTGTGCTTGACACAATCGCTGGTAAATGGTTTCAAATTAACCATTTTTTATCTTTTTTCTTCGTTTTTCATATTGTTTATACAAAACTCGTGTCCGCTTCTCTCACCGTTACATTTTTTCTTGTCATGCAGAGCAGTATATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATACTCCACCTTTTCATCTGTATCGTTTATGGAGGGTGGCCGTCCTCAATGACATGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTGTGCATCAAACGTGAACTGCGAGAAATTCCTATAACACGATTGCGTTCAAGTAAGACTTCTCTCCTCAAAGAAATTAACAAATCTTCTTTGACATTCATATTGTTGGAATTCACAATTCATAGTACTAACTAACATGACTGCCAAAACAAAACATGCTAGTACAAAAATTTTAATTCATGTTAGCCTCATAGGCTTTGCAGTTGAGTTAAGATGCTCTGATTTGTACACCAAAGGGTTACTCTTTAGTTTTTGGGAAAAGATGGTCCTCTTGTTTAAGATCACTGTGCATATTTTGGTGCAGATGTCTGAGCAAGTAACAGTCAAATTGCAAGAACCACCTCTTCATGTGTGTGATTTTTTGGTGGCCTATCTTATTAAATTTGCGTAG

mRNA sequence

ATGTTCTATGGTGCAGTTGTATGGGACCCTTGGCTCATCGTTGCCCAAATTGTTTGCCTTCAATGTTTGTATTACCTCACTCTTGGTATATTGATCGCGACTCTAGTCGGTACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACCGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGATAAGTGCGCTTGCTGGAGCAGTATATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATACTCCACCTTTTCATCTGTATCGTTTATGGAGGGTGGCCGTCCTCAATGACATGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTGTGCATCAAACGTGAACTGCGAGAAATTCCTATAACACGATTGCGTTCAAGGTTACTCTTTAGTTTTTGGGAAAAGATGGTCCTCTTGTTTAAGATCACTGTGCATATTTTGGTGCAGATGTCTGAGCAAGTAACAGTCAAATTGCAAGAACCACCTCTTCATGTGTGTGATTTTTTGGTGGCCTATCTTATTAAATTTGCGTAG

Coding sequence (CDS)

ATGTTCTATGGTGCAGTTGTATGGGACCCTTGGCTCATCGTTGCCCAAATTGTTTGCCTTCAATGTTTGTATTACCTCACTCTTGGTATATTGATCGCGACTCTAGTCGGTACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACCGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGATAAGTGCGCTTGCTGGAGCAGTATATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATACTCCACCTTTTCATCTGTATCGTTTATGGAGGGTGGCCGTCCTCAATGACATGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTGTGCATCAAACGTGAACTGCGAGAAATTCCTATAACACGATTGCGTTCAAGGTTACTCTTTAGTTTTTGGGAAAAGATGGTCCTCTTGTTTAAGATCACTGTGCATATTTTGGTGCAGATGTCTGAGCAAGTAACAGTCAAATTGCAAGAACCACCTCTTCATGTGTGTGATTTTTTGGTGGCCTATCTTATTAAATTTGCGTAG

Protein sequence

MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSRLLFSFWEKMVLLFKITVHILVQMSEQVTVKLQEPPLHVCDFLVAYLIKFA

Homology

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BLAST of CmaCh17G008150 vs. ExPASy Swiss-Prot
Match: Q55E69 (Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.2e-27
Identity = 60/147 (40.82%), Postives = 97/147 (65.99%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFY    WDP LI+ QI+ +QCLYY+ L  ++  L     S +SL   F+Y +I   + +
Sbjct: 1   MFYKYNAWDPKLIIGQILSIQCLYYILLAGILYLLDSMFSSSLSLEQMFEYQSINTHSQS 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           G  V+ +FLI++L G+  L Y++ER+KKCLD +AT+  +H  I  +  G+P ++ WW + 
Sbjct: 61  GRVVMTAFLINSLFGSFCLKYIVERSKKCLDHSATVTFIHFIIVWIVSGFPKTVVWWAIQ 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITR 148
             G+V+M+++GEYLC+++EL +IP+ R
Sbjct: 121 LIGMVIMAMIGEYLCMRKELMDIPLQR 147

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BLAST of CmaCh17G008150 vs. ExPASy Swiss-Prot
Match: A7S6Y0 (Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.8e-25
Identity = 55/140 (39.29%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 7   VWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGWCVIA 66
           VWDP LI++QI+ +QC +Y++LG+ +  +     S  SL  FF Y  + +S+  G  ++ 
Sbjct: 9   VWDPVLIISQIIAIQCTFYISLGVWVLIVDYWSGSIHSLDQFFAYKELDISSLKGKLLMI 68

Query: 67  SFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVNGTGLVV 126
           +F +++L GA+ L ++++RAK+CLDF  T +I+HL  C +Y G+P S TWW++N   L +
Sbjct: 69  AFCLNSLTGAMALWFIVKRAKQCLDFTTTAHIVHLVFCCIYAGFPFSWTWWLLNIICLAL 128

Query: 127 MSLLGEYLCIKRELREIPIT 147
           M+++GE++C+K EL+ I ++
Sbjct: 129 MAVIGEFVCMKTELKAIKVS 148

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BLAST of CmaCh17G008150 vs. ExPASy Swiss-Prot
Match: Q8N2H4 (Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.8e-23
Identity = 60/144 (41.67%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 3   YGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGW 62
           + + VWDP LI++QIV +Q +YY +LG+ +A + G   S  SL   FD   +  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGG-WPSSMTWWVVNG 122
             + SF+++AL  A+ L+Y I R K+CLDF  T++  HL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPI 146
             + +M+++GEYLC++ EL+EIP+
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPL 148

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BLAST of CmaCh17G008150 vs. ExPASy Swiss-Prot
Match: A4K2N5 (Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.8e-23
Identity = 60/144 (41.67%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 3   YGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGW 62
           + + VWDP LI++QIV +Q +YY +LG+ +A + G   S  SL   FD   +  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGG-WPSSMTWWVVNG 122
             + SF+++AL  A+ L+Y I R K+CLDF  T++  HL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPI 146
             + +M+++GEYLC++ EL+EIP+
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPL 148

[Close]

BLAST of CmaCh17G008150 vs. ExPASy Swiss-Prot
Match: A4K2W1 (Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.8e-23
Identity = 60/144 (41.67%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 3   YGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTATGW 62
           + + VWDP LI++QIV +Q +YY +LG+ +A + G   S  SL   FD   +  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGG-WPSSMTWWVVNG 122
             + SF+++AL  A+ L+Y I R K+CLDF  T++  HL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPI 146
             + +M+++GEYLC++ EL+EIP+
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPL 148

[Close]

BLAST of CmaCh17G008150 vs. ExPASy TrEMBL
Match: A0A6J1JZ66 (Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.1e-76
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. ExPASy TrEMBL
Match: A0A6J1GPI7 (Protein SYS1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455962 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.7e-76
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL+SALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. ExPASy TrEMBL
Match: A0A6J1CPG7 (Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.1e-73
Identity = 141/152 (92.76%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG VVWDPWLIVAQIVC+QCLYY+TLGIL+ATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL+SALAGA YLVYLIERAKKCLDF+ATLYI+HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. ExPASy TrEMBL
Match: A0A0A0KC23 (Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.3e-73
Identity = 142/152 (93.42%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQC YYLTLGIL+ATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL+SA+AGA YLVYLIERAKKCLDFAATLYI HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. ExPASy TrEMBL
Match: A0A1S3CGS5 (Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.6e-72
Identity = 142/152 (93.42%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGA VWDPWLIVAQIVCLQC YYLTLGI +ATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL+SA+AGA YLVYLIERAKKCLDFAATLYI HLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. NCBI nr
Match: XP_022992428.1 (protein SYS1 homolog [Cucurbita maxima])

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. NCBI nr
Match: XP_022953394.1 (protein SYS1 homolog [Cucurbita moschata] >KAG7014094.1 Protein SYS1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL+SALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. NCBI nr
Match: XP_023547444.1 (protein SYS1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 2.4e-75
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL+SALAGAVYL+YLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAVYLIYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. NCBI nr
Match: XP_038898906.1 (protein SYS1 homolog [Benincasa hispida])

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-73
Identity = 144/152 (94.74%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCLYYLTLGIL+ATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL+SA+AGA YLVYLIERAKKCLDFAATLYI HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. NCBI nr
Match: XP_022143685.1 (protein SYS1 homolog [Momordica charantia])

HSP 1 Score: 284.3 bits (726), Expect = 8.4e-73
Identity = 141/152 (92.76%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG VVWDPWLIVAQIVC+QCLYY+TLGIL+ATLVGTRVSRISLVYFFDYATITVSTAT
Sbjct: 1   MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GWCVIASFL+SALAGA YLVYLIERAKKCLDF+ATLYI+HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGLVVMSLLGEYLCIKRELREIPITRLRS +
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CmaCh17G008150 vs. TAIR 10
Match: AT1G79990.2 (structural molecules )

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-62
Identity = 112/152 (73.68%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+     +G RV R+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GW VIASFL S+LAGAVY+++L+ERA+KCLDF+ATLYI+HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGL VM+LL EYLCIKRE REIP+ R  SR+
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

[Close]

BLAST of CmaCh17G008150 vs. TAIR 10
Match: AT1G79990.4 (structural molecules )

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-62
Identity = 112/152 (73.68%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+     +G RV R+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GW VIASFL S+LAGAVY+++L+ERA+KCLDF+ATLYI+HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSRL 153
           GTGL VM+LL EYLCIKRE REIP+ R  SR+
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

[Close]

BLAST of CmaCh17G008150 vs. TAIR 10
Match: AT1G79990.1 (structural molecules )

HSP 1 Score: 234.6 bits (597), Expect = 7.1e-62
Identity = 111/150 (74.00%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+     +G RV R+SLVYFFDYAT+T ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120
           GW VIASFL S+LAGAVY+++L+ERA+KCLDF+ATLYI+HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRS 151
           GTGL VM+LL EYLCIKRE REIP+ R  S
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHS 150

The following BLAST results are available for this feature:

BLAST of CmaCh17G008150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55E69	4.2e-27	40.82	Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1	[more]
A7S6Y0	8.8e-25	39.29	Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1	[more]
Q8N2H4	4.8e-23	41.67	Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1	[more]
A4K2N5	4.8e-23	41.67	Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1	[more]
A4K2W1	4.8e-23	41.67	Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1	[more]

BLAST of CmaCh17G008150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZ66	5.1e-76	98.68	Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1	[more]
A0A6J1GPI7	8.7e-76	98.03	Protein SYS1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455962 PE=3 SV=1	[more]
A0A6J1CPG7	4.1e-73	92.76	Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1	[more]
A0A0A0KC23	5.3e-73	93.42	Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1	[more]
A0A1S3CGS5	2.6e-72	93.42	Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1	[more]

BLAST of CmaCh17G008150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992428.1	1.1e-75	98.68	protein SYS1 homolog [Cucurbita maxima]	[more]
XP_022953394.1	1.8e-75	98.03	protein SYS1 homolog [Cucurbita moschata] >KAG7014094.1 Protein SYS1-like protei...	[more]
XP_023547444.1	2.4e-75	97.37	protein SYS1 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_038898906.1	1.3e-73	94.74	protein SYS1 homolog [Benincasa hispida]	[more]
XP_022143685.1	8.4e-73	92.76	protein SYS1 homolog [Momordica charantia]	[more]

BLAST of CmaCh17G008150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79990.2	1.9e-62	73.68	structural molecules	[more]
AT1G79990.4	1.9e-62	73.68	structural molecules	[more]
AT1G79990.1	7.1e-62	74.00	structural molecules	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019185	Integral membrane protein SYS1-related	PFAM	PF09801	SYS1	coord: 5..144 e-value: 4.7E-45 score: 153.3
IPR019185	Integral membrane protein SYS1-related	PANTHER	PTHR12952	SYS1	coord: 1..154
None	No IPR available	PANTHER	PTHR12952:SF3	PROTEIN SYS1 HOMOLOG	coord: 1..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G008150.1	CmaCh17G008150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006895	Golgi to endosome transport
biological_process	GO:0043001	Golgi to plasma membrane protein transport
biological_process	GO:0034067	protein localization to Golgi apparatus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0030173	integral component of Golgi membrane
cellular_component	GO:0005802	trans-Golgi network